Metagenome / Metatranscriptome Family F090305

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090305
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	107 residues
Representative Sequence	MLTIDNIEKLNDTMLGYWKVSEAIASRPTKWCMTEHYCIRMHRNGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKRVIMDKGHFLANMMGYIKAEHALRNKK
Number of Associated Samples	61
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	24.53 %
% of genes near scaffold ends (potentially truncated)	22.22 %
% of genes from short scaffolds (< 2000 bps)	73.15 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.85

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (76.852 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (58.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (53.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.01% β-sheet: 31.88% Coil/Unstructured: 47.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.85
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.85
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SCOP family	SCOP domain	Representative PDB	TM-score
e.43.1.2: Subunits of heterodimeric actin filament capping protein Capz	d3aa7b_	3aa7	0.61
d.198.1.1: Type III secretory system chaperone-like	d1ry9a_	1ry9	0.57
c.51.5.1: CinA-like	d2a9sa1	2a9s	0.57
d.20.1.3: UBC-like	d2daxa1	2dax	0.57
e.43.1.1: Subunits of heterodimeric actin filament capping protein Capz	d3aa0a_	3aa0	0.57

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF12680	SnoaL_2	1.85
PF01541	GIY-YIG	0.93
PF13620	CarboxypepD_reg	0.93
PF01145	Band_7	0.93
PF10688	Imp-YgjV	0.93
PF13455	MUG113	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
All Organisms	root	All Organisms	23.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Viruses	superkingdom	All Organisms → Viruses	20.37 %
cellular organisms	root	All Organisms → cellular organisms	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.85 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.85 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.85 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.85 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.93 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.93 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
Paludibacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae	0.93 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
Paludibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter	0.93 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
Paludibacter propionicigenes	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes	0.93 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.37 %
Paludibacter propionicigenes WB4	strain	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes → Paludibacter propionicigenes WB4	0.93 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001282\|B570J14230_10003959	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	5909	Open in IMG/M
3300001282\|B570J14230_10041680	Not Available	1567	Open in IMG/M
3300002408\|B570J29032_109228548	Not Available	645	Open in IMG/M
3300002408\|B570J29032_109462960	Not Available	783	Open in IMG/M
3300002408\|B570J29032_109614935	Not Available	940	Open in IMG/M
3300002835\|B570J40625_101348944	Not Available	590	Open in IMG/M
3300002835\|B570J40625_101446784	Not Available	566	Open in IMG/M
3300003413\|JGI25922J50271_10002799	Not Available	5045	Open in IMG/M
3300004096\|Ga0066177_10129762	Not Available	990	Open in IMG/M
3300004112\|Ga0065166_10154793	Not Available	878	Open in IMG/M
3300004240\|Ga0007787_10377936	Not Available	705	Open in IMG/M
3300004240\|Ga0007787_10703624	Not Available	505	Open in IMG/M
3300005662\|Ga0078894_10433875	All Organisms → Viruses → Predicted Viral	1184	Open in IMG/M
3300005662\|Ga0078894_10478070	Not Available	1120	Open in IMG/M
3300005662\|Ga0078894_10655477	Not Available	930	Open in IMG/M
3300005662\|Ga0078894_10830180	Not Available	806	Open in IMG/M
3300005662\|Ga0078894_11023188	Not Available	709	Open in IMG/M
3300005662\|Ga0078894_11201661	Not Available	642	Open in IMG/M
3300005662\|Ga0078894_11303807	Not Available	610	Open in IMG/M
3300005662\|Ga0078894_11405255	Not Available	583	Open in IMG/M
3300005662\|Ga0078894_11566516	Not Available	545	Open in IMG/M
3300006639\|Ga0079301_1229788	Not Available	525	Open in IMG/M
3300007165\|Ga0079302_1093162	Not Available	637	Open in IMG/M
3300007622\|Ga0102863_1018531	All Organisms → Viruses → Predicted Viral	1952	Open in IMG/M
3300007624\|Ga0102878_1063025	Not Available	1121	Open in IMG/M
3300007627\|Ga0102869_1191734	Not Available	548	Open in IMG/M
3300007992\|Ga0105748_10097227	All Organisms → Viruses → Predicted Viral	1175	Open in IMG/M
3300007992\|Ga0105748_10184512	Not Available	863	Open in IMG/M
3300008055\|Ga0108970_10148648	All Organisms → Viruses → Predicted Viral	2216	Open in IMG/M
3300008107\|Ga0114340_1015922	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	7725	Open in IMG/M
3300008108\|Ga0114341_10019500	Not Available	9742	Open in IMG/M
3300008108\|Ga0114341_10079696	Not Available	2037	Open in IMG/M
3300008108\|Ga0114341_10123883	All Organisms → Viruses → Predicted Viral	1537	Open in IMG/M
3300008108\|Ga0114341_10162070	Not Available	1288	Open in IMG/M
3300008113\|Ga0114346_1033881	All Organisms → Viruses → Predicted Viral	2658	Open in IMG/M
3300008113\|Ga0114346_1072521	Not Available	1647	Open in IMG/M
3300008259\|Ga0114841_1082449	Not Available	1452	Open in IMG/M
3300008261\|Ga0114336_1034585	Not Available	2757	Open in IMG/M
3300008261\|Ga0114336_1040250	All Organisms → Viruses → Predicted Viral	2505	Open in IMG/M
3300008261\|Ga0114336_1160431	Not Available	986	Open in IMG/M
3300008261\|Ga0114336_1161764	Not Available	980	Open in IMG/M
3300008261\|Ga0114336_1229386	Not Available	757	Open in IMG/M
3300008261\|Ga0114336_1320689	Not Available	572	Open in IMG/M
3300008962\|Ga0104242_1004016	All Organisms → Viruses → Predicted Viral	2761	Open in IMG/M
3300009151\|Ga0114962_10016070	Not Available	5377	Open in IMG/M
3300009419\|Ga0114982_1003409	Not Available	6549	Open in IMG/M
3300009419\|Ga0114982_1005708	Not Available	4764	Open in IMG/M
3300009419\|Ga0114982_1047216	All Organisms → Viruses → Predicted Viral	1363	Open in IMG/M
3300009419\|Ga0114982_1075230	Not Available	1050	Open in IMG/M
3300009419\|Ga0114982_1086622	Not Available	972	Open in IMG/M
3300010354\|Ga0129333_10175936	All Organisms → Viruses → Predicted Viral	1955	Open in IMG/M
3300010370\|Ga0129336_10716925	Not Available	529	Open in IMG/M
3300011268\|Ga0151620_1005177	All Organisms → Viruses → Predicted Viral	4839	Open in IMG/M
3300012352\|Ga0157138_1000297	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes → Paludibacter propionicigenes WB4	11077	Open in IMG/M
3300012663\|Ga0157203_1015586	Not Available	1171	Open in IMG/M
3300012665\|Ga0157210_1040574	Not Available	718	Open in IMG/M
3300013004\|Ga0164293_10079363	All Organisms → Viruses → Predicted Viral	2564	Open in IMG/M
3300013004\|Ga0164293_10513774	Not Available	789	Open in IMG/M
3300013005\|Ga0164292_10117363	Not Available	1984	Open in IMG/M
3300013005\|Ga0164292_10578382	Not Available	728	Open in IMG/M
3300014050\|Ga0119952_1012498	All Organisms → Viruses → Predicted Viral	3227	Open in IMG/M
3300020498\|Ga0208050_1007476	Not Available	1294	Open in IMG/M
3300020542\|Ga0208857_1026023	Not Available	954	Open in IMG/M
3300020571\|Ga0208723_1012643	Not Available	1404	Open in IMG/M
3300021108\|Ga0214162_1061394	Not Available	618	Open in IMG/M
3300021961\|Ga0222714_10039008	All Organisms → Viruses → Predicted Viral	3421	Open in IMG/M
3300021961\|Ga0222714_10514956	Not Available	611	Open in IMG/M
3300021962\|Ga0222713_10072567	All Organisms → Viruses → Predicted Viral	2539	Open in IMG/M
3300021963\|Ga0222712_10606020	Not Available	631	Open in IMG/M
3300021963\|Ga0222712_10664617	Not Available	592	Open in IMG/M
3300027114\|Ga0208009_1071664	Not Available	601	Open in IMG/M
3300027121\|Ga0255074_1016867	Not Available	941	Open in IMG/M
3300027140\|Ga0255080_1054043	Not Available	619	Open in IMG/M
3300027156\|Ga0255078_1007309	All Organisms → Viruses → Predicted Viral	2649	Open in IMG/M
3300027508\|Ga0255072_1075557	Not Available	676	Open in IMG/M
3300027710\|Ga0209599_10001139	Not Available	13497	Open in IMG/M
3300027710\|Ga0209599_10001264	Not Available	12466	Open in IMG/M
3300027710\|Ga0209599_10005401	All Organisms → Viruses → Predicted Viral	4450	Open in IMG/M
3300027710\|Ga0209599_10103311	Not Available	751	Open in IMG/M
3300027710\|Ga0209599_10201540	Not Available	537	Open in IMG/M
3300027749\|Ga0209084_1084493	All Organisms → Viruses → Predicted Viral	1431	Open in IMG/M
3300027804\|Ga0209358_10126881	Not Available	1387	Open in IMG/M
3300027804\|Ga0209358_10145081	Not Available	1274	Open in IMG/M
3300031857\|Ga0315909_10762810	Not Available	618	Open in IMG/M
3300031857\|Ga0315909_10948733	Not Available	525	Open in IMG/M
3300032092\|Ga0315905_10812557	Not Available	812	Open in IMG/M
3300033994\|Ga0334996_0005648	Not Available	8500	Open in IMG/M
3300033994\|Ga0334996_0351865	Not Available	710	Open in IMG/M
3300034013\|Ga0334991_0179233	Not Available	939	Open in IMG/M
3300034018\|Ga0334985_0156413	Not Available	1550	Open in IMG/M
3300034062\|Ga0334995_0425103	Not Available	823	Open in IMG/M
3300034082\|Ga0335020_0079419	Not Available	1687	Open in IMG/M
3300034082\|Ga0335020_0244457	Not Available	889	Open in IMG/M
3300034082\|Ga0335020_0492455	Not Available	582	Open in IMG/M
3300034101\|Ga0335027_0128274	All Organisms → Viruses → Predicted Viral	1893	Open in IMG/M
3300034102\|Ga0335029_0021852	All Organisms → Viruses → Predicted Viral	4861	Open in IMG/M
3300034102\|Ga0335029_0031480	Not Available	3984	Open in IMG/M
3300034102\|Ga0335029_0093345	All Organisms → Viruses → Predicted Viral	2135	Open in IMG/M
3300034102\|Ga0335029_0781490	Not Available	506	Open in IMG/M
3300034106\|Ga0335036_0400625	Not Available	882	Open in IMG/M
3300034200\|Ga0335065_0702631	Not Available	577	Open in IMG/M
3300034279\|Ga0335052_0223609	Not Available	1074	Open in IMG/M
3300034283\|Ga0335007_0174657	All Organisms → Viruses → Predicted Viral	1516	Open in IMG/M
3300034283\|Ga0335007_0551623	Not Available	678	Open in IMG/M
3300034284\|Ga0335013_0480782	Not Available	747	Open in IMG/M
3300034284\|Ga0335013_0813569	Not Available	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	87.04%
Terrestrial	Environmental → Terrestrial	12.04%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	75.93%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	12.04%
Marine	Environmental → Aquatic → Marine	11.11%
Leaf	Host-Associated → Plants → Leaf	0.93%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	38.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	12.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.63%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.70%
River	Environmental → Aquatic → Freshwater → River	3.70%
Coastal	Environmental → Aquatic → Marine → Coastal	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.78%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.78%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	38.89%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	19.44%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	12.04%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	7.41%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.63%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.78%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.78%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	22.22%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	16.67%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	12.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	12.04%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	7.41%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.63%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.78%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.78%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.78%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.78%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.85%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.85%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.85%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.93%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300007165	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007627	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-02	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020542	Freshwater microbial communities from Lake Mendota, WI - 05NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020571	Freshwater microbial communities from Lake Mendota, WI - 31AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021108	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027121	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027140	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8h	Environmental	Open in IMG/M
3300027156	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027508	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J14230_1000395915	3300001282	Freshwater	MLTIQNIGDLNDTVISDWKVIEAGAIGPKKWLPTEHYCIKLGKYGSEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGSFSKRVIMDKGHFLKSMMGWIKAEHALRNKK*
B570J14230_100416804	3300001282	Freshwater	MLTIENIEGLNDTTIGGWKVREAEARRSMKWLPTEHYCITLDKAGSNGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGSFSKRVIMDKGHFLASMMGWIKAEYTLRNKK*
B570J29032_1092285482	3300002408	Freshwater	MLRIENIEKLNDTYLSAWQVAEAKASVPKKWLPTEHYSISLGKGNNGAAILIDRNINPLTQQYHVYVCYDSFDNRIYEGAFSKRVIMDKGHFLKNMMGYVNAEYEMRKK*
B570J29032_1094629602	3300002408	Freshwater	MLKIENIEKLNDTVISDWKVIEAGAIGPKKWLMTEHYCIKLGKYGSEAAAILIWRNINPLTKQYHVYVCYDDFTNKIYEGSFTKRVIMDKGHFLKNIMGYVNAEYTLRNKK*
B570J29032_1096149352	3300002408	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKASKPTKWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYGNFDNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKG*
B570J40625_1013489441	3300002835	Freshwater	MLTIENIESLNDTYLSAWQVAEAKASKPTKWLPTEHYSISLGRANDGAAILIDRWINPLTKQYHVYVCYGNFDNRIYEGSFSKRVIMDKGHFLKHMMGYIKAEHALRNKK*
B570J40625_1014467841	3300002835	Freshwater	LNDTVISDWKVIEAGAIGPKKWLMTEHYCIKLGKYGSEAAAILIWRNINPLTKQYHVYVCYDDFTNKIYEGSFTKRVIMDKGHFLKNIMGYVNAEYTLRNKK*
JGI25922J50271_100027998	3300003413	Freshwater Lake	MLTIKNIESLDGTKLGYWKVSEAIASRPTKWLMTEHYCIRIHRDGEAAAILIWRNINPLTKQYHVEVCYEDFTNKIYEGAFSKRVIMDKGHFLSHMMGYIKAEHALRKNNYQLKQTPKKP
Ga0066177_101297621	3300004096	Freshwater Lake	MLTIRNIESLDGTKLGYWKVSEAIASRPTKWCMTEHYCIRIHRDGEAAAILIWRNINPLTKQYHVEVCYEDFTNKIYEGAFSKRVIMDKGHFLSHMMGYIKAEHALRKK*
Ga0065166_101547932	3300004112	Freshwater Lake	MLTIKNIESLNGMKLGYWEVSEAEASRPRKWLMTEHYCIRVHRNGEAAAILIWRNINPLLRQYHVEVCYEDFTNKIYEGAFSKQVIMDKGHFLKHMMGYVKAEYELRKTK*
Ga0007787_103779361	3300004240	Freshwater Lake	MLTIENIEKLNDTYLGYWQVADAKAYKPRKWLMTEHYSISLGRGNSGAAILIDRNINRLTHQYHVYVCYDSFDNKIYEGAFSKRVIMDKGHFLKHMMGYIKAEHALRNKK*
Ga0007787_107036241	3300004240	Freshwater Lake	MLTIENIEGLNDKYLGKNWQVAEAKASGPKKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVYVCYDSFDNTIYEGAFSKRVIMDKGHFLASMMGYINAEYEMRKK*
Ga0078894_104338754	3300005662	Freshwater Lake	MLTIKGIEDLKDQKLGYWTVVEAGASKPRKWCMTEHYCITLDRAGNGAAILIWRNINPLTKQYHVDVCYEDFTNKIYEGAFSKKVIMDKGHFLKHMMGYIKAEHALRNKK*
Ga0078894_104780702	3300005662	Freshwater Lake	MLTIRNIEGLNGMKLGYWEVSEAEASRPRKWLMTEHYCIRVHRNGEAAAILIWRNINPLLRQYHVEVCYEDFTNKIYEGAFSKQVIMDKGHFLKHMMGYVKHEYELRKQK*
Ga0078894_106554772	3300005662	Freshwater Lake	MLRIDNIGKLTNTKLGEWTVVEAGASKPRKWLMTEHYCITLDRAGNGAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKSVIMDKAHFLASMMGWIKAEYTLRNKK*
Ga0078894_108301802	3300005662	Freshwater Lake	MLTIKNIESLNLTKLGYWKVNDAEASRPTKWLMTEHYCIRLHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKKVIMDKAHFLASMMGYIKAEHALRNKK*
Ga0078894_110231882	3300005662	Freshwater Lake	MLTIQNIEGLNNQPINGWTVNDARANKPTKWLPTEHYCITLDKYGNGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGAFSKRVIRDKGHFLKNMMGYVNAEYEMRKQK*
Ga0078894_110645112	3300005662	Freshwater Lake	MLTIKNIESLDGTKLGYWKVSEAIASRPTKWLMTEHYCIRIHRDGEAAAILIWRNINPLTKQYHVEVCYEDFTNKIYEGAFSKRVI
Ga0078894_110645132	3300005662	Freshwater Lake	MLTIRNIESLDGTKLGYWKVSEAIASRPTKWCMTEHYCIRIHRDGEAAAILIWRNINPLTKQYHVEVCYEDFTNKIYEGAFSKRVI
Ga0078894_112016611	3300005662	Freshwater Lake	MLTIENIEKLNDTYLGYWQVADAKAYKPRKWLMTEHYSISLGRGNSGAAILIDRNINRLTHQYHVYVCYDSFDNKIYEGAFSKRVIMDKGHFLKHMMGYVKAE
Ga0078894_113038072	3300005662	Freshwater Lake	MLTIKNIESLDGTKLGYWKVSEAEASRPTKWCMTEHYCIRIHRDGEAAAILIWRNINPLTRQYHVDVCYDDFTNKIYEGAFSKKVIMDKGHFLASMMGWIKAEHTLRNKK*
Ga0078894_114052551	3300005662	Freshwater Lake	MLTIENIENLNGQHLGEWRVIEAKASRPRKWLMVEHYCIRFERGTFGAAILIWRNINPLTKQYHVNVCYEDFSNTIYEGAFSKRVIMDKGHFLKHMM
Ga0078894_115665162	3300005662	Freshwater Lake	MLTIENIEKLNDTYFADWQVAEAKASGPKKWLPTEHYSISLGKGNSGAAILIWRNINPLTKQYHVYVCYDSFDNRIYEGAFSKRVIRDKGHFLKHMMGYVKAEYEMRKQK*
Ga0079301_12297881	3300006639	Deep Subsurface	MLTIQNIENLKGMNLGYWKVNDVEASRPTKWLMTEHYCIRVHRDGEAAAILIWRNINPLTKQYHVNVCYDDFTNVIYEGAFSKQVIQDKGHFLASMMGYIKAEHALRNKK*
Ga0079302_10931622	3300007165	Deep Subsurface	MLTIKNIEDLNGQQLGEWRVTDAKASRPRKWLMTEHYCIRLERGTFGAAILIWRNINPLLKQYHIEICYEDFTNKIYEGAFSKQVLQDKGHFLSNMMGY
Ga0102863_10185316	3300007622	Estuarine	MLTIQNIEKLNDTHLSAWQVAEAKACKPRKWLPTEHYCISLGKQNSGAAILIDRCINPLTKQYHVYVCYDSFDNRIYEGAFSKRVIMDKGHFLKNMMAYVKHEYEMRKQK*
Ga0102878_10630252	3300007624	Estuarine	VSDVEASRPTKWLMTEHYCIRVHRGGTAAAILIWRNINPLIKQYHVEVCYEDFKNKIYEGAFSKQVIMDKGHFLANMMGYIKAEHALRNKK*
Ga0102869_11917341	3300007627	Estuarine	MLNIKGIEDLKGTRLGYWKVKEAGASRPMKWLPTEHYCITLERGTFGAAILIWRNINPLTKQYHVEVCFDDFTNKIYEGAFSKQVIMDKGHFLANMMGYIKAEHALRNKK*
Ga0105748_100972274	3300007992	Estuary Water	HLSAWQVAEAKACKPRKWLPTEHYCISLGKQNSGAAILIDRCINPLTKQYHVYVCYDSFDNRIYEGAFSKRVIMDKGHFLKNMMAYVKHEYEMRKQK*
Ga0105748_101845121	3300007992	Estuary Water	EVEASRPTKWCMTEHYCIRIHRDGEAAAILIWRNINPLTKQYHVDVCYEDFTNKIYEGAFSKQVIMDKGHFLKHMMGYVKAEYELRKQK*
Ga0108970_101486482	3300008055	Estuary	MLTIQNIEKLNDTHLSAWQVAEAKACKPRKWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYDSFDNRIYEGAFSKRVIMDKGHFLKNMMAYVKHEYEMRKQK*
Ga0114340_10159221	3300008107	Freshwater, Plankton	MLTIENIEKLNDTVISDWKVIEAGASRPRKWLPTEHYCIKLGKYDSEAAAILIWRNINPLTKQYHVYVCYDDFTNKIYEGSFSKRVIMDKGHFLKHMMGYIKAEWELRKQSKP*
Ga0114341_100195002	3300008108	Freshwater, Plankton	MLTIENIEKLNDTVISDWKVIEAGASRPRKWLPTEHYCIKLGKYDSEAAAILIWRNINPLTKQYHVYVCYDDFTNKIYEGSFSKRVIMDKGHFLKHMIGYVKAEWELRKQSKP*
Ga0114341_100796964	3300008108	Freshwater, Plankton	MLTIRNIESLDGTKLGYWKVSEAEASRPRKWLMVEHYCIRIHRNDEAAAILIWRNINPLTKQYHVEVCYEDFTNKIYEGAFSKRVIMDKGHFLSHMMGYIKAEHALRKK*
Ga0114341_101238832	3300008108	Freshwater, Plankton	MLTIQNIENLKGMKLGYWKVSDAEASRPTKWLMTEHYCIRVHRDGEAAAILIWRNINPLLRQYHVEVCYDDFTNKIYEGAFSKQVIQDKGHFLSHIMGHIKAEYYLRKQK*
Ga0114341_101620705	3300008108	Freshwater, Plankton	MLTIENIEKLNDKYLGKNWQVAEARACRPTKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVHVCYDSFDNTIYEGSFTKRVIMDKGHFLASMMGYINAEYKMRKK*
Ga0114346_10338813	3300008113	Freshwater, Plankton	MLTIENIEKLNDKYLGKNWQVAEARPCRPMKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVHLCYNSFDNVIYEGSFTKKVIMDKENFLASMMGYINAEYEMRKK*
Ga0114346_10725214	3300008113	Freshwater, Plankton	MLTIENIEGLNDKYLGKNWQVAEAKASGPKKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVYVCYDSFDNTIYEGAFSKRMIMDKGHFLASMMGYINAEYEMRKK*
Ga0114841_10824494	3300008259	Freshwater, Plankton	MLTIENIEKLNDKYLGKNWQVAEARACRPMKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVYVCYDSFDNTIYEGAFSKRVIMDKGHFLASMMGYINAEYEMRKK*
Ga0114336_10345858	3300008261	Freshwater, Plankton	MLTIENIEGLTNQRLGYWEVSEAEASRPKKWLMTEHYCIKLHRNGEAAAILIWRNINPLTKQYHVDICYDDFTNKIYEGSFSKRVIRDKAHFLASMMAYIKAEHALRNKK*
Ga0114336_10402507	3300008261	Freshwater, Plankton	MLYIENIGKLTDTMLGYWKVVGVEDNGPTKWLQSQHYCITLGRAGEGAAILIERKINPLTKQYHVYVCYEEFDNRIHESSFSKRAFMDKGHFLKNMMGYVKAEYEMRKQK*
Ga0114336_11604312	3300008261	Freshwater, Plankton	MLTIRNIESLDGTKLGYWKVSEAIASRPTKWCMTEHYCIRIHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKRVIMDKGHFLASMMGYIKAEHALRNKK*
Ga0114336_11617643	3300008261	Freshwater, Plankton	MLTIQNIENLKGMNLGYWKVNDVEASRPTKWLMTEHYCIRVHRDGEAAAILIWRNINPLTKQYHVNVCYDDFTNVIYEGAFSKQVIQDKGHFLASMMGYIK
Ga0114336_12293862	3300008261	Freshwater, Plankton	MLTIQNIESLNGMTLGYWKVSEAEASRPRKWLMVEHYCIRIHRNDEAAAILIWRNINPLTKQYHVEVCYEDFTNKIYEGAFSKRVIMDKGHFLSHMMGYIKAEHALRKK*
Ga0114336_13206892	3300008261	Freshwater, Plankton	MLTIQNIENLKGMKLGYWKVSDAEASRPTKWLMTEHYCIRVHRDGEAAAILIWRNINPLLRQYHVEVCYDDFTNKIYEGAFSKQVIQDKGHFLANIMGHIKAEYYLRKQK*
Ga0104242_10040167	3300008962	Freshwater	MNLGYWKVSEARASRPTKWLMTEHYCIRVHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKSVIMDKGHFLKHMMGYIKAEHALRNKK*
Ga0114962_100160707	3300009151	Freshwater Lake	MLTIENIGKLTNTKLGYWTVVEAGVSRPKKWCMSEHYCITLDRAGNGAAILIWRNINPLTKQYHVDVCYEDFTNKIYEGAFSKRVIMDKGHFLANMMGYIKAEHTLRNKK*
Ga0114982_100340910	3300009419	Deep Subsurface	MLTIRNIESLNLTKLGYWKVNDAEASRPTKWCMTEHYCIRLHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKRVIMDKGHFLASMMGYIKAEHTLRNKK*
Ga0114982_10057087	3300009419	Deep Subsurface	MLTIQNIEGLNDTVISGWKVTDAEACRPTKWLMTEHYCIRLNKYGEAAAILIDRWINPLTKQYHVYVCYEDFSNKIYEGAFTKRVIMDKGHFLKHMMGYITAEYEMRKQK*
Ga0114982_10472161	3300009419	Deep Subsurface	IENIENLNGQHLGEWRVTDAKASRPRKWLMVEHYCIRLERGTFGAAILIWRNINPLTKQYHVNVCYEDFSNKIYEGAFSKRVIMDKGHFLKHMMGYVTAEYEMRKP*
Ga0114982_10752302	3300009419	Deep Subsurface	MLTIENIEGLTNQRLGYWEVSEAEASRPKKWLMTEHYCIKLHRNGEAAAILIWRNINPLTKQYHVDICYDDFTNKIYEGSFSKRVIRDKAHFLASMMGYIKAEHALRNKK*
Ga0114982_10866223	3300009419	Deep Subsurface	MLTIKNIESLDGTKLGYWKVSEAVASRPTKWLMTEHYCIRIHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKRVIMDKGHFLASMMGYI
Ga0129333_101759363	3300010354	Freshwater To Marine Saline Gradient	MLTIDNIEKLNDTMLGYWKVSEAIASRPTKWCMTEHYCIRMHRNGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKRVIMDKGHFLANMMGYIKAEHALRNKK*
Ga0129336_107169252	3300010370	Freshwater To Marine Saline Gradient	LTIDNIEKLNDTMLGYWKVSEAIASRPTKWCMTEHYCIRMHRNGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKRVIMDKGHFLANMMGYIKAEHALRNKK*
Ga0151620_10051777	3300011268	Freshwater	MLTIQNIENLKGMNLGYWKVSEAVASRPTKWLMTEHYCIRVHRNGEAAAILIWRNINPLTKQYHVNVCYDDFTNVIHEGAFSKQVIMDKGHFLSHIMGNIKAEYYLRKQK*
Ga0157138_10002973	3300012352	Freshwater	MLTIQNIEKLNDTYFADWQVAEATARRPTKWLPTEHYSISLGKGNSGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGAFSKRVIMDKGHFLKNMMGYINYEYEMRKQK*
Ga0157203_10155862	3300012663	Freshwater	MLTIQNIEGLNNQPINGWNVNDARANKPTKWLPTEHYCITLGKYGNGAAILIDRWINPLTKQYHVYFCYDEFSNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKK*
Ga0157210_10405742	3300012665	Freshwater	MLTIENIEKLNDNHLGAWTVVEVEARRHTKWLPTEHYCITLDRADSGGAAILIDRNINPLTKQYHVYVCYEEFSNRIYEGAFSKRVIMDKGHFLKNMMGYVNAEYEMRKQK*
Ga0164293_100793637	3300013004	Freshwater	MLTIKNIESLNDTKLGYWQVAEAKARRPMKWLMTEHYSISLGRANDGAAILIDRNINPLTKQYHVYVCYDSFDNKIYEGAFTKRVIMDKGHFLANMMGYVKAEWELRKK*
Ga0164293_105137741	3300013004	Freshwater	MLTIKNIESLNDTKLGYWQVAEAKASRPKKWLPTEHYSISLGRANDGAAILIDRNINGLTKQYHVYVCYDSFDNKIYEGAFTKRVIMDKGHFLA
Ga0164292_101173636	3300013005	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKACKPRNWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKQK*
Ga0164292_105783823	3300013005	Freshwater	MLTIKNIESLNDTKLGYWQVAEAKASRPKKWLPTEHYSISLGRANDGAAILIDRNINGLTKQYHVYVCYDSFDNKIYEGAFTKRV
Ga0119952_10124981	3300014050	Freshwater	LDGMNLGYWKVSEARASRPTKWLMTEHYCIRVHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKSVIMDKGHFLKHMMGYIKAEHALRNKK*
Ga0208050_10074761	3300020498	Freshwater	MLTIENIEGLNDTTIGGWKVREAEARRSMKWLPTEHYCITLDKAGSNGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGSFSKRVIMDKGHFLASMMGWIKAEYTLRNKK
Ga0208857_10260231	3300020542	Freshwater	GDLNDTVISDWKVIEAGAIGPKKWLPTEHYCIKLGKYGSEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGSFSKRVIMDKGHFLKSMMGWIKAEHALRNKK
Ga0208723_10126431	3300020571	Freshwater	MLTIENIESLNDTYLSAWQVAEAKASKPTKWLPTEHYSISLGRANDGAAILIDRWINPLTKQYHVYVCYGNFDNRIYEGSFSKRVIMDKGHFLKHMMGYIKAEHALRNKK
Ga0214162_10613942	3300021108	Freshwater	MLTIQNIGDLNDTVISDWKVIEAGAIGPKKWLPTEHYCIKLGKYGSEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGSFSKRVIMDKGHFLKSMMGWIKAEHALRNKK
Ga0222714_100390085	3300021961	Estuarine Water	MLTIQNIENLKGMNLGYWKVSEAVASRPTKWLMTEHYCIRVHRNGEAAAILIWRNINPLTKQYHVNVCYDDFTNVIHEGAFSKQVIMDKGHFLSHIMGNIKAEYYLRKQK
Ga0222714_105149561	3300021961	Estuarine Water	MLTIQNIENLKGMNLGYWKVSDVEASRPTKWLMTEHYCIRVHRNGEAAAILIWRNINPLTKQYHVNVCYDDFTNVIYEGAFSKQVIMDKGHFLANTLGYIKAEHALRNKK
Ga0222713_100725672	3300021962	Estuarine Water	MLTIKNIESLEGMNLGYWKVSEAIASRPTKWLMTEHYCITLDRGGNGAAILIWRNINPLTKQYHVDVCYEDFTNKIYEGAFSKQIIMDKGHFLKHMMGYVKAEYELRKQK
Ga0222712_106060201	3300021963	Estuarine Water	MLTIQNIENLKGMNLGYWKVSDAEASRPTKWLMTEHYCIRVHRGGEAAAILIWRNTNPLLKQYHVEVCYEDFTNKIYEGAFSKQVLQDKGHFLSHIMGHIKAEYYLRKQK
Ga0222712_106646171	3300021963	Estuarine Water	MLTIKNIESLNGMNLGYWKVTDAEASKPTKWLMTEHYCIRVHRDGEAAAILIWRNINPLTKQYHVDVCYDSFDNKIYEGALSKRVIMDKGHFLSNMMGYIKAEYDLRKQK
Ga0208009_10716642	3300027114	Deep Subsurface	MLTIKNIEDLNGQQLGEWRVTDAKASRPRKWLMTEHYCIRLERGTFGAAILIWRNINPLLKQYHIEICYEDFTNKIYEGAFSKQVLQDKGHFLSNMMGYI
Ga0255074_10168671	3300027121	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKACKPRKWLPTEHYCISLGKQNSGAAILIDRCINPLTKQYHVYVCYDSFDNRIYEGAFSKRVIMDKGHFLKNMMAYVKHEYEMRKQK
Ga0255080_10540431	3300027140	Freshwater	TLLKNTITNDRMLTIQNIEKLNDTHLSAWQVAEAKACKPRKWLPTEHYCISLGKQNSGAAILIDRCINPLTKQYHVYVCYDSFDNRIYEGAFSKRVIMDKGHFLKNMMAYVKHEYEMRKQ
Ga0255078_10073099	3300027156	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKACKPRKWLPTEHYCISLGKQNSGAAILIDRCINPLTKQYHVYVCYDSFDNRIYEGAFSKRVIMD
Ga0255072_10755571	3300027508	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKACKPRKWLPTEHYCISLGKQNSGAAILIDRCINPLTKQYHVYVCYDSFDNRIYEGAFSKRVIMDKGHFLKNMMAYVKHEY
Ga0209599_1000113926	3300027710	Deep Subsurface	MLTIQNIEGLNDTVISGWKVTDAEACRPTKWLMTEHYCIRLNKYGEAAAILIDRWINPLTKQYHVYVCYEDFSNKIYEGAFTKRVIMDKGHFLKHMMGYITAEYEMRKQK
Ga0209599_1000126423	3300027710	Deep Subsurface	MLTIRNIESLNLTKLGYWKVNDAEASRPTKWCMTEHYCIRLHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKRVIMDKGHFLASMMGYIKAEHTLRNKK
Ga0209599_100054019	3300027710	Deep Subsurface	MLTIENIEGLTNQRLGYWEVSEAEASRPKKWLMTEHYCIKLHRNGEAAAILIWRNINPLTKQYHVDICYDDFTNKIYEGSFSKRVIRDKAHFLASMMGYIKAEHALRNKK
Ga0209599_101033112	3300027710	Deep Subsurface	MLTIKNIESLDGTKLGYWKVSEAVASRPTKWLMTEHYCIRIHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKRVIMDKGHFLASMMGYIKAE
Ga0209599_102015401	3300027710	Deep Subsurface	LGYWKVSEAEASRPTKWCMTEHYCIRVHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKKVIMDKAHFLASMMGWIKAEHTLRNKK
Ga0209084_10844932	3300027749	Freshwater Lake	MLTIENIGKLTNTKLGYWTVVEAGVSRPKKWCMSEHYCITLDRAGNGAAILIWRNINPLTKQYHVDVCYEDFTNKIYEGAFSKRVIMDKGHFLANMMGYIKAEHTLRNKK
Ga0209358_101268813	3300027804	Freshwater Lake	MLTIENIEKLNDTYLGYWQVADAKAYKPRKWLMTEHYSISLGRGNSGAAILIDRNINRLTHQYHVYVCYDSFDNKIYEGAFSKRVIMDKGHFLKHMMGYIKAEHALRNKK
Ga0209358_101450813	3300027804	Freshwater Lake	MLTIENIEGLNDKYLGKNWQVAEAKASGPKKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVYVCYDSFDNTIYEGAFSKRVIMDKGHFLASMMGYINAEYEMRKK
Ga0315909_107628102	3300031857	Freshwater	MLTIENIEKLNDKYLGKNWQVAEARPCRPMKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVHLCYNSFDNVIYEGSFTKKVIMDKENFLASMMGYINAEYEMRKK
Ga0315909_109487332	3300031857	Freshwater	MLTIENIEGLNDKYLGKNWQVAEAKASGPKKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVYVCYDSFDNTIYEGAFSKRVIMDKGH
Ga0315905_108125572	3300032092	Freshwater	MLTIENIEKLNDKYLGKNWQVAEARPCRPMKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVYLCYNSFDNVIYEGSFTKKVIMDKENFLASMMGYINAEYEMRKK
Ga0334996_0005648_2919_3251	3300033994	Freshwater	MLKIENIEKLNDTYFGDWQVAEAKASRPKKWLPTEHYSISLGKGNDGAAILIWRNINPLTKQYHVYVCYDSFDNRIYEGAFSKRVIMDKGHFLKNMMGYVNAEYTLRKKQ
Ga0334996_0351865_354_683	3300033994	Freshwater	MLRIENIEKLNDTYLSAWQVAEAKASVPKKWLPTEHYSISLGKGNNGAAILIDRNINPLTQQYHVYVCYDSFDNRIYEGAFSKRVIMDKGHFLKNMMGYVNAEYEMRKK
Ga0334991_0179233_418_747	3300034013	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKASKPTKWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYGNFDNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKG
Ga0334985_0156413_1153_1482	3300034018	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKACKPRNWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKK
Ga0334995_0425103_112_447	3300034062	Freshwater	MLKIENIEKLNDTVISDWKVIEAGAIGPKKWLMTEHYCIKLGKYGSEAAAILIWRNINPLTKQYHVYVCYDDFTNKIYEGSFTKRVIMDKGHFLKNIMGYVNAEYTLRNKK
Ga0335020_0079419_602_940	3300034082	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKACKPRNWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKQSKP
Ga0335020_0244457_244_576	3300034082	Freshwater	MLRIDNIGKLTNTKLGEWKVAQAGASGRMKWLPTEHYCITLERDTFGAAILIWRNINPLTKQYHVYVCYNNFDNRIYEGAFSKRVIMDKAHFLASMMGYIKAEHALRNKK
Ga0335020_0492455_59_391	3300034082	Freshwater	MLTIKNIEKLNNTHLSAWQVADAKACKPRNWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKQK
Ga0335027_0128274_159_491	3300034101	Freshwater	MLTIENIEKLNDKYLGKNWQVAEARACRPMKWLPTEHYSISLGRSNSGAAILIWRNINPLTKQYHVHLCYNSFDNVIYEGSFTKKVIMDKENFLASMMGYINAEYEMRKK
Ga0335029_0021852_4588_4860	3300034102	Freshwater	MLQIENIGKLTNTKLGEWTVVDAEARRPMKWLPTEHYCITLDKAGIGGAAILIDRNINRLTKQYHVYVCYDEFSNRIYEGAFSKRVIMDKG
Ga0335029_0031480_806_1138	3300034102	Freshwater	MLTIENIEGLNHKYLGKNWQVAEAKASGPKKWLPTEHYSISLGRGNSGAAILIWRNINPLTKQYHVHVCYDSFDNTIYEGAFSKRVIMDKGHFLASMMGYINAEYEMRKK
Ga0335029_0093345_126_461	3300034102	Freshwater	MLKIENIEGLDGQTISGWKVIEVGAIGPKKWLPTEHYCIKLAKYNSEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFFKKVIMDKEHFLKSMMGWIKAEHTLRNKK
Ga0335029_0781490_238_504	3300034102	Freshwater	MLTIRNIESLDGTKLGYWKVSEAIASRPTKWCMTEHYCIRIHRDGEAAAILIWRNINPLTKQYHVDVCYDDFTNKIYEGAFSKRVIMDK
Ga0335036_0400625_213_545	3300034106	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKASKPTKWLPTEHYCISWGKQNSGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKQK
Ga0335065_0702631_69_398	3300034200	Freshwater	MLTIENIESLNDTYLSAWQVAEAKASKPTKWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYGNFDNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKG
Ga0335052_0223609_17_355	3300034279	Freshwater	MLTIQNIEKLNDTHLSAWQVAEAKASKPTKWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYGNFDNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKQSKP
Ga0335007_0174657_1070_1402	3300034283	Freshwater	MLTIENIEKLNDTYLGYWQVAEAKARRPVKWLLTEHYCISLGRGGDGAAILIDRNINGLTKQYHVYVCYDSFDNKIYEGSFSKRVIMDKGHFLKHMMGYIKAEHALRNKK
Ga0335007_0551623_47_376	3300034283	Freshwater	MLTIENIESLNDTYLSAWQVAEAKASKPTKWLPTEHYSISLGRANDGAAILIDRWINPLTKQYHVYVCYGNFDNRIYEGSFSKRVIMDKGHFLANMMGYVKHEYEMRKK
Ga0335013_0480782_405_743	3300034284	Freshwater	MLTIKNIEKLNDTHLSAWQVAEAKACKPRNWLPTEHYCISLGKQNSGAAILIDRWINPLTKQYHVYVCYDEFSNRIYEGSFSKRVIMDKGHFLKNMMGYVNAEYEMRKQSKP
Ga0335013_0813569_43_372	3300034284	Freshwater	MLTIKNIESLNDTKLGYWQVAEAKASRPKKWLPTEHYSISLGRANDGAAILIDRNINGLTKQYHVYVCYDSFDNKIYEGAFTKRVIMDKGHFLANMMGYVKAEWELRKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090305

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences