NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F089997

Metagenome / Metatranscriptome Family F089997

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089997
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 49 residues
Representative Sequence SVHIADADPDFRMVFSVNGEHEQQKVFSIRLHESTAFASVTMLGTTEHE
Number of Associated Samples 95
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.93 %
% of genes near scaffold ends (potentially truncated) 97.22 %
% of genes from short scaffolds (< 2000 bps) 86.11 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(11.111 % of family members)
Environment Ontology (ENVO) Unclassified
(29.630 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.519 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.90%    β-sheet: 32.47%    Coil/Unstructured: 63.64%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF01678DAP_epimerase 85.19
PF02016Peptidase_S66 7.41
PF01225Mur_ligase 1.85
PF08245Mur_ligase_M 1.85
PF04613LpxD 0.93
PF01553Acyltransferase 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0253Diaminopimelate epimeraseAmino acid transport and metabolism [E] 85.19
COG1619Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling)Cell wall/membrane/envelope biogenesis [M] 7.41
COG0769UDP-N-acetylmuramyl tripeptide synthaseCell wall/membrane/envelope biogenesis [M] 1.85
COG0770UDP-N-acetylmuramyl pentapeptide synthaseCell wall/membrane/envelope biogenesis [M] 1.85
COG0773UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl familyCell wall/membrane/envelope biogenesis [M] 1.85
COG1044UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferaseCell wall/membrane/envelope biogenesis [M] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001137|JGI12637J13337_1015519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium661Open in IMG/M
3300001356|JGI12269J14319_10178306All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300001593|JGI12635J15846_10285693All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300002245|JGIcombinedJ26739_100284957All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1537Open in IMG/M
3300002914|JGI25617J43924_10281931All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300004082|Ga0062384_100119143All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1446Open in IMG/M
3300004082|Ga0062384_100826384All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium649Open in IMG/M
3300004091|Ga0062387_100207769All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1188Open in IMG/M
3300004092|Ga0062389_102761381All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300005445|Ga0070708_100231727All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1733Open in IMG/M
3300005591|Ga0070761_10206031All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300005712|Ga0070764_10126914All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1385Open in IMG/M
3300006059|Ga0075017_100968445All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium662Open in IMG/M
3300006864|Ga0066797_1294092All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300006893|Ga0073928_10040099All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4348Open in IMG/M
3300009038|Ga0099829_10562061All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300009088|Ga0099830_11762391All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300009143|Ga0099792_10132421All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300009518|Ga0116128_1072487All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300009524|Ga0116225_1009529All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5377Open in IMG/M
3300009547|Ga0116136_1095556All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium776Open in IMG/M
3300009624|Ga0116105_1119113All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300009628|Ga0116125_1085479All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300009643|Ga0116110_1114282All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300009644|Ga0116121_1241748All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300010339|Ga0074046_10154884All Organisms → cellular organisms → Bacteria1460Open in IMG/M
3300011269|Ga0137392_10204128All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1617Open in IMG/M
3300012096|Ga0137389_10299183All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1362Open in IMG/M
3300012202|Ga0137363_10105695All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2148Open in IMG/M
3300012202|Ga0137363_11806531All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300012362|Ga0137361_10355982All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1343Open in IMG/M
3300012923|Ga0137359_10878998All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300014164|Ga0181532_10622459All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300014167|Ga0181528_10183237All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300014169|Ga0181531_11100531All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300014199|Ga0181535_10095905All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1918Open in IMG/M
3300014200|Ga0181526_10113630All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1732Open in IMG/M
3300014490|Ga0182010_10092582All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1503Open in IMG/M
3300014495|Ga0182015_10263534All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300014838|Ga0182030_11029900All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300017823|Ga0187818_10001038All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis10948Open in IMG/M
3300017933|Ga0187801_10141195All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300017948|Ga0187847_10057718All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2195Open in IMG/M
3300017972|Ga0187781_10575127All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium811Open in IMG/M
3300018008|Ga0187888_1335766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300018012|Ga0187810_10273207All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium696Open in IMG/M
3300018022|Ga0187864_10250671All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300018042|Ga0187871_10762167All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300018046|Ga0187851_10030102All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3707Open in IMG/M
3300018047|Ga0187859_10035829All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2668Open in IMG/M
3300018086|Ga0187769_10811066All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300018090|Ga0187770_10522599All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300019787|Ga0182031_1485896All Organisms → cellular organisms → Bacteria1386Open in IMG/M
3300019788|Ga0182028_1118510All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300020581|Ga0210399_10199033All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1665Open in IMG/M
3300021402|Ga0210385_11501113All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300021405|Ga0210387_10754543All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300021433|Ga0210391_10097662All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2317Open in IMG/M
3300021433|Ga0210391_10263605All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1352Open in IMG/M
3300021861|Ga0213853_10634385All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium664Open in IMG/M
3300021861|Ga0213853_11253633All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300023259|Ga0224551_1000249All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7860Open in IMG/M
3300025414|Ga0208935_1033981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300025434|Ga0208690_1076935All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300025448|Ga0208037_1007665All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3241Open in IMG/M
3300025496|Ga0208191_1012706All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2261Open in IMG/M
3300025509|Ga0208848_1100518All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300026273|Ga0209881_1172155All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300026320|Ga0209131_1070817All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1905Open in IMG/M
3300026482|Ga0257172_1042588All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300026507|Ga0257165_1029550All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300026557|Ga0179587_10153837All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1435Open in IMG/M
3300026557|Ga0179587_10872696All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium593Open in IMG/M
3300027064|Ga0208724_1033378All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300027432|Ga0209421_1010840All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1716Open in IMG/M
3300027591|Ga0209733_1134565All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300027625|Ga0208044_1066687All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300027641|Ga0208827_1167474All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300027674|Ga0209118_1004925All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5131Open in IMG/M
3300027674|Ga0209118_1010960All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3088Open in IMG/M
3300027698|Ga0209446_1088910All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300027767|Ga0209655_10313766All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300027862|Ga0209701_10328112All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300027898|Ga0209067_10135810All Organisms → cellular organisms → Bacteria → Acidobacteria1298Open in IMG/M
3300028678|Ga0302165_10019846All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1839Open in IMG/M
3300028780|Ga0302225_10247365All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300028780|Ga0302225_10392410All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300028798|Ga0302222_10038980All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1936Open in IMG/M
3300029903|Ga0247271_122266All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium719Open in IMG/M
3300029919|Ga0302141_1153418All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300029919|Ga0302141_1205909All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300029993|Ga0302304_10367223All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300029999|Ga0311339_11413087All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium624Open in IMG/M
3300030007|Ga0311338_10690876All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300030007|Ga0311338_10896250All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300030520|Ga0311372_11107995All Organisms → cellular organisms → Bacteria1028Open in IMG/M
3300030520|Ga0311372_13056443All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300030838|Ga0311335_11052253All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300031525|Ga0302326_10788673All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1371Open in IMG/M
3300031525|Ga0302326_11611347All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300031720|Ga0307469_10344090All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1249Open in IMG/M
3300031726|Ga0302321_103028540All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300031754|Ga0307475_10039461All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3487Open in IMG/M
3300031754|Ga0307475_10112964All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2131Open in IMG/M
3300031754|Ga0307475_10587238All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300031823|Ga0307478_10425630All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300032205|Ga0307472_100503309All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300034282|Ga0370492_0316872All Organisms → cellular organisms → Bacteria633Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.11%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa10.19%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland9.26%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.48%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland5.56%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil5.56%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.56%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.63%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.70%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.78%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.78%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.78%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds1.85%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.85%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.85%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.85%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.85%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.85%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.93%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.93%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.93%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001137Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009547Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40EnvironmentalOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009628Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009644Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019788Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023259Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24EnvironmentalOpen in IMG/M
3300025414Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025434Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025448Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025496Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025509Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300026273Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026507Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-BEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027064Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)EnvironmentalOpen in IMG/M
3300027432Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027641Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028678Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300029903Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703EnvironmentalOpen in IMG/M
3300029919Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2EnvironmentalOpen in IMG/M
3300029993Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030838I_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12637J13337_101551913300001137Forest SoilRVVFSADGELEQQKVFALRLHESTAFATVTTIGTTEHE*
JGI12269J14319_1017830613300001356Peatlands SoilRMVFSVDGERDEQSVFSIRLHQSAAFATVTTLGTTEHE*
JGI12635J15846_1028569313300001593Forest SoilVVSIDGEREQQKIFSIRLHESNVFATVTTLGATEHE*
JGIcombinedJ26739_10028495733300002245Forest SoilDPDFRLVFAVNCEQEQQKVLSILLHESNAFATVTALGTVEHE*
JGI25617J43924_1028193123300002914Grasslands SoilESVHIADADPDFRMVFSVNGEHEQQKVFSIRLHESTSFASVTTLATTEHE*
Ga0062384_10011914333300004082Bog Forest SoilSVHIASGEPDFRIVFSVNCEYDQQKVFSIRLHESPAFASVTSLGSTEHE*
Ga0062384_10082638423300004082Bog Forest SoilLTMHSMHIAHAEPDFRVVISVDGELNEQNVFSIRLHESNAFATVTTLGTTEHE*
Ga0062387_10020776933300004091Bog Forest SoilDADPDFRMVFSVDGEREQQNVFSIRLHESSAFATVSTLGTTEHE*
Ga0062389_10276138123300004092Bog Forest SoilSVHIANADPDFRMVFSVDGEGEPPSVFSIRLHESTAFATVTTLGTTEHE*
Ga0070708_10023172733300005445Corn, Switchgrass And Miscanthus RhizosphereTMHSVHIASADPDFRLVFSVDCEHEQQSVFSIRLHESHAFGSVTSLAATEHE*
Ga0070761_1020603113300005591SoilEVNRILDSEQLTMHSINVANADPDFRLVFSVDGERDQQNLFSIRLHESAAFATVSTLGSTEHE*
Ga0070764_1012691433300005712SoilLSMQSVHIANADPDFRLVFSVNCEHEQQRVLSIRLHESNAFATVTSLGAVEHE*
Ga0075017_10096844513300006059WatershedsDFRLVFSVDSEREQQSVFSIRLHESSVFASVTSLGATEHE*
Ga0066797_129409213300006864SoilLLDAEQLTMHSVHIASGDPDSRMVFAVDCEHEQQSVLSIRLHESTVFGSVALLGTTEHE*
Ga0073928_1004009953300006893Iron-Sulfur Acid SpringPDFRMVFSVDCEHEEQSVFSIRLHESTAFGSVTTLGATEHE*
Ga0099829_1056206113300009038Vadose Zone SoilDADPDLRMVFSVNGDHQQQNVFSLRLHESTAFASVTTLGTTEHE*
Ga0099830_1176239113300009088Vadose Zone SoilAEQLTMHSVHIASADPDFRMVFAVDCEHELQSVFSIRLHESSVFGTVTSLGTTEHE*
Ga0099792_1013242133300009143Vadose Zone SoilIADADPDLRMVFSVNGDHQQQNVFSLRLHESTAFASVTTLGTTEHE*
Ga0116128_107248723300009518PeatlandIASADPDFRMVFSVGCEHEEESVFSIRLHQSTAFSSVTSLGATEHE*
Ga0116225_100952973300009524Peatlands SoilEVNRILDVEQLTMHSVHIANADPDFRMVFSVDGERDEQSVFSIRLHQSAAFATVTTLGTTEHE*
Ga0116136_109555613300009547PeatlandEVNRLLDSEQLTMHSVHIASADPDFRMVFSVGCEHEEESVFSIRLHQSTAFSSVTSLGATEHE*
Ga0116105_111911323300009624PeatlandVLDAEQLTMHSIHIADADPDFRLVFSVDGEPDQQNVFAIRLHESNAFSTVTTLGSTEHE*
Ga0116125_108547913300009628PeatlandDADPNFRLVFSVDCERDQQNVLSIRLHESNAFATVTSLGITEHE*
Ga0116110_111428223300009643PeatlandQLTMQSVHIASAGPDFRMVFAVDCEHQQQSAFSIRLHESNVFGSVTSLGVTEHE*
Ga0116121_124174823300009644PeatlandAGPDFRMVFAVDCEHQQQSAFSIRLHESNVFGSVTSLGVTEHE*
Ga0074046_1015488413300010339Bog Forest SoilIASAPPDFRMVFAVDCEREQQSVFFTRLHESNVFGSVTSLGITEHE*
Ga0137392_1020412813300011269Vadose Zone SoilSVDCEHEEQSVFSIRLHESTAFGSVTTLGATEHE*
Ga0137389_1029918313300012096Vadose Zone SoilNRLLEAEQLTMHSVHIASADPDFRMVFAVDCEHELQSVFSIRLHESSAFASVTSLGTTEHE*
Ga0137363_1010569513300012202Vadose Zone SoilVHIADADPDFRMVFSVDCVHEEQSVFSIRLHESTAFGSVTTLGATEHE*
Ga0137363_1180653113300012202Vadose Zone SoilIAHTDPDFRMVFSLDGEQDQQSIVSLRLHESSAFATVTTLGTTERE*
Ga0137361_1035598233300012362Vadose Zone SoilSVHIADADPDFRMVFSVNGEHEQQKVFSIRLHESTAFASVTMLGTTEHE*
Ga0137359_1087899823300012923Vadose Zone SoilADPDFRMVFSVNGEHEQQKVFSIRLHESTAFASVTMLGTTEHE*
Ga0181532_1062245923300014164BogVHIANADPDFRMVFSVDGEQEQQNILSIRLHESTAFATVSTLGTTEHE*
Ga0181528_1018323713300014167BogNADPDFRMVFSVDGARDQQGVFAVRLHESTAFATVTTLETTEHE*
Ga0181531_1110053123300014169BogTMHSVHIANASPDFRMVFSVDGEADQQSVFSIRLHESNAFATVTSLGITEHE*
Ga0181535_1009590533300014199BogLREVNRILDTEQLTMHSVHIADADPDFRLVFSVDGEREQQDVFSIRLHESAVFATVSTLGTTEHE*
Ga0181526_1011363013300014200BogLDSEQLTIHSVHVANADPDFRMVFSVDGELEQQSAFSIRLHESAAFATVSKLGTTEHE*
Ga0182010_1009258233300014490FenLTMQSVHIASAGPDFRMVFSVDCEREQQSVFSIRLHESPAFASVTSLGATEHE*
Ga0182015_1026353413300014495PalsaHIASAEPDFRIVFSVNCEYDQQKVFSIRLHESPAFASVTSLGSTEHE*
Ga0182030_1102990013300014838BogIANADPDFRMVFSVDGERDQQTVLSVRLHESTAFATVTTLASTEHE*
Ga0187818_10001038123300017823Freshwater SedimentMAGAAPDVRIVFTVDSEREAQNSFSIRLHEPNVFASVNSLGTTEHE
Ga0187801_1014119523300017933Freshwater SedimentDFRLVFSVECEHDEQSVFSIRLHESTAFGTVTSLGATEHE
Ga0187847_1005771813300017948PeatlandNADPDFRMVFSVDGEQEEQKVFSIRLHESDAFASVTSLGSMEHE
Ga0187781_1057512723300017972Tropical PeatlandEGMLQEVNRILDAEQLSVHGMTIASADPNVRMVFSVDGESEQQRELSIRLHESAAFATVTTLGTLEHE
Ga0187888_133576623300018008PeatlandESEQLNLHSVHIANADPDFRMVFSVDGERDQQSVFSIRLHESTAFAVVTTLGTAERE
Ga0187810_1027320713300018012Freshwater SedimentMHSVHIANADPDFRMVFSVECEHDEESVFSMRLHESTAFGTVTSRGATEHE
Ga0187864_1025067113300018022PeatlandASGVPDSRMVFSVDCERDRQNAFSIRLHESSVFGTVTSLGITEHE
Ga0187871_1076216713300018042PeatlandDPDFRMVFAVNCEHEQQRVLSIRLHESNAFASVTSLGAIEHE
Ga0187851_1003010253300018046PeatlandDFRVVFSVDCEHDQQSVFAIRLHESNVFASVVTLGTTEHE
Ga0187859_1003582913300018047PeatlandRLVFSVDCERDQQNVLSIRLHESNAFATVTSLGITEHE
Ga0187769_1081106613300018086Tropical PeatlandIASADHDFRLVFSVECEHDEESVFSIRLHESTAFAAVTSLGATEHE
Ga0187770_1052259913300018090Tropical PeatlandIANADPDFRLVFSVDGEREQQSVFSIRLHESPAFGAVATLGSTEHE
Ga0182031_148589633300019787BogMLREVNRILESEQLNLHSVHIANADPDFRMVFSVDGERDQQSVFSIRLHESTALPS
Ga0182028_111851023300019788FenELLTMQSVHIASAGPDFRMVFSVDCEREQQSVFSIRLHESPAFASVTSLGATEHE
Ga0210399_1019903313300020581SoilSVHIADADPDFRMVFSVDCEHQEQNVFSIRLHESNAFGSVTTLGATEHE
Ga0210385_1150111323300021402SoilHSINVADADPDFRLVFSVDGERDQQNLFSIRLHESAAFATVSTLGSSEHE
Ga0210387_1075454313300021405SoilAEQLTMHSVHIADADHDFRLVFSVDGEQDIQKVFSIRLHESNAFATVSTLGSVEHE
Ga0210391_1009766213300021433SoilEQLTMHSIHIANADPNFRLVFSVDGERDQQDVFSVRLHESDAFATVSTLGTTEHE
Ga0210391_1026360513300021433SoilVFSVDGERDQQNLFSIRLHESAAFATVSTLGSSEHE
Ga0213853_1063438523300021861WatershedsILDSEQLTMHSVRIAHADPDFRMVFSVDGELEQQNVFSIRLHESTAFATVTTLGTTEHE
Ga0213853_1125363313300021861WatershedsPDFRIVFAVDCERDEQNVFSLRLHESNVFAAVTTVGTTERE
Ga0224551_100024913300023259SoilRLAFSVDGEREQQNVFSIRLHESPAFATASTLGTTEHE
Ga0208935_103398113300025414PeatlandVLDAEQLTMHSIHIADADPDFRLVFSVDGEPDQQNVFAIRLHESNAFSTVTTLGSTEHE
Ga0208690_107693523300025434PeatlandDADPNFRLVFSVDCERDQQNVLSIRLHESNAFATVTSLGITEHE
Ga0208037_100766543300025448PeatlandMLREVNRLLDAEQLTIHSVHIASAEPDFRMVFSVDCEREQQSVFSIRLHESTVFGSVTSLGVTEHE
Ga0208191_101270613300025496PeatlandASADPDFRMVFSVGCEHEEESVFSIRLHQSTAFSSVTSLGATEHE
Ga0208848_110051813300025509Arctic Peat SoilMVFAVDCEREQQSVFSIRLHESTVFSRVTSLGVTEHE
Ga0209881_117215523300026273SoilHSVHIASGDPDSRMVFAVDCEHEQQSVLSIRLHESTVFGSVALLGTTEHE
Ga0209131_107081713300026320Grasslands SoilQLTMESVHIADADPDFRLVFAVIGEHPQQKVFSIRLHESTSFASVTTLGTTEHE
Ga0257172_104258813300026482SoilVFAVDCEHELQSVFSIRLHESSAFASVTSLGTTEHE
Ga0257165_102955023300026507SoilHSVHIASADPDFRMVFAVDCEHELQSVFSIRLHESSAFASVTSLGTTEHE
Ga0179587_1015383733300026557Vadose Zone SoilANPDPDFRMVFSVDGEQGQQGALRIRLHESTAFASVSTLGSMEHE
Ga0179587_1087269613300026557Vadose Zone SoilFRMVFSADGELEQQRVFSIRLHESTAFGSVTTLGATEHE
Ga0208724_103337813300027064Forest SoilQSVHVASADPDFRMVFSVNCEHEQQGAFFIHLHEASAFATVTSLGSIEHE
Ga0209421_101084013300027432Forest SoilMHIADADPDFRLVFSVDGEREQQNVFSIRLHESTAFAVVSTLGTVEHE
Ga0209733_113456523300027591Forest SoilLTMHSVHIADADPDFRMVVSIDGEREQQKIFSIRLHESNAFATVTTLGTTEHE
Ga0208044_106668723300027625Peatlands SoilEVNRILDVEQLTMHSVHIANADPDFRMVFSVDGERDEQSVFSIRLHQSAAFATVTTLGTTEHE
Ga0208827_116747413300027641Peatlands SoilANADPDFRMVFSVDGERDEQSVFSIRLHQSAAFATVTTLGTTEHE
Ga0209118_100492563300027674Forest SoilQLTMRSVHIADADPDFRLVFSVDCEHEEQSVFSIRLHESNLFGSVTTLGTTEHE
Ga0209118_101096043300027674Forest SoilQLTMRSVHIADADPDFRLVFSVDCEHEEQSVFSIRLHESNLFGSVTTLGATEHE
Ga0209446_108891023300027698Bog Forest SoilPDFRLVFSVDGEHDQQDLFSIHLHESPAFASVSTLGTTEHE
Ga0209655_1031376623300027767Bog Forest SoilIANAHPDFRMVFAVDGEREEQNVLSIRLHESNAFATVTTLGTTEHE
Ga0209701_1032811223300027862Vadose Zone SoilSVHIADADPDLRMVFSVNGDHQQQNVFSLRLHESTAFASVTTLGTTEHE
Ga0209067_1013581013300027898WatershedsILESEQLTMHSVHIANADPDFRMVFSVDGEREQQGVFSIRLHESTAFATVSTLGATEHE
Ga0302165_1001984613300028678FenFAVDCEREEQSLFLIRLHESNVFGSVKSIGTTEHE
Ga0302225_1024736523300028780PalsaMLREVNRILDSEQLTMHSIHIANSDPDFRLVFSVDGEREQQDVFSVRLHESPAFATVSTLGSTEHE
Ga0302225_1039241013300028780PalsaMHSVHIANADPDFRMVFSVDGEHEQQKVFCVRLHESTAFATVTALGSTEHD
Ga0302222_1003898033300028798PalsaDFRMVFAVNCEHEQQTVLSIRLHESNAFASVTSLGSIEHE
Ga0247271_12226623300029903SoilSEELTMHSIHIANADPDFRMVFSVDGERDQQTVLSVRLHESTAFATVTTLASTEHE
Ga0302141_115341823300029919BogEELTMHSIHIANADPDFRMVFSVDGERDQQTVLSVRLHESTAFATVTTLASTEHE
Ga0302141_120590923300029919BogSEELTMHSIHIANADPDFRMVFSVDGARDQQGVFAIRLHESTAFATVSTLETTEHE
Ga0302304_1036722313300029993PalsaEVNRILDSEQLTMHSIHIANSDPDFRLVFSVDGEREQQDVFSVRLHESPAFATVSTLGSTEHE
Ga0311339_1141308713300029999PalsaEQLAMHSIHIANAEPDFRIVISVDGERDQQSVFSIRLHESNAFATVSTLGTVEHE
Ga0311338_1069087623300030007PalsaTMQSVHIASAEPDFRIVFSVNCEYDQQKVFSIRLHESPAFASVTSLGSTEHE
Ga0311338_1089625023300030007PalsaVHIASVEPDFRIVFSVNCEYEQQKVFSIRLRESPAFASVLSLGSTEHE
Ga0311372_1110799513300030520PalsaSIHIANADPDFRMVFAVNCEHEQQTVLSIRLHESNAFASVTSLGSIEHE
Ga0311372_1305644323300030520PalsaVNRILDSEQLTMHSLHIARADPDFRVVISVDGERNEHNVFSTRLHESTAFATVSNLETVEHE
Ga0311335_1105225323300030838FenPESRMVFAVDCEREQQNVFSIRLHESTLFGRVTSLGVTEHE
Ga0302326_1078867333300031525PalsaEVNRILDSEQLTMHSIHIANADPDFRLVFSVDGEQEQQKVFSIRLHESSAFATASTLGSTEHE
Ga0302326_1161134713300031525PalsaANADPDFRMVFSVDGEHEQQKVFCVRLHESTAFATVTALGSTEHD
Ga0307469_1034409013300031720Hardwood Forest SoilRMVFSVNCEYEEGKLFMIRLHESSAFASVTSLGTVEHE
Ga0302321_10302854013300031726FenFRMVFSVDCEREQQSVFSIRLHESPAFASVTSLGATEHE
Ga0307475_1003946143300031754Hardwood Forest SoilLTMESVHIADADPDLRMVFSVNGDHQQQNVFSLRLHESTAFASVTTLGITEHE
Ga0307475_1011296443300031754Hardwood Forest SoilIADADPDLRMVFSVNGDHQQQNVFSLRLHESTAFASVTTLGTMEHE
Ga0307475_1058723823300031754Hardwood Forest SoilPDLRMVFSVNGDHQQQNVFSLRLHESTAFASVTTLGTMEHE
Ga0307478_1042563033300031823Hardwood Forest SoilFRIVISVDGEQDQQSVFSIRLHESNAFAAVSTLGTVEHE
Ga0307472_10050330913300032205Hardwood Forest SoilLLDAEQLTMHSVHIADADPDFRMVFAIDCERELQSVFSIRLHESSVFATVTSLGTTEHE
Ga0370492_0316872_14_1273300034282Untreated Peat SoilMVFSVDGGKEEQNVFSILLHESTAFAAVLTLGSMEHE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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