Basic Information | |
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Family ID | F090465 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 108 |
Average Sequence Length | 40 residues |
Representative Sequence | MSSKITNQLVLDCIKQMREKTKERKFKQTVELQVALKDYDP |
Number of Associated Samples | 93 |
Number of Associated Scaffolds | 108 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Eukaryota |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 93.52 % |
% of genes from short scaffolds (< 2000 bps) | 100.00 % |
Associated GOLD sequencing projects | 90 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.49 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Eukaryota (98.148 % of family members) |
NCBI Taxonomy ID | 2759 |
Taxonomy | All Organisms → cellular organisms → Eukaryota |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (35.185 % of family members) |
Environment Ontology (ENVO) | Unclassified (42.593 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (66.667 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 43.48% β-sheet: 0.00% Coil/Unstructured: 56.52% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.49 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Lake Freshwater Freshwater, Plankton Freshwater Lake Freshwater Lake Freshwater Lake Sediment Marine Seawater Seawater Aqueous Seawater Marine Ocean Water |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
B570J40625_1010939211 | 3300002835 | Freshwater | MTSKITNQLVLDSIKQMREKTKERKFKQTVELQVALKDYDP* |
Ga0007754_14029233 | 3300004764 | Freshwater Lake | HLIMASKINNALVLSCVKEMREKSKARKFQQTVELQVALKDYDP* |
Ga0007748_101115444 | 3300004769 | Freshwater Lake | THLIMASKINNALVLQCVKEMREKSKARKFQQTVELQVALKDYDP* |
Ga0007752_100409561 | 3300004789 | Freshwater Lake | MASKINNALVLQCVKEMREKSKARKFQQTVELQVALKDYDP* |
Ga0007758_100334011 | 3300004790 | Freshwater Lake | SKINNALVLQCVKEMREKSKARKFQQTVELQVALKDYDP* |
Ga0075487_14422351 | 3300006356 | Aqueous | MSSKITNAQTLECIKQMKDNTKERKFKQTVELQVGIKDYDP* |
Ga0075513_13045672 | 3300006379 | Aqueous | TNAQTLECIKQMKDNTKERKFKQTVELQVGIKDYDP* |
Ga0075488_16255711 | 3300006397 | Aqueous | KVMSSKITNAQTLECIKQMKDNTKERKFKQTVELQVGIKDYDP* |
Ga0099654_105517311 | 3300006415 | Lake | KTHLIMASKINNALVLSCVKEMREKSKARKFQQTVELQVALKDYDP* |
Ga0114341_102430662 | 3300008108 | Freshwater, Plankton | MSSKITNQLVLDCIKQMRENTKERKFKQTVELQVALKDYDP* |
Ga0104258_10420531 | 3300008993 | Ocean Water | KITNALVLECIKEMKKGSKDRKFTQTVELQVGLKDYDP* |
Ga0115007_102635101 | 3300009441 | Marine | MSSKITNALVLECITTMREGAKKRKFTQTVELQVGIKDYDP* |
Ga0115099_101260422 | 3300009543 | Marine | SKITNAFTLECIDKMRKDTKERKFRQTVELQVAIKDYDP* |
Ga0115103_11692881 | 3300009599 | Marine | RAMTSKITNAHTLECIAKMREGTKARKFTQTAELQVAIKDYDP* |
Ga0115100_109394812 | 3300009608 | Marine | LRAMTSKITNAHTLECIAKMREGTKARKFTQTAELQVAIKDYDP* |
Ga0115104_110152942 | 3300009677 | Marine | AGVLDNIATLRETHKARKFKQTVELQVGIKDYDP* |
Ga0129322_10818582 | 3300010306 | Aqueous | FRMSKITNALVLSCIKEMREKSKERKFMQTVELQVALKDYDP* |
Ga0129323_10868992 | 3300010404 | Aqueous | KITNALVLSCIKEMREKSKERKFMQTVELQVALKDYDP* |
Ga0138316_112738633 | 3300010981 | Marine | SKITNALVLECIDDMRKKTKERKFAQTVELQVALKDYDP* |
Ga0138316_112953641 | 3300010981 | Marine | ALVLECIKKMREGTKKRGFTQTVELQVALKDYDP* |
Ga0138326_113678071 | 3300010985 | Marine | TNALVLECIDDMRKKTKERKFAQTVELQVALKDYDP* |
Ga0129349_13447972 | 3300012518 | Aqueous | SKITNALVLDSIKEMREKSKKERKFQETVELQIALKDYDP* |
Ga0157544_10970972 | 3300012713 | Freshwater | TNQLVLDSIKQMREKTKERKFKQTVELQVALKDYDP* |
Ga0157599_10823252 | 3300012715 | Freshwater | KITNQLVLDCIKQMRENTKERKFKQTVELQVALKDYDP* |
Ga0138272_11002901 | 3300012756 | Freshwater Lake | HKVMSSKINNALVLNCIKEMRENSKARKFKQTVELQVSLKDYDP* |
Ga0138270_10539622 | 3300012771 | Freshwater Lake | KINNALVLNCIKEMRENSKARKFKQTVELQVSLKDYDP* |
Ga0138269_12966061 | 3300012778 | Freshwater Lake | LIMASKINNALVLSCVKEMREKSKARKFQQTVELQVALKDYDP* |
Ga0129337_12218961 | 3300012968 | Aqueous | MQSKISNALVLQCIKEMREKSKKRKFTQTVELQIALKDYDP* |
Ga0129332_10678522 | 3300012969 | Aqueous | FRMSKITNALVISCIKEMREKSKERKFMQTVELQVALKDYDP* |
Ga0129338_13114691 | 3300012970 | Aqueous | ITNQLVLDCIKQMREKTKERKFKQTVELQVALKDYDP* |
Ga0170791_131272931 | 3300013295 | Freshwater | KINNALVLQCVKEMREKSKARKFQQTVELQVALKDYDP* |
Ga0170791_163025683 | 3300013295 | Freshwater | MASKINNALVLSCVKEMREKSKARKFQQTVELQVALKDYDP* |
Ga0188862_10113583 | 3300018622 | Freshwater Lake | MSKITNAQTLECIKEMKDKTKERKFKQTVELQVGIKDYDP |
Ga0192974_10326621 | 3300018739 | Marine | MTTQKITNQLVLDCIGEMRGKTKERKFLQTVELQVALKDYDP |
Ga0192978_10371801 | 3300018871 | Marine | IQMTSKITNALVMECIKKMKEGTKKRNFTQTIELQVALKDYDP |
Ga0192978_10460541 | 3300018871 | Marine | SSKITNALVLECIADMKDGCKKRKFTQTVELQVGIKDYDP |
Ga0193030_101252431 | 3300018989 | Marine | HGIFILNMSSKITNALVLDCIKEMREGAKKRKAGIVQTIELQVALKDYDP |
Ga0193569_101712051 | 3300019017 | Marine | MTSKITNQLVLDCISEMKGKSKERKFMQTVELQVALKDYDP |
Ga0193516_101022412 | 3300019031 | Marine | MSSKITAALLKECIEEMRQKTKDRKFKQTVELQVALKDYDP |
Ga0193516_101710151 | 3300019031 | Marine | HGDLLFDIKLRMTSKISNDLVRECIADMREKTKERKFKQTVELQVALKDYDP |
Ga0192981_101625641 | 3300019048 | Marine | MGINNLNRMSSKITNALVLECIADMKDGCKKRKFTQTVELQVGIKDYDP |
Ga0192972_10431562 | 3300019108 | Marine | QKITNQLVLDCIGEMRGKTKERKFLQTVELQVALKDYDP |
Ga0188870_100784223 | 3300019149 | Freshwater Lake | KVMSKITNAQTLECIKEMKDKTKERKFKQTVELQVGIKDYDP |
Ga0188870_100932753 | 3300019149 | Freshwater Lake | RMSSKITNAQILDAIKAIKEGKKKRGFTETFELQVGLKDYDP |
Ga0206687_14005331 | 3300021169 | Seawater | AMSSKITNAFTLECIDKMRKDTKERKFRQTVELQVAIKDYDP |
Ga0206688_100389401 | 3300021345 | Seawater | SKITNALVLDCIKRMRDGTKKRGFTQTVELQVALKDYDP |
Ga0206688_101013961 | 3300021345 | Seawater | MSSKITNAFTLECIDKMRKDTKERKFRQTVELQVAIKDYDP |
Ga0206692_13275362 | 3300021350 | Seawater | FFKAMSSKITNAFTLECIDKMRKDTKERKFRQTVELQVAIKDYDP |
Ga0206692_17070711 | 3300021350 | Seawater | RMSKITNQLALDCIKTMKDKTKERKFKQTVELQVGIKDYDP |
Ga0206693_16181031 | 3300021353 | Seawater | KITNALVLECIKKMKEGTKKRNFTQTVELQVALKDYDP |
Ga0206689_103677043 | 3300021359 | Seawater | SSKITNALVLDCIKRMRDGTKKRGFTQTVELQVALKDYDP |
Ga0194117_104931082 | 3300021424 | Freshwater Lake | MSSKITNQLVLDCIKQMREKTKERKFKQTVELQVALKDYDP |
Ga0063107_1000831 | 3300021869 | Marine | MSSKITNALVLECITTMREGAKKRKFTQTVELQVGIKDYDP |
Ga0063132_1053351 | 3300021872 | Marine | SKITNALVLECIKQMREGAKKRKFTQTVELQVGIKDYDP |
Ga0063113_1186851 | 3300021879 | Marine | MSSKITNALVLECIKDMRAGTKDRKFAQTVELQVALKDYDP |
Ga0063125_10073581 | 3300021885 | Marine | SKITNAGVLDCIKNMREKTKARKFKQTVELQVGIKDYDP |
Ga0063125_10150411 | 3300021885 | Marine | QMSSKITNKIVLEAIENMKEATKKRKFTQTVELQVAIKDYDP |
Ga0063105_10013691 | 3300021887 | Marine | SSKITNAIVLECIKTMRDGAKKRKFTQTVELQVGIKDYDP |
Ga0063089_10220621 | 3300021889 | Marine | AMSSKITNALVLDCIKTMREGAKKRKFTQTVELQVGIKDYDP |
Ga0063144_11528011 | 3300021899 | Marine | KITAALLKECIEEMRTKTKDRKFKQTVELQVALKDYDP |
Ga0063086_10178991 | 3300021902 | Marine | SKITNTLVLECVKTMREGAKKRKFTQTVELQVGIKDYDP |
Ga0063087_10456641 | 3300021906 | Marine | SKITNALVLDCIKTMREGAKKRKFTQTVELQVGIKDYDP |
Ga0063100_10012601 | 3300021910 | Marine | DMSSKITNAIVLECIKTMRDGAKKRKFTQTVELQVGIKDYDP |
Ga0063104_10011031 | 3300021913 | Marine | KDMSSKITNAIVLECIKTMRDGAKKRKFTQTVELQVGIKDYDP |
Ga0063869_10347591 | 3300021922 | Marine | KITNALVLESIKDMREGSKVRKFTQTVELQVALKDYDP |
Ga0063103_10044251 | 3300021927 | Marine | MSSKITNQLVLDCIKTMREGAKKRKFTQTVELQVGIKDYDP |
Ga0063103_10966901 | 3300021927 | Marine | SSKISNNLVLECITQMREGTKKRNFTQTVELQVAIKDYDP |
Ga0063134_11768011 | 3300021928 | Marine | NALVLDCIKEMREGAKKRKAGIVQTIELQVALKDYDP |
Ga0063102_10145841 | 3300021941 | Marine | SSKITNQLVLDCIKTMREGAKKRKFTQTVELQVGIKDYDP |
Ga0063094_10008731 | 3300021943 | Marine | SSKITNALVLECITTMREGAKKRKFTQTVELQVGIKDYDP |
Ga0063755_10822221 | 3300021954 | Marine | ITNALVLDCIKTMREGAKKRKFTQTVELQVGIKDYDP |
Ga0228694_1153991 | 3300023567 | Seawater | MSSKITNTGVVENIKNMREKSKARKFKQTVELQVGIKDYDP |
Ga0228681_10164751 | 3300023683 | Seawater | KMSKISNALVLECIADMREKSKERKFKQTVELQVSLKDYDP |
Ga0228684_10559511 | 3300023704 | Seawater | NALVLDCIKEMREKSKKERKFKETVELQIALKDYDP |
Ga0247591_10717232 | 3300026434 | Seawater | KITNALVLDCIKEMREKSKKERKFKETVELQIALKDYDP |
Ga0247594_10410072 | 3300026448 | Seawater | SSKITNTGVVENIKNMREKSKARKFKQTVELQVGIKDYDP |
Ga0247600_10335681 | 3300026461 | Seawater | ISNALVLECIADMREKSKERKFKQTVELQVSLKDYDP |
Ga0247588_11004301 | 3300026465 | Seawater | TNSHTLECIAQMRERTKERKFRQTVELQVAIKDYDP |
Ga0247603_10345941 | 3300026468 | Seawater | KISNALVLECIADMREKSKERKFKQTVELQVSLKDYDP |
Ga0247599_11235661 | 3300026470 | Seawater | ITNALVLDCIKEMREKSKKERKFKETVELQIALKDYDP |
Ga0247571_10668542 | 3300026495 | Seawater | MSSKITNSHTLECIAQMRERTKERKFRQTVELQVAIKDYDP |
Ga0247571_11585342 | 3300026495 | Seawater | DKMSKISNALVLECIADMREKSKERKFKQTVELQVSLKDYDP |
Ga0247592_10752991 | 3300026500 | Seawater | MSSKIANSHTLECIAQMRERTKERKFRQTVELQVAIKDYDP |
Ga0247605_10789041 | 3300026503 | Seawater | SMSSKITNSHTLECIAQMRERTKERKFRQTVELQVAIKDYDP |
Ga0209499_11443081 | 3300027712 | Freshwater Lake | MASKINNALVLSCVKEMREKSKARKFQQTVELQVALKDYDP |
Ga0247582_10865261 | 3300028109 | Seawater | ESMSSKITNSHTLECIAQMRERTKERKFRQTVELQVAIKDYDP |
Ga0256413_11727772 | 3300028282 | Seawater | SSKITNTHTLQCIEAMRKKTKERKFKQTIELQVGIKDYDP |
Ga0304731_116719712 | 3300028575 | Marine | SKITNALVLECIDDMRKKTKERKFAQTVELQVALKDYDP |
Ga0307401_101743732 | 3300030670 | Marine | TSKITNALVMECIKKMKEGTKKRNFTQTIELQVALKDYDP |
Ga0307401_101823441 | 3300030670 | Marine | NMTTQKITNQLVLDCIGEMRGKTKERKFLQTVELQVALKDYDP |
Ga0307401_102516241 | 3300030670 | Marine | KITNALVLECIADMKDGCKKRKFTQTVELQVGIKDYDP |
Ga0307398_102767511 | 3300030699 | Marine | GMSSKITNALVLECIKKMKEGTKKRNFTQTVELQVALKDYDP |
Ga0307399_102581831 | 3300030702 | Marine | RMSSKITNALVLECIADMKDGCKKRKFTQTVELQVGIKDYDP |
Ga0307388_106883981 | 3300031522 | Marine | TQKITNQLVLDCIGEMRGKTKERKFLQTVELQVALKDYDP |
Ga0307386_105028891 | 3300031710 | Marine | VMSSKITNTQTLDCITAMRKKTKERKFKQTVELQVGIKDYDP |
Ga0307381_101163171 | 3300031725 | Marine | KITNQLVLDSIADMRGKTKERKFLQTVELQVALKDYDP |
Ga0307397_101790682 | 3300031734 | Marine | FCFKIQMTSKITNALVMECIKKMKEGTKKRNFTQTIELQVALKDYDP |
Ga0307383_101838113 | 3300031739 | Marine | TTQKITNQLVLDSIADMRGKTKERKFLQTVELQVALKDYDP |
Ga0307383_102811121 | 3300031739 | Marine | KITNTQTLDCITAMRKKTKERKFKQTVELQVGIKDYDP |
Ga0307383_104151881 | 3300031739 | Marine | MSSKITNKIVLEAIESMKEATKKRKFTQTVELQVAIKDYDP |
Ga0307395_101700881 | 3300031742 | Marine | MTSKITNALVMECIKKMKEGTKKRNFTQTIELQVALKDYDP |
Ga0307395_103718561 | 3300031742 | Marine | SKITNALVLECIADMKDGCKKRKFTQTVELQVGIKDYDP |
Ga0314779_10124723 | 3300032150 | Sediment | ATSSKITNAQVLECIKEMREGTKARKFQQTVELQISLKDYDP |
Ga0314689_104698382 | 3300032518 | Seawater | SKITNSQTLECIKEMKDKTKERKFKQTVELQVGIKDYDP |
Ga0314680_103432402 | 3300032521 | Seawater | VMSKITNSQTLECIKEMKDKTKERKFKQTVELQVGIKDYDP |
Ga0314685_104994611 | 3300032651 | Seawater | KVMSKITNSQTLECIKEMKDKTKERKFKQTVELQVGIKDYDP |
Ga0314686_103658381 | 3300032714 | Seawater | NSQTLECIKEMKDKTKERKFKQTVELQVGIKDYDP |
Ga0314701_103282451 | 3300032746 | Seawater | MSKITNSQTLECIKEMKDKTKERKFKQTVELQVGIKDYDP |
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