Metagenome / Metatranscriptome Family F091413

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091413
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	74 residues
Representative Sequence	MVTKIGIALALAAFLAVPSASFAASKAKSSSRDVTKCEGGACTAVNPDRDPNTSLKSQYYRSTHKKHKIQPKT
Number of Associated Samples	69
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.98 %
% of genes near scaffold ends (potentially truncated)	19.63 %
% of genes from short scaffolds (< 2000 bps)	85.05 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.879 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (42.991 % of family members)
Environment Ontology (ENVO)	Unclassified (38.318 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.336 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.69% β-sheet: 7.92% Coil/Unstructured: 61.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF14247	DUF4344	8.41
PF01436	NHL	3.74
PF12071	DUF3551	2.80
PF01734	Patatin	1.87
PF12536	DUF3734	1.87
PF03401	TctC	0.93
PF13581	HATPase_c_2	0.93
PF13586	DDE_Tnp_1_2	0.93
PF04392	ABC_sub_bind	0.93
PF01979	Amidohydro_1	0.93
PF01300	Sua5_yciO_yrdC	0.93
PF05977	MFS_3	0.93
PF12833	HTH_18	0.93
PF17170	DUF5128	0.93
PF08797	HIRAN	0.93
PF03979	Sigma70_r1_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.87
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.87
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.87
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.93
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.93
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.93
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
All Organisms	root	All Organisms	41.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
cellular organisms	root	All Organisms → cellular organisms	41.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.63 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.28 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.67 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.48 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
unclassified Xanthobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.48 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100466766	Not Available	1140	Open in IMG/M
3300002907\|JGI25613J43889_10018508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1955	Open in IMG/M
3300002910\|JGI25615J43890_1032121	Not Available	867	Open in IMG/M
3300002914\|JGI25617J43924_10237368	Not Available	613	Open in IMG/M
3300002917\|JGI25616J43925_10060001	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300002917\|JGI25616J43925_10253005	Not Available	661	Open in IMG/M
3300005332\|Ga0066388_100553891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1779	Open in IMG/M
3300005332\|Ga0066388_100728991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1594	Open in IMG/M
3300005332\|Ga0066388_100987885	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300005332\|Ga0066388_108279460	Not Available	519	Open in IMG/M
3300005764\|Ga0066903_100767303	All Organisms → cellular organisms → Bacteria → Acidobacteria	1716	Open in IMG/M
3300005764\|Ga0066903_101190956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1414	Open in IMG/M
3300005764\|Ga0066903_104068160	Not Available	783	Open in IMG/M
3300007255\|Ga0099791_10004687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5617	Open in IMG/M
3300007258\|Ga0099793_10113966	Not Available	1259	Open in IMG/M
3300007265\|Ga0099794_10037097	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300007788\|Ga0099795_10117807	Not Available	1059	Open in IMG/M
3300009038\|Ga0099829_11417895	Not Available	574	Open in IMG/M
3300009088\|Ga0099830_11317207	Not Available	600	Open in IMG/M
3300009089\|Ga0099828_10487664	Not Available	1111	Open in IMG/M
3300009143\|Ga0099792_10034387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2373	Open in IMG/M
3300009143\|Ga0099792_10199973	Not Available	1136	Open in IMG/M
3300009792\|Ga0126374_10511910	Not Available	868	Open in IMG/M
3300009792\|Ga0126374_10673445	Not Available	774	Open in IMG/M
3300010046\|Ga0126384_11351441	Not Available	663	Open in IMG/M
3300010046\|Ga0126384_11801391	Not Available	581	Open in IMG/M
3300010159\|Ga0099796_10209391	Not Available	794	Open in IMG/M
3300010358\|Ga0126370_10175704	All Organisms → cellular organisms → Bacteria → Acidobacteria	1591	Open in IMG/M
3300010358\|Ga0126370_10806634	Not Available	837	Open in IMG/M
3300010359\|Ga0126376_10573866	Not Available	1061	Open in IMG/M
3300010359\|Ga0126376_11656223	Not Available	674	Open in IMG/M
3300010360\|Ga0126372_10221468	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300010360\|Ga0126372_11502840	Not Available	709	Open in IMG/M
3300010360\|Ga0126372_11864357	Not Available	646	Open in IMG/M
3300010362\|Ga0126377_12715399	Not Available	570	Open in IMG/M
3300010366\|Ga0126379_13095006	Not Available	557	Open in IMG/M
3300011120\|Ga0150983_13420029	Not Available	862	Open in IMG/M
3300011120\|Ga0150983_15861349	Not Available	558	Open in IMG/M
3300011269\|Ga0137392_10059198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2910	Open in IMG/M
3300011269\|Ga0137392_10141952	Not Available	1932	Open in IMG/M
3300011269\|Ga0137392_11016398	Not Available	681	Open in IMG/M
3300011271\|Ga0137393_10291005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1390	Open in IMG/M
3300012202\|Ga0137363_10204258	Not Available	1586	Open in IMG/M
3300012202\|Ga0137363_10591785	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300012202\|Ga0137363_10699073	Not Available	858	Open in IMG/M
3300012205\|Ga0137362_11460243	Not Available	570	Open in IMG/M
3300012361\|Ga0137360_10005653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7676	Open in IMG/M
3300012361\|Ga0137360_10273801	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300012362\|Ga0137361_10669245	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300012683\|Ga0137398_10979464	Not Available	587	Open in IMG/M
3300012683\|Ga0137398_11128177	Not Available	539	Open in IMG/M
3300012917\|Ga0137395_10115951	All Organisms → cellular organisms → Bacteria → Proteobacteria	1797	Open in IMG/M
3300012917\|Ga0137395_10249244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1247	Open in IMG/M
3300012917\|Ga0137395_11225605	Not Available	523	Open in IMG/M
3300012923\|Ga0137359_11655781	Not Available	527	Open in IMG/M
3300012924\|Ga0137413_10869238	Not Available	698	Open in IMG/M
3300012925\|Ga0137419_10075929	All Organisms → cellular organisms → Bacteria → Proteobacteria	2256	Open in IMG/M
3300012925\|Ga0137419_11542052	Not Available	564	Open in IMG/M
3300012927\|Ga0137416_10322562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1287	Open in IMG/M
3300012927\|Ga0137416_10513141	Not Available	1034	Open in IMG/M
3300012927\|Ga0137416_11264153	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012927\|Ga0137416_12138236	Not Available	514	Open in IMG/M
3300012971\|Ga0126369_10919076	Not Available	961	Open in IMG/M
3300012971\|Ga0126369_12066638	Not Available	657	Open in IMG/M
3300012971\|Ga0126369_12461232	Not Available	606	Open in IMG/M
3300015241\|Ga0137418_10018090	All Organisms → cellular organisms → Bacteria → Proteobacteria	6511	Open in IMG/M
3300015242\|Ga0137412_10043791	All Organisms → cellular organisms → Bacteria → Proteobacteria	3653	Open in IMG/M
3300015242\|Ga0137412_10685673	Not Available	764	Open in IMG/M
3300015245\|Ga0137409_10025392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5792	Open in IMG/M
3300017932\|Ga0187814_10408629	Not Available	529	Open in IMG/M
3300017955\|Ga0187817_11100786	Not Available	510	Open in IMG/M
3300017970\|Ga0187783_10028696	All Organisms → cellular organisms → Bacteria	4123	Open in IMG/M
3300017970\|Ga0187783_10123114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1911	Open in IMG/M
3300017970\|Ga0187783_11249640	Not Available	535	Open in IMG/M
3300017975\|Ga0187782_10952788	Not Available	666	Open in IMG/M
3300020199\|Ga0179592_10384760	Not Available	614	Open in IMG/M
3300020580\|Ga0210403_10820387	Not Available	738	Open in IMG/M
3300020581\|Ga0210399_10813016	Not Available	763	Open in IMG/M
3300021086\|Ga0179596_10009417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3136	Open in IMG/M
3300021086\|Ga0179596_10066081	Not Available	1553	Open in IMG/M
3300021086\|Ga0179596_10239330	Not Available	893	Open in IMG/M
3300021088\|Ga0210404_10645934	Not Available	602	Open in IMG/M
3300021170\|Ga0210400_10310604	Not Available	1295	Open in IMG/M
3300021178\|Ga0210408_10155291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1813	Open in IMG/M
3300021476\|Ga0187846_10027877	All Organisms → cellular organisms → Bacteria → Proteobacteria	2579	Open in IMG/M
3300026285\|Ga0209438_1060920	Not Available	1242	Open in IMG/M
3300026304\|Ga0209240_1023994	All Organisms → cellular organisms → Bacteria → Proteobacteria	2334	Open in IMG/M
3300026304\|Ga0209240_1034494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1925	Open in IMG/M
3300026304\|Ga0209240_1130106	Not Available	841	Open in IMG/M
3300026320\|Ga0209131_1004645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8999	Open in IMG/M
3300026341\|Ga0257151_1004060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1488	Open in IMG/M
3300026355\|Ga0257149_1000898	All Organisms → cellular organisms → Bacteria	2686	Open in IMG/M
3300026355\|Ga0257149_1002287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2063	Open in IMG/M
3300026481\|Ga0257155_1011263	Not Available	1201	Open in IMG/M
3300026490\|Ga0257153_1043452	Not Available	924	Open in IMG/M
3300026507\|Ga0257165_1013411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1316	Open in IMG/M
3300026515\|Ga0257158_1025080	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300026551\|Ga0209648_10405793	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300027635\|Ga0209625_1069903	Not Available	785	Open in IMG/M
3300027875\|Ga0209283_10611498	Not Available	690	Open in IMG/M
3300027903\|Ga0209488_10240558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1358	Open in IMG/M
3300027903\|Ga0209488_10745358	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300028047\|Ga0209526_10147156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1650	Open in IMG/M
3300028047\|Ga0209526_10157889	All Organisms → cellular organisms → Bacteria → Proteobacteria	1587	Open in IMG/M
3300028536\|Ga0137415_10500856	Not Available	1023	Open in IMG/M
3300030939\|Ga0138303_1480505	Not Available	603	Open in IMG/M
3300032205\|Ga0307472_102032127	Not Available	576	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.13%
Aquatic	Environmental → Aquatic	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.20%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Cave	Environmental → Terrestrial → Cave	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.31%
Loam	Environmental → Terrestrial → Soil → Loam	12.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.87%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	57.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.87%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	42.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030939	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1004667661	3300002245	Forest Soil	MVTKIAVAVALAAFLAVPSASFAASKAKNSSRDVTKNSYTDVTKCEGGGCTAVNPDRDPNTSLHSQHYRSTHKKHKTQPKS*
JGI25613J43889_100185081	3300002907	Grasslands Soil	MITKVGVALALAAFLAVPSASYAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSRHQYYRSTHKKHKAQPKS*
JGI25615J43890_10321211	3300002910	Grasslands Soil	MVTKIGIALALAAFLAIPSVSLAASKAKHDSSRDVTKCEGGACTAVNPDRDPNTSTKSQYYRRSHKKQKSEPKS*
JGI25617J43924_102373682	3300002914	Grasslands Soil	MRKISVAAAVALAAIVAIPSASFAASKTKDSSRDVTECEGGGCTAVNPDRDPNTSLRSQHYRSTHKKHKIQPKN*
JGI25616J43925_100600012	3300002917	Grasslands Soil	MVTKIAVAVALAAFLAVPSASFAASKAKNSHSDLTECKGGGCTARNPDRDPNTSVNSQYYRRHHKAHKTPSKN*
JGI25616J43925_102530052	3300002917	Grasslands Soil	MVTKIAIAVAIAAFLAVPSASFAASKDKKSSRDVTKCEGGACTAVNPDRDPNTSSKSQYYRSTHKKHKIQPKN*
Ga0066388_1005538911	3300005332	Tropical Forest Soil	MRKISVVAAVALAAIVAVPSASFAASKTKDSSSDVTKCQGGACTAVNPDRDPNTSRNSQYYRRTHKKHKTEPKS*
Ga0066388_1007289911	3300005332	Tropical Forest Soil	MVRKIGVAAAVALVAFLAAPNPSFAASKTKSSSRSDVTKCEGGGCTAVNPDRDPNTSSRHQYYRSTHKK
Ga0066388_1009878852	3300005332	Tropical Forest Soil	MVTKIGIVGIALALAAFLAVPSASFAASKEKKSYSDQTKCEGGGCTAVNPDRDPNTSSKHQYYRSTHKKHKAQPKS*
Ga0066388_1082794601	3300005332	Tropical Forest Soil	KGGMTMVTKIAVAVALAAFLAVPSASFAASKAKNSSSDLTKCQGGGCTAANPDRDPNTSLRSQFYRSTHKKHKIQSKN*
Ga0066903_1007673032	3300005764	Tropical Forest Soil	MITKVGIALALAAFLAVPSASFAASKKDSSRDVTKCEGGACTAVNPDRDPNTSRNSQQFYKRSHKKHKSEPKS*
Ga0066903_1011909562	3300005764	Tropical Forest Soil	MASKVTVAVAIALAAIVTVPSASFAASKAKDSRRDVTKCEGGACTAVNPDRDFINTSREAQYYRRTHKKHKTQPKN*
Ga0066903_1040681601	3300005764	Tropical Forest Soil	MVKTGVAAAVALAAFLVVPNASFAASKAKSSFSDQTQCQGGACTAVNPDRDPNTSVRSQRFRRDTHKVHKVQSKN*
Ga0099791_100046876	3300007255	Vadose Zone Soil	MIMVTKIGIALALAAFLALPSASFAQSKTKSSSRDVTKCEGGACTAVNPDRDPNTSSKHQYFRSTHKKHKTQSKG*
Ga0099793_101139662	3300007258	Vadose Zone Soil	MVTKVGIALALAAFLAAPNASFAASKAKNSHSDLTQCQGGGCTAKNPDRDPNTSVNSQYYRRTHKTHKIQRKN*
Ga0099794_100370973	3300007265	Vadose Zone Soil	MVTKIGIALALAAFLALPSASFAQSKTKSSSRDVTKCEGGACTAVNPDRDPNTSSKHQYFRSTHKKHKTQSKG*
Ga0099795_101178071	3300007788	Vadose Zone Soil	MVTKIAVAAGLAAFLAVPSASLAASKVKNSSGDLTKCEGGACTARNPDRDPNTSVRSQNYRSSHKKHKAQPKS*
Ga0099829_114178951	3300009038	Vadose Zone Soil	MIMVTKIGIALALAAFLAVPSASFAASKTKNSSRDVTKCEGGACTAVNPDRDPNTSSKHQYYRSTHKKHKAQPKS*
Ga0099830_113172071	3300009088	Vadose Zone Soil	MIMVTKIGIALALAAFLAVPSASFAASKTKNSSRDVTKCEGGACTAVNPDRDPNTSSKHQYYRSTHKKHKAEPKS*
Ga0099828_104876642	3300009089	Vadose Zone Soil	MIRKIGVAAAVALVAFLAAPNASFAQSKTKNSSRDVTKCEGGACTAVNPDRDPNTSSRHQYYRSTHKKLKTQPKK*
Ga0099792_100343871	3300009143	Vadose Zone Soil	MVTKIAVAAGLAAFLAVPSASLAASKVKNSSGDLTKCEGGACTARNPDRDPNTSVRSQNYRSSHKKHKAQPKT*
Ga0099792_101999732	3300009143	Vadose Zone Soil	MSMVTKVGIALALAAFLAVPSAFAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSKHQYYRSTHKKPKAQPKS*
Ga0126374_105119101	3300009792	Tropical Forest Soil	MIMVTKVAVAFALAAFLAVPSASFAASKAKNSLRDVTKCEGGACTAVNPDRDPNTSGKSQYYRRTHKKHKAEPKS*
Ga0126374_106734451	3300009792	Tropical Forest Soil	MLPKLKGGMTMIAKVGIALALAAFLAVPSASFAASKKDSSKDVTKCEGGACTAANPDRDPNTSRNSQYYRRSHKKHKSEPKS*
Ga0126384_113514411	3300010046	Tropical Forest Soil	ALALAAFLAVPSASFAASKKDSSRDVTKCEGGACTAVNPDRDPNTSRNSQHFYKRSHKKHKTEPKS*
Ga0126384_118013911	3300010046	Tropical Forest Soil	MLPKLKGGMTMIAKVGIALALAAFLAVPSASFAASKKESSRDVTKCEGGACTAVNPDRDPNTSRNSQYYRRSHKKHKSEPKS*
Ga0099796_102093911	3300010159	Vadose Zone Soil	MITKVGVALALAAFLAVPSASYAASKAKSSYSDQTKCEGGACKAVNPDRDPNTSSRHQYYRSTHKKHKAQPKS*
Ga0126370_101757042	3300010358	Tropical Forest Soil	MITKVGIALALAAFLAVPGASFAASKKDSSRDVTKCEGGACTAVNPDRDPNTSRNSQYYRRSHKKHKSEPKS*
Ga0126370_108066341	3300010358	Tropical Forest Soil	MVRKIGVAAAVALAAFLVVPNASFAASKAKSSFSDQTQCQGGACTAVNPDRDPNTSVRSQRFRRDTHKTHKVQSKN*
Ga0126376_105738661	3300010359	Tropical Forest Soil	MVTKIAVAVALAAFLAVPSASFAASKAKNTHSDLTKCEGGACTARNPDRDPNTSVNSQHFRSTHKKHKTQPKN*
Ga0126376_116562231	3300010359	Tropical Forest Soil	MITKIGVAVALAALLALPSASFAASKKDTAKDVTKCEGGACTAVNPDRDPNTSSKHQYFRNTHKKHKAQSKS*
Ga0126372_102214681	3300010360	Tropical Forest Soil	KVGIALALAAFLAVPSASFAASKKDSSRDVTKCEGGACTAVNPDRDPNTSRNSQYYRRSHKKHKSEPKS*
Ga0126372_115028401	3300010360	Tropical Forest Soil	SFAASKKDSSRDVTKCEGGACTAVNPDRDPNTSLRSQQFYKRSHKKHKTEPKS*
Ga0126372_118643571	3300010360	Tropical Forest Soil	MRKISVVAAVALAAIVAVPSASFAASKTKDASDVTKCHGGACTAVNPDRDPNTSRNSQYYRRTHKKHKTEPKS
Ga0126377_127153991	3300010362	Tropical Forest Soil	MGGMTMITKVGIALALAAFLAVPSASFAASKKDSSRDVTKCEGGACTAVNPDRDPNTSRNSQHFYKRSHKKHKSEPKS*
Ga0126379_130950062	3300010366	Tropical Forest Soil	VMLPKLKGGMTMITKVGIALALAAFLAVPSASFAASKAKDSRRDVTKCEGGACTAVNPDRDFINTSREAQYYRRTHKKHKTQPKN*
Ga0150983_134200292	3300011120	Forest Soil	MVTKIAIAVAIAAFLAIPSASFAASKDKKSSRDVTKCEGGACTAVNPDRDPNTSVNSQHYRSSHKKHKTQPKS*
Ga0150983_158613491	3300011120	Forest Soil	QSCPTLQGGMTMVTKIAVAVALVAFLAVPSASFAASKTKASSRADVTKCEGGGCTAVNPDRDPDTSLRSQHYRSTHKKHKIQPKN*
Ga0137392_100591983	3300011269	Vadose Zone Soil	MVTKVGIALALAAFLAVPSAFAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSKHQYYRSTHKKPKAQPKS*
Ga0137392_101419523	3300011269	Vadose Zone Soil	MVTKIGIALALAAFLAVPSASFAASKAKGSSRDVTKCEGGACTAVNPDRDPNTSLKSQYYRSTHKKHKIQPKT*
Ga0137392_110163981	3300011269	Vadose Zone Soil	MIMVTKVGIALALAAFLAVPSASFAASKEKKSYGDQTKCEGGACTAVNPDRDPNTSSKHQYFRSTHKKHKAQPKS*
Ga0137393_102910053	3300011271	Vadose Zone Soil	MVTKIGIALALAAFLAVPSASFAASKDKKSSRDVTKCEGGACTAVNPDRDPNTSSKSQYYRSTHKKHKIQPKT*
Ga0137363_102042585	3300012202	Vadose Zone Soil	MVRKIGVAAAVALVAFLAAPNASFAASKTKDSSKDVTKCEGGACTAVNPDRDPNTSSKSQYYRST
Ga0137363_105917852	3300012202	Vadose Zone Soil	MIMVTKIGIALALAAFLAVPSASFAASKEKKSYSDQTKCEGGACTAANPDRDPNTSSKHQFYRSTHKKHKAQPKS*
Ga0137363_106990731	3300012202	Vadose Zone Soil	MIMVTKVGVALALVAFLAVPSASYAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSRHQYYRSTHKKHK
Ga0137362_114602432	3300012205	Vadose Zone Soil	MSMVTKVGIALALAALLAVPSAFAASKEKKPYSDQSKCEGGACTAVNPDRDPNTSSKHQYFRST
Ga0137360_100056537	3300012361	Vadose Zone Soil	MVTKIGIALALAAFLAVPSASFAASKEKKSYSDQTKCEGGACTAANPDRDPNTSSKHQFYRSTHKKHKAQPKS*
Ga0137360_102738012	3300012361	Vadose Zone Soil	MVTKVGIALALAAFLAVPSASFAASKTKNSSKSDVTKCEGGACTAVNPDRDPNTSSRHQYYRSTHKKPKTQPKS*
Ga0137361_106692452	3300012362	Vadose Zone Soil	MSMVTKVGIALALAALLAVPSAFAASKEKKPYSDQSKCEGGACTAVNPDRDPNTSSKHQYFRSTHKKPKTQPKS*
Ga0137398_109794642	3300012683	Vadose Zone Soil	MVTKIAVAVALAGFLAVPSASFAASKAKNSHSDLTQCQGGGCTAKNPDRDPNTSVNSQYYRRTHKTHKI
Ga0137398_111281771	3300012683	Vadose Zone Soil	MTMVTKIGIALALAAFLAVPSASFAASKEKKSYGDQTKCEGGACTAVNPDRDPNTSSKHQYFRSTHKKHKTQSKS*
Ga0137395_101159512	3300012917	Vadose Zone Soil	MVTKVGVALALVAFLAVPSASYAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSRHQYYRSTHKKHKAQPKS*
Ga0137395_102492441	3300012917	Vadose Zone Soil	MVTKIGIALALAAFLAVPSASFAASKAKSSSRDVTKCEGGACTAVNPDRDPNTSLKSQYYRSTHKKHKIQPKT*
Ga0137395_112256051	3300012917	Vadose Zone Soil	MIRKIGVAAAVALVAFLAAPNASFAQSKTKNSSRVDPRDVTKCEGGACTAVNPDRDPNTSSRHQFYRSTHKKLKTQPKN*
Ga0137359_116557811	3300012923	Vadose Zone Soil	MFATGQYCPALKGGMIMVTKVGIALALAAFLAAPSASFAASKAKNSHSDLTQCQGGGCTAKNPDRDPNTSVNSQYYRRTHKTHKVQSKN*
Ga0137413_108692382	3300012924	Vadose Zone Soil	MVTKIAVAAGLAAFLAVPSASLAASKVKNSSGDLTKCEGGACTAVNPDRDPNTSSKSQYYRSTHKKHKIQPKN*
Ga0137419_100759292	3300012925	Vadose Zone Soil	MIMVTKIGIALALAAFLAVPSASFAASKTKKDVTKCEGGACTAVNPDRDPNTSTKSQYYRRSHKKHKIESKS*
Ga0137419_115420521	3300012925	Vadose Zone Soil	MVTKIAVAVALAAFLAVPSASFAASKAKNSHSDLTQCQGGGCTAKNPDRDPNTSVNSQYYRR
Ga0137416_103225622	3300012927	Vadose Zone Soil	VTKIAVAVALAGFLAVPSASFAAAKAKNSHSDLTQCQGGGCTAKNPDRDPNTSVNSQYYRRTHKTHKIQPKN*
Ga0137416_105131412	3300012927	Vadose Zone Soil	MIMVTKVGIALALAAFLAVPSAFAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSKHQYYRSTHKKPKAQPKS*
Ga0137416_112641532	3300012927	Vadose Zone Soil	MIMVTKIGIALALAAFLALPSASFAQSKTKSSSRDVTKCEGGACTAVNPDRDPNTSSKHQYF
Ga0137416_121382361	3300012927	Vadose Zone Soil	MIMVTKVGIALALAAFLAVPSASFAASKEKKSYGDQTKCEGGACTAVNPDRDPNTSSKHQYFRSTHKKHKTQSKS*
Ga0126369_109190761	3300012971	Tropical Forest Soil	MTMITKVGIALALAAFLAVPSASFAASKKDSSRDVTKCEGGACTAVNPDRDPNTSRNSQHFYKRSHKKHKTEPKS*
Ga0126369_120666381	3300012971	Tropical Forest Soil	MVRKIGVAAAVALAAFLVVPNASFAASKAKSSFSDQTQCQGGACTAVNPDRDPNTSVRSQRFRRDTHKVHKVQSKN*
Ga0126369_124612322	3300012971	Tropical Forest Soil	MVTKIAVAAALAAFLAVPSASFAASKAKNSSSDLTQCQGGGCTARNPDRDPNTSRNSQYYRRTHKKHKTEPKS*
Ga0137418_100180903	3300015241	Vadose Zone Soil	MIMVTKVGIALALAAFLAVPSASFAASKEKKSYGDQTKCEGGACTAVNPDRDPNTSSKHQYYRSTHKKPKTQPKS*
Ga0137412_100437913	3300015242	Vadose Zone Soil	MTMVTKIGIALALAAFLAVPSASFAASKEKKSYGDQTKCEGGACTAVNPDRDPNTSSKHQYYRSTHKKPKAQPKS*
Ga0137412_106856731	3300015242	Vadose Zone Soil	MVTKIAVAAGLAAFLAVPSASLAASKVKNSSGDLTKCEGGACTARNPDRDPNTSVRSQNYRSSH
Ga0137409_100253922	3300015245	Vadose Zone Soil	MIMVTKIGIALALAAFLALPSASFAQSKTKSSSRDVTKCEGGACTAVNPDRDPNTSSKHQYFRSTHKQHKTQSKG*
Ga0187814_104086291	3300017932	Freshwater Sediment	MNINVKGQSCPTLKGGMTMVRKIGVAAAVALVAFLAAPNASFAASKTKNSYRDQTKCEGGACTAANPDRDPTTSQRSQFYRS
Ga0187817_111007861	3300017955	Freshwater Sediment	MVRKIGVAAAVALVAFLAAPNASFAASKTKNSYRDQTKCEGGGCTAANPDRDPLTSQRSQFYRSTHKKHKAEPKN
Ga0187783_100286969	3300017970	Tropical Peatland	MVSKIAIAVALAAFLAVPSASFAASKAKNSSSDVTKCQGGGCTAANPDRDPNTSLRSQYYRSTHKKHKIQSKN
Ga0187783_101231141	3300017970	Tropical Peatland	MVTKIAVAAALVAFLAVPSASFAAKVKNSPSDVTKCEGGGCTAANPDRDPNTSVRSQNLYRRAHKKHTSHSKS
Ga0187783_112496401	3300017970	Tropical Peatland	MVTKIAVAVALAAFLAVPTASFAASKTKNSSSDATQCQGGGCTAVNPDRDPNTSVRSQNLFRRAHKKHTSHSKS
Ga0187782_109527882	3300017975	Tropical Peatland	MVTKIAVAVALAAFLAVPTASFAASKTKNSSSDATQCQGGGCTAVNPDRDPNTSVNSQSYYRRAHKKHTSPSKN
Ga0179592_103847602	3300020199	Vadose Zone Soil	MVTKIGIALALAAFLALPSASFAQSKTKSSSRDVTKCEGGACTAVNPDRDPNTSSKHQYFRSTHKKHKTQSKG
Ga0210403_108203872	3300020580	Soil	MVTKIAIAVAIAAFLAIPSASFAASKDKKSSRDVTKCEGGACTAVNPDRDPNTSVNSQHYRSSHKKHKTQPKS
Ga0210399_108130161	3300020581	Soil	MASKISVAAAIALAAIVAIPGASYAASKNKNSSRTDVTKCEGGACTAVNPDRDPNTSSKSQYFRRTHKKHSQPKS
Ga0179596_100094175	3300021086	Vadose Zone Soil	MVTKIAVAAGLAAFLAVPSASLAASKVKNSSGDLTKCEGGACTARNPDRDPNTSVRSQNYRSSHKKHKAQPKS
Ga0179596_100660812	3300021086	Vadose Zone Soil	MVTKVGVALALVAFLAVPSASYAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSRHQYYRSTHKKHKAQPKS
Ga0179596_102393302	3300021086	Vadose Zone Soil	MVTKVGIALALAAFLAVPSAFAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSKHQYYRSTHKKPKAQPKS
Ga0210404_106459341	3300021088	Soil	MVTKIAVAVALAAFLAVPSASFAASKAKNSSRDVTKNSYTDVTKCEGGGCTAVNPDRDPNTSLRSQHYRSTHKKHKTQPKS
Ga0210400_103106042	3300021170	Soil	MVTKIGVALALAAFLAVPSASFAASKTKNSSSDVTKCEGGACTAVNPDRDPNTSSKSQYYRRSHKKHKSQ
Ga0210408_101552913	3300021178	Soil	MVTKIAVAVALVAFLAVPSASFAASKTKASSRADVTKCEGGGCPAVNPDRDPDTSLRSQHYRSTHKKHKIQPKN
Ga0187846_100278772	3300021476	Biofilm	MITKVGIALALAAFLALPSASFAASKAKSSSRDLTKCEGGACTAVNPDRDPNTSVKSQSYYKRSHKKQKSEPKS
Ga0209438_10609203	3300026285	Grasslands Soil	MVTKIAIAVAIAAFLAVPSASFAASKDKKSSRDVTKCEGGACTAVNPDRDPNTSSKSQYYRSTHKKHKIQPKN
Ga0209240_10239942	3300026304	Grasslands Soil	MVTKIGIALALAAFLAIPSVSLAASKAKHDSSRDVTKCEGGACTAVNPDRDPNTSTKSQYYRRSHKKQKSEPKS
Ga0209240_10344941	3300026304	Grasslands Soil	MRKISVAAAVALAAIVAIPSASFAASKTKDSSRDVTECEGGGCTAVNPDRDPNTSLRSQHYRSTHKKHKIQPKN
Ga0209240_11301061	3300026304	Grasslands Soil	MVTKIAVAVALAGFLAVPSASFAASKAKNSHSDLTQCQGGGCTAKNPDRDPNTSVNSQYYRRTHKTHKIQPKN
Ga0209131_10046451	3300026320	Grasslands Soil	MITKVGVALALAAFLAVPSASYAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSRHQYYRSTHKKHKAQPKS
Ga0257151_10040601	3300026341	Soil	MVTKIAVAVALAAFLAVPSASFAASKAKNSSRDVTKNSYTDVTKCEGGGCTAVNPDRDPNTSLHSQHYRSTHKKHKTQPKN
Ga0257149_10008982	3300026355	Soil	MVTKIGIALALAAFLAVPSASFAASKEKKSYGDQTKCEGGACTAVNPDRDPNTSSKHQYFRSTHKKHKAQPKS
Ga0257149_10022873	3300026355	Soil	MVTKIGIALALAAFLAVPSASFAASKAKSSSRDVTKCEGGACTAVNPDRDPNTSLKSQYYRSTHKKHKIQPKT
Ga0257155_10112632	3300026481	Soil	MIRKIGVAAAVALVAILAAPNASFAQSKTKNSSRDVTKCEGGACTAVNPDRDPNTSSKSQYYRSTHKKHKTQRKN
Ga0257153_10434522	3300026490	Soil	GGMTMVTKIAVAAGLAAFLAVPSASLAASKVKNSSGDLTKCEGGACTARNPDRDPNTSVRSQNYRSSHKKHKAQPKS
Ga0257165_10134111	3300026507	Soil	MVTKIAVAAGLAAFLAVPSASLAASKVKNSSGDLTKCEGGACTARNPDRDPNTSVRSQNYRSSHK
Ga0257158_10250802	3300026515	Soil	MVTKIGIALALAAFLAVPSASFAASKEKKSYGDQTKCEGGACTAVNPDRDPNTSSKHQYFRSTHKKHKTQSKS
Ga0209648_104057931	3300026551	Grasslands Soil	MVTKIGIALALAAFLAVPSASFAASKTKGSSRDVTKCEGGACTAVNPDRDPNTSTKSQYYRRSHKKQKTEPKS
Ga0209625_10699031	3300027635	Forest Soil	MVTKIAVAVALAAFLAVPSASFAASKAKNSPRDVTKNSYTDVTKCEGGGCTAVNPDRDPNTSLRSQHYRSTHKKHKTQPKS
Ga0209283_106114981	3300027875	Vadose Zone Soil	MIRKIGVAAAVALVAFLAAPNASFAQSKAKNSARDVTKCEGGACTAVNPDRDPNTSGRHQYYRTTHKKHKTQPKN
Ga0209488_102405582	3300027903	Vadose Zone Soil	MIRKIGVAAAVALVAFLAAPNASFAQSKTKNSSRDVTKCEGGACTAVNPDRDPNTSSRHQYYRSTHKKLKTQPKK
Ga0209488_107453581	3300027903	Vadose Zone Soil	MITKVGVALALAAFLAVPSASYAASKAKSSYSDQTKCEGGACTAVNPDRDPNTSSRHQYYRSTHKK
Ga0209526_101471561	3300028047	Forest Soil	MVTKIAVAVALAAFLAVPSASFAASKAKNSSRDVTKNSYTDVTKCEGGGCTAVNPDRDPNTSLHSQHYRSTHKKHKTQPKS
Ga0209526_101578891	3300028047	Forest Soil	MVTKIAVAVALVAFLAVPSASFAASKTKASSRADVTKCEGGGCTAVNPDRDPDTSLRSQHYRSTHKKHKIQPKN
Ga0137415_105008562	3300028536	Vadose Zone Soil	MVTKIGIALAIAAFLAVPSASFAASKAKNSSSDVTKCEGGACTAVNPDRDPNTSTKSQYYRRSHKKHKIEPKS
Ga0138303_14805051	3300030939	Soil	EEMIMLPKMGIALALAAFLAVPSASLAASKAKRDRDVTKCEGGACTAVNPDRDPNTSLHSQHYRSTHKKHKTQPKS
Ga0307472_1020321271	3300032205	Hardwood Forest Soil	MVTKVGIALALAAFLAVPNAFAASKAKNSYSDQTKCEGGACTAANPDRDPNTSSKHQYYRSTHKKPKAQPKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091413

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences