Metagenome / Metatranscriptome Family F090792

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090792
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	91 residues
Representative Sequence	MEARFTDDEKGLLEHAFQLRESQTEEQRAIMRAEFEANWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGP
Number of Associated Samples	76
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.41 %
% of genes near scaffold ends (potentially truncated)	23.15 %
% of genes from short scaffolds (< 2000 bps)	77.78 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.926 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.852 % of family members)
Environment Ontology (ENVO)	Unclassified (36.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.037 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.02% β-sheet: 0.00% Coil/Unstructured: 42.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.1.4.1: Bcl-2 inhibitors of programmed cell death	d1ddba_	1ddb	0.59113
f.54.1.2: Amino acid antiporter-like	d5j4ia_	5j4i	0.5682
f.1.4.0: automated matches	d6v4ma_	6v4m	0.56771
a.70.2.0: automated matches	d4gkfa_	4gkf	0.55805
c.82.1.0: automated matches	d6vr6a_	6vr6	0.55653

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02586	SRAP	3.70
PF12680	SnoaL_2	2.78
PF14014	DUF4230	2.78
PF01904	DUF72	1.85
PF00069	Pkinase	1.85
PF01548	DEDD_Tnp_IS110	1.85
PF08734	GYD	1.85
PF00078	RVT_1	0.93
PF14417	MEDS	0.93
PF00578	AhpC-TSA	0.93
PF02652	Lactate_perm	0.93
PF03544	TonB_C	0.93
PF09825	BPL_N	0.93
PF12686	DUF3800	0.93
PF12728	HTH_17	0.93
PF01565	FAD_binding_4	0.93
PF16640	Big_3_5	0.93
PF13204	DUF4038	0.93
PF07589	PEP-CTERM	0.93
PF03951	Gln-synt_N	0.93
PF02687	FtsX	0.93
PF09828	Chrome_Resist	0.93
PF01068	DNA_ligase_A_M	0.93
PF08447	PAS_3	0.93
PF13185	GAF_2	0.93
PF00072	Response_reg	0.93
PF00196	GerE	0.93
PF02567	PhzC-PhzF	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.41
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	3.70
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.85
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.85
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	0.93
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.93
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.93
COG1620	L-lactate permease	Energy production and conversion [C]	0.93
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
All Organisms	root	All Organisms	49.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
cellular organisms	root	All Organisms → cellular organisms	49.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.70 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.96 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	3.70 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.78 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.96 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	3.70 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	1.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.96 %
Thiocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa	3.70 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1.85 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.93 %
Aerococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Aerococcaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.96 %
unclassified Thiocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa	3.70 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1.85 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.93 %
Aerococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Aerococcaceae → Aerococcus	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.96 %
Thiocapsa sp. KS1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	3.70 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1.85 %
Aerococcus viridans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Aerococcaceae → Aerococcus → Aerococcus viridans	0.93 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0684029	Not Available	502	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101688775	Not Available	745	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101690483	Not Available	700	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1009723	All Organisms → cellular organisms → Bacteria → Acidobacteria	1570	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1014047	Not Available	1032	Open in IMG/M
3300000789\|JGI1027J11758_12963877	Not Available	1059	Open in IMG/M
3300002568\|C688J35102_120346612	Not Available	1004	Open in IMG/M
3300004479\|Ga0062595_102300209	Not Available	531	Open in IMG/M
3300004633\|Ga0066395_10172855	Not Available	1112	Open in IMG/M
3300004633\|Ga0066395_10467012	Not Available	722	Open in IMG/M
3300005332\|Ga0066388_100849262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1499	Open in IMG/M
3300005332\|Ga0066388_104198204	Not Available	734	Open in IMG/M
3300005434\|Ga0070709_10788775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300005434\|Ga0070709_11795852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Aerococcaceae → Aerococcus → Aerococcus viridans	502	Open in IMG/M
3300005435\|Ga0070714_100669370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300005435\|Ga0070714_100669632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300005437\|Ga0070710_10484308	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300005542\|Ga0070732_10952967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005614\|Ga0068856_100937224	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300005764\|Ga0066903_100017521	All Organisms → cellular organisms → Bacteria	7413	Open in IMG/M
3300005764\|Ga0066903_100458728	All Organisms → cellular organisms → Bacteria → Acidobacteria	2135	Open in IMG/M
3300005764\|Ga0066903_100801270	All Organisms → cellular organisms → Bacteria → Acidobacteria	1685	Open in IMG/M
3300005888\|Ga0075289_1070598	Not Available	568	Open in IMG/M
3300006046\|Ga0066652_101060632	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300006173\|Ga0070716_100526445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	877	Open in IMG/M
3300006173\|Ga0070716_101170416	Not Available	616	Open in IMG/M
3300006175\|Ga0070712_101244305	Not Available	648	Open in IMG/M
3300006791\|Ga0066653_10669073	Not Available	533	Open in IMG/M
3300006854\|Ga0075425_101537947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300006871\|Ga0075434_100671886	Not Available	1054	Open in IMG/M
3300009545\|Ga0105237_11845616	Not Available	612	Open in IMG/M
3300009792\|Ga0126374_11143237	Not Available	620	Open in IMG/M
3300009792\|Ga0126374_11197737	Not Available	608	Open in IMG/M
3300010043\|Ga0126380_10130642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	1571	Open in IMG/M
3300010046\|Ga0126384_10865815	Not Available	814	Open in IMG/M
3300010047\|Ga0126382_11819118	Not Available	573	Open in IMG/M
3300010048\|Ga0126373_10110521	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300010048\|Ga0126373_10129159	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300010358\|Ga0126370_10204097	Not Available	1496	Open in IMG/M
3300010358\|Ga0126370_10843780	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300010358\|Ga0126370_12347841	Not Available	529	Open in IMG/M
3300010359\|Ga0126376_10500155	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300010359\|Ga0126376_12596038	Not Available	555	Open in IMG/M
3300010361\|Ga0126378_10505145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	1324	Open in IMG/M
3300010361\|Ga0126378_10562621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300010361\|Ga0126378_10842241	Not Available	1025	Open in IMG/M
3300010361\|Ga0126378_12739597	Not Available	563	Open in IMG/M
3300010366\|Ga0126379_12640656	Not Available	600	Open in IMG/M
3300010376\|Ga0126381_100089052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	3908	Open in IMG/M
3300010376\|Ga0126381_100194417	Not Available	2706	Open in IMG/M
3300010376\|Ga0126381_102537547	Not Available	734	Open in IMG/M
3300010396\|Ga0134126_11804940	Not Available	670	Open in IMG/M
3300010398\|Ga0126383_10419978	All Organisms → cellular organisms → Bacteria → Acidobacteria	1379	Open in IMG/M
3300010398\|Ga0126383_10624355	All Organisms → cellular organisms → Bacteria → Acidobacteria	1151	Open in IMG/M
3300011332\|Ga0126317_10511567	Not Available	1147	Open in IMG/M
3300012206\|Ga0137380_10785493	Not Available	822	Open in IMG/M
3300012209\|Ga0137379_10281706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1574	Open in IMG/M
3300012212\|Ga0150985_116344373	Not Available	564	Open in IMG/M
3300012971\|Ga0126369_10926063	All Organisms → cellular organisms → Bacteria → Acidobacteria	957	Open in IMG/M
3300013307\|Ga0157372_10051227	All Organisms → cellular organisms → Bacteria	4594	Open in IMG/M
3300015371\|Ga0132258_10362082	All Organisms → cellular organisms → Bacteria	3591	Open in IMG/M
3300015371\|Ga0132258_10695512	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300016294\|Ga0182041_10380691	All Organisms → cellular organisms → Bacteria → Acidobacteria	1195	Open in IMG/M
3300016371\|Ga0182034_11822870	Not Available	536	Open in IMG/M
3300016422\|Ga0182039_10376473	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300017936\|Ga0187821_10056149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1415	Open in IMG/M
3300017959\|Ga0187779_11328681	Not Available	510	Open in IMG/M
3300017970\|Ga0187783_10096778	Not Available	2175	Open in IMG/M
3300017970\|Ga0187783_10195531	Not Available	1486	Open in IMG/M
3300017975\|Ga0187782_10552647	Not Available	883	Open in IMG/M
3300018062\|Ga0187784_10054620	All Organisms → cellular organisms → Bacteria → Proteobacteria	3235	Open in IMG/M
3300018085\|Ga0187772_10271925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1	1155	Open in IMG/M
3300018433\|Ga0066667_11124617	Not Available	680	Open in IMG/M
3300018482\|Ga0066669_11820974	Not Available	563	Open in IMG/M
3300021445\|Ga0182009_10020441	Not Available	2500	Open in IMG/M
3300021445\|Ga0182009_10031423	All Organisms → cellular organisms → Bacteria → Acidobacteria	2124	Open in IMG/M
3300021445\|Ga0182009_10036537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2003	Open in IMG/M
3300021445\|Ga0182009_10094112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356	Open in IMG/M
3300021445\|Ga0182009_10288106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300021476\|Ga0187846_10344758	Not Available	614	Open in IMG/M
3300021560\|Ga0126371_10002845	All Organisms → cellular organisms → Bacteria	15030	Open in IMG/M
3300021560\|Ga0126371_10015891	All Organisms → cellular organisms → Bacteria → Acidobacteria	6889	Open in IMG/M
3300021560\|Ga0126371_10143962	All Organisms → cellular organisms → Bacteria → Acidobacteria	2438	Open in IMG/M
3300021560\|Ga0126371_10185192	All Organisms → cellular organisms → Bacteria	2169	Open in IMG/M
3300021560\|Ga0126371_11130590	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300021560\|Ga0126371_11344510	Not Available	847	Open in IMG/M
3300025906\|Ga0207699_10073550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2097	Open in IMG/M
3300025929\|Ga0207664_11190118	Not Available	680	Open in IMG/M
3300025939\|Ga0207665_10334096	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1140	Open in IMG/M
3300025939\|Ga0207665_11005476	Not Available	663	Open in IMG/M
3300026023\|Ga0207677_10970164	Not Available	769	Open in IMG/M
3300026078\|Ga0207702_10075444	All Organisms → cellular organisms → Bacteria → Acidobacteria	2913	Open in IMG/M
3300026078\|Ga0207702_11257790	Not Available	734	Open in IMG/M
3300026116\|Ga0207674_11693540	Not Available	600	Open in IMG/M
3300027371\|Ga0209418_1061100	Not Available	672	Open in IMG/M
3300027842\|Ga0209580_10330709	Not Available	759	Open in IMG/M
3300028792\|Ga0307504_10066813	Not Available	1070	Open in IMG/M
3300031770\|Ga0318521_10991971	Not Available	515	Open in IMG/M
3300031890\|Ga0306925_10186420	All Organisms → cellular organisms → Bacteria	2236	Open in IMG/M
3300031938\|Ga0308175_100344761	Not Available	1537	Open in IMG/M
3300031954\|Ga0306926_11278229	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300031996\|Ga0308176_10110625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2435	Open in IMG/M
3300032001\|Ga0306922_11798031	Not Available	603	Open in IMG/M
3300032059\|Ga0318533_11198640	Not Available	555	Open in IMG/M
3300032076\|Ga0306924_10154842	All Organisms → cellular organisms → Bacteria	2625	Open in IMG/M
3300032770\|Ga0335085_10001865	All Organisms → cellular organisms → Bacteria	42006	Open in IMG/M
3300032783\|Ga0335079_11006414	Not Available	850	Open in IMG/M
3300033412\|Ga0310810_10372908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1489	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.89%
Host-Associated	Host-Associated	11.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.04%
Plants	Host-Associated → Plants	11.11%
Aquatic	Environmental → Aquatic	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.70%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Cave	Environmental → Terrestrial → Cave	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.33%
Loam	Environmental → Terrestrial → Soil → Loam	19.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	26.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_06840291	2228664022	Soil	MENRFTDDEKGLLEQAFQLRESQTEEQRAITRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGPGGPSIERIVWYMLDRAVLMSTKSGP
INPhiseqgaiiFebDRAFT_1016887752	3300000364	Soil	METRFTDDEKGLLEQAFQLRESQTEEQRAILRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGXGGPSIXXIVWYMLXRAVLMSTKSGP*
INPhiseqgaiiFebDRAFT_1016904831	3300000364	Soil	METRFTDDEKGLLEQAFQLRESQTEEQRAILRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGPGGPSIERIVWYMLDRAVLMSTKSGP*
AP72_2010_repI_A01DRAFT_10097234	3300000579	Forest Soil	MRTHITNSIFTDVEKGLLEQAFQLRENQTGEQRAIMRAEFELDWPALVAYIKQSAACGEEMRGDVLFELGEAQGGPSIEKVVWYMLDRAVLMSTKSGS*
AP72_2010_repI_A10DRAFT_10140472	3300000651	Forest Soil	MMGGLVMRTHITNSIFTDVEKGLLEQAFQLRENQTGEQRAIMRAEFELDWPALVAYIKQSAACGEEMRGDVLFELGEAQGGPSIEKVVWYMLDRAVLMSTKSGS*
JGI1027J11758_129638772	3300000789	Soil	MENRFTDDEKGLLEQAFQLRESQTEEQRAITRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGXGGPSIXXIVWYMLXRAVLMSTKSGP*
C688J35102_1203466121	3300002568	Soil	MFTDDEKVLLEHAFQVRESQTEEERATMRAEFERNWPALVAYIKEAEAQGRKMQGDVLFTLGEAQGGPSIDKIVWYLLDRAVLMSTKRAA*
Ga0062595_1023002091	3300004479	Soil	MFTDDEKFLLEHAFQVRESQTEEELAKLRAEFERNWPALVAYLKEAEAQGKKMKGDVLFTLGETQGGPSIDKIVWYLLDRAVLMSTKRAA*
Ga0066395_101728552	3300004633	Tropical Forest Soil	MDNRFTDDEKGLLEQAFHLRESQTEEERATMRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKVVWYMLDRAVLMSTKSGR*
Ga0066395_104670121	3300004633	Tropical Forest Soil	METRFTNDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYLLDRAVLLSTKSRP*
Ga0066388_1008492622	3300005332	Tropical Forest Soil	METRFTNDEKGLLEHAFQLRESQTEEQRAIMRSEFELNWPALVAYVKQSEARGEKMRGDVLFALGEGEGGPSIEKIVWYMLDRAVLMSTKSGP*
Ga0066388_1041982042	3300005332	Tropical Forest Soil	MVTRFSDDERGLLEHAFQLRESQTEEQRAIMRAEFEENWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKPAP*
Ga0070709_107887752	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFTDDEKVLLEHAFQVRESQTEEERAKMRAEFERNWPALVAYIKEAEAQGKKMKGDVLFTLGETQGGPSIEKIVWYLLDRAVLMSTKRAA*
Ga0070709_117958521	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	METRFTDDEKGLLEHAFQLRESQTEEQRAIIRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMGTKSGP*
Ga0070714_1006693702	3300005435	Agricultural Soil	MFTNDERVLLEHAFQLRESQTEEERAKMRAEFETNWPALVAYIKDAEAHGKKMKGDVLFTLCESQDGPSIEMIGWYLLDRAVMHSKRAA*
Ga0070714_1006696322	3300005435	Agricultural Soil	AFQLRESQTEEQRAIIRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMGTKSGP*
Ga0070710_104843082	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MFTDDEKVLLEHAFQVRESQIEEERVTMRAEFERNWPALVAYIKEAEAQAKKMEGDVLFTLGEAHGGPSIEKIVWYLLDRAVLMSTKRAA*
Ga0070732_109529672	3300005542	Surface Soil	MENRFTDDEKGLLEQAFQLRESQTEEQRAIMRAEFEANWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAV
Ga0068856_1009372241	3300005614	Corn Rhizosphere	MFSDDEKALLEHAFQIRESQSEEERAKFRAEFEMNWPELVAYIKETQARGEKMSGAVLFALGEAQGGPSLEKIVWYLLDRAVMHSKRAA*
Ga0066903_1000175214	3300005764	Tropical Forest Soil	METRFSDDEKGLLEHAFQLRESQTEEQRASMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYLLDRAVLLSTKSRP*
Ga0066903_1004587282	3300005764	Tropical Forest Soil	METRFTNDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQKIVWYMVDRAVLMSTKSGL*
Ga0066903_1008012701	3300005764	Tropical Forest Soil	MGTRFTDDESGLLEHAFQLRESQTEEQRALMRTEFELNWPALVAYVKQSEARGEKMRGDVLFALGEGEGGPSIEKIVWYMLDRAVLMSTKSGP*
Ga0075289_10705981	3300005888	Rice Paddy Soil	MFTDDEKVLLEHAFQVRESQTEEERATMRAEFERNWPALVAYLKEAEAQGRKMQGDVLFTLGEAQGGPSVEKIVWYLLDRAVLMSTKRAA*
Ga0066652_1010606322	3300006046	Soil	MFTDDEKVLLEHAFQVRESQTEEERATMRAEFERNWPALVAYIKEAEAQGRKMQGDVLFTLGEALGGPSIDKIVWYLLDRAVLMSTKRAA*
Ga0070716_1005264452	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFTDDEKVLLEHAFQVRESQTEEERAKMRAEFERNWPALVAYIKEAEAQAKKMEGDVLFTLGEAHGGPSIEKIVWYLLDRAVLMSNKRAA*
Ga0070716_1011704161	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	METRFTDDEKGLLEQAFRLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIV
Ga0070712_1012443051	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MFTDDEKVLLEHAFQVRESQTEEERAKMRAEFERNWPALVAYIKEAEAQNEKMKGDVLFTLGETQGGPSIEKIVWYLLDRAVLMSNKRAA*
Ga0066653_106690731	3300006791	Soil	MFTDDEKVLLEHAFQVRESQTEEERATMRAAFERNWPALDAYIKEAEAQGKTMKGDVLFALGEAQGGPSIDKTVWYLLDRAVLMSTKRAA*
Ga0075425_1015379471	3300006854	Populus Rhizosphere	METRFTDDEKGLLEQAFRLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGP*
Ga0075434_1006718862	3300006871	Populus Rhizosphere	METRFTDDEKGLLEQAFRLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYILGRAVLMSTKPGP*
Ga0105237_118456162	3300009545	Corn Rhizosphere	MFIDDEKVLLEHAFQVRESQTEDERAKMRAEFERNWPALVAYMKEAEAQGKKMKGDVLFTLDETQGGPSIEKIVWYLLDSAVLMSTKRAA*
Ga0126374_111432372	3300009792	Tropical Forest Soil	METRFTDDEKGLLEHAFQLRESQTEDQRAIMRAEFEVNWPALVAYIKQSEARGENMRGDVLFALGEGQGGPSIEKIVWYLLDRAVLMSTKSGP*
Ga0126374_111977371	3300009792	Tropical Forest Soil	MGTRFTDDERGLLEHAFQLRESQTEEQRALMRTEFELNWPALVAYVKQSEARGEKMRGDVLFALGEGEGGPSIEKIVWYMLDRAVLMSTKSGP*
Ga0126380_101306422	3300010043	Tropical Forest Soil	METRFTNDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGQKMRGDVLFALGEGQGGPSIQKIVWYMVDRAVLMSTKSGL*
Ga0126384_108658151	3300010046	Tropical Forest Soil	MEPRFTDDEKGLLEHAFQLRESQTEEQRAIMRADFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQKIVWYMVDRAVLMSTKSGL*
Ga0126382_118191181	3300010047	Tropical Forest Soil	METRFTDDEKGLLEHAFQLRESQTEEQRAIMRGEFGVIWPALVAYIKQSEARGENMRGDVLFALGEGPGGPSIEKIVWYM
Ga0126373_101105212	3300010048	Tropical Forest Soil	METRFTDDEKGLLEHAFQLRESQTEDQRAIMRAEFEVNWPALVAYIKQSEARGENMRGDVLFALGEGPGGPSIEKIVWYMLDRAVLMRTKSGP*
Ga0126373_101291592	3300010048	Tropical Forest Soil	MENRFTDDEKGLLEQAFQLRESQTEEQRAIMRAEFEMNWLALVAYVKQSEVRGEKMRGDVLFALGEGQGGPSIEKAV*
Ga0126370_102040972	3300010358	Tropical Forest Soil	MEARFTDDEKGLLEHAFQLRESQTEEQRASMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYLLDRAVLLSTKSRP*
Ga0126370_108437801	3300010358	Tropical Forest Soil	MENRFTDDEKGLLEQAFHLRESQTEEERATMRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKVVWYMLDRAVLMSAKSG
Ga0126370_123478412	3300010358	Tropical Forest Soil	METCFTAGERALLELAFQVRESQTEEQRATVRADFEVKWPALAAYIKQTEARGAKMRGDVLFALGEDRGGPPLEEIVWYILDRAVMMSSKLDL*
Ga0126376_105001551	3300010359	Tropical Forest Soil	MGTRFTDDERGLLEHAFQLRESQTEEQRAIMRSEFELNWPALVAYVKQSEARGEKMRGDVLFALGEGEGGPSIEKIVWYMLDRAVLMSTKSGP*
Ga0126376_125960381	3300010359	Tropical Forest Soil	VRWHFPKFTVAETALLEQAFQVRESQTEGQRAAMRAGFELKWPALVAYIQQAEARGETMNGDVLFALGEHDGGPSIENIVWYMLDRAVAMGTKSARH
Ga0126378_105051452	3300010361	Tropical Forest Soil	METRFTNDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQKLVWYMVDRAVLMSTKSGL*
Ga0126378_105626211	3300010361	Tropical Forest Soil	QAFRVRESQTEEQRAKMRAEFELSWPALVAYIKQTEARGAKMRGDVLFALGEDRGGPPLEEIVWYILDRAVMMSSKLDL*
Ga0126378_108422412	3300010361	Tropical Forest Soil	DNRFTDDEKGLLEQAFHLRESQTEEERATMRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKVVWYMLDRAVLMSTKSGR*
Ga0126378_127395972	3300010361	Tropical Forest Soil	MENRFTDDERGLLEHAFQLRESQTEEQRAIMRSEFAANWPALAAYVKQSEARGEKMKGDVLFALGEGQGGPSIEKIVWYILDRAVLMSTKSGP*
Ga0126379_126406561	3300010366	Tropical Forest Soil	METRFTNDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQKIVWYMVDRAVLMSTKS
Ga0126381_1000890521	3300010376	Tropical Forest Soil	AFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQKIVWYMVDRAVLMSTKSGL*
Ga0126381_1001944174	3300010376	Tropical Forest Soil	AVARLKGMETRFTDDEKGLLEHAFQLRESQTEEQRAIMCVEFEVNWPALVAYITQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYLLDRAVLLSTKSRP*
Ga0126381_1025375471	3300010376	Tropical Forest Soil	VARLKGMKARFTHGEKALLEYAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGKKMRGDVLFALGEGQGGPSIQKIVWYMVDRAVLMSTKSGL*
Ga0134126_118049401	3300010396	Terrestrial Soil	MFSDDEKALLEHAFQIRESQTEEERAKMRAEFEMNWPELVAYIKEAETRGEKMNGAVLFALGEAQAGPSLEKIVWYLLDRAVTHSKRAA*
Ga0126383_104199781	3300010398	Tropical Forest Soil	MGTRYTDDERGLLEHAFQLRESQTEEQRAIMRTEFELNWPALGAYVKQSEARGEKMRGDVLFALGEGEGGPSIEKIVWYMLDRAVLMSTKSGP*
Ga0126383_106243551	3300010398	Tropical Forest Soil	METRFTNDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQKIVWYMVDRAVLMSTKFGL*
Ga0126317_105115673	3300011332	Soil	METSFINDENELLEQAFQARESQNEEQRAAMRGEFEVNWPALAAYIKQAEARGRTMRGDVLFALGEGQGAPSIEKVVWYMLDRAVLMSAKSPQASTHWNTGL*
Ga0137380_107854932	3300012206	Vadose Zone Soil	MFTDDEKVLLEHAFQVRESQTEEERAKMRAEFQRNWPALVAYIKEAEAQGRKMKGDVLFILGEAQGGPSIDKIVWYLLDRAVLMSTKRAA*
Ga0137379_102817062	3300012209	Vadose Zone Soil	MFTDDEKVLLEHAFQVRESQTEEERAKMRAEFQRNWPALVAYIKEAEAQGRKMKGDVLFTLGEAQGGPSIDKIVWYLLDRAVLMSTKRAA*
Ga0150985_1163443732	3300012212	Avena Fatua Rhizosphere	MFTDDEKVLLEHAFQVRESQTEEERATMRAEFERNWPALDAYIKEAEAQGKTMKGDVLFALGEAQGGPSIEKIAWYLLDRAVLMSAKRAA*
Ga0126369_109260632	3300012971	Tropical Forest Soil	MGTRFTDDESGLLEHAFQLRESQTEEQRALMRTEFELNWPALVAYVKQSEARGEKMRGDVLFALGEGEGGPSVEKI
Ga0157372_100512274	3300013307	Corn Rhizosphere	MFTGDEKVLLEHAFQVRESQTEEERAEMRAEFERNWPALVAYIKEAEARGNKMKGDVLFTLGEAQGGPSIEKLVWYLLDRAVLMSTKRAA*
Ga0132258_103620826	3300015371	Arabidopsis Rhizosphere	MGGLVMGTDIKDSIFTDAEKGLLEQAFQLRESQTEKQRAIMRAEFEVNWPALVAYVKQSAARGEEMRGDVLFALGEGQGGPSIEKVVWYMLDWAVLMSTKTGSLKPSLAEYVND*
Ga0132258_106955122	3300015371	Arabidopsis Rhizosphere	VGSHFPSFTDAERALLEQAFQVRESQTEEQRAKMRADFEVRWPALVAYIKQTEARGEQMKSDVLFALGEHQGGPSIEKIVWYMLDRAVVMGRKSIR*
Ga0182041_103806912	3300016294	Soil	MDNRFTDDEKGLLEQAFHLRESQTEEERATMRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYILDRAVLMSTKSGR
Ga0182034_118228701	3300016371	Soil	ALLELAFQVRESQTEEQRATVRADFEVRWPALAAYIKQTEARGAKMRGDVLFALGEDRGGPSLEEIVWYILDRAVMMSSKLDL
Ga0182039_103764732	3300016422	Soil	MEARFTDDGKGLLEHAFQLRESQTEEQRAIMRSEFAANWPALAAYVKQSEARGEKMKGDVLFALGEGQGGPSIEKVVWYMLDRAVLMSTKSGR
Ga0187821_100561491	3300017936	Freshwater Sediment	METRFTDDEKGLLEHAFQLRESQTEEQRASIRAEFEVNWPALVAYIKQSEASGEKMRGDVLFGLGEGQGGPSIEKIVWYMLDRAVPMSTKSGP
Ga0187779_113286811	3300017959	Tropical Peatland	METRFTNDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQTIVWYMLDRAVLMSTKSGL
Ga0187783_100967781	3300017970	Tropical Peatland	METRFTDDEKGLLEQAFQLRESQTLEQRAIMRAEFEVNWPALAAYVKHSEARGEKMRGDVLFELGEGQGGPSVEKIVWYMLDRAVLMSTKSGP
Ga0187783_101955312	3300017970	Tropical Peatland	MQTRFTNDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQTIVWYMLDRAVLMSTKSGP
Ga0187782_105526471	3300017975	Tropical Peatland	KGLLEQAFQLRESQTLEQRAIMRAEFEVNWPALAAYVKHSEARGEKMRGDVLFELGEGQGGPSVEKIVWYMLDRAVLMSTKSGP
Ga0187784_100546205	3300018062	Tropical Peatland	MQTRFTNDEKGLLEHAFQLRENQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQTIVWYMLDRAVLMSTKSGP
Ga0187772_102719251	3300018085	Tropical Peatland	VARLTGMQTRFTNDEKGLLEHAFQLRENQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQTIVWYMLDRAVLMSTKSGP
Ga0066667_111246171	3300018433	Grasslands Soil	MFTDDEKVLLEHAFQVRESQTEEERAKMRVEFQRNWPALVAYIKEAEAQGRKMKGDVLFTLGEAQGGPSIDKIVWYLLDR
Ga0066669_118209741	3300018482	Grasslands Soil	MFTDDEKVLLEHAFQVRESQTEEERATMRAEFERNWPALVAYIKEAEAQGRKMQGDVLFTLGEAQGGPSIDKIVWYLLDRAVLMSTK
Ga0182009_100204411	3300021445	Soil	MFTDDEKVLLEHAFQLRESQTEEERAKMRAEFEINWPALVAYIKDAEAQGKTMKGDVLFALGETQGGASFEKIVWYLLDRAVLMTTKRAA
Ga0182009_100314231	3300021445	Soil	MFTDDEKVLLERAFQVRESQTEEERAKMRAEFERNWPSLVAYIKEAEARGNNMKGDVLFTLGEAQGGPSIEKLVWYLLDRAVLMSTKRAA
Ga0182009_100365374	3300021445	Soil	MFTDDEKFLLEHAFQVRESQTEEERAKMRSEFERNWPALVAYIKEEEAQGKTMKGDVLFTLGETQGGPSIEKIVWYLLDRALLMSTKRAA
Ga0182009_100941123	3300021445	Soil	DDEKFLLEHAFQVRESQTEEERAKMRAEFERNWPALVAYIKEAEAQGKKMKGDVLFTLGETQGGPSIEKIVWYLLDRAVLMSTKRAA
Ga0182009_102881062	3300021445	Soil	MFTDDEKFLLEHAFQVRESQTEEELAKLRAEFERNWPALVAYLKEAEAQGKKMKGDVLFTLGETQGGPSIDKIVWYLLDRAVLMSTKR
Ga0187846_103447582	3300021476	Biofilm	METRFTDDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSNKSGP
Ga0126371_100028455	3300021560	Tropical Forest Soil	MDNRFTDDEKGLLEQAFHLRESQTEEERATMRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKVVWYMLDRAVLMSTKSGR
Ga0126371_100158915	3300021560	Tropical Forest Soil	METRFTNDEKGLLEYAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIQKIVWYMVDRAVLMSTKSGL
Ga0126371_101439622	3300021560	Tropical Forest Soil	MDTRFTDDEKGLLEQAFQLRESQTEEQRALVRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYILDRAVLMSTKSSP
Ga0126371_101851922	3300021560	Tropical Forest Soil	MGTRFTDDESGLLEHAFQLRESQTEEQRALMRTEFELNWPALVAYVKQSEARGEKMRGDVLFALGEGEGGPSIEKIVWYMLDRAVLMSTKSGP
Ga0126371_111305902	3300021560	Tropical Forest Soil	METRFTDDEKGLLEHAFQLRESQTEEQRAFMRAEFEVNWPALVAYIKHSEARGEKMKGDVLFALGEGQGGPSIEKIVWYLLDRAVLMSTKSGH
Ga0126371_113445101	3300021560	Tropical Forest Soil	METCFTAGERALLELAFQVRESQTEEQRATVRADFEVKWPALAAYIKQTEARGTNMRGDVLFALGEDRGGPPLEEIVWYILDRAVMMSSKLDL
Ga0207699_100735503	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MFTDDEKVLLEHAFQVRESQTEEERAKMRAEFERNWPALVAYIKEAEAQGKKMKGDVLFTLGETQGGPSIEKIVWYLLDRALLPLGINPSVP
Ga0207664_111901181	3300025929	Agricultural Soil	PVAPPSSVWEADGVHMFTDDEKVLLEHAFQVRESQTEEERATMRAEFEGNWPALVAYIKEAEAHGKKMKGDVLFTLGEAQGGPSIEKLVWYLLDRAVLMSTKRAA
Ga0207665_103340962	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MFTDDEKVLLEHAFQVRESQTEEERAKMRAEFERNWPALVAYIKEAEAQAKKMEGDVLFTLGEAHGGPSIEKIVWYLLDRAVLMSNKRAA
Ga0207665_110054762	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	METRFTDDEKGLLEQAFRLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGP
Ga0207677_109701641	3300026023	Miscanthus Rhizosphere	LTTNMFTDDEKALLEHAFQIRESQTEEERAKFRAEFEMNWPELVAYIKETQARGEKMSGAVLFALGEAQGGPSLEKIVWYLLDRAVMHSKRAA
Ga0207702_100754445	3300026078	Corn Rhizosphere	MFTDDEEALLEHAFQIRESQTEEERAKMRAEFEMNWPPLVAYIKEAEARGEKMSGAVLFALGEAQGGPSLEKIVWYLLDRAVMHSKRAA
Ga0207702_112577901	3300026078	Corn Rhizosphere	MFTDDEKALLEHAFQIRESQTEEERAKFRAEFEMNWPELVAYIKETQARGEKMSGAVLFALGEAQGGPSLEKIVWYLLDRAVMHSKRAA
Ga0207674_116935402	3300026116	Corn Rhizosphere	MESRFTDDEKGLLEQAFQLRESQTEEQRAMMRAEFEVNWPALVAYVKQSEARGETMRGDVLFALGEGQDGPSIEKIVWYMLDRAVLMSTKSGP
Ga0209418_10611002	3300027371	Forest Soil	MENRFTDDEKGLLEQAFQLRESQTEEERATMRAEFEVNWPALVAYIKQHEARGEKMRGDVLFALGEGQGGPSIEKIVWYILDRAVLMSTKPGR
Ga0209580_103307091	3300027842	Surface Soil	MENRFTDDEKGLLEQAFQLRESQTEEQRAIMRAEFEANWPALVAYVKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGP
Ga0307504_100668131	3300028792	Soil	METRFTDDEKGLLEHAFQLRESQTEEQRAIMRAEFEVNWPALVAYVKQSEARGQKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGP
Ga0318521_109919712	3300031770	Soil	MDNRFTDDEKGLLEQAFHLRESQTEEERATMRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKVVWYMLDRAVLM
Ga0306925_101864202	3300031890	Soil	MEARFTDDEKGLLEHAFQLRESQTEEQRAIMRAEFEANWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGH
Ga0308175_1003447612	3300031938	Soil	MFTGDEKVLLEHAFQVRESQTEEERAEMRAEFERNWPALVAYIKEAEARGNKMKGDVLFTLGEAQGGPSIEKLVWYLLDRAVLMSTKRAA
Ga0306926_112782291	3300031954	Soil	MDNRFTDDEKGLLEHAFQLRESQTEEQRAIMRAEFEANWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGH
Ga0308176_101106252	3300031996	Soil	METRFTDDEKGLLEQALRLRESQTEEQRAIMRAEFEVNWPALVAYLKQSEARGEKMSGDVLFALGEGQSGPSIEKIVWYMLDRAVLMSSKSGP
Ga0306922_117980311	3300032001	Soil	MEARFTDDEKGLLEHAFQLRESQTEEQRAIMRAEFEANWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGP
Ga0318533_111986401	3300032059	Soil	MGTRFTDDEKGLLEHAFQLRESQTEEQRAIMRAEFEANWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGH
Ga0306924_101548422	3300032076	Soil	MDNRFTDDEKGLLEQAFHLRESQTEEERATMRAEFEVNWPALVAYIKQSEARGEKMRGDVLFALGEGQGGPSIEKIVWYMLDRAVLMSTKSGH
Ga0335085_1000186548	3300032770	Soil	MERRFTDDEKGLLEQAFQLRESQTEEQRATMRAEFEGNWPALVAYIKQSEARGEKMRGDVLFELGEGQGGPSIERIVWYMLDRAVLMSTKSGP
Ga0335079_110064141	3300032783	Soil	METRFTDDEKGLLEHAFQLREGQSEEQRAIMRAEFEVKWPALVAYIKQSEARGEKMSGDVLFALGEGQGGPTIEKVVWYMLDRAVLGRTKSHT
Ga0310810_103729082	3300033412	Soil	MFTDDEKFLLEHAFQVRESQTEEERAKMRAEFERNWPALVAYIKEAEAQSKNMKGDVLFTLGETQGGPSIEKIVWYLLDRAVLMSTKRAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090792

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences