NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F090912

Metagenome / Metatranscriptome Family F090912

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090912
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 94 residues
Representative Sequence MARLSVLAITAVAVIAIPKAQAVDTANNAAETEVVTVTGEATGSLTSLSPEESAKQKTQVPGAFTVKTTDDMELGRASNFEDLLQR
Number of Associated Samples 93
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 65.74 %
% of genes near scaffold ends (potentially truncated) 89.81 %
% of genes from short scaffolds (< 2000 bps) 92.59 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.741 % of family members)
Environment Ontology (ENVO) Unclassified
(28.704 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 21.93%    β-sheet: 0.00%    Coil/Unstructured: 78.07%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.17
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF00583Acetyltransf_1 70.37
PF01583APS_kinase 7.41
PF13673Acetyltransf_10 1.85
PF14306PUA_2 1.85
PF03143GTP_EFTU_D3 1.85
PF02562PhoH 0.93
PF04205FMN_bind 0.93
PF01050MannoseP_isomer 0.93
PF13508Acetyltransf_7 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0529Adenylylsulfate kinase or related kinaseInorganic ion transport and metabolism [P] 7.41
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 0.93
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459004|F62QY1Z01BBH2SAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia527Open in IMG/M
2170459006|GBPF9FW02HGKJJAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia527Open in IMG/M
2170459006|GBPF9FW02JG0VWAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia525Open in IMG/M
2170459009|GA8DASG01EGNF6All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium545Open in IMG/M
2189573004|GZGWRS401EK2XLAll Organisms → cellular organisms → Bacteria517Open in IMG/M
2209111022|2221200857All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium863Open in IMG/M
3300004479|Ga0062595_100978514All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300004633|Ga0066395_10736069All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005167|Ga0066672_10293211All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300005174|Ga0066680_10017327All Organisms → cellular organisms → Bacteria → Proteobacteria3868Open in IMG/M
3300005175|Ga0066673_10568553All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300005178|Ga0066688_10132389All Organisms → cellular organisms → Bacteria1550Open in IMG/M
3300005178|Ga0066688_10731921All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300005180|Ga0066685_10229835All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300005290|Ga0065712_10034554All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300005332|Ga0066388_103239085All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300005339|Ga0070660_100824624All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300005439|Ga0070711_100700139All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium853Open in IMG/M
3300005526|Ga0073909_10641160All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium528Open in IMG/M
3300005548|Ga0070665_100862348All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300005561|Ga0066699_10073211All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2186Open in IMG/M
3300005598|Ga0066706_11442092All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia519Open in IMG/M
3300005764|Ga0066903_100158237All Organisms → cellular organisms → Bacteria3276Open in IMG/M
3300005764|Ga0066903_102549014All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300005764|Ga0066903_105254654All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia685Open in IMG/M
3300005764|Ga0066903_107006768All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300006028|Ga0070717_11588328All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300006031|Ga0066651_10096241All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300006031|Ga0066651_10776961All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300006163|Ga0070715_10648160All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300006800|Ga0066660_10642225All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300006904|Ga0075424_102265485All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300010043|Ga0126380_11165086All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300010048|Ga0126373_11560009All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300010303|Ga0134082_10090087All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300010325|Ga0134064_10056293All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300010359|Ga0126376_11476176All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia708Open in IMG/M
3300010359|Ga0126376_12723739All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium544Open in IMG/M
3300010360|Ga0126372_11355637All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium742Open in IMG/M
3300010366|Ga0126379_13215538All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300010366|Ga0126379_13825955All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia504Open in IMG/M
3300010373|Ga0134128_12587698All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium559Open in IMG/M
3300010376|Ga0126381_101890246All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia861Open in IMG/M
3300010397|Ga0134124_11311073All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300011444|Ga0137463_1347515All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium533Open in IMG/M
3300012019|Ga0120139_1216970All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium509Open in IMG/M
3300012200|Ga0137382_10083904All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2071Open in IMG/M
3300012205|Ga0137362_10341815All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1296Open in IMG/M
3300012211|Ga0137377_10229849All Organisms → cellular organisms → Bacteria1782Open in IMG/M
3300012582|Ga0137358_10692804All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300012917|Ga0137395_10155909All Organisms → cellular organisms → Bacteria1566Open in IMG/M
3300012929|Ga0137404_10059733All Organisms → cellular organisms → Bacteria2953Open in IMG/M
3300012930|Ga0137407_11974948All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300012951|Ga0164300_10344155All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium798Open in IMG/M
3300012955|Ga0164298_10294577All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300012957|Ga0164303_11346050All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia531Open in IMG/M
3300012960|Ga0164301_11298208All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium590Open in IMG/M
3300012971|Ga0126369_12674485All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300012971|Ga0126369_12904534All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia561Open in IMG/M
3300013102|Ga0157371_11603141All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia509Open in IMG/M
3300013296|Ga0157374_11177102All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium788Open in IMG/M
3300013297|Ga0157378_11496190All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium720Open in IMG/M
3300013307|Ga0157372_13221167All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia520Open in IMG/M
3300014745|Ga0157377_10431514All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300015374|Ga0132255_100220674All Organisms → cellular organisms → Bacteria2693Open in IMG/M
3300015374|Ga0132255_101732608All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium948Open in IMG/M
3300016341|Ga0182035_11340699All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium641Open in IMG/M
3300016341|Ga0182035_11850004All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium547Open in IMG/M
3300018468|Ga0066662_10118512All Organisms → cellular organisms → Bacteria1925Open in IMG/M
3300019879|Ga0193723_1195598All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia508Open in IMG/M
3300019881|Ga0193707_1000303All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus15989Open in IMG/M
3300019881|Ga0193707_1035903All Organisms → cellular organisms → Bacteria1612Open in IMG/M
3300019887|Ga0193729_1057752All Organisms → cellular organisms → Bacteria1559Open in IMG/M
3300020004|Ga0193755_1074295All Organisms → cellular organisms → Bacteria → Acidobacteria1095Open in IMG/M
3300020005|Ga0193697_1095528All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium713Open in IMG/M
3300020008|Ga0193757_1005749All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300021344|Ga0193719_10018157All Organisms → cellular organisms → Bacteria2986Open in IMG/M
3300021411|Ga0193709_1036472All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300021413|Ga0193750_1049281All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300021418|Ga0193695_1053172All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300021478|Ga0210402_10479456All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1155Open in IMG/M
3300022694|Ga0222623_10159126All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia879Open in IMG/M
3300022756|Ga0222622_10834184All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300025315|Ga0207697_10050931All Organisms → cellular organisms → Bacteria1710Open in IMG/M
3300025315|Ga0207697_10121945All Organisms → cellular organisms → Bacteria → Proteobacteria1122Open in IMG/M
3300025919|Ga0207657_10665645All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300025921|Ga0207652_10708607All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium898Open in IMG/M
3300025960|Ga0207651_11774884All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium555Open in IMG/M
3300026023|Ga0207677_11171770All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium703Open in IMG/M
3300026329|Ga0209375_1179635All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium840Open in IMG/M
3300026340|Ga0257162_1040520All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium583Open in IMG/M
3300026557|Ga0179587_11035417All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia540Open in IMG/M
3300027655|Ga0209388_1143112All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia677Open in IMG/M
3300028379|Ga0268266_12267920All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia514Open in IMG/M
3300028811|Ga0307292_10415266All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300028884|Ga0307308_10278466All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia802Open in IMG/M
3300030844|Ga0075377_11779056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales1174Open in IMG/M
3300031122|Ga0170822_15304412All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia500Open in IMG/M
3300031231|Ga0170824_125952245All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia647Open in IMG/M
3300031446|Ga0170820_14478739All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium597Open in IMG/M
3300031446|Ga0170820_17583468All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium591Open in IMG/M
3300031744|Ga0306918_11337171All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300031754|Ga0307475_10565738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales911Open in IMG/M
3300031890|Ga0306925_10518986All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300032074|Ga0308173_11682043All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300032180|Ga0307471_101118764All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia953Open in IMG/M
3300032180|Ga0307471_103611878All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium547Open in IMG/M
3300033289|Ga0310914_10339510All Organisms → cellular organisms → Bacteria1358Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.19%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.26%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.33%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil5.56%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.70%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.70%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.78%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.85%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil1.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.85%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.85%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.93%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.93%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.93%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.93%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459004Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)EnvironmentalOpen in IMG/M
2170459006Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cmEnvironmentalOpen in IMG/M
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
2189573004Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)EnvironmentalOpen in IMG/M
2209111022Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichmentEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300020008Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021411Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2EnvironmentalOpen in IMG/M
3300021413Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026340Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-AEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030844Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4B_082765202170459004Grass SoilVAICEATSGEQLIWNSMWRRWSLLATTAVSVIGIQTAQAAESSNNSAESAEVTVTGEAIGSLTSGSPEESAKQKTQVPGAFTVRTTDDMELGRASNFEDLLQR
L01_033597702170459006Grass SoilMWRRWSLLATTAVLGIQTAHAAETSNNSAETAEVTVTGEAIGTLTSGSPEESAKQKTQVPGAFTVRTTDDMELGRASNFEDLLQRTPGVFFNRKTAPKFPRFQF
L01_065044002170459006Grass SoilVAICEATSGEQLIWNSMWRRWSLLATTAVSVIGIQTAQAAESSNNSAESAEVTVTGEAIGSLTSGSPEESAKQKTQVPGAFTIRTTDDMELGRASNFEDLLQR
F47_037117302170459009Grass SoilMWRRWSLLATTAVSVIGIQTAQAAESSNNSAESAEVTVTGEAIGSLTSGSPEESAKQKTQVPGAFTVRTTDDMELGRASNFEDLLQRTPGVFLQSENGAEV
FG2_056264202189573004Grass SoilMARLSVLAITAVAVIAIPEAQAVDTSNNAVQTEEVTVTGEATGSLTSLSPEESAKQKTQVPGAFTVKTTDDMELGRASNFEDLLQRTPGVFLNRK
22220278382209111022Grass SoilMAVCEATFGARLIGLDMARLSVLAITAVAVIAIPEAQAVDTSSNAAEAEGVTVTGEATGSLTSGRPRNLQSRRHKFRGAFAVKSADDMEFGRASNFQDLLQRTRAFSFN
Ga0062595_10097851413300004479SoilMWRRWTILAATAVSVIGIEIAQAADTSNNPAETEEVTVTGEAIGSLTSVSPEESAKQKTAVPGAFTVKTTDDMELGRASNFE
Ga0066395_1073606923300004633Tropical Forest SoilMCRSWSVLAITAVVVVAIQEAQAIDTSNNAAEAEGVTVTGEATGSLTSVSPEESAEQKTEVPGAFTVKTNDDMELGRASNFEDLLQRTPGVFLQSENGMEVS
Ga0066672_1029321133300005167SoilMWRRWSVLAITTVSVIGIQTAQGAEASNDSAETAEVTVIGEATGSLTSVSPEESAKQKTQVPGAFTVKTTDDMKLGRASNFED
Ga0066680_1001732733300005174SoilMWRRWSVLAITTVSVIGIQTAQGAEASNDSAETAEVTVIGEATGSLTSVSPEESAKQKTQVPGAFTVKTTDDMKLGRASNFEDFAATNPQRFPSVGKRR*
Ga0066673_1056855313300005175SoilVAVCEATFGARLIVLHMARLSVVAITAVAVIAIPEAQAVDTASNAAETEEVTVTGEATGSLTSLSPEESAKQKSQVPGAFTVKTTDDMELGCASNFEDLLQRTPGVFLQSENGVE
Ga0066688_1013238933300005178SoilVAVYEATFDVRLIRLDVARLSLLAITAVAVIAIPGAHAVDTSIDPTETERVTVTGEATGSLTSASPEKSAEQKRQVSGAFTVKTTDD
Ga0066688_1073192123300005178SoilMWRHWSVLASTAVSVIGFQTAHAAETSNNPAETEEVTVTGEATGSLTSASPDESAKRKAQVPGGFTIKTADEMKRGRAS
Ga0066685_1022983523300005180SoilMARLSVLAITAVAVIAIPEAQAVDTSSNAAETEEATVRGEATGSLTSLSPEESAKQKRQVPGAFTVKTTDDMELGRTSNFEDLLQRTPGVFLQPENGVEVAALSHAEVFRDADAFYGGVSWSW*
Ga0065712_1003455433300005290Miscanthus RhizosphereMAVCETTFGARLIGPDMARLCVLAVAAVAVIAIPKSQAVDTSSNAAETEAVTVTGEATEESLTSVSPEESAKQKTQIPGAFAVKTVDDMELGRASNFED
Ga0066388_10323908513300005332Tropical Forest SoilMARLSVLAITAVTAIAIPEVQAVDTSSNAAETEAVTVTGEATGSLTSVSPEESAMQKTQIPGAFTVKTNDDMELGRASNFED
Ga0070660_10082462423300005339Corn RhizosphereMAVCETTFGARLIGPDMARLCVLAVAAVAVIAIPKSQAVDTSSNAAETEAVTVTGEATEESLTSVSPEESAKQKTQIPGAFAVKTVDDMELGRASNF
Ga0070711_10070013913300005439Corn, Switchgrass And Miscanthus RhizosphereVAVFEATFGVRLIVLHMARLSVLAITAVAVIAIPKAQAVDTANNAAETEVVTVTGEATGSLTSLSPEESAKQKRQVPGAFTVKTTDDMELGRASNFED
Ga0073909_1064116023300005526Surface SoilMAVCEATFGARLIGLDMARLSVLAITAVAVIAIPEAQAVDTSSNAAEAEGVTVTGEATGSLTSVSPDESANQKTQVPGAFTVRTADDMELGRAS
Ga0070665_10086234813300005548Switchgrass RhizosphereMARLRLLAITAVAVIVIPGAQATDTSSNAAEIERVTVTGEATGSLTSVSPEESANQKRQVPGAFTVKTTDDMELGRASNFEDLL
Ga0066699_1007321123300005561SoilMWRRWSVLAITTVSVIGIQTAQGAEASNDSAETAEVTVIGEATGSLTSVSLEESAKQKTQVPGAFTVKTTDDMKLGRASNFEDFAATNPQRFPSVGKRR*
Ga0066706_1144209223300005598SoilARLIVLHMARLSVLAITAVAVIAIPEAQAVDTSSNAAETEEATVRGEATGSLTSLSPEEFAKQKRQVPGAFTVKTTDDMELGRTSNFEDLLQRTPGVFLQPENGVEVAALSHAEVFRDADAFYGGVSWSW*
Ga0066903_10015823733300005764Tropical Forest SoilMWRASSVLSIAAIALIAIQDARSAETSALPAEVEEVTVAGESTGSLTSASPEESVKQKTAIPGAFTIKTADDMDLGRASNFEDLLQRTPGVFLQSENGTEPASTAGTLQPQNGKRG*
Ga0066903_10254901433300005764Tropical Forest SoilMARLNALATIAFAIIAIPEAQAVDTSGNVAETEGVTVTGQAIGSLTSPSSEESVKQKTTVPGAFTVRTTDDMELGRA
Ga0066903_10525465423300005764Tropical Forest SoilMWRACTVFAITAVAVIAIPEVQAVGTSGNAAETEEVTVVGEATGSLTSVSPEEAAKQKTQIPGAFMLRTNEDMELGRASNFEDLLQRT
Ga0066903_10700676823300005764Tropical Forest SoilMIGLDMARLSVLAITAVAVIAMPHAQAAEASNSTVETEEVTVTGEAAGSLISVSPEEATKQKTEIPGAFTLKTNDDVELGRASNFE
Ga0070717_1158832813300006028Corn, Switchgrass And Miscanthus RhizosphereMWRRWSVLATTAVSVIGIQTAQAAETSNNPAETEEVTVTGEATGSLTSESPEKSAKQKTQVPGGFTIKTADEMTLGRASNFEDLLQRAPGVFLQSENGAE
Ga0066651_1009624133300006031SoilVAVYEATFDVRLIRLDVARLSLLAITAVAVIAIPGAHAVDTSIDPTETERVTVTGEATGSLTSASPEKSAEQKRQVSGAFTVKTTDDMELGRSSNFEDLL
Ga0066651_1077696113300006031SoilMWRCWSVLAITAVSGIGIQTAQAAETSNSPAETAEVTVTGEATGSLTSASPEESAKQKTHVPGGFTIKSADEMKLGRASNFEDLLQREPGVFLQSENGAEVSK
Ga0070715_1064816023300006163Corn, Switchgrass And Miscanthus RhizosphereMWRRWSLLATTAVSVIGIQTAQAAETSNNSAETAEVTVTGEAIGSLTSGSPEESANQKTQVPGAFTIKTSHEMELGRASNFEDLLQRTPGV
Ga0066660_1064222533300006800SoilMWRRWSVLAITTVSVIGIQTAQGAEASNDSAETAEVTVTGEATGSLTSVSPEESAKQKTQVPGAFTVKTTDDMKLGRASNFEDLLQRTPGVFL
Ga0075424_10226548523300006904Populus RhizosphereMWRGWSVLAITAVAVFAIQGAQAANTSNNSAETEPVTVTGEATGSLTSASPEESAEQKLQVPGAFTVKTTDDMELGRASNFEDLLQR
Ga0126380_1116508613300010043Tropical Forest SoilMVRLSVLAITAAAVIAIPEAQAVDTSSNAAETEGVTVTGEATGSITSVSPKEAVEQKRQVPGAFTVKTTDDMELGRASNFEDLLQRTAGV
Ga0126373_1156000913300010048Tropical Forest SoilMKIRIVLIAAISSCFMAGITIQTAQAANTSNSQAQAEEVIITGEAIGSLTSMSPEDSAGQKTQIPGAFTVKTNDDMELGRASNFEDLLQRTP
Ga0134082_1009008713300010303Grasslands SoilLIRLDVARLSLLAITAVAVIAIPGAHAVDTSIDPTETERVTVTGEATGSLTSASPEKSAEQKRQVSGAFTVKTTDDMELGRSSNFEDLLQRIPGIFLQSENGSEV
Ga0134064_1005629333300010325Grasslands SoilLIRLDVARLSLLAITAVAVIAIPGAHAVDTSIDPTETERVTVTGEATGSLTSASPEKSAEQKRQVSGAFTVKTTDDMELGRSSNFEDLLQRIPGIFLQSENGSEVS
Ga0126376_1147617623300010359Tropical Forest SoilMWRVWCVLFITAFLLTAVQQVQTAESSATAEAQGVTVTGQPTGSLTSVSPDESAEQKTEVPGAFTVKTSDDMELGRASNFEDLLQRTPGVFCNLKTAWKFPRFP
Ga0126376_1272373923300010359Tropical Forest SoilMWRAWNVVAITVFASITIQGAQPADNSASPVESEEVIVTGEGTGSLISVPPEEAARQKTEIPGAFTLKAHDDMDLGRASNFEDLLQRTPGVFLQSENGMEVSKISI
Ga0126372_1135563723300010360Tropical Forest SoilMIGLDMARLSVLAITAVAVIAIPEVQAVDTSGNATETEEVTVIGEATGSLISVSPEEAAKQKTQIPGAFTVKTNDDMELGRASNFEDLLQRTPGVFLQSENGM
Ga0126379_1321553823300010366Tropical Forest SoilLIGLDMARLSVLAITAVAVVAIPEAQAVDISGNAAETEEVTVIGEATGSLISVSPEGAAKQKTQIPGAFTVKTNDDMELGRA
Ga0126379_1382595513300010366Tropical Forest SoilMWRRSCVLSITAFALIVLEDVQTAETSGIAETQEVTVTGEASGSLTSVSLEESTKQKTQVPGAFTLKTNNDMELGRASNLEDLLQRTPGV
Ga0134128_1258769813300010373Terrestrial SoilMWRRWSLLATTAVSVIGIQTAQAAETSNNSTETAEVTVTGEAIGSLTSGSPEESAKQKTQVPGGFTIRTADEMKLGRASNFEDLLQRVAGV
Ga0126381_10189024613300010376Tropical Forest SoilMWRACTVFAITAVAVVAIPEVQAVGISGNAAETEEVTVVGEATGSLTSVSLEEAAKQKTQIPGAFMLRTNEDMELGRASNFEDLLQRTPGVFLQSENG
Ga0134124_1131107323300010397Terrestrial SoilMARLCVLAVAAVAVIAIPKSQAVDTSSNAAETEAVTVTGAATEESLTSVSPDESAKQKTQIPGAFAVKTVDDMELGRAS
Ga0137463_134751523300011444SoilMARLSVLAITAVAAIAIPEAQAVDTANNAVETEEVTVTGEETGSLTSLSPEESAKQKRQVPGAFTVKTTDDMELGRASNFE
Ga0120139_121697013300012019PermafrostMARLSVLAITAVAVIAIPEAQAVDTANNAAETEVVTVTGEATGSLTSLSPEESAKQKRQVLGAFTVKTTDDMEFGRAS
Ga0137382_1008390433300012200Vadose Zone SoilLIRLDVARLSLLAITAVAVISIPGAHAVDTSIDPTETERVTVTGEATGSLTSASPEKSAEQKRQVSGAFTVKTTDDMELGRSSNFEDLLQ*
Ga0137362_1034181523300012205Vadose Zone SoilMWRRWSVLAITAVSGIGIQTTQAAETSNSPAETAEVTVTGEATGSLTSASPEESAKQKTQVPGGFTIKSADAMKLGRASNFEDLLQRAPGVFLQSENGAEVSKISMLPRSVMPKFFAARMH*
Ga0137377_1022984933300012211Vadose Zone SoilLIRLDVARLSLLAITAVAVIAIPGAHAVDTSIDPTETERVTVTGEATGSLTSASPEKSAEQKRQVSGAFTVKTTDDMELGRSSNFEDLLQ*
Ga0137358_1069280423300012582Vadose Zone SoilMWRRWSVLAITTVSVIGIQTAQGAEASNDSVEAAEVTVTGEATGSLTSVSPEESAKQKTQVPGAFTVKTTDDMELGRASNFEDLLQRT
Ga0137395_1015590923300012917Vadose Zone SoilMARLSVLAIIAVAVIAIPEAHAVDTSNNTAETEEVTVTGEATGSLTSLSPEESAKQKRQVPGAITVKTTDDMELGRASIF*
Ga0137404_1005973343300012929Vadose Zone SoilMWRRWSVLAITTVSVIGIQTAQGAEASNDSAEAAEVTVTGEATGSLTSVSPEESAKQKTQVPGAFTVRTTDDKELGRASNFE
Ga0137407_1197494813300012930Vadose Zone SoilVIGLDLARLSVLAITVVAVVAIPEAQAVDTSSNAAETERVTVTRETAGSLTSGSPEESAKQKTQVPGAFAVKTTDDMELGRASNFED
Ga0164300_1034415513300012951SoilMWRGWSVLAITAVAVFAIQGAQAANTSNNSAETEPVTVTGEATGSLTSASPEESAEQKLQVPGAFTVKTTDDMELGRASNFEDLLQRTPGVFLQSENG
Ga0164298_1029457733300012955SoilMWRGWSVLAITAVAVFAIQGAQAANTSNNSAETEPVTVTGEATGSLTSASPEESAEQKLQVPGAFTVKTTDDMELGRASNFEDLLQRTPG
Ga0164303_1134605013300012957SoilMWRGWSVLAITAVAVFAIQGAQAANTSNNSAETEPVTVTGEATGSLTSASPEESAEQKLQVPGAFTVKTTDDMELGRASNFEDLLQRTPGVFLQSEN
Ga0164301_1129820813300012960SoilMARLSVLAITAVAVIAIPKAQAVDTANNAAETEVVTVTGEATESLTSVAPEEAAKQKRQVPGGFTVKTADDMELGRA
Ga0126369_1267448513300012971Tropical Forest SoilMPRLIILAIAAVAVIAIPTAQSTDTSSNAAEVQGVTVIGEPTELLISAPPEESAKQKTQIPGAFTLKTSDDMELGRASNLEDLLQRTPGV
Ga0126369_1290453423300012971Tropical Forest SoilMWRVLSVLASTSLTLIGIQGSQAANTVANPAETEEVTVTGEAPASLTSASPQHSEKEKTQVPGGFTIKTADDMKLGRASNFEDLLQRAPGVFPQSENGMEVSKIS
Ga0157371_1160314123300013102Corn RhizosphereMARLCVLAVAAVAVIAIPKSQAVDTSSNTAETEAVTVTGEATEESLTSVSPEESAKQKTQIPGAFAVKTVDDMELGRASNFEDLLQRTAGVFLPSE
Ga0157374_1117710213300013296Miscanthus RhizosphereLIGLDMARLSVLAITAVAVIAISAAQAVDTSSNTAEAEGVTVTGEATGSLTSVSPDESAKQKTQVPGAFTVRTADDMELGRASNFEDLPQRTPGVFLQSENGAEV*
Ga0157378_1149619013300013297Miscanthus RhizosphereMNWNVANLARSFVTAVAVVGIQNTRSAEISSTPAEAEEVTVVGEATGSLTSVSPEESTKQKTQVPGAFTIKTADEMKLGRASNFEDLLQRTP
Ga0157372_1322116723300013307Corn RhizosphereMARLSVLAVAAVAVIAIPKSQAVDTSSNAAETEAVTVTGEATEESLTSVSPEESAKQKTQIPGAFAVKTVDDMELGRASNFEDLLQGTAGVFLPSENGSEVS
Ga0157377_1043151413300014745Miscanthus RhizosphereMARLSVLAVAAVAVIAIPKSQAVDTSSNAAETEAVTVTGAATEESLTSVSPDESAKQKTQIPGAFAVKTVDDMELGRASNFEDLLQR
Ga0132255_10022067413300015374Arabidopsis RhizosphereMARLRLLAITAVAVVVIPGAQAADTSSNAAEIERVTVTGEATGSLTSVSPEESANQKRQVPGAFTVKTTDDMELGRASNFEDLLRRTPGVFLQSGNGVEVSKIS
Ga0132255_10173260833300015374Arabidopsis RhizosphereMARLSVLAITAVAVIAIPKAQAVDTANNAAETEVVTVTGEATGSLTSLSPEESAKKKTQVPGAFTVKTTNDMELGRASNFEDLLQRTPGVFLQSENGV
Ga0182035_1134069913300016341SoilMIGLDMARLSVLAITAVAVIAMPHAQAADASNNTAEIEAVTVTGEATVSITSVSPEEAVEQNRRVPGAFTVKTTDDM
Ga0182035_1185000423300016341SoilMARLSVLAITAVTAIAIPKAQAVDTSGNAAETEAVTVTGEATGSLTSVSPEESAEQKTAVPGAFTVKTADDMDLGRASNFEDLLQRT
Ga0066662_1011851233300018468Grasslands SoilMWRRWSVLAITTVSVIGIQTAQGAEASNDSAETAEVTVIGEATGSLTSVSPEESAKQKTQVPGAFTVKTTDDMKLGRASNFEDFAATNPQRFPSVGKRR
Ga0193723_119559823300019879SoilMWRGWSVPAITTVAVIAIQEAQAANTSNNSAETEAVTVMGEATGSLTSVSPEESAKQEKAVPGAFTVKTTDDMELGRASNF
Ga0193707_100030313300019881SoilMWRAWGVLAITAVAVIALQKAHAANTSNNSAETEAVTVTGEATGSLTSASPEESAKQEKAVPGAFTVKTTDDMELGRASNFEDLLQRT
Ga0193707_103590333300019881SoilMARLSILAITAVAVIAIPEAEAVDTSSNAAETEEVTVTGEATGSLTSLSPEESAKQKRQVPGAFTVKTTDDMELGRASNFEDLLQRTPG
Ga0193729_105775213300019887SoilMARLSILAITAVAVIAIPEAEAVDTSSNAAETEEVTVTGEATGSLTSLSPEESAKQKRQVPGAFTVKTTDDMELGRAS
Ga0193755_107429513300020004SoilMARLSVLAITAVAVIAILDAQAVDTSNNAAETEEVTVTGEATGSLTSLSPEESAKQKTQVPGAFTVRTNDNMELGRASNFEDLLQRTPGVFLQSE
Ga0193697_109552813300020005SoilMAVCETTFGARLIGLDMARLSVLAITAVAVIAIPEAQAVDTSSNAAETEGVTVTGEAMGSLTSGSPEEAAKQKTQIPGAFTVRTADDMELGRASN
Ga0193757_100574933300020008SoilMARLSVLAITAVAVIAIPKAQAVDTANNAAETEVVTVTGEATGSLTSLSPEESAKQKTQVPGAFTVKTTDDMELGRASNFEDLLQR
Ga0193719_1001815713300021344SoilMWRAWGVLAITAVAVIALQKAHAANTSNNSAETEAVTVTGEATGSLTSASPEESAKQEKAVPGAFTVKTTDDMELGRASNFEDLLQRTPGV
Ga0193709_103647213300021411SoilVAVFETTFGVRLIVLHMARLSVLAITAVAVIAIPKAQAVDTANNAAETEVVTVTGEETGSLTSLSPEESAKQKRQVPGAFTVKTTDDMELGRASN
Ga0193750_104928113300021413SoilMNWNVANLARSFVTAVAIVGIQNTGSAEISSTPAEAEEVTVVGEATGSLTSVSPEESTKQKTQVPGAFTIKTADEMKLGRASNFEDL
Ga0193695_105317233300021418SoilMWRAWGVLAITAVAVIALQKAHAANTSNNSAETEAVTVTGEATGSLTSASPEESAKQKTAVPGAFTVKTTDDMELGRASNFEDLLQRTPGVF
Ga0210402_1047945643300021478SoilMLRSWSVLAITAVAVAAIQETQAADTSSNSAETEEVTVTGEATGSLTSVSAEESAGQKTEVPGAFTVKTADEMKLGRASN
Ga0222623_1015912633300022694Groundwater SedimentMWRRWSVLASIAVSVFGIQTAHAADTSNNPAETAEVTVTGEAPDSLTSASPEESAKQKTQVPGAFTVRTTDDMELGRASNFEDLLQRTPGVFLQSENG
Ga0222622_1083418413300022756Groundwater SedimentVAVCEATLSARLIVIHMARLRVLAITAVAVIAISEAQAVDTSNNAAETEEVTVTAEATGSLTSLSPEESAKQKTQVPGAFTVKTTDDMELGRASNF
Ga0207697_1005093133300025315Corn, Switchgrass And Miscanthus RhizosphereMRRRWSVLATAAISVFGIQTARAAETSNNSAETAEVTVTGEETGSLTSALPEESAKQKTQIPGAFTVKTTDDMDLGRASNFEDLLQRTPGVFLQSENGAE
Ga0207697_1012194533300025315Corn, Switchgrass And Miscanthus RhizosphereMARLSVLAITAVAVIAIPEAQAVDTSSNAAETEGVTVIGEAMGSLTSGSPAEAAKQKTQIPGAFTVKTTDDMDLGRASNFEDLLQRTPGVFLQSENGAE
Ga0207657_1066564513300025919Corn RhizosphereMAVCETTFGARLIGPDMARLCVLAVAAVAVIAIPKSQAVDTSSNAAETEAVTVTGEATEESLTSVSPEESAKQKTQIPGAFAVKTVDDMELGRASNFEDLLQGTA
Ga0207652_1070860713300025921Corn RhizosphereMARLCVLAVAAVAVIAIPKSQAVDTSSNTAETEAVTVTGEATEESLTSVSPEESAKQKTQIPGAFAVKTVDDMELGRASNFEDLLQGTA
Ga0207651_1177488423300025960Switchgrass RhizosphereMAVCETTFGARLIGPDMARLCVLAVAAVAVIAIPKSQAVDTSSNAAETEAVTVTGEATEESLTSVSPEESAKQKTQIPGAFAVKTVDDMELGRASNFEDLLQRTPGVFLQ
Ga0207677_1117177013300026023Miscanthus RhizosphereMARLSVLAITAVAVIAIPEAQAVDTSSNAAETEGVTVTGEAMGSLTSELPEEAAKQKTQIPGAFTVRTADDMELGRASN
Ga0209375_117963523300026329SoilVAVYEATFDVRLIRLDVARLSLLAITAVAVIAIPGAHAVDTSIDPTETERVTVTGEATGSLTSASPEKSAEQKRQVSGAFTVKTTDDMELGRSSNFE
Ga0257162_104052013300026340SoilMAVCEATFGARLIGLDMARLSVLAITAVAVITIPEAQAVDTSSNAAETEGVTVTGEATGSLTSASPEESAKQKTQVPGPFAVKTADDMELGRASNFEDLLQRIPGVFLQSEKG
Ga0179587_1103541723300026557Vadose Zone SoilMWRHWSVLAITAVSVIGIQTAQAAETSNKPAETEEVTVTAEATGSLTSVSPEESTKQKTQVPGAFTIKTADEMKLGRASNFEDLLQRTPGVFLQSE
Ga0209388_114311223300027655Vadose Zone SoilMWPRWSVLATAAVSVIGIRTAQAAEGSTKPAETEEVTVTGEGTGSLTSVSPDESTKQKTQVPGGFTIKTADEMKLGRASNFEDLLQRAPGVFLQ
Ga0268266_1226792023300028379Switchgrass RhizosphereMAVCETTFGARLIGPDMARLSVLAVAAVAVIAIPKSQAVDTSSNAAETEAVTVTGAATEESLTSVSPDESAKQKTQIPGAFAVKTVDDMELGRASNFEDLLQRTPGVFLQ
Ga0307292_1041526623300028811SoilMARLSVLAITAVAVIAILDAQAVDTSNNAAETEEVTVTGEATGSLTSLSPEESAKQKTQVPGAFTVRTNDNMELGRASNFEDLLQRTPGVFLQ
Ga0307308_1027846613300028884SoilMARLSVLAITAVAVIAIPEAEAVDSSSNAAETEEVTVTGEATGSLTSLSPEESAKRKRQVPGAFTVKTTDDMELGRASNFEDLLQRTPGVFLQSENGVE
Ga0075377_1177905613300030844SoilMWRRWSLLATTAVSVIGIQTAQAAESSNNSAESAEVTVTGEAIGSLTSGSPEESAKQKTQVPGAFTVRTTDDMELGRASNFEDLLQRTPGVFLQSENGA
Ga0170822_1530441223300031122Forest SoilMWRRWNVLAITAVAVIGIQTAKAAETSNNPAEAEEVTVTGEAIGSLTSVTHEESANQKTAVPGAFTIKTADEMKLGRASNFEDLLQR
Ga0170824_12595224513300031231Forest SoilMWRRWNVLAIKAVAVIGIQTAQAAETSNNPAEAEEVTVRGEAIGSLTSVTPEESANQKTAVPGAFTIKTADEMKLGRASNFEDLLQRTPGVFLQSEN
Ga0170820_1447873923300031446Forest SoilMAVCETTFGARLIGLDMARLSVLAIAAVAVIAIPESQAFDTSSNAAETEAVTVTGEATESLTSRSPEESAKQKTQVPGAFAVKTTDDME
Ga0170820_1758346813300031446Forest SoilMCRSWSVLAITAVVVVAIQEAQAADTSNNAAEAEGVTVTGEATGSLTSVSPEESAEQKTEVPGAFTVKTNDDMELGRASN
Ga0306918_1133717113300031744SoilMWRGWSVLANTAVAVIAIQEAQAANPSNNSAETEAVTVTGEATGSLTSASPEESTKQKTAVPGAFTVRTTDDMELGRASNFEDLLQRTPGVFLQS
Ga0307475_1056573813300031754Hardwood Forest SoilMWRCWIVLAVAAVAVTGIQGAQPADTSSNPAETEEVTVTGETTGSLTSVSPEESAKQKTAVPGAFTVKTTDDMELGRASNFEDLLQRTP
Ga0306925_1051898633300031890SoilMARLSVLAITAVTAIAIPEVQAIDTSSNAAETEAVTVTGEATGSLTSVSPEESAMQKTQIPGAFTVKTNDDMELGRASNFEDLLQRTPGVFLQS
Ga0308173_1168204323300032074SoilMAICETTFGARLIGSAMARLCVLAVAAVAVIAIPKSQAVDTSSNTAETDAVTVTGEATESLTSVSPEESAKQKTQIPGAFAVKTVDDMELGRASNFEDLLQRTPGVFLQSE
Ga0307471_10111876413300032180Hardwood Forest SoilMWRRWSVLAITTVSVIGIQIAQGAEASNDSAETAEVTVIGEATGSLTSVSPEESAKQKTQVPGAFTVKTTDEMKLGRASNFEDLLQRTPRRFPSVGKRR
Ga0307471_10361187813300032180Hardwood Forest SoilMWRRSSAPGIALVAVIGIQIAQTAETSNNPAETEGVTVTGEATGSLTSESPEQSAIQKIQVPGGLTIKDANEMKLGRASNFEDLLQ
Ga0310914_1033951033300033289SoilMARLSVLAITAVTAIAIPKAQAVDTSGNAAETEAVTVTGEATGSLTSVSPEESAEQKTAVPGAFTVKTADDMDLGRASNFED

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.