Metagenome / Metatranscriptome Family F091258

Basic Information
Family ID	F091258
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	57 residues
Representative Sequence	MHAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIS
Number of Associated Samples	96
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.18 %
% of genes near scaffold ends (potentially truncated)	29.91 %
% of genes from short scaffolds (< 2000 bps)	86.92 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.449 % of family members)
Environment Ontology (ENVO)	Unclassified (24.299 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.617 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 73.33% β-sheet: 0.00% Coil/Unstructured: 26.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF05235	CHAD	44.86
PF01028	Topoisom_I	11.21
PF09970	DUF2204	1.87
PF00571	CBS	1.87
PF01569	PAP2	0.93
PF00999	Na_H_Exchanger	0.93
PF04055	Radical_SAM	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	44.86
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	44.86
COG3569	DNA topoisomerase IB	Replication, recombination and repair [L]	11.21
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.93
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.93
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.93
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.93
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	97.20 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	95.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	85.98 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	73.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.61 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	73.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.61 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	73.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.61 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	73.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.61 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0671426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300004479\|Ga0062595_100341429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1037	Open in IMG/M
3300005093\|Ga0062594_100116455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1649	Open in IMG/M
3300005162\|Ga0066814_10005422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1370	Open in IMG/M
3300005174\|Ga0066680_10089695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1866	Open in IMG/M
3300005177\|Ga0066690_10776966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	625	Open in IMG/M
3300005178\|Ga0066688_10035273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2799	Open in IMG/M
3300005187\|Ga0066675_11269899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300005338\|Ga0068868_100388649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1202	Open in IMG/M
3300005406\|Ga0070703_10000283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23537	Open in IMG/M
3300005546\|Ga0070696_100271007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1291	Open in IMG/M
3300005549\|Ga0070704_100750115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	869	Open in IMG/M
3300005554\|Ga0066661_10516748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	720	Open in IMG/M
3300005556\|Ga0066707_10347707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	970	Open in IMG/M
3300005559\|Ga0066700_10176757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1463	Open in IMG/M
3300005568\|Ga0066703_10551705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	677	Open in IMG/M
3300006031\|Ga0066651_10478724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300009012\|Ga0066710_100486903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1856	Open in IMG/M
3300009090\|Ga0099827_11932591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300009137\|Ga0066709_100101810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3521	Open in IMG/M
3300009137\|Ga0066709_103138112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300009148\|Ga0105243_11310272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300010078\|Ga0127487_118203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300010085\|Ga0127445_1009449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300010106\|Ga0127472_1141854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300010119\|Ga0127452_1058561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300010132\|Ga0127455_1070698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300010133\|Ga0127459_1130879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300010147\|Ga0126319_1341082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1226	Open in IMG/M
3300010147\|Ga0126319_1389830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1760	Open in IMG/M
3300010154\|Ga0127503_10782676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300012198\|Ga0137364_11221143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300012200\|Ga0137382_11123586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300012200\|Ga0137382_11283982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300012208\|Ga0137376_10306156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1379	Open in IMG/M
3300012211\|Ga0137377_10024371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5406	Open in IMG/M
3300012211\|Ga0137377_11161342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300012212\|Ga0150985_109218751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300012351\|Ga0137386_11306754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012356\|Ga0137371_10767356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300012393\|Ga0134052_1045846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300012901\|Ga0157288_10043674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300012912\|Ga0157306_10237358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300012955\|Ga0164298_10887760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300012955\|Ga0164298_11250811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300012957\|Ga0164303_10144242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1251	Open in IMG/M
3300012958\|Ga0164299_10152610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1280	Open in IMG/M
3300012960\|Ga0164301_11520496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300012961\|Ga0164302_11383592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300012984\|Ga0164309_11013506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300012984\|Ga0164309_11652827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300012986\|Ga0164304_10195255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1317	Open in IMG/M
3300012989\|Ga0164305_11418134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300013297\|Ga0157378_10005304	All Organisms → cellular organisms → Bacteria	11320	Open in IMG/M
3300013770\|Ga0120123_1028868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144	Open in IMG/M
3300014823\|Ga0120170_1032515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1309	Open in IMG/M
3300015077\|Ga0173483_10201781	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300015371\|Ga0132258_10218498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4636	Open in IMG/M
3300018027\|Ga0184605_10012917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3236	Open in IMG/M
3300018027\|Ga0184605_10166767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	995	Open in IMG/M
3300018061\|Ga0184619_10271138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300018071\|Ga0184618_10272148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300018468\|Ga0066662_11823519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300019869\|Ga0193705_1004379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3100	Open in IMG/M
3300019885\|Ga0193747_1007308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2672	Open in IMG/M
3300020002\|Ga0193730_1155468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300020004\|Ga0193755_1222230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300020080\|Ga0206350_11299959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300021080\|Ga0210382_10020582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2377	Open in IMG/M
3300021344\|Ga0193719_10027904	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300021415\|Ga0193694_1001997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2899	Open in IMG/M
3300021418\|Ga0193695_1100683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300022195\|Ga0222625_1615966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300022756\|Ga0222622_10227966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1251	Open in IMG/M
3300025899\|Ga0207642_11114636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300025935\|Ga0207709_10388464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300026315\|Ga0209686_1150177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300026332\|Ga0209803_1305254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300026530\|Ga0209807_1255126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300026537\|Ga0209157_1083111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1566	Open in IMG/M
3300026542\|Ga0209805_1288049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300027748\|Ga0209689_1053130	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2260	Open in IMG/M
3300027748\|Ga0209689_1273880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300027821\|Ga0209811_10146566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300028707\|Ga0307291_1025968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1352	Open in IMG/M
3300028710\|Ga0307322_10044956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1068	Open in IMG/M
3300028718\|Ga0307307_10032564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1485	Open in IMG/M
3300028754\|Ga0307297_10244380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300028768\|Ga0307280_10031422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1588	Open in IMG/M
3300028784\|Ga0307282_10150109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1103	Open in IMG/M
3300028807\|Ga0307305_10555548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300028810\|Ga0307294_10027091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1553	Open in IMG/M
3300028811\|Ga0307292_10053273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M
3300028812\|Ga0247825_10469321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	894	Open in IMG/M
3300028819\|Ga0307296_10012407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4477	Open in IMG/M
3300028819\|Ga0307296_10254799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	955	Open in IMG/M
3300028824\|Ga0307310_10108985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1240	Open in IMG/M
3300028828\|Ga0307312_10148063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1488	Open in IMG/M
3300028828\|Ga0307312_10257748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1130	Open in IMG/M
3300028876\|Ga0307286_10203136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300028880\|Ga0307300_10246724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300030336\|Ga0247826_11149384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300030830\|Ga0308205_1035816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300030830\|Ga0308205_1049273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300031226\|Ga0307497_10049648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1465	Open in IMG/M
3300031740\|Ga0307468_102077888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300032205\|Ga0307472_100604221	All Organisms → cellular organisms → Bacteria → Terrabacteria group	969	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.46%
Host-Associated	Host-Associated	6.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.11%
Aquatic	Environmental → Aquatic	9.35%
Plants	Host-Associated → Plants	6.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.11%
Freshwater	Environmental → Aquatic → Freshwater	4.67%
Sediment	Environmental → Aquatic → Sediment	4.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.67%
Loam	Environmental → Terrestrial → Soil → Loam	3.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010078	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091258

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_06714262	3300000033	Soil	MXVVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR
Ga0062595_1003414291	3300004479	Soil	MHAVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR
Ga0062594_1001164552	3300005093	Soil	MHAGEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLGWIETARPDQISR
Ga0066814_100054223	3300005162	Soil	MHVVEDDDDARYLASLASQVLGIQRSQAERLAEAYVREQPGSGWERFLRWIETARPDQISR*
Ga0066680_100896952	3300005174	Soil	MHAAEDDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGSRR*
Ga0066690_107769662	3300005177	Soil	MHAAEDDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGARR*
Ga0066688_100352733	3300005178	Soil	MHAAEEDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGARR*
Ga0066675_112698992	3300005187	Soil	VDAVEEDDEARYLASLASQVLGIRRSQAERLAERYVREVPGSGWERFLRWISDAPRR*
Ga0068868_1003886492	3300005338	Miscanthus Rhizosphere	MHAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR*
Ga0070703_1000028317	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MHASEDDDARYLASLASQVLGIRRPQAERLAERYLRELPGSGWERFLRWIADGSRR*
Ga0070696_1002710071	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MHAGEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRW
Ga0070704_1007501151	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MHLVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIE
Ga0066661_105167482	3300005554	Soil	MHAAEEDDEARYLASLASQVLGIRRPQAERLAERYVRELHGSGWERFLRWISDGARR*
Ga0066707_103477072	3300005556	Soil	MHTAEEDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGARR*
Ga0066700_101767572	3300005559	Soil	MHAAEDDDEARYLASLASQVLGIRRPQAERLAERYVRELHGSGWERFLRWISDGARR*
Ga0066703_105517052	3300005568	Soil	MHAAEDDDEARYLASLASQVLGIRRAQAERLAERYVRELPGSGWERFLRWISDGARR*
Ga0066651_104787242	3300006031	Soil	MHAVDRDDEARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDHMSR*
Ga0066710_1004869033	3300009012	Grasslands Soil	MELAEDDDDARYLASLASQVLGIRRSQAERLAERYVREVPGSGWEPFLRWIADAPRR
Ga0099827_119325911	3300009090	Vadose Zone Soil	MDTVEDDDEARNLASLASQVLGIRRPQAERLAERYVRELPGSDWERFLRWISDGSRR*
Ga0066709_1001018104	3300009137	Grasslands Soil	MELAEDDDDARYLASLASQVLGIRRSQAERLAERYVREVPGSGWEPFLRWIADAPRR*
Ga0066709_1031381122	3300009137	Grasslands Soil	MLAAEEDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGSRR*
Ga0105243_113102722	3300009148	Miscanthus Rhizosphere	MHAVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLGWIETARPDQISR
Ga0127487_1182032	3300010078	Grasslands Soil	MHLAEDDDETRYLANVASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGSRR*
Ga0127445_10094491	3300010085	Grasslands Soil	MDTIEDDDEARYLASLASQILGIRRPQAERLAERFVRELPGSDWERFLRWISDGSRR*
Ga0127472_11418542	3300010106	Grasslands Soil	MDTIEDDDEARYLASLASQILGIRRPQAERLAERFVRELPGSDWERSL
Ga0127452_10585611	3300010119	Grasslands Soil	MHLAEDDDETRYLANLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWIS
Ga0127455_10706982	3300010132	Grasslands Soil	MHLAEDDDETRYLANLASQVLGIRRPQAERLAERYVRELPGSGWERFL
Ga0127459_11308792	3300010133	Grasslands Soil	MDTIEDDDEARYLASLASQILGIRRPQAERLAERFVRELPGSDWERFLRWISDGS
Ga0126319_13410823	3300010147	Soil	MQALEDDDDARSLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIQTARPDQISR*
Ga0126319_13898302	3300010147	Soil	MHAVGDDDDARSLASLASEVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR*
Ga0127503_107826761	3300010154	Soil	MHTVEDDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLGWISDGSRR*
Ga0137364_112211432	3300012198	Vadose Zone Soil	MRAAEENAEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWIADGSRP*
Ga0137382_111235862	3300012200	Vadose Zone Soil	MHAVGDDDAARSLASLASEVLGIKRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR*
Ga0137382_112839821	3300012200	Vadose Zone Soil	MDTVEDDDEARNLASLASQVLGIRRPQAERLAERYVRLPGSDWERFL
Ga0137376_103061563	3300012208	Vadose Zone Soil	MQAVERDDEARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDHISR*
Ga0137377_100243715	3300012211	Vadose Zone Soil	MHAAEGDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGSRR*
Ga0137377_111613421	3300012211	Vadose Zone Soil	MHATEDDDARYRASLASQVLGIRRPQAERLAERYLRELPGSGWERFLRWIADGSRR*
Ga0150985_1092187512	3300012212	Avena Fatua Rhizosphere	MHAVGDDDAARSLASLASEVLGLQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR*
Ga0137386_113067541	3300012351	Vadose Zone Soil	MHLAEDDDETRYLANVASQVLGIRRPQAERLAERYVRELPGSGWERFLR
Ga0137371_107673562	3300012356	Vadose Zone Soil	MNATEEDDDPRYLASLASQVLGIRRPQAERLAERYVQELPGSGWERFLRWIADGSRR*
Ga0134052_10458461	3300012393	Grasslands Soil	MQAVEDDDDARSLASLASQVLGIQRSQAERLAEAYVRELPGFGWERFLRWIQTARPDQISL*
Ga0157288_100436742	3300012901	Soil	MAEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIGR*
Ga0157306_102373581	3300012912	Soil	MHAVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGLGWERFLRWIETARPDQIGR
Ga0164298_108877602	3300012955	Soil	MHAVDDDDARYLASLASQVLGIQRAQAERLAEAYVRELPGSGWQRFLRWIETARPDQIS*
Ga0164298_112508111	3300012955	Soil	MRAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWQRFLRWIE
Ga0164303_101442422	3300012957	Soil	MRAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR*
Ga0164299_101526103	3300012958	Soil	VHAVEDDDARSLASLASQILGIQRPQAERLAEAYVRENPGSGWERFLRWIETAP
Ga0164301_115204961	3300012960	Soil	MRAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPASGWERFLRWIETARPDQISR*
Ga0164302_113835921	3300012961	Soil	MHAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWQRFLRWIETARPDQIS
Ga0164309_110135062	3300012984	Soil	YLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIS*
Ga0164309_116528271	3300012984	Soil	MHAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRERPGSGWERFLRWIETARPDQISR*
Ga0164304_101952552	3300012986	Soil	MRAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWQRFLRWIETARPDQIS
Ga0164305_114181341	3300012989	Soil	MHAVEDDDDARFLASLASQVLGIQRSQAERLAEAYVRELPGSGWQRFLRWIETARPDQIS
Ga0157378_100053042	3300013297	Miscanthus Rhizosphere	MHAGEDDDARYLASRAAQVLGIQRSQAERLAEAYVRELPGSGWERFLGWIETARPDQISR
Ga0120123_10288682	3300013770	Permafrost	MSEVEDDDAARYLASLASQVLGIRRPQAERLAERYVRELSGSGWERFLRWISDGSHR*
Ga0120170_10325152	3300014823	Permafrost	MHVAQDDDEARYLASLASQVLGIRRPQAERLADRYVRELPGSGWERFLRWISDGSRR*
Ga0173483_102017812	3300015077	Soil	MAEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGLGWERFLRWIETARPDQIGR*
Ga0132258_102184983	3300015371	Arabidopsis Rhizosphere	VHAVEDDDARSLASLASQILGIQRPQAERLAEAYVRENPGSGWERFLRWIETARPDQIGP
Ga0184605_100129172	3300018027	Groundwater Sediment	MHAVEDDDDARYLANLASQVLGIQRSQAERLAEAYIRELPGSGWERFLRWIETARPDQIS
Ga0184605_101667671	3300018027	Groundwater Sediment	MHAVEDDDDARSLASLASKVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETAR
Ga0184619_102711382	3300018061	Groundwater Sediment	AVEDDDARSLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFETARPDQISR
Ga0184618_102721482	3300018071	Groundwater Sediment	MDTVEDDDEARNLASLASQVLGIRRPQAERLAERYVRELPGSDWERFLRWISDGSRR
Ga0066662_118235192	3300018468	Grasslands Soil	MHAAEDADEARYLASLASQVLGIRRPQAERLAERYVRELPGSRWERFLRWISDGARR
Ga0193705_10043793	3300019869	Soil	MDAVEDDDARYLAGLASQVLGIQRSQAERLAAAYVRELPGSGWERFLRWIETARPDQISP
Ga0193747_10073081	3300019885	Soil	VEDDDDARSLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR
Ga0193730_11554682	3300020002	Soil	MHAVEDDDDARYLANLASQVLGIQRSQAERLAEAYIRELPGSGWERFL
Ga0193755_12222301	3300020004	Soil	MHAVEDDDDARSLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIS
Ga0206350_112999592	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MHLVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR
Ga0210382_100205823	3300021080	Groundwater Sediment	MHAVEDDDARSLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFETARPDQISR
Ga0193719_100279042	3300021344	Soil	MHAVEDDDNARSLASLASQVLGIQRSQAERLAEAYIRELPGSGWERFLRWIETARPDQIS
Ga0193694_10019972	3300021415	Soil	LHVVEDDDARYLASLASQVLGIQRSQAERLAEAFVRELPGSGWQRFLGWIETARPDQISR
Ga0193695_11006831	3300021418	Soil	VVEDDDARYLASLASQVLGIQRSQAERLAEAFVRELPGSGWQRFLGWIETARPDQISR
Ga0222625_16159661	3300022195	Groundwater Sediment	MHAVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIGR
Ga0222622_102279661	3300022756	Groundwater Sediment	MHVVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIGR
Ga0207642_111146361	3300025899	Miscanthus Rhizosphere	VHAVEDDDARSLASLASQILGIQRPQAERLAEAYVRENPGSGWERFLRWIETAPPIRSARETAR
Ga0207709_103884642	3300025935	Miscanthus Rhizosphere	MHAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIS
Ga0209686_11501771	3300026315	Soil	EDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGARR
Ga0209803_13052541	3300026332	Soil	DDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGARR
Ga0209807_12551262	3300026530	Soil	MHAAEDDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGARR
Ga0209157_10831111	3300026537	Soil	MDTIEDDDEARYLASLASQILGIRRPQAERLAERFVRELPGSDWERFLRWIS
Ga0209805_12880491	3300026542	Soil	MHAAEEDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGARR
Ga0209689_10531302	3300027748	Soil	MHAAEDDDEARYLASLASQVLGIRRPQAERLAERYVRELHGSGWERFLRWISDGARR
Ga0209689_12738802	3300027748	Soil	MHAAEDDDEARYLASLASQVLGIRRPQAERLAERYVRELPGSGWERFLRWISDGSRR
Ga0209811_101465661	3300027821	Surface Soil	MHAVEDDDARYLASLASQVLGIQRAQAERLAEAYVRELPGSGWERFLRWIETARPDQIDR
Ga0307291_10259682	3300028707	Soil	IGSWMHVVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIGR
Ga0307322_100449561	3300028710	Soil	DDDARYLANLASQVLGIQRSQAERLAEAYIRELPGSGWERFLRWIETARPDQISR
Ga0307307_100325641	3300028718	Soil	LHVVEDDDARYLASLASQVLGIQRSQAERLAEAFVRELPGSGWQRFLGWI
Ga0307297_102443801	3300028754	Soil	MHVVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWI
Ga0307280_100314222	3300028768	Soil	LHVIEDDDARYLASLASQVLGIQRSQAERLAEAFVRELPGSGWQRFLGWIETARPDQISR
Ga0307282_101501092	3300028784	Soil	MPKVRTDDDDARYLADLASQVLGIRRSHAEQLAERYVRELPGSGWERFLRWIADDPRR
Ga0307305_105555481	3300028807	Soil	MHAVEDDDDARSLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISRDER
Ga0307294_100270912	3300028810	Soil	EDDDDARYLANLASQVLGIQRSKAERLAEAYIRELPGSGWERFLRWIETARPDQISR
Ga0307292_100532732	3300028811	Soil	MHVVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR
Ga0247825_104693211	3300028812	Soil	MGVVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGLGWERFLRWIETARPDQINR
Ga0307296_100124073	3300028819	Soil	VIEDDDARYLASLASQVLGIQRSQAERLAEAFVRELPGSGWQRFLGWIETARPDQISR
Ga0307296_102547991	3300028819	Soil	MPKVRTDDDDARYLADLASQVLGIRRSHAEQLAERYVRELPGSGWQRFLRWIADDPRR
Ga0307310_101089851	3300028824	Soil	TADRFRAVAADRRRNVVEDGDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR
Ga0307312_101480632	3300028828	Soil	KVRTDDDNARYLADLASQVLGIRRSHAEQLAERYVRELPGSGWQRFLRWIADDPRR
Ga0307312_102577481	3300028828	Soil	MPKVRTDDDDARYLADLASQVLGIRRSHAEQLAERYVRELPGSGWQRFLRW
Ga0307286_102031362	3300028876	Soil	WMHVVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIG
Ga0307300_102467241	3300028880	Soil	LHVVEDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIGR
Ga0247826_111493842	3300030336	Soil	DARYLASLASQVLGIQRSQAERLAEAYVRELPGLGWERFLRWIETARPDQINR
Ga0308205_10358161	3300030830	Soil	MHAVEDDDDARYLANLASQVLGIQRSQAERLAEAYIRELPGPGWERFLRWIETARPDQIS
Ga0308205_10492731	3300030830	Soil	MHAVEDDDDARYLANLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIN
Ga0307497_100496481	3300031226	Soil	MQAIEDDDDARSLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQIN
Ga0307468_1020778882	3300031740	Hardwood Forest Soil	EDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARPDQISR
Ga0307472_1006042212	3300032205	Hardwood Forest Soil	MHAVEDDDDARYLASLASQVLGIQRSQAERLAEAYVRELPGSGWERFLRWIETARADQIS

Hidden Markov Model


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