NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090886

Metagenome Family F090886

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090886
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 43 residues
Representative Sequence MIKQTQIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGIY
Number of Associated Samples 74
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 54.29 %
% of genes near scaffold ends (potentially truncated) 94.44 %
% of genes from short scaffolds (< 2000 bps) 77.78 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (82.407 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(35.185 % of family members)
Environment Ontology (ENVO) Unclassified
(93.519 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.519 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.88%    β-sheet: 0.00%    Coil/Unstructured: 65.12%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF13443HTH_26 13.89
PF01381HTH_3 2.78


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.41 %
All OrganismsrootAll Organisms17.59 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001355|JGI20158J14315_10140214Not Available755Open in IMG/M
3300001450|JGI24006J15134_10034206Not Available2199Open in IMG/M
3300001450|JGI24006J15134_10043563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter giovannonii1883Open in IMG/M
3300001450|JGI24006J15134_10143796Not Available791Open in IMG/M
3300001460|JGI24003J15210_10120405Not Available717Open in IMG/M
3300005933|Ga0075118_10180120Not Available694Open in IMG/M
3300006025|Ga0075474_10107963Not Available895Open in IMG/M
3300006027|Ga0075462_10177831Not Available645Open in IMG/M
3300006027|Ga0075462_10191536Not Available617Open in IMG/M
3300006164|Ga0075441_10049176All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P1676Open in IMG/M
3300006164|Ga0075441_10320871All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P564Open in IMG/M
3300006190|Ga0075446_10161453Not Available635Open in IMG/M
3300006193|Ga0075445_10336716Not Available506Open in IMG/M
3300006802|Ga0070749_10240162Not Available1029Open in IMG/M
3300006810|Ga0070754_10103362Not Available1405Open in IMG/M
3300006810|Ga0070754_10396741All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P604Open in IMG/M
3300006810|Ga0070754_10514825Not Available514Open in IMG/M
3300006874|Ga0075475_10407844Not Available545Open in IMG/M
3300006916|Ga0070750_10038422Not Available2358Open in IMG/M
3300006916|Ga0070750_10058805Not Available1844Open in IMG/M
3300006919|Ga0070746_10046536All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P2275Open in IMG/M
3300006919|Ga0070746_10047882Not Available2238Open in IMG/M
3300006919|Ga0070746_10150804Not Available1132Open in IMG/M
3300006921|Ga0098060_1094443Not Available850Open in IMG/M
3300006921|Ga0098060_1162906All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P616Open in IMG/M
3300006947|Ga0075444_10076279All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter giovannonii1513Open in IMG/M
3300006947|Ga0075444_10169819Not Available901Open in IMG/M
3300006947|Ga0075444_10235711Not Available725Open in IMG/M
3300007344|Ga0070745_1112854Not Available1053Open in IMG/M
3300007344|Ga0070745_1184914Not Available776Open in IMG/M
3300007345|Ga0070752_1040238Not Available2209Open in IMG/M
3300007345|Ga0070752_1210795Not Available770Open in IMG/M
3300007345|Ga0070752_1252482Not Available685Open in IMG/M
3300007346|Ga0070753_1026727Not Available2504Open in IMG/M
3300007538|Ga0099851_1066299Not Available1403Open in IMG/M
3300007539|Ga0099849_1033505Not Available2189Open in IMG/M
3300007539|Ga0099849_1193750Not Available767Open in IMG/M
3300007640|Ga0070751_1064524Not Available1570Open in IMG/M
3300007960|Ga0099850_1064872All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P1538Open in IMG/M
3300008012|Ga0075480_10052693Not Available2382Open in IMG/M
3300008012|Ga0075480_10055923Not Available2298Open in IMG/M
3300008012|Ga0075480_10422413Not Available653Open in IMG/M
3300008012|Ga0075480_10446677Not Available630Open in IMG/M
3300008012|Ga0075480_10612315Not Available514Open in IMG/M
3300008221|Ga0114916_1055051Not Available1092Open in IMG/M
3300009409|Ga0114993_10691616Not Available743Open in IMG/M
3300009420|Ga0114994_10973195Not Available549Open in IMG/M
3300009425|Ga0114997_10057066All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter giovannonii2487Open in IMG/M
3300010153|Ga0098059_1221387Not Available734Open in IMG/M
3300010300|Ga0129351_1238266Not Available698Open in IMG/M
3300010318|Ga0136656_1054731All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P1432Open in IMG/M
3300010883|Ga0133547_10562498All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter giovannonii2289Open in IMG/M
3300017697|Ga0180120_10271106Not Available685Open in IMG/M
3300017697|Ga0180120_10370461Not Available565Open in IMG/M
3300017710|Ga0181403_1006967Not Available2457Open in IMG/M
3300017713|Ga0181391_1010800Not Available2352Open in IMG/M
3300017713|Ga0181391_1120989Not Available587Open in IMG/M
3300017717|Ga0181404_1146561Not Available570Open in IMG/M
3300017720|Ga0181383_1054071Not Available1078Open in IMG/M
3300017728|Ga0181419_1048589Not Available1113Open in IMG/M
3300017732|Ga0181415_1008797Not Available2420Open in IMG/M
3300017732|Ga0181415_1060146Not Available861Open in IMG/M
3300017735|Ga0181431_1025527Not Available1367Open in IMG/M
3300017735|Ga0181431_1118472Not Available591Open in IMG/M
3300017737|Ga0187218_1035431Not Available1270Open in IMG/M
3300017741|Ga0181421_1155473Not Available591Open in IMG/M
3300017743|Ga0181402_1010610Not Available2781Open in IMG/M
3300017744|Ga0181397_1017247Not Available2152Open in IMG/M
3300017749|Ga0181392_1013712Not Available2626Open in IMG/M
3300017749|Ga0181392_1044089Not Available1379Open in IMG/M
3300017752|Ga0181400_1063605Not Available1122Open in IMG/M
3300021958|Ga0222718_10486733Not Available599Open in IMG/M
3300021959|Ga0222716_10023821Not Available4521Open in IMG/M
3300022057|Ga0212025_1030106Not Available912Open in IMG/M
3300022167|Ga0212020_1044537Not Available753Open in IMG/M
3300022176|Ga0212031_1023988Not Available963Open in IMG/M
3300023245|Ga0222655_1029533Not Available919Open in IMG/M
3300025120|Ga0209535_1075457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter giovannonii1302Open in IMG/M
3300025120|Ga0209535_1213431All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P527Open in IMG/M
3300025137|Ga0209336_10122491Not Available712Open in IMG/M
3300025138|Ga0209634_1045696Not Available2196Open in IMG/M
3300025138|Ga0209634_1094627All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter giovannonii1337Open in IMG/M
3300025138|Ga0209634_1188545Not Available801Open in IMG/M
3300025168|Ga0209337_1116389Not Available1214Open in IMG/M
3300025168|Ga0209337_1182731Not Available872Open in IMG/M
3300025168|Ga0209337_1263793Not Available650Open in IMG/M
3300025266|Ga0208032_1069099Not Available761Open in IMG/M
3300025276|Ga0208814_1115729Not Available650Open in IMG/M
3300025603|Ga0208414_1136379All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P621Open in IMG/M
3300025603|Ga0208414_1136577All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales620Open in IMG/M
3300025759|Ga0208899_1055236All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC028P1676Open in IMG/M
3300025769|Ga0208767_1099112Not Available1172Open in IMG/M
3300025815|Ga0208785_1092758Not Available757Open in IMG/M
3300025818|Ga0208542_1107572Not Available795Open in IMG/M
3300025840|Ga0208917_1293970Not Available506Open in IMG/M
3300025889|Ga0208644_1403519Not Available502Open in IMG/M
3300027522|Ga0209384_1043108All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter giovannonii1255Open in IMG/M
3300027522|Ga0209384_1079476Not Available816Open in IMG/M
3300027672|Ga0209383_1068293All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter giovannonii1268Open in IMG/M
3300027704|Ga0209816_1139886Not Available880Open in IMG/M
3300027844|Ga0209501_10739395Not Available525Open in IMG/M
3300031621|Ga0302114_10310414Not Available616Open in IMG/M
3300031705|Ga0308003_1226676Not Available556Open in IMG/M
3300031851|Ga0315320_10088518Not Available2376Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous35.19%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine21.30%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater15.74%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine12.04%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean3.70%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.70%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake2.78%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.85%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.93%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.93%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300005933Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKEEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017735Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21EnvironmentalOpen in IMG/M
3300017737Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300023245Saline water microbial communities from Ace Lake, Antarctica - #423EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025266Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025603Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027704Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300031705Marine microbial communities from water near the shore, Antarctic Ocean - #36EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20158J14315_1014021413300001355Pelagic MarineMIKQTQIIDPLETLQQDGFQKLNELLQINHHSPTSSSMPLGIYAFRYLFS
JGI24006J15134_1003420643300001450MarineMILKTNKIVDPLETLQQDGFQKLNELLKINHHSPTSSSMP
JGI24006J15134_1004356313300001450MarineMILKTKLTDPLQELQLDGFKKLNELLKINHHSPTSSSMPEGIYAF
JGI24006J15134_1014379633300001450MarineMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGIYAF
JGI24003J15210_1012040533300001460MarineMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGI
Ga0075118_1018012033300005933Saline LakeMIKQTKIIDPLETLQQDGFKKLNELLNINHHSPTSSSMPLGIYVARYL
Ga0075474_1010796333300006025AqueousMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAFRY
Ga0075462_1017783113300006027AqueousMLIRNKKIIDPLETLQQDGFTKLNELLKINHHSPTS
Ga0075462_1019153613300006027AqueousMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPT
Ga0075441_1004917633300006164MarineMIKQTQIIDPLETLQQDGFKKLNELLKINHHSPTSSSMP
Ga0075441_1008822913300006164MarineMIKQTQIIDPLKELLLSGNENLTSFEKLNELLKINHHSPT
Ga0075441_1032087133300006164MarineMIKQTQIIDPLDGLQQDGFKKLNELLKVNHHSPTSSSMP
Ga0075446_1002156013300006190MarineMIKQTQIIDPLKELLLSGNENLTSFEKLNELLKINHHS
Ga0075446_1016145333300006190MarineMIKQTQIIDPLQELRLDGFQKLNELLKVNHHSPTSSSMPLGIYAFRY
Ga0075445_1033671613300006193MarineMIKQTQIIDPLQELRLDGFQKLNELLKVNHHSPTSSSMPLGIYAF
Ga0070749_1024016213300006802AqueousMILKTKITDPLQELELDGFKKLNELLKINHHSPTSSSMPLGVYAFR
Ga0070754_1010336213300006810AqueousMIIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTS
Ga0070754_1039674133300006810AqueousMIKQTQIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGIYAFRYL
Ga0070754_1051482513300006810AqueousMILKTKITDPLQELQLDGFKKLNELLKINHHSPTSSSMPLG
Ga0075475_1040784413300006874AqueousMLIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPL
Ga0070750_1003842243300006916AqueousMLIRNKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPL
Ga0070750_1005880533300006916AqueousMILKTKLIDPLEELKLDGFQKLNELLKINHHSPTS
Ga0070746_1004653613300006919AqueousMLIRNKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSM
Ga0070746_1004788233300006919AqueousMILKTKLIDPLEELKLDGFQKLNELLKINHHSPTSSSM
Ga0070746_1015080413300006919AqueousMLIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGV
Ga0098060_109444313300006921MarineMILKNKITDPLQDLQLDSFTKLNNLLKINHHSPSAAQLPLGFYVFSRLF
Ga0098060_116290613300006921MarineMILKTKLTDPLQELQLDGFKKLNELLKINHHSPTSSS
Ga0075444_1007627933300006947MarineMIKQTQIIDPLDGLQQDGFKKLNELLKVNHHSPTSSSMALRI*
Ga0075444_1016981913300006947MarineMIKQTQIIDPLETLQQDGFKKLNELLKINHHSPTSSSMPLGIYA
Ga0075444_1023571133300006947MarineMIKQTQIIDPLDGLQQDGFKKLNELLKVNHHSPTSSSMPLGIYAFRYLFSTQE
Ga0070745_111285433300007344AqueousMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAFRYL
Ga0070745_118491433300007344AqueousMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSS
Ga0070752_104023813300007345AqueousMILKTKLIDPLEELKLDGFQKLNELLKINHHSPTSSSMPEG
Ga0070752_121079533300007345AqueousMLIKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAFRYLFSTQ
Ga0070752_125248213300007345AqueousMLIRNKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGV
Ga0070753_102672713300007346AqueousMLIKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAFRY
Ga0099851_106629913300007538AqueousMLIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYA
Ga0099849_103350513300007539AqueousMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGV
Ga0099849_119375013300007539AqueousMIIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYA
Ga0070751_106452413300007640AqueousMLIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAF
Ga0099850_106487213300007960AqueousMLIRNKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMP
Ga0075480_1005269343300008012AqueousMLIRNKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAFRYL
Ga0075480_1005592343300008012AqueousMLIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAFRYL
Ga0075480_1042241333300008012AqueousMILKTKLIDPLEELKLDGFQKLNELLKINHHSPTSSSMP
Ga0075480_1044667723300008012AqueousMILKQTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVY
Ga0075480_1061231523300008012AqueousMILKTKIIDPLQELQLDGFKKLNELLKINHHSPTSSSMPLGVYAF
Ga0114916_105505133300008221Deep OceanMIKQTQIIDPLDGLQQDGFKKLNELLKVNHHSPTSSSMPLGIYAFR
Ga0114993_1069161633300009409MarineMIIKQTKIIDPLETLQQDGFKKLNELLKINHHSPTSS
Ga0114994_1097319513300009420MarineMILKNKIQDPLEDLRLDSFTKLNELLKINHHSPSASGLPLGFYVYSRLFCTQA
Ga0114997_1005706643300009425MarineMIKQTQIIDPLETLQQDGFKKLNELLQINHHSPTSSS
Ga0114915_114118113300009428Deep OceanMIKQTQIIDPLKELLLSGNENLTSFEKLNELLKINHHSP
Ga0098059_122138713300010153MarineMILKTNKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGVYA
Ga0129351_123826623300010300Freshwater To Marine Saline GradientMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAF
Ga0136656_105473113300010318Freshwater To Marine Saline GradientMLIRNKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYA
Ga0133547_1056249843300010883MarineMIKQTQIIDPLETLQQDGFKKLNELLKINHHSPTSSSMPL
Ga0180120_1027110633300017697Freshwater To Marine Saline GradientMILKTKLIDPLEELKLDGFQKLNELLKINHHSPTSSSMPE
Ga0180120_1037046123300017697Freshwater To Marine Saline GradientMILKTKLIDPLEELKLDGFQKLNELLKINHHSPTSSSMPEGIYA
Ga0181403_100696743300017710SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTS
Ga0181391_101080043300017713SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGIYAFRYLFS
Ga0181391_112098933300017713SeawaterMILKTNKIIDPLETLQQDGFQKLNELLKINHHSPTSSSMPEGIY
Ga0181404_114656113300017717SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGIYAFRYLF
Ga0181383_105407133300017720SeawaterMILKTKLIDPLQELQLDSFQKLNELLKINHHSPTSSSM
Ga0181419_104858933300017728SeawaterMILKTKLIDPLEELKLNGFQKLNDLLKINHNSPLSSSIPL
Ga0181415_100879733300017732SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGIYAFRY
Ga0181415_106014633300017732SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGVY
Ga0181431_102552733300017735SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGIYAFR
Ga0181431_111847223300017735SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPT
Ga0187218_103543113300017737SeawaterMILKTNKIIDPLETLQQDGFQKLNELLKINHHSPTSSSMPEGIYAFRY
Ga0181421_115547313300017741SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGIYA
Ga0181402_101061043300017743SeawaterMILKTKLIDPLEELKLDGFQKLNELLKINHHSPTSSSMPEGIY
Ga0181397_101724713300017744SeawaterMILKTNKIIDPLETLQQDGFQKLNELLKINHHSPTSSSMPEGIYAFRYLF
Ga0181392_101371243300017749SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSSMPEGIYAFRYLFFQKL
Ga0181392_104408913300017749SeawaterMILKTKLIDPLQELQLDGFQKLNELLNINHHSPTSS
Ga0181400_106360533300017752SeawaterMILKTKLIDPLEELKLDGFQKLNELLKINHHSPTSSSMPEGIYAF
Ga0222718_1048673313300021958Estuarine WaterMNIKLNKIIDPLETLQQDGFTKLNELLKINHHSPTSSSM
Ga0222716_1002382113300021959Estuarine WaterMLIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSS
Ga0212025_103010633300022057AqueousMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPL
Ga0212020_104453713300022167AqueousMLIRNKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLG
Ga0212031_102398813300022176AqueousMIIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAFRYLF
Ga0222655_102953313300023245Saline WaterMIKQTKIIDPLKELLLSGNENLTSFEKLNELLKINHHSPTSSSMPLGI
Ga0208790_121189313300025118MarineMIIQNKITDPLKELLLSGNENLTSFQKLNSLLKINHHSPTSASMP
Ga0209535_107545713300025120MarineMIKQTQIIDPLETLQQDGFEKLNELLKINHHSPTSSSMPEGIY
Ga0209535_121343123300025120MarineMIKQTQIIDPLETLQQDGFQKLNELLKINHHSPTSSSMPL
Ga0209336_1012249113300025137MarineMILKTNKIIDPLETLQQDGFQKLNELLQVNHHSPTSSSMPEGIY
Ga0209634_104569643300025138MarineMILKTKLTDPLQELQLDGFKKLNELLKINHHSPTSSSMPEGI
Ga0209634_109462733300025138MarineMILKTKLTDPLQELQLDGFKKLNELLKINHHSPTS
Ga0209634_118854513300025138MarineMIKQTQIIDPLETLQQDGFQKLNELLKINHHSPTSSSMP
Ga0209337_111638913300025168MarineMIKQTQIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPL
Ga0209337_118273133300025168MarineMILKTNKIVDPLETLQQDGFQKLNELLKINHHSPTSSSMPEG
Ga0209337_126379313300025168MarineMIKQTQIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGIY
Ga0208032_106909913300025266Deep OceanMIKQTQIIDPLDGLQQDGFKKLNELLKVNHHSPTSSSMPLGIYAFRY
Ga0208814_111572933300025276Deep OceanMIKQTKIIDPLDGLQQDGFKKLNELLKVNHHSPTSSSMPLGIYAF
Ga0208414_113637913300025603Saline LakeMITKIQNEVKNLVKQNKIIDPLETLQQDGFQKLNDLLKINHHSPTSSSMPLGIYVARYLLSTQ
Ga0208414_113657713300025603Saline LakeMIKQTKIIDPLKELLLSGNENLTSFEKLNELLKINHHSPTSSSMPLGIY
Ga0208899_105523633300025759AqueousMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLG
Ga0208767_109911233300025769AqueousMLIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMP
Ga0208785_109275813300025815AqueousMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVY
Ga0208542_110757233300025818AqueousMLIRNKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAFRY
Ga0208917_129397023300025840AqueousMLIRNTKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYAFR
Ga0208644_140351913300025889AqueousMILKQKKIIDPLETLQQDGFTKLNELLKINHHSPTSSSMPLGVYT
Ga0209384_104310813300027522MarineMIKQTQIIDPLDGLQQDGFKKLNELLKVNHHSPTSSSMPLG
Ga0209384_107947633300027522MarineMIIKNKVSDPLEDLRLDSFTKLNELLKINHHSPSASGLPLGF
Ga0209383_106829333300027672MarineMIKQTQIIDPLDGLQQDGFKKLNELLKVNHHSPTSS
Ga0209816_113988633300027704MarineMIKQTQIIDPLDGLQQDGFKKLNELLKVNHHSPTSSSMPLGIYAF
Ga0209501_1073939513300027844MarineMIIKQTKIIDPLETLQQDGFKKLNELLKINHHSPTSSSMPL
Ga0302114_1031041413300031621MarineMIKQTKIIDPLKELLLSGNESLTSFEKLNELLKINHHSPTSSSMPLGIYAFRYLFTTQEE
Ga0308003_122667613300031705MarineMIKQTQIIDPLKELLLSGNENLTSFEKLNELLKINHHSPTSSSMPLGIYAFRYLLSTQEQ
Ga0315320_1008851843300031851SeawaterMILKTNKLIDPLETLQQDGFTKLNELLKINHHSPTSSS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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