Metagenome / Metatranscriptome Family F090968

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090968
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	79 residues
Representative Sequence	VTKICESFAGGFAWVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIAQGRINTGYFASC
Number of Associated Samples	101
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.26 %
% of genes near scaffold ends (potentially truncated)	24.07 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (30.556 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.01% β-sheet: 18.35% Coil/Unstructured: 70.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00589	Phage_integrase	5.56
PF07690	MFS_1	3.70
PF05977	MFS_3	2.78
PF02954	HTH_8	2.78
PF00873	ACR_tran	1.85
PF13200	DUF4015	1.85
PF02775	TPP_enzyme_C	1.85
PF13372	Alginate_exp	1.85
PF00069	Pkinase	1.85
PF03466	LysR_substrate	1.85
PF00106	adh_short	0.93
PF13561	adh_short_C2	0.93
PF01734	Patatin	0.93
PF08281	Sigma70_r4_2	0.93
PF00578	AhpC-TSA	0.93
PF03050	DDE_Tnp_IS66	0.93
PF16576	HlyD_D23	0.93
PF13490	zf-HC2	0.93
PF00486	Trans_reg_C	0.93
PF13620	CarboxypepD_reg	0.93
PF00528	BPD_transp_1	0.93
PF01594	AI-2E_transport	0.93
PF02776	TPP_enzyme_N	0.93
PF01238	PMI_typeI_C	0.93
PF05936	T6SS_VasE	0.93
PF02518	HATPase_c	0.93
PF08240	ADH_N	0.93
PF13365	Trypsin_2	0.93
PF13495	Phage_int_SAM_4	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.41
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	2.78
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.93
COG1482	Mannose-6-phosphate isomerase, class I	Carbohydrate transport and metabolism [G]	0.93
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.93
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3522	Predicted component of the type VI protein secretion system	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.93
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.56 %
Unclassified	root	N/A	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.30 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.41 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.85 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.48 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.48 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.85 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.48 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.85 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.93 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.48 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.85 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.93 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.93 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10253867	Not Available	565	Open in IMG/M
3300001151\|JGI12713J13577_1000897	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300001174\|JGI12679J13547_1005933	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300001356\|JGI12269J14319_10064774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2053	Open in IMG/M
3300001593\|JGI12635J15846_10075368	All Organisms → cellular organisms → Bacteria	2482	Open in IMG/M
3300002245\|JGIcombinedJ26739_101565315	Not Available	556	Open in IMG/M
3300004091\|Ga0062387_100350524	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300004120\|Ga0058901_1552884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300004121\|Ga0058882_1013599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300004476\|Ga0068966_1495328	Not Available	602	Open in IMG/M
3300005468\|Ga0070707_100470863	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300005526\|Ga0073909_10006091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3565	Open in IMG/M
3300005542\|Ga0070732_10863058	Not Available	553	Open in IMG/M
3300005591\|Ga0070761_10054432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2254	Open in IMG/M
3300005610\|Ga0070763_10117886	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300005712\|Ga0070764_10569990	Not Available	688	Open in IMG/M
3300005950\|Ga0066787_10028151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300006047\|Ga0075024_100742715	Not Available	543	Open in IMG/M
3300006052\|Ga0075029_100141011	Not Available	1476	Open in IMG/M
3300006102\|Ga0075015_100064766	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300009525\|Ga0116220_10533505	Not Available	535	Open in IMG/M
3300009623\|Ga0116133_1003956	All Organisms → cellular organisms → Bacteria → Acidobacteria	3822	Open in IMG/M
3300009623\|Ga0116133_1103257	Not Available	726	Open in IMG/M
3300009628\|Ga0116125_1001660	All Organisms → cellular organisms → Bacteria	9160	Open in IMG/M
3300009634\|Ga0116124_1137963	Not Available	683	Open in IMG/M
3300009638\|Ga0116113_1190524	Not Available	527	Open in IMG/M
3300009640\|Ga0116126_1141134	Not Available	817	Open in IMG/M
3300009641\|Ga0116120_1044872	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300009645\|Ga0116106_1010593	All Organisms → cellular organisms → Bacteria → Acidobacteria	3410	Open in IMG/M
3300009665\|Ga0116135_1122055	Not Available	957	Open in IMG/M
3300009824\|Ga0116219_10641962	Not Available	582	Open in IMG/M
3300010379\|Ga0136449_102573113	Not Available	727	Open in IMG/M
3300010860\|Ga0126351_1060438	Not Available	556	Open in IMG/M
3300011120\|Ga0150983_13113940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300011120\|Ga0150983_16267149	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300012202\|Ga0137363_10011634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	5642	Open in IMG/M
3300012930\|Ga0137407_12065511	Not Available	544	Open in IMG/M
3300014201\|Ga0181537_10157386	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300014495\|Ga0182015_10003638	All Organisms → cellular organisms → Bacteria	17108	Open in IMG/M
3300014495\|Ga0182015_10981273	Not Available	525	Open in IMG/M
3300014501\|Ga0182024_10005982	All Organisms → cellular organisms → Bacteria	26963	Open in IMG/M
3300014638\|Ga0181536_10420857	Not Available	593	Open in IMG/M
3300016750\|Ga0181505_10694862	Not Available	666	Open in IMG/M
3300017823\|Ga0187818_10000423	All Organisms → cellular organisms → Bacteria	15120	Open in IMG/M
3300017925\|Ga0187856_1166315	Not Available	820	Open in IMG/M
3300017935\|Ga0187848_10450412	Not Available	528	Open in IMG/M
3300017940\|Ga0187853_10171018	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300017946\|Ga0187879_10780410	Not Available	533	Open in IMG/M
3300017996\|Ga0187891_1004738	All Organisms → cellular organisms → Bacteria	8696	Open in IMG/M
3300018005\|Ga0187878_1261611	Not Available	627	Open in IMG/M
3300018006\|Ga0187804_10031541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1995	Open in IMG/M
3300018019\|Ga0187874_10377277	Not Available	573	Open in IMG/M
3300018021\|Ga0187882_1119493	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300018024\|Ga0187881_10321851	Not Available	639	Open in IMG/M
3300019888\|Ga0193751_1005681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	6971	Open in IMG/M
3300020581\|Ga0210399_10713986	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300020581\|Ga0210399_11384650	Not Available	550	Open in IMG/M
3300021171\|Ga0210405_10000182	All Organisms → cellular organisms → Bacteria	89279	Open in IMG/M
3300021171\|Ga0210405_10026773	All Organisms → cellular organisms → Bacteria	4637	Open in IMG/M
3300021181\|Ga0210388_11455597	Not Available	573	Open in IMG/M
3300021401\|Ga0210393_10040386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3661	Open in IMG/M
3300021405\|Ga0210387_10467279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1120	Open in IMG/M
3300021407\|Ga0210383_10073151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	2865	Open in IMG/M
3300021420\|Ga0210394_10594565	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300021474\|Ga0210390_11480175	Not Available	538	Open in IMG/M
3300021478\|Ga0210402_10346922	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300022522\|Ga0242659_1116375	Not Available	542	Open in IMG/M
3300022557\|Ga0212123_10152795	All Organisms → cellular organisms → Bacteria → Acidobacteria	1778	Open in IMG/M
3300022717\|Ga0242661_1029183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	940	Open in IMG/M
3300025922\|Ga0207646_11288251	Not Available	638	Open in IMG/M
3300025929\|Ga0207664_10977789	Not Available	759	Open in IMG/M
3300026467\|Ga0257154_1067172	Not Available	565	Open in IMG/M
3300026551\|Ga0209648_10508424	Not Available	694	Open in IMG/M
3300027334\|Ga0209529_1027910	Not Available	963	Open in IMG/M
3300027439\|Ga0209332_1000084	All Organisms → cellular organisms → Bacteria	24026	Open in IMG/M
3300027545\|Ga0209008_1000842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8491	Open in IMG/M
3300027565\|Ga0209219_1082900	Not Available	794	Open in IMG/M
3300027610\|Ga0209528_1082995	Not Available	709	Open in IMG/M
3300027619\|Ga0209330_1002966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4165	Open in IMG/M
3300027648\|Ga0209420_1025112	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300027660\|Ga0209736_1136856	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300027696\|Ga0208696_1101842	Not Available	954	Open in IMG/M
3300027745\|Ga0209908_10197816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300027812\|Ga0209656_10087520	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300027821\|Ga0209811_10026170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	1930	Open in IMG/M
3300027825\|Ga0209039_10144443	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300027879\|Ga0209169_10455795	Not Available	672	Open in IMG/M
3300027908\|Ga0209006_10026834	All Organisms → cellular organisms → Bacteria	5219	Open in IMG/M
3300027911\|Ga0209698_10407970	Not Available	1061	Open in IMG/M
3300029701\|Ga0222748_1089712	Not Available	584	Open in IMG/M
3300029913\|Ga0311362_11304378	Not Available	527	Open in IMG/M
3300029952\|Ga0311346_10907819	Not Available	725	Open in IMG/M
3300030399\|Ga0311353_10255911	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300030531\|Ga0210274_1090062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300030740\|Ga0265460_11329109	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300030974\|Ga0075371_10001463	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031090\|Ga0265760_10195224	Not Available	681	Open in IMG/M
3300031708\|Ga0310686_102543822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2285	Open in IMG/M
3300031708\|Ga0310686_107880662	All Organisms → cellular organisms → Bacteria → Acidobacteria	3644	Open in IMG/M
3300031754\|Ga0307475_10585412	Not Available	894	Open in IMG/M
3300031820\|Ga0307473_11066378	Not Available	594	Open in IMG/M
3300031820\|Ga0307473_11241661	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031823\|Ga0307478_10764341	Not Available	809	Open in IMG/M
3300031962\|Ga0307479_10004919	All Organisms → cellular organisms → Bacteria	12269	Open in IMG/M
3300032160\|Ga0311301_10153785	All Organisms → cellular organisms → Bacteria → Acidobacteria	4146	Open in IMG/M
3300032174\|Ga0307470_11359089	Not Available	584	Open in IMG/M
3300032180\|Ga0307471_101168797	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300033888\|Ga0334792_004560	All Organisms → cellular organisms → Bacteria	6469	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.30%
Aquatic	Environmental → Aquatic	28.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.59%
Freshwater	Environmental → Aquatic → Freshwater	24.07%
Sediment	Environmental → Aquatic → Sediment	3.70%
Peat	Environmental → Terrestrial → Peat	3.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.07%
Loam	Environmental → Terrestrial → Soil → Loam	22.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.70%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.33%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030531	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102538672	3300000567	Peatlands Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMRNSREVVELYGRFMGGSDWNTGNSGRLGQSRHFMQMAQGRINTGYFASC*
JGI12713J13577_10008973	3300001151	Forest Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQKSREVVELYGRFVGGSDRNTSNSGRFGQFVQFMHMAQGRINTGYFASC*
JGI12679J13547_10059331	3300001174	Forest Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQNSREVAELYGRFMGGSDRNTGNSGRLGQSRHFMQMAQGRINTGYFASC*
JGI12269J14319_100647743	3300001356	Peatlands Soil	VTKICESFAGGFAGVGKILDRPPQPVEGVLRLRKSREVVELYGRFMGGSDRNTSNSGRLGQSRHFMHMAQGRINTGYFASC*
JGI12635J15846_100753683	3300001593	Forest Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQKSREVVELYGRFMGGSDRNTSNSGRFGQFVQFMHMAQGRINTGYFASC*
JGIcombinedJ26739_1015653152	3300002245	Forest Soil	VTKICESIAGGFARVGRTLDRPPQPVEGVLRMQNSREVVELYGRFMGGSDRNTGNSGRLGQSRHFMQMAQGRINTGDYASC*
Ga0062387_1003505242	3300004091	Bog Forest Soil	VTKICESCAGGFARVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSVQFMHIVQSRISTGYFATC*
Ga0058901_15528841	3300004120	Forest Soil	ESFAGGFARVGRTLDRPPQPVEGVLRMQNSREVVELYGRFMGGSDQNTDNLGRFEQSGHFMHVVQSRINTGDFASR*
Ga0058882_10135991	3300004121	Forest Soil	FARVGRTLDRSPQPVECVLRMQNGGEVVEIYGRFMGGSDRNTSNSGRFGQPVQFMQMVQGRINTGYFASC*
Ga0068966_14953281	3300004476	Peatlands Soil	ESFAGGFAGVGKILDRPPQPVEGVLRLRKSREVVELYGRFMGGSDRNTSNSGRLGQSRHFMHMAQGRINTGYFASC*
Ga0070707_1004708632	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTKICESLAGGFAQVGRTLDRPPQPIKGLLRMQKSGKVAEIYGRFMGGSDRNTSNSGRFGQFRHFMQMAQGRINTGYFASC*
Ga0073909_100060911	3300005526	Surface Soil	VTKICESFAGGFARVRRTLDRPPQLVEGLLRMQKSGEVDQLYGRFMGGSDRNTSNSGRFGQAVQFMQRVQCRINTGYFASC*
Ga0070732_108630581	3300005542	Surface Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQESREVVELYGRFMGGSDRNTSNSGRCGQSRHFMQMAQSRINTGYFASR*
Ga0070761_100544322	3300005591	Soil	VTKTCESFAGGFARIGRTLDRPPQPVEGILRMQESGELAELYGRFMGGSDRNTGNSGRFGQSGHFMQMVQSRINTGDCVSC*
Ga0070763_101178862	3300005610	Soil	VTKTCESFAGGFARIGRTLDRPPQPVEGILRMQESGEVAELYGRFMGGSDRNTGNSGRFGQSGHFMQMVQSRINTGDFASR*
Ga0070764_105699901	3300005712	Soil	VTKTCESFAGGFARIGRTLDRPPQPVEGILRMQESGEVAELYGRFMGGSDRNTGNSGRFGQSGHFMQMVQSRINTGDCASR*
Ga0066787_100281512	3300005950	Soil	VTKICESCAGGFSRVGRTPDRPPQPVEGVLRLQKGGELAELYGRFMGGSDRNTGNSGRFVQSVQFMQMAQGRINTGYFASC*
Ga0075024_1007427151	3300006047	Watersheds	VTKICESFAGGFARGGRALDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRSGQSRHFMQMAQSRINTGYFASC*
Ga0075029_1001410112	3300006052	Watersheds	VTKICESFAGGFAHVGRNLDRPQPPVEGVLRMRKSGEVVELCGRFMGGSDRNTSNSGRFGRSMQYMQFVQSRINTGYFASR*
Ga0075015_1000647661	3300006102	Watersheds	VTKICESFAGGFARVRRTLDRPPQPVEGLLRMQKSGEAAELYGRFMGGSDRNTGNSGQSEQTVHGMQIVQCRINTGYFASR*
Ga0116220_105335051	3300009525	Peatlands Soil	VTKICESFAGGFAGVGKILDRPPQPVEGVLRLRKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMHMAQGRINTG
Ga0116133_10039564	3300009623	Peatland	VTKICESCAGGFAWVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIVQSRINTGYFASC*
Ga0116133_11032571	3300009623	Peatland	VTKICESFAGGFAWVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIAQGRINTGY
Ga0116125_10016605	3300009628	Peatland	VTKICESFAGGFAWVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIAQGRINTGYFASC*
Ga0116124_11379631	3300009634	Peatland	VTKICESFAGGFAWVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIVQSRINTGYFASC*
Ga0116113_11905241	3300009638	Peatland	VTKICESFAGGFAWVGRTLDRPPQPVEGVLPMQKSREVGELYGRFMGGSDRNTGNSGRFVQSVQFM
Ga0116126_11411341	3300009640	Peatland	VTKICESFASGFAWVGRTLDRPPRPVEGVLRAQKSGEVVELYGRFMGGSDRNTGNSVRFGQFVQFMQMAQGRINTGYFASC*
Ga0116120_10448722	3300009641	Peatland	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQNSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIVQSRINTGYFASC*
Ga0116106_10105932	3300009645	Peatland	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQNSREVVELYGRFMGGSDRNTGNSVRFGQFVQFMQMAQGRINTGYFASC*
Ga0116135_11220552	3300009665	Peatland	VTKICESFAGGFAWVGRTLDRPPQPVEGVLRMQKSGEVVEIYGRFMGGSDRNTSNSGRLAHSMQFMQMAQSRINAAYFASH*
Ga0116219_106419621	3300009824	Peatlands Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRLRKSREVVELYGRFMGGSDRNTSNSGRFGQSVQFMQMAQGRINTGYFASR*
Ga0136449_1025731131	3300010379	Peatlands Soil	VTKICESFADGFARVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSVQFMQMAQGRINTGYFASR*
Ga0126351_10604382	3300010860	Boreal Forest Soil	ESFAGGFAWVGRTLDRAPQPVEGVLRMQNSREVAELYGRFMGGSDRNTGNSGRFGQSRHFMHMAQGRINTGYFASR*
Ga0150983_131139401	3300011120	Forest Soil	SFAGGFARVGRTLDRPPQPVEGVLRMQNSREVVELYGRFMGGSDQNTDNLGRFEQSGHFMHVVQSRINTGDFASR*
Ga0150983_162671492	3300011120	Forest Soil	GRTQDRPPQPVEVVLPMQKSREVGELYGRFMGGSDRNTSNSGRFMQSVQFMQIAQGRINTGYFASC*
Ga0137363_100116345	3300012202	Vadose Zone Soil	VTRICESFAGGFARVGRTLDRPPHPVECVLRVQKSREVVELYGRFMGGSDRNTSNSGRFGQSVQFMQMAQSRINTGYFASC*
Ga0137407_120655111	3300012930	Vadose Zone Soil	VTKICESFAGGFVQGGRNLDRPEQPVQGVLLIQKSGEVAQLYGRFMGGSDRNMSNSGRLGHSVQFMQLVQRRINTGYFASR*
Ga0181537_101573862	3300014201	Bog	VTKICECFAGGFARVGRTLDRSPQPVEGVLRMQGSWEEVELYGRFMGGSDRNTSNPGRPGQFVQLMQFVQSRINTGYFASC*
Ga0182015_100036382	3300014495	Palsa	VTKICESFAGGFARVGRTLDRPKQPVEGVLRMRKSGEEVELYGRFMGGSDRNTSNSGRFGQSRHFMQMAQSRINTGYFASC*
Ga0182015_109812731	3300014495	Palsa	VTKTCESFAGGFAEIGRTLDRPPQPVEGVLRTQKSGEVVELYGRFMGGSDRNTSNSGRSGQSRHFMQMAQSRINTAYFASC*
Ga0182024_1000598213	3300014501	Permafrost	VTKICESLAGGFAQVGRTLDRPPQPIKGLLRMQKSGKVAEIYGRFMGGSDRNTSNSGRFGQSRHFMQIAQSRINTSYFASC*
Ga0181536_104208572	3300014638	Bog	VTKICESCAGGFARVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDQIRIISGHLGQFVQFMQTAQVRINTGYFASR*
Ga0181505_106948622	3300016750	Peatland	GFAWVGRTLDRPPQPVEGVLHLQKSGEVVELYGRFMGGSDRNTGNSGRLGQSRHFMQIAQGRINTAYFASR
Ga0187818_100004234	3300017823	Freshwater Sediment	VTKICESCAGGFAWVGRTLDRPPQPVEGVLRMQNSREVAELYGRFMGGSDRNTSNSGRFGQSVQFMQMAQGRINAGYFASC
Ga0187856_11663152	3300017925	Peatland	VTKICESCAGGFAWVGRTLDRPPQPVEGVLRMQKSRELAELYGRFMGGSDRNTSNSGRFGQSTHFMQMAQGRINTGYFASC
Ga0187848_104504122	3300017935	Peatland	VTKICESFAGGFAWVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIVQSRINTGYFASC
Ga0187853_101710182	3300017940	Peatland	VTKICESCAGGFAWVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIVQSRINTGYFASR
Ga0187879_107804101	3300017946	Peatland	VTKICESFAGGFAWVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIAQGRINTGYFASC
Ga0187891_100473814	3300017996	Peatland	VTKICESCAGGFARVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMRMAQSRINTGYFASC
Ga0187878_12616112	3300018005	Peatland	VTKICESCAGGFAWVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIVQSRINTGYFASC
Ga0187804_100315413	3300018006	Freshwater Sediment	VTKICESCTGGFARVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFAQSVQFMQMAQCRINTGYFASR
Ga0187874_103772771	3300018019	Peatland	ISVTKICEGFAGGFARVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMRMAQSRINTGYFASC
Ga0187882_11194931	3300018021	Peatland	VTKICESCAGGFAWVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMRMAQSRINTGYFASC
Ga0187881_103218512	3300018024	Peatland	VTKICESFAGGFAWVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMQIVQSRINTGYFASC
Ga0193751_10056811	3300019888	Soil	VTKICESCAGGFARVGRTLDRPPRLVKGLLRTQKSGKVVELYGRFMGGSDRNTSNSGRLAHSVQFMHMAQGRINTGYFASC
Ga0210399_107139861	3300020581	Soil	VTKICESIAGGFARVGRTPDRPPQPVEDVLRMQNSREVVELYGRFMGGSDRNTGNSGRLGQSRHFMQIVQSRINTGYFASC
Ga0210399_113846501	3300020581	Soil	VTKICESLAGGFAQVGRTLDRPPQPIKGLLRMQKSRKVAEIYGRFMGGSDRNTSNSGRFGQSRHFMQMAQGRINTDYFASC
Ga0210405_1000018226	3300021171	Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRLQESGEVVEPYGRFMGGSDRNTSNSVRFVQSVQFMQMAQGRINTGYFASR
Ga0210405_100267733	3300021171	Soil	VTKICESFADGFARVRRTLDRPPQPVEGLLRMQKSGEVAQLYGRFMGGSDWNTSNSGRFGQAVQFMQTVQCRINTGYFASR
Ga0210388_114555971	3300021181	Soil	VTKICESFAGGFAWVGRTQDRPPQPVEVVLPMQKSREVGELYGRFMGGSDRNTSNSGRFMQSVQFMQIAQGRINTGDFASC
Ga0210393_100403863	3300021401	Soil	VTKICESFAGGFAWVGRTQDRPPQPVEVVLPMQKSREVGELYGRFMGGSDRNTSNSGRFMQSVQFMQIAQGRINTGYFASC
Ga0210387_104672791	3300021405	Soil	VTKICESFAGGFAWVGRTLDRPPQPVEGLLRVQKSREAVDLYGRFMGGSDRNTSNSGRFVQSVQFMQMA
Ga0210383_100731514	3300021407	Soil	VTKTCESFAGGFARIGRTLDRPPQPVEGILRMQESGEVAELYGRFMGGSDRNTGNSGRFGQSGHFMQMVQSRINTGDCVSC
Ga0210394_105945652	3300021420	Soil	VTKTCESFAGGFARIGRTLDRPPQPVEGILRMQESGELAELYGRFMGGSDRNTGNSGRFGQSGHFMQMVQSRINTGDFASR
Ga0210390_114801752	3300021474	Soil	VTKTCESFAGGFARIGRTLDRPPQPVEGILRMQESGEVAELYGRFMGGSDRNTGNSGRFGQSGHFMQMVQSRI
Ga0210402_103469222	3300021478	Soil	VTKICESFASGFAWVGRTLDRPPQPVEGVLRMQKSGEVAELYGRFMGGSDRNTSNSGRFGQSVQFMHMAQGRINTDSFASR
Ga0242659_11163752	3300022522	Soil	SVTKICESFAGGFAWVGRTQDRPPQPVEVVLPMQKSREVGELYGRFMGGSDRNTSNSGRFMQSVQFMQIAQGRINTGYFASC
Ga0212123_101527953	3300022557	Iron-Sulfur Acid Spring	VTKICESFAGGFARVGRTLDRGPQPVESVLRMQNSREVVELYGRFMGGSDRNTGNSGRLGQSRHFMQMAQGRINTGYFASC
Ga0242661_10291832	3300022717	Soil	CESFAGGFARVGRTLDRPPQPVEGVLRLQESGEVVEPYGRFMGGSDRNTSNSVRFVQSVQFMQMAQGRINTGYFASR
Ga0207646_112882511	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTKICESLAGGFAQVGRTLDRPPQPIKGLLRMQKSGKVAEIYGRFMGGSDRNTSNSGRFGQFRHFMQMAQGRINTGYFASC
Ga0207664_109777891	3300025929	Agricultural Soil	VTKICESFAGGFARVRRTLDRPPQLVEGLLRMQRSGEVAQLYGRFMGGSDRNTSNSGRFGQAVQFMQTVQCRINTGDYASR
Ga0257154_10671722	3300026467	Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQKSREVVELYGWFMGGSDRNTSNSGRFGQSRHFMQMAQGRINTGYFASC
Ga0209648_105084242	3300026551	Grasslands Soil	VTKTCESVSDGFAQGGRNLDRPQRPVQGVLLIQKSGELSQLYGRFMGGSDRNMSNLGRLGQSVQFMQMVQ
Ga0209529_10279101	3300027334	Forest Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQKSREVVELYGRFMGGSDRNTSNSGRFGQFVQFMHMAQGRINTGYFASC
Ga0209332_10000841	3300027439	Forest Soil	VTKICESCAGGFAWVGRTLDRPPQPVEGVLHMQKTWEVVQLYGRFMGGSDRNTGNSGRFGQSRHFMHMAQGLINTGYFASC
Ga0209008_100084211	3300027545	Forest Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQKSREVVELYGRFVGGSDRNTSNSGRFGQFVQFMHMAQGRINTGYFASC
Ga0209219_10829001	3300027565	Forest Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQNSREVAELYGRFMGGSDRNTGNSGRLGQSRHFMQMAQSRINTGYFASC
Ga0209528_10829951	3300027610	Forest Soil	VTKICESIAGGFARVGRTLDRPPQPVEGVLRMQNSREEVELYGRFMGGSDRNTGISGRLGQSRHFMQMAQGRINTGYFASC
Ga0209330_10029663	3300027619	Forest Soil	VTKICESVAGGFARVGRTLDCPPQPVEGVLRMQKSREVVELHGRFMGGSDRNTSNSGRFGQSVQFMHMAQGRINTGYFASC
Ga0209420_10251122	3300027648	Forest Soil	VTKICESVAGGFARVGRTLDCPPQPVEGVLRMQKSREVVELHGRFMGGSDRNTSNSGRFGQSVQFMHMAQGRISTGYFASC
Ga0209736_11368562	3300027660	Forest Soil	VTKICESFAGGFARVGRTLDRPPQPVEGVLRMQKSREVVELYGRFMGGSDRNTSNSGRFGQSGHFMQMAQSRINTGDCASR
Ga0208696_11018421	3300027696	Peatlands Soil	VTKICESFAGGFAGVGKILDRPPQPVEGVLRLRKSREVVELYGRFMGGSDRNTSNSGRLGQSRHFMHMAQGRINTGYFASC
Ga0209908_101978162	3300027745	Thawing Permafrost	VTKICESFAGGFARVGRTLDRPQQPVEGVLRMQNSREVVELYGRFMGGSDRNTGNSGRLGQSRHFMQLAQGRINTAYFASR
Ga0209656_100875201	3300027812	Bog Forest Soil	VTKICESFASGFAQVGRNSDRLQRPVKGVLHLQKSGEVAELYGRFMGGSDRNRSNSGRFGQSMQFMQIVQRRINTGDCASR
Ga0209811_100261703	3300027821	Surface Soil	TKICESFAGGFARVRRTLDRPPQLVEGLLRMQKSGEVDQLYGRFMGGSDRNTSNSGRFGQAVQFMQRVQCRINTGYFASC
Ga0209039_101444432	3300027825	Bog Forest Soil	VTEICESFAGGFARVGRTLDRPPQPVEGVLDMQKNGEVVELYGRFMGGSDRNTSISGRFGQSVQFMQMAQGRINTGYFASR
Ga0209169_104557951	3300027879	Soil	VTKTCESFAGGFARIGRTLDRPPQPVEGILRMQESGEVAELYGRFMGGSDRNTGNSGRFGQSGHFMQMVQSRINTGDCASR
Ga0209006_100268346	3300027908	Forest Soil	VTKICESCAGGFARVGRTLDRPPQPVEGVLHMQKSREVVELYGRFMGGSDRNTSNSGRFGQSRHFMQMAQGPINTGDFASR
Ga0209698_104079701	3300027911	Watersheds	VTKICESFAGGFAHVGRNLDRPQPPVEGVLRMRKSGEVVELCGRFMGGSDRNTSNSGRFGRSMQYMQFVQSRINTGYFASR
Ga0222748_10897122	3300029701	Soil	ESIAGGFARVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRSGQSRHFMQMAQSRINTGYFASC
Ga0311362_113043781	3300029913	Bog	VTKTCESFASGFAWVGRTLDRPPQPVEGVLRMQGSGEEVELYGRFMGGSDRNTSNSGRPGQFVQLMQFVQSRINTGYFASC
Ga0311346_109078191	3300029952	Bog	VTKTCESFASGFAWVGRTLDRPLRPVEGVLRTQKSGEVVELYGRFMGGSDRNTSNSGRPGQFVQLMQFVQSRINTGYFASC
Ga0311353_102559112	3300030399	Palsa	VTKICESFASGFAWVGRTLDRPPRPVEGVLRTQKSGEVVELYGRFMGGSDRNTSNSGRFGQSVQFMHMAQGRINTDSFASC
Ga0210274_10900621	3300030531	Soil	NKICESFASGFAWVGRTLDRPPRPVEGVLRTQKSGEVVEIYGWFMGGSDRNTSNSGCFGPFRHFMQMAQGRINTGYFASC
Ga0265460_113291093	3300030740	Soil	GFARVGRTLDRPPQPVEGVLRMQKSREVVELYGRFMGGSDRNTSNSGRFGQSMHFMQMAQGRINTGYFASC
Ga0075371_100014633	3300030974	Soil	DGFARIGRTLDRPPQPVEGVLRMQNSREVAELYGRFMGGSDRNTSNSGRFGQSVQFMQMVQSRINTGYFASR
Ga0265760_101952241	3300031090	Soil	VTKICESCAGGFARVGRTPDRPPQPVEGVLHMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSRHFMQMAQGRINTGYFASC
Ga0310686_1025438223	3300031708	Soil	VTKICESLAGGFAWVGRTLDRPPQPVEGVLPMQKSREVGELYGRFMGGSDRNTGNSGRFVQSVQFMQMTQGRI
Ga0310686_1078806623	3300031708	Soil	VTKICESFASGFAWVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSVPFMHMAQGRINTGDCASR
Ga0307475_105854121	3300031754	Hardwood Forest Soil	ESLAGGFAQVGRTLDRPPQPIKGLLRMQKSGKVAEIYGRFMGGSDRNTSTSGRFGQSRHFMQMAQSRINTGDCASR
Ga0307473_110663781	3300031820	Hardwood Forest Soil	VTKICESFAGGFARIGRTLDRPPQPVEGVLRMQKSGEVAELYGRFMGGSDRNTSNSGRFGQSVQFMHMAQGRINTDSFASC
Ga0307473_112416612	3300031820	Hardwood Forest Soil	VTRICESFAGGFARVGRTLDRPPQQVEGVLRVQKSREVVELYGRFMGGSDRNTSNSGRFGQSVQFMQMTQSRINTGYFASR
Ga0307478_107643412	3300031823	Hardwood Forest Soil	VTKVCESLAGGFAQVGRTLDRPPQPIKGLLRMQKSGKVAEIYGRFMGGSDRNTSTSGRFGQSRHFMQMAQSRINTGDCASR
Ga0307479_100049195	3300031962	Hardwood Forest Soil	VTKICESFASGFARVGRTLDRPPQPAEGVLRMQKSGEVAEPYGRFMGGSDRNTSNSGRFGQSVQFMQMVQGRINTGDCASR
Ga0311301_101537852	3300032160	Peatlands Soil	VTKICESFADGFARVGRTLDRPPQPVEGVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQSVQFMQMAQGRINTGYFASR
Ga0307470_113590891	3300032174	Hardwood Forest Soil	VTKICESVSDGFAQGGRDLDRPQRPVQGVLLIQKSGELAQLYGRFMGGSDRKMSNLGRLGQSVQFMQLVQCRINTGDCASR
Ga0307471_1011687972	3300032180	Hardwood Forest Soil	VTKICESFAGGFARVGRILDRPPQPVEAVLRMQKSGEVVELYGRFMGGSDRNTSNSGRFGQTVQFMQMAQRRINTGYFASR
Ga0334792_004560_1639_1884	3300033888	Soil	MTKICESFASGFAWVGRTLDRPPRPVEGVLRTQKSGEVVELYGRFMGGSDRNTSNSGRFGQSVQFMHMAQGRINTDYFASC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090968

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences