Metagenome Family F090649

Basic Information
Family ID	F090649
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	41 residues
Representative Sequence	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKEGSSRETHGKD
Number of Associated Samples	90
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.48 %
% of genes near scaffold ends (potentially truncated)	23.15 %
% of genes from short scaffolds (< 2000 bps)	76.85 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (94.444 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.741 % of family members)
Environment Ontology (ENVO)	Unclassified (27.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.111 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 66.67% β-sheet: 0.00% Coil/Unstructured: 33.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02632	BioY	34.26
PF00557	Peptidase_M24	28.70
PF02621	VitK2_biosynth	13.89
PF05195	AMP_N	4.63
PF13407	Peripla_BP_4	3.70
PF13641	Glyco_tranf_2_3	0.93
PF09335	SNARE_assoc	0.93
PF04055	Radical_SAM	0.93
PF02481	DNA_processg_A	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG1268	Biotin transporter BioY	Coenzyme transport and metabolism [H]	34.26
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	13.89
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	4.63
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.85
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.93
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.44 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.44 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.44 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	92.59 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	45.37 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	45.37 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	45.37 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.30 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.48 %
Unclassified	root	N/A	5.56 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.56 %
Unclassified	root	N/A	5.56 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02HSJVZ	Not Available	520	Open in IMG/M
3300001160\|JGI12654J13325_1008165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300002245\|JGIcombinedJ26739_100007705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8524	Open in IMG/M
3300002245\|JGIcombinedJ26739_100102471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2681	Open in IMG/M
3300002245\|JGIcombinedJ26739_100907612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300002245\|JGIcombinedJ26739_101297026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300004463\|Ga0063356_102615935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300005175\|Ga0066673_10180077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1194	Open in IMG/M
3300005177\|Ga0066690_10218215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1273	Open in IMG/M
3300005340\|Ga0070689_100662185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300005367\|Ga0070667_102052579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300005434\|Ga0070709_10034310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3076	Open in IMG/M
3300005439\|Ga0070711_100075209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2391	Open in IMG/M
3300005439\|Ga0070711_100301763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1274	Open in IMG/M
3300005445\|Ga0070708_100005746	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9841	Open in IMG/M
3300005445\|Ga0070708_101409957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300005536\|Ga0070697_102008287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300005538\|Ga0070731_10208597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300005547\|Ga0070693_100298637	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1085	Open in IMG/M
3300005995\|Ga0066790_10000271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	18246	Open in IMG/M
3300006028\|Ga0070717_11576216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300006041\|Ga0075023_100222065	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006041\|Ga0075023_100590356	Not Available	515	Open in IMG/M
3300006047\|Ga0075024_100627624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300006050\|Ga0075028_100581796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300006057\|Ga0075026_100858251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300006059\|Ga0075017_100969666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300006176\|Ga0070765_100863761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300006854\|Ga0075425_100901474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300006914\|Ga0075436_100094191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2083	Open in IMG/M
3300007076\|Ga0075435_101718515	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	551	Open in IMG/M
3300007788\|Ga0099795_10282502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300009038\|Ga0099829_10003763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	8939	Open in IMG/M
3300009038\|Ga0099829_10025070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4167	Open in IMG/M
3300009088\|Ga0099830_10133128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1895	Open in IMG/M
3300009092\|Ga0105250_10357719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300009098\|Ga0105245_10242801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1746	Open in IMG/M
3300009551\|Ga0105238_10699584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300010371\|Ga0134125_10731354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1090	Open in IMG/M
3300010403\|Ga0134123_12120064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300011270\|Ga0137391_11545427	Not Available	508	Open in IMG/M
3300012205\|Ga0137362_11210251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300012208\|Ga0137376_10160304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1938	Open in IMG/M
3300012212\|Ga0150985_123044596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2198	Open in IMG/M
3300012469\|Ga0150984_108677176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	935	Open in IMG/M
3300012685\|Ga0137397_10169938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1618	Open in IMG/M
3300012917\|Ga0137395_10685441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	741	Open in IMG/M
3300012927\|Ga0137416_10576762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	977	Open in IMG/M
3300012955\|Ga0164298_10972972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300012960\|Ga0164301_11892959	Not Available	504	Open in IMG/M
3300013297\|Ga0157378_10346471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300014498\|Ga0182019_11286789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300017927\|Ga0187824_10299846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300017930\|Ga0187825_10026643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1945	Open in IMG/M
3300017930\|Ga0187825_10047388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1455	Open in IMG/M
3300017936\|Ga0187821_10376668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300019789\|Ga0137408_1187805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3363	Open in IMG/M
3300019879\|Ga0193723_1033217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1550	Open in IMG/M
3300019881\|Ga0193707_1004128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5178	Open in IMG/M
3300020015\|Ga0193734_1004337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2580	Open in IMG/M
3300020061\|Ga0193716_1003310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8864	Open in IMG/M
3300020199\|Ga0179592_10440666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300020579\|Ga0210407_10270542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1325	Open in IMG/M
3300020579\|Ga0210407_10557464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300020579\|Ga0210407_10708762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300020580\|Ga0210403_10021634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5137	Open in IMG/M
3300021088\|Ga0210404_10317556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300021170\|Ga0210400_11601705	Not Available	514	Open in IMG/M
3300021178\|Ga0210408_10045494	All Organisms → cellular organisms → Bacteria → Acidobacteria	3438	Open in IMG/M
3300021344\|Ga0193719_10098762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1269	Open in IMG/M
3300021420\|Ga0210394_11225796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300021432\|Ga0210384_11871755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300021432\|Ga0210384_11887958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300021478\|Ga0210402_11153352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300024181\|Ga0247693_1056918	Not Available	572	Open in IMG/M
3300024330\|Ga0137417_1141071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300025899\|Ga0207642_11040319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300025929\|Ga0207664_11603892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300026294\|Ga0209839_10001496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11945	Open in IMG/M
3300027605\|Ga0209329_1087332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300027610\|Ga0209528_1027553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1256	Open in IMG/M
3300027651\|Ga0209217_1008284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3437	Open in IMG/M
3300027667\|Ga0209009_1147765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300027846\|Ga0209180_10005770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6248	Open in IMG/M
3300027846\|Ga0209180_10086768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1772	Open in IMG/M
3300027862\|Ga0209701_10072678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2175	Open in IMG/M
3300027862\|Ga0209701_10085884	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1979	Open in IMG/M
3300027894\|Ga0209068_10486314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300027910\|Ga0209583_10021480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2049	Open in IMG/M
3300027910\|Ga0209583_10685492	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300027915\|Ga0209069_10201447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1015	Open in IMG/M
3300027915\|Ga0209069_10269332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300027915\|Ga0209069_10669037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300028047\|Ga0209526_10032080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3693	Open in IMG/M
3300028047\|Ga0209526_10090217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2158	Open in IMG/M
3300028828\|Ga0307312_10248326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1151	Open in IMG/M
3300031231\|Ga0170824_106930684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300031446\|Ga0170820_15039002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300031474\|Ga0170818_114809136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1222	Open in IMG/M
3300031720\|Ga0307469_10142078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1780	Open in IMG/M
3300031720\|Ga0307469_10281140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1359	Open in IMG/M
3300031820\|Ga0307473_10849761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300031962\|Ga0307479_10056155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3792	Open in IMG/M
3300032180\|Ga0307471_102501663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300032770\|Ga0335085_10011596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	13063	Open in IMG/M
3300032828\|Ga0335080_11634137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	634	Open in IMG/M
3300032829\|Ga0335070_10766736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300034195\|Ga0370501_0020207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1939	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.89%
Host-Associated	Host-Associated	11.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.07%
Aquatic	Environmental → Aquatic	14.81%
Plants	Host-Associated → Plants	11.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.07%
Sediment	Environmental → Aquatic → Sediment	11.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Freshwater	Environmental → Aquatic → Freshwater	3.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.30%
Loam	Environmental → Terrestrial → Soil → Loam	21.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001160	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090649

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_08361140	2170459005	Grass Soil	MIWLFLILALSTVAVALVGLAAYLRVRGHMKEGSPKETHEKD
JGI12654J13325_10081651	3300001160	Forest Soil	MIWLFLILALSTVAVFLVGLAAYLRVRRHMKEAASREGPGKE*
JGIcombinedJ26739_1000077058	3300002245	Forest Soil	MIWLFLILALSTIAVSLVGLAAYLRVRSHMKEGSSRETHGKD*
JGIcombinedJ26739_1001024714	3300002245	Forest Soil	MIWLFLILALSTVAVLLVGIAAYLRVRRHAKEASGEAHSKD*
JGIcombinedJ26739_1009076121	3300002245	Forest Soil	MIWLFLILALSTVAVSLVGLAAYLRVRQHMKGAAPRETPGKE*
JGIcombinedJ26739_1012970262	3300002245	Forest Soil	MIWLFLILALSTVAVLLVGIAAYLRVRRHVKEASGEAHGKD*
Ga0063356_1026159352	3300004463	Arabidopsis Thaliana Rhizosphere	MIWLFLILALSTVAVALVGLAAYLRVRSHMKESSSRETHGKE*
Ga0066673_101800771	3300005175	Soil	MILWFLVLALSGVAVLLVGIAAYLRVRGHMKEASSSEAGSKN*
Ga0066690_102182151	3300005177	Soil	MIWWFLVLALSGVAVLLVGIAAYLRVRGHMKEASSSEARSKN*
Ga0070689_1006621852	3300005340	Switchgrass Rhizosphere	MIWLFLILALSTVAVGLVGLAAYLRVRSHMKESSSRETHGKE*
Ga0070667_1020525792	3300005367	Switchgrass Rhizosphere	MIWLFLILALSTVAVGLVGLAAYLRVRGHMKEGSPKETHEKD*
Ga0070709_100343102	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSRETHGKD*
Ga0070711_1000752093	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIWLFLILALSTVAVALVGLAAYLRVRGHMKEGSPKETHEKD*
Ga0070711_1003017632	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKEGSSRETHGKD*
Ga0070708_1000057465	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIWLFLILALSAVSVSLVGLATYLRVRRHMKEASSRETHGKD*
Ga0070708_1014099571	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSREPHGKD*
Ga0070697_1020082872	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	WWFLILALSAVSVSLVGLATYLRIRRHMKEASSRETHGKD*
Ga0070731_102085971	3300005538	Surface Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSRETHGKE*
Ga0070693_1002986372	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MIWLFLILALSAVSVSLVGLATYLRIRRHLKEASSRETHGKD*
Ga0066790_100002714	3300005995	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSRETHGRD*
Ga0070717_115762162	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QVIVRMIWLFLILALSTVSVSLVGLAAYLRVRRHMKDGASRETHGKE*
Ga0075023_1002220652	3300006041	Watersheds	MIWLFLILALSTVAVFLVGLAAYLRVRRHMKEAASKNGPGGE*
Ga0075023_1005903561	3300006041	Watersheds	MIWLFLILGLSTVAVFLVGIAAYLRVRRHMKEASSREGHGKE*
Ga0075024_1006276241	3300006047	Watersheds	MIWMFLILALSTVAVSLVGLAAYLRVRQHMKDAASRESPGKD*
Ga0075028_1005817962	3300006050	Watersheds	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDSSSRENHGKD*
Ga0075026_1008582512	3300006057	Watersheds	MIWLFLILALSTVAVSLVGLAAYLRVRGHMKDGASKETHEKD*
Ga0075017_1009696662	3300006059	Watersheds	FLILALSTVAVSLVGLAAYLRVRGHMKDGTRKDTHEKD*
Ga0070765_1008637611	3300006176	Soil	LILALSTVAVSLVGLAAYLRVRSHMKEGSSRETHGKD*
Ga0075425_1009014742	3300006854	Populus Rhizosphere	MIWLFLILALSAVSVSLVGLATYLRIRRQMKEASSRETHGKD*
Ga0075436_1000941911	3300006914	Populus Rhizosphere	MIWLFLILALSAVSVSLVGLATYLRVRRHMKEASPRETHGK
Ga0075435_1017185152	3300007076	Populus Rhizosphere	MIWLFLILALSTVAVSLVGLAAYLRVRRHMKEASAREGHGRD*
Ga0099795_102825022	3300007788	Vadose Zone Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDSSSREPHGKD*
Ga0099829_100037638	3300009038	Vadose Zone Soil	MFLILALSTVAVSLVGLAAYLRVRQHMKDAASRETPGKD*
Ga0099829_100250702	3300009038	Vadose Zone Soil	MIWLFLILALSAVSVSLVGLATYLRVRRHMKESSSRETHGKD*
Ga0099830_101331282	3300009088	Vadose Zone Soil	MIWMFLILALSTVAVSLVGLAAYLRVRQHMKDAASRETPGKD*
Ga0105250_103577192	3300009092	Switchgrass Rhizosphere	ALSTVAVALVGLAAYLRVRSHMKESSSRETHGKE*
Ga0105245_102428012	3300009098	Miscanthus Rhizosphere	MIWLFLILALSTVAVGLLGLAAYLRVRSHMKESSSRETHGKE*
Ga0105238_106995842	3300009551	Corn Rhizosphere	MIWLFLILALSTVAVGLVGLAAYLRVRSHMKESSSRETHGK
Ga0134125_107313542	3300010371	Terrestrial Soil	MIWLFLILALSTVAVSLVGLAAYLRVRVHMKESSSKEPHSKD*
Ga0134123_121200642	3300010403	Terrestrial Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSRESHGKD*
Ga0137391_115454271	3300011270	Vadose Zone Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHLKEGSSRETHGKD*
Ga0137362_112102512	3300012205	Vadose Zone Soil	MIWLFLILALSTVSVSLVGLAAYLRVRRHIKEEAASRETHGKE*
Ga0137376_101603043	3300012208	Vadose Zone Soil	MIWLFLILALSAVSVSLVGLATYLRIRRHMKQASSRETHGKD*
Ga0150985_1230445965	3300012212	Avena Fatua Rhizosphere	VRMIWLFLILALSTVAVALVGLAGYLRVRGHMKDGGSKETHEKD*
Ga0150984_1086771761	3300012469	Avena Fatua Rhizosphere	IWLFLILALSTVAVALVGLAGYLRVRGHMKDGGSKETHEKD*
Ga0137397_101699383	3300012685	Vadose Zone Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKYGTSREPHGKD*
Ga0137395_106854412	3300012917	Vadose Zone Soil	MIWLFLILALSTVAVFLVGLAAYLRVRRHMKEASAREIHMKD*
Ga0137416_105767622	3300012927	Vadose Zone Soil	MIWLFLILALSTVAVFLVGLAAYLRVRRHMKEASAREAHGKD*
Ga0164298_109729722	3300012955	Soil	MIWLFLILALSTVAVALVGLAAYLRVRSHMKESSS
Ga0164301_118929592	3300012960	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKEGSSRETHGKE*
Ga0157378_103464713	3300013297	Miscanthus Rhizosphere	MIWLFLILALSAVSVAAVSLKTKLRIRRHLKEASSRETHGKD*
Ga0182019_112867891	3300014498	Fen	MIWLFLILALSTVAVSLVGLAAYLRVRGHMKDGTPKDTHDKD*
Ga0187824_102998462	3300017927	Freshwater Sediment	MIWLFLILALSTVAVSLVGLAAYLRVRQHMKDAAARESPGKE
Ga0187825_100266431	3300017930	Freshwater Sediment	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDASR
Ga0187825_100473883	3300017930	Freshwater Sediment	MIWLFLILALSTVAVSLVGLAAYLRVRQHMKDAAARESAGKE
Ga0187821_103766681	3300017936	Freshwater Sediment	FLILALSTVAVSLVGLAAYLRVRQHMKDAAARESPGKE
Ga0137408_11878052	3300019789	Vadose Zone Soil	MIWLFLILALSAVSVSLVGLATYLRVRRHMKEASSRETHGKD
Ga0193723_10332171	3300019879	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMRDGSSREPHGKD
Ga0193707_10041284	3300019881	Soil	MIWLFLILALSTVSVTLVGLAAYLRVRRHMKETSSRETHGKD
Ga0193734_10043372	3300020015	Soil	MIWLFLILALSAVSVSLVGLATYLRVRRHMKEASPRETHGKD
Ga0193716_10033105	3300020061	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRGHMKDGAPKETHDKD
Ga0179592_104406662	3300020199	Vadose Zone Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSREPHGKD
Ga0210407_102705422	3300020579	Soil	MIWMFLILALSTVAVSLVGLAAYLRVRQHMKDAASRETPGKD
Ga0210407_105574642	3300020579	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRQHMKGAAPREPPGKE
Ga0210407_107087622	3300020579	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSRETHGKD
Ga0210403_100216341	3300020580	Soil	WLFLILALSTVAVSLVGLAAYLRVRQHMKGAAPREPPGKE
Ga0210404_103175561	3300021088	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSRETHG
Ga0210400_116017052	3300021170	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKEGSSGETHGKD
Ga0210408_100454944	3300021178	Soil	LALSTVAVSLVGLAAYLRVRSHMKEGSSRETHGKD
Ga0193719_100987622	3300021344	Soil	MIWLFLILALSTVAVGLVGLAAYLRVRSHMKVSSSRETHGKE
Ga0210394_112257962	3300021420	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRQHMKGAAPRETPGKE
Ga0210384_118717551	3300021432	Soil	MIWMFLILALSTVAVSLVGLAAYLRVRQHMKDAASRET
Ga0210384_118879582	3300021432	Soil	MIWLFLILALSTVAVLLVGLAAYLRVRRHMKEAASKDGPGGE
Ga0210402_111533521	3300021478	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKESSSREIHGNGNSKD
Ga0247693_10569182	3300024181	Soil	MIWLFLILALSTVAVALVGLAAYLRVRSHMKESSSRETHGKE
Ga0137417_11410711	3300024330	Vadose Zone Soil	MIWLFLILALSAVSVSLVGLATYLRVRRHMKEASSRETH
Ga0207642_110403192	3300025899	Miscanthus Rhizosphere	MIWLFLILALSTVAVGLVGLAAYLRVRSHMKESSSRETHGKE
Ga0207664_116038921	3300025929	Agricultural Soil	MIWLFLILALSTVSVSLVALAAYLRVRRHMKETPSRETH
Ga0209839_1000149610	3300026294	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSRETHGRD
Ga0209329_10873321	3300027605	Forest Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSS
Ga0209528_10275533	3300027610	Forest Soil	MIWLFLILALSTIAVSLVGLAAYLRVRSHMKEGSSRETHGKD
Ga0209217_10082844	3300027651	Forest Soil	MIWLFLILALSTVAVFLVGLAAYLRVRRHMKEAASREGPGKE
Ga0209009_11477651	3300027667	Forest Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSSRETH
Ga0209180_100057701	3300027846	Vadose Zone Soil	MIWLFLILALSAVSVSLVGLATYLRVRRHMKEASSRETHK
Ga0209180_100867683	3300027846	Vadose Zone Soil	IVRMIWLFLILALSAVSVSLVGLATYLRVRRHMKEASSRETHGKD
Ga0209701_100726783	3300027862	Vadose Zone Soil	MIWLFLILALSAVSVSLVGLATYLRVRRHMKESSSRETHGKD
Ga0209701_100858842	3300027862	Vadose Zone Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKGSSRETHGKD
Ga0209068_104863141	3300027894	Watersheds	MIWLFLILGLSTVAVFLVGIAAYLRVRRHMKEASSREGHGKE
Ga0209583_100214802	3300027910	Watersheds	MIWLFLILALSTVAVSLVGLAAYLRVRGHMKDGTRKDTHEKD
Ga0209583_106854922	3300027910	Watersheds	MIWLFLILALSTVAVFLVGLAAYLRVRRHMKEAASKNGPGGE
Ga0209069_102014472	3300027915	Watersheds	MVRMIWLFLILALSTVAVFLVGLAAYLRVRRHMKEAASKNGPGGE
Ga0209069_102693321	3300027915	Watersheds	MIWLFLILALSTVAVSLVGLAAYLRVRGHMKDGASKETHEKD
Ga0209069_106690372	3300027915	Watersheds	MIWMFLILALSTVAVSLVGLAAYLRVRQHMKDAASRESPGKD
Ga0209526_100320803	3300028047	Forest Soil	MIWLFLILALSTVAVLLVGIAAYLRVRRHAKEASGEAHSKD
Ga0209526_100902172	3300028047	Forest Soil	MIWLFLILALSTVAVLLVGIAAYLRVRRHVKEASGEAHGKD
Ga0307312_102483263	3300028828	Soil	MIWLFLILALSAVSVSLVGLATYLRIRRHMKEASSRETHGKD
Ga0170824_1069306842	3300031231	Forest Soil	MIWLFLILALSTVSVSLVALAAYLRVRRHMKETPSRETHD
Ga0170820_150390022	3300031446	Forest Soil	MIWLFLILALSTIAVALVGLAAYLRVRGHMKDGTPKETHEKD
Ga0170818_1148091362	3300031474	Forest Soil	MIWLFLILALSTVAVSLVGLAAYLRVRGHMKDGTPKETHEKD
Ga0307469_101420781	3300031720	Hardwood Forest Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHLKDGSSREPHGKD
Ga0307469_102811401	3300031720	Hardwood Forest Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKEGSSKETHGKD
Ga0307473_108497612	3300031820	Hardwood Forest Soil	MIWLFLILALSTVAVFLVGLAAYLRVRRHMKEAASRESPGKE
Ga0307479_100561554	3300031962	Hardwood Forest Soil	MFLILALSTVAVSLVGLAAYLRVRQHMKDAASRETPGKD
Ga0307471_1025016631	3300032180	Hardwood Forest Soil	MIWLFLILALSTVAVLLVGIAAYLRVRRHVKEAASGEAHGKD
Ga0335085_100115964	3300032770	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKESSSRETHSKE
Ga0335080_116341372	3300032828	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKESASRETHGKE
Ga0335070_107667361	3300032829	Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHMKDGSPRDPHGKD
Ga0370501_0020207_222_350	3300034195	Untreated Peat Soil	MIWLFLILALSTVAVSLVGLAAYLRVRSHLKDGSSRETHGKD

Hidden Markov Model


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