Metagenome / Metatranscriptome Family F091465

Basic Information
Family ID	F091465
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	88 residues
Representative Sequence	GIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPS
Number of Associated Samples	94
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	10.28 %
% of genes from short scaffolds (< 2000 bps)	8.41 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Most Common Taxonomy
Group	Unclassified (89.720 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.234 % of family members)
Environment Ontology (ENVO)	Unclassified (47.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.421 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.22% β-sheet: 38.26% Coil/Unstructured: 56.52%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00144	Beta-lactamase	88.79
PF00303	Thymidylat_synt	4.67
PF00850	Hist_deacetyl	1.87
PF00186	DHFR_1	0.93
PF16177	ACAS_N	0.93
PF10589	NADH_4Fe-4S	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	88.79
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	88.79
COG2367	Beta-lactamase class A	Defense mechanisms [V]	88.79
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	4.67
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.74
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.93

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.72 %
All Organisms	root	All Organisms	10.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.72 %
cellular organisms	root	All Organisms → cellular organisms	10.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.72 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	5.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.61 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005518\|Ga0070699_100020170	All Organisms → cellular organisms → Bacteria	5745	Open in IMG/M
3300006034\|Ga0066656_10733354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	634	Open in IMG/M
3300011987\|Ga0120164_1036075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	744	Open in IMG/M
3300012003\|Ga0120163_1116653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	575	Open in IMG/M
3300012096\|Ga0137389_10694901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	874	Open in IMG/M
3300014052\|Ga0120109_1009670	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300014166\|Ga0134079_10120495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1026	Open in IMG/M
3300017656\|Ga0134112_10114594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1020	Open in IMG/M
3300017657\|Ga0134074_1252276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300026332\|Ga0209803_1185695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	780	Open in IMG/M
3300026550\|Ga0209474_10591634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.26%
Host-Associated	Host-Associated	3.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.85%
Aquatic	Environmental → Aquatic	7.48%
Plants	Host-Associated → Plants	3.74%
Unclassified	Environmental → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.85%
Sediment	Environmental → Aquatic → Sediment	7.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.74%
Unclassified	Environmental → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.48%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.80%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	40.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.87%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.54%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_02121590	2124908016		GTAKAATQFITVNASADVVGGPVGDKFTLKVTKLAADPLPPVLVDALKGLVDSNTADISGTVPFLVKQVAFRNGCFWVSGVTPN
A1565W1_109432742	3300001536	Permafrost	SATDGVTLSDAKIRIDAAGIHGTAKAATQFITVNASADVVGGSVGDKFTLKVSRLAADPLPPALVDAVKGLVDSSTADISGSVPFLVKQVAFRNGCFWVSGVTPN*
JGI12053J15887_106430842	3300001661	Forest Soil	ATQFITLTASADVVGGSVGDKFTLKVSHLAAXPLPPGLLDAVKGIVDSTTADVSGAVPFLVRQVAFRNGCFWVSGVTPN*
JGI25384J37096_100595761	3300002561	Grasslands Soil	IDGGGIHWTAKAATQFITVNASADVIGGPVGDKFTMRVSRLSADPLPPGLLDAVRGLADTSTGAISGTIPFLVKQVSFRNGCLFVSGVTPP*
JGI25382J37095_102170221	3300002562	Grasslands Soil	GIHWTAKAATQFITVNASADVIGGPVGDKFTMRVSRLSADPLPPGLLDAVRGLADTSTGAISGTIPFLVKQVSFRNGCLFVSGVTPP*
JGI25382J43887_100402671	3300002908	Grasslands Soil	IDGGGIHGSAKAATQFITVNTSADVIGGPVGDKFTLRVSRLRADPLPPGLLDAVRGLADTSTGAFSSTIPFLVKQVSFRNGCFSVSGVTPP*
JGI25386J43895_101390622	3300002912	Grasslands Soil	GDKFTMRVSRLSADPLPPGLLDAVRGLADTSTGAISGTIPFLVKQVSFRNGCLFVSGVTPP*
Ga0066674_101882712	3300005166	Soil	HGTAKAATQFLTVTASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADVSGSVPFLVKQVAFRNGCFWVSGVTAN*
Ga0066679_106767182	3300005176	Soil	VNATADVVGGSVGDKFKLKVSRLAADPLPPALMDAVKGLVDSTTADISGAVPFVVKQVAFRNGCFWVSGVTAN*
Ga0066685_103149352	3300005180	Soil	FLTVTASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADVSGSVPFLVKQVAFRNGCFWVSGVTAN*
Ga0066685_106587192	3300005180	Soil	VVGGSVGNKFTLRVSHLAADPLPPVLMDAFKGLVDATTADVSGAVPFLVKQVAFRNGCFWVSGVTPN*
Ga0066678_107839102	3300005181	Soil	GIHGTAKAATQFITLNASADVIGGPVGDKITLRVSRLEADPLPAGLLDAVRGLADTSTGAFSSTIPFLVKQVSFRNGCFFVSGVTPP*
Ga0066671_107852731	3300005184	Soil	QFVTVNASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPS*
Ga0066676_101286272	3300005186	Soil	GTAKAATQFITVNASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGSVPFVVKQVAFRNGCFWVSGVTAN*
Ga0070690_1013545102	3300005330	Switchgrass Rhizosphere	NQNAPSATQGVTLSDAKITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVTRLAADPLPPALVDALKGLVDTNTADISGDVPFLVKQVAFRNGCFWVSGVTPN*
Ga0070705_1009662872	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVTRLAADPLPPALVDALKGLVDTNTADISGNVPFLVKQVAFRNGCFWVSGVTPN*
Ga0066686_100529051	3300005446	Soil	LITVTASADVVGGSVGNKFTLKVSHLAADPLPAGLIDTFKGLVDATTADVSGAVPFLVRQVAFRNGCFWVSGVTSN*
Ga0066682_103037482	3300005450	Soil	VGDKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN*
Ga0066681_103176402	3300005451	Soil	TASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADVSGSVPFLVKQVAFRNGCFWVSGVTAN*
Ga0066687_100045271	3300005454	Soil	GIHGTAKAATQFLTVTASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGSVPFLVKQVAFRNGCFWVSGVTAN*
Ga0070707_1011190031	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TLNATADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGAVPFLVRQVAFRNGCFWVSGVTAN*
Ga0070699_1000201701	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ASADVVGGSVGDKFTVKVSHLAADPLPPGLIDAVKGIVDTSTADISGSVPFAVKQVAFRNGCFWVSGVTAN*
Ga0070697_1001201301	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	SQAVNQGGTSAQGLTLTDTKITIDAGGIHGTAKAATQFITLNATADVVGGPVGNKFTLKVSHLAADPLPPVLLDAFKGLVEATTADVSGAVPFLVKQVAFRNGCFWVSGVTPN*
Ga0070696_1012136711	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QGVTLSDAKITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVTRLAADPLPPALVDALKGLVDTNTADISGDVPFLVKQVAFRNGCFWVSGVTPN*
Ga0066704_100274571	3300005557	Soil	IDGGGIHWTAKAATQFITVNASADVIGGPVGDKFTMRVSRLSADPLPPGLLDVVRGLADTSTGAISGTIPFLVKQVSFRNGCLFVSGVTPP*
Ga0066698_100695523	3300005558	Soil	ITLNASADVVGGGVGDKLTLKVSRLAADPLPPGLLDGVKGLVDSTTADLSGSVPFLVKQVAFRNGCFWVSGVTPN*
Ga0066654_105763202	3300005587	Soil	DGGGIHGTAKAATQFLTVTASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGSVPFLVKQVAFRNGCFWVSGVTAN*
Ga0066706_109014951	3300005598	Soil	GGPVGDKFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN*
Ga0066706_109188541	3300005598	Soil	NKNAPSATQGVTLSEAKIRIDGGGIHGTAKAATQFITVNASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGSVPFVVKQVAFRNGCFWVSGVTAN*
Ga0066656_105894102	3300006034	Soil	GIHGTAKAATQFLTVTASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADVSGSVPFLVKQVAFRNGCFWVSGVTAN*
Ga0066656_107333542	3300006034	Soil	FTEAELNQAAKQSTPSAQGVTLSDTKITIDSGGIHGTAKAATQFITLNASADVVGGGVGDKLTLKVSRLAADPLPPGLLDGVKGLVDSTTADLSGSVPFLVKQVAFRNGCFWVSGVTPN*
Ga0075426_115448872	3300006903	Populus Rhizosphere	VVNKSAPSATQGVTLSDAKIRIDASGIHGTAKAATQFITVNATADVVGGSVGDKFTVKVSHLAADPLPPGLIDAVKGIVDTSTADISGSVPFAVKQVAFRNGCFWVSGVTAN*
Ga0066710_1034877271	3300009012	Grasslands Soil	AKAATQFITVNASADVVGGPVGDKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0105240_127468942	3300009093	Corn Rhizosphere	TLSDTKIRIDSGGIHGTAKAATQFITVDASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAVKGLVDTSTADISGSVPFLVKQVAFRNGCFWVSGVTPN*
Ga0134086_102457132	3300010323	Grasslands Soil	SATQGVTLSDAKIRIDGGGIHGTAKAATQFLTVTASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADVSGSVPFLVKQVAFRNGCFWVSGVTAN*
Ga0134111_100662062	3300010329	Grasslands Soil	VVGGGVGDKLTLKVSRLAADPLPPGLLDGVKGLVDSTTADLSGSVPFLVKQVAFRNGCFWVSGVTPN*
Ga0134125_128767292	3300010371	Terrestrial Soil	IHGTAKAATQFITVNASADVVGGPVGDKFTLKVTRLAADPLPPALVDALKGLVDTNTADISGDVPFLVKQVAFRNGCFWVSGVTPN*
Ga0120164_10360752	3300011987	Permafrost	ETELNEAVNQNAPSATDGVTLSDAKIRIDAAGIHGTAKAATQFITVNASADVVGGSVGDKFTLKVSRLAAAPLPPALVDAVKGLVDSSTADISGSVPFLVKQVAFRNGCFWVSGVTPN*
Ga0120163_11166531	3300012003	Permafrost	LNQAVNQNAPSATKGVTLSDAKITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVTHLAADPLPPPFVDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN*
Ga0137389_106949011	3300012096	Vadose Zone Soil	QVVNHNAPSGGQAVTLSDAKIRIDGGGIHGTAKAATQFITLNAAADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGAVPFLVKQVAFRNGCFWVSGVTAN*
Ga0137381_104886292	3300012207	Vadose Zone Soil	FIVVNASADVVGGPVGGKFTLKVSHLVADPLPPGLLDAVRGMVDSSTADISGTLPFLVKQVAFRNGCFWVSGVTPN*
Ga0137376_115940122	3300012208	Vadose Zone Soil	DVVGGSVGNKFTLKVSHLAADPLPPGLIDAFKGLVDATTADVSGAVPFLVKQVAFRNGCFWVSGVTPN*
Ga0137378_111696501	3300012210	Vadose Zone Soil	KFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPS*
Ga0137377_107395622	3300012211	Vadose Zone Soil	TLSDAKITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN*
Ga0137370_106489721	3300012285	Vadose Zone Soil	SRLAADPLPPGLIDAMKGLVDSTTADISGTVPFLVKQVAFRNGCFWVSGVTPN*
Ga0137387_103645702	3300012349	Vadose Zone Soil	HGTAKAATQLITVTANADVVGGSVGNKFTLKVSHLAADPLPPGLIDAFKGLVDATTADVSGAVPFLVKQVAFRNGCFWVSGVTPN*
Ga0137385_105000321	3300012359	Vadose Zone Soil	VVGGPVGDNFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPS*
Ga0137361_115972801	3300012362	Vadose Zone Soil	IDGGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLAADPLPPGLTDAMKGLVDSTTADISGTVPFLVKQVAFRNGCFWVSGVTPN*
Ga0137396_102991162	3300012918	Vadose Zone Soil	GGPVGGKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVRQVAFRNGCFWVSGVTPN*
Ga0137396_104528131	3300012918	Vadose Zone Soil	VVGGSVGNKFTLKVSHLAADPLPPGLIDAVRGLVDSTTADISGAVPFLVKQVAFRNGCFWVSGVTPN*
Ga0137396_105140291	3300012918	Vadose Zone Soil	VGNKFTLKVSRLAADPLPPGLVDAFRGLIESTTSDISGTVPFLVKQVAFRNGCFWVSGVTPS*
Ga0137419_115800491	3300012925	Vadose Zone Soil	TQFITVTASADVVGGSVGDKFTLKVSHLAADPLPPGLVDAVKGIFDSTTADVSGAVPFLVRQVAFRNGCFWVSGVTPN*
Ga0164299_109072182	3300012958	Soil	ITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVTRLAADPLPPALVDALKGLVDTNTADISGDVPFLVKQVAFRNGCFWVSGVTPN*
Ga0134076_101987531	3300012976	Grasslands Soil	KITIDSGGIHGTAKAATQLITLTASADVVGGSVGNKFTLRVSHLAADPLPPVLMDAFKGLVDATTADVSGAVPFLVKQVAFRNGCFWVSGVTPN*
Ga0157373_110624551	3300013100	Corn Rhizosphere	PSATQGVTLSDAKITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVTRLAADPLPPALVDALKGLVDTNTADISGDVPFLVKQVAFRNGCFWVSGVTPN*
Ga0120150_10017281	3300013294	Permafrost	DDAVNKNAPSPTQGVTLSDAKITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN*
Ga0120179_11405332	3300013763	Permafrost	QFITVNASADVVGGPVGDKFTLKVSRLVADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN*
Ga0120109_10096703	3300014052	Permafrost	ELNEAVNQNAPSATDGVTLSDAKIRIDAAGIHGTAKAATQFITVNASADVVGGSVGDKFTLKVSRLAADPLPPALVDAVKGLVDSSTADISGSVPFLVKQVAFRNGCFWVSGVTPN*
Ga0120125_11104502	3300014056	Permafrost	VTLSDAKIRIDAAGIHGTAKAATQFITVNASADVVGGSVGDKFTLKVSRLAADPLPPALVDAVKGLVDSSTADISGSVPFLVKQVAFRNGCFWVSGVTPN*
Ga0134079_101204952	3300014166	Grasslands Soil	ELNQVVNKNAPSATQGVTLSEAKIRIDGGGIHGTAKAATQFLTVTASADVVGGSVADKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADVSGSVPFLVKQVAFRNGCFWVSGVTAN*
Ga0134079_101417032	3300014166	Grasslands Soil	VNATADVVGGPVGDKFTLKVSRLAADPLPPGLIDAMKRLVDSSTADISGTVPFLVKQVAFRNGCFFISGVTPN*
Ga0134112_101145942	3300017656	Grasslands Soil	IYTEAELNQSIAANAPTTQGVRLNDAKIMIDGGGIHWTAKAATQFITVNASADVIGGPVGDKFTMRVSRLSADPLPPGLLDAVRGLADTSTGAISGTIPFLVKQVSFRNGCFFVSGVTPP
Ga0134074_12522761	3300017657	Grasslands Soil	NQVVNKNAPSATQGVTLSEAKIRIDASGIHGTAKAATQFITVNATADVVGGSVGDKFTLKVSHLAADPLPAVLVDAVKGIADSATADVSGSVPFVVKQVAFRNGCFWVSGVTAN
Ga0134083_106078211	3300017659	Grasslands Soil	QGVTLNDAKIIIDGGGIHWTAKAATQFITVNASADVIGGPVGDKFTMRVSRLSADPLPPGLLDAVRGLADTSTGAISGTIPFLVKQVSFRNGCLFVSGVTPP
Ga0184605_104483782	3300018027	Groundwater Sediment	VGGPVGDKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCLWVSGVTPN
Ga0184605_105148802	3300018027	Groundwater Sediment	VGGPVGDKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISRTVPFLVKQVAFRNGCFWVSGVTPN
Ga0184605_105265072	3300018027	Groundwater Sediment	APSATQGVTLSDTKITIDAGGIHGTATAVTQFITVNASADVVGGPVGDKFTLKVSRLAAEPLPPGLVDAVKGLVGSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0184608_101034011	3300018028	Groundwater Sediment	QSAPSASQGVTLSDTKITIDGGGIHGTAKAATQFITVNASADVVGGSVGDKFTLKVSRLAADPLPPGLIDGLKGLVDSSTSDISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0184621_100677921	3300018054	Groundwater Sediment	KFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0184621_101490772	3300018054	Groundwater Sediment	SVGDKFTLKVSRLAADPLPPGLIDGLKGLVDSSTSDISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0184619_101744371	3300018061	Groundwater Sediment	SQGVTLSDAKITIDGGGIHGTAKAATQFITVNASADVVGGPVGGKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0066667_107674442	3300018433	Grasslands Soil	GVTLNDAKIIIDGGGIHWTAKAATQFITVNASADVIGGPVGDKFTMRVSRLSADPLPPGLLDAVRGLADTSTGAISGTIPFLVKQVSFRNGCLFVSGVTPP
Ga0066667_113022521	3300018433	Grasslands Soil	TADVVGGSVGDKFTLKVSHLAADPLPAVLVDAVKGIADSATADVSGSVPFVVKQVAFRNGCFWVSGVTAN
Ga0066662_110603171	3300018468	Grasslands Soil	ASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGSVPFLVKQVAFRNGCFWVSGVTAN
Ga0066662_111631091	3300018468	Grasslands Soil	KAATQFITVNASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGSVPFVVKQVAFRNGCFWVSGVTAN
Ga0066662_119538461	3300018468	Grasslands Soil	GIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPS
Ga0066669_109333711	3300018482	Grasslands Soil	QNAPSASQGVTLSDTKITIDGGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0222621_11242762	3300021510	Groundwater Sediment	GGGIHGTAKAATQFITVNASADVVGGSVGDKFTLKVSRLAADPLPPGLIDGLKGLVDSSTSDISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0207645_109847482	3300025907	Miscanthus Rhizosphere	HGTAKAATQFITVNASADVVGGPVGDKFTLKVTRLAADPLPPALVDALKGLVDTNTADLSGNVPFLVKQVAFRNGCFWVSGVTPN
Ga0209235_10882931	3300026296	Grasslands Soil	AANAPTAQGVTLNDAKIIIDGGGIHWTAKAATQFITVNASADVIGGPVGDKFTMRVSRLSADPLPPGLLDAVRGLADTSTGAISGTIPFLVKQVSFRNGCLFVSGVTPP
Ga0209236_12978202	3300026298	Grasslands Soil	ITIDGGGIHGTAKAATQFITLNASADVIGGPVGDKITLRVSRLEADPLPPGLLDAVRGLADTSTGAFSSTIPFLVKQVSFRNGCFFVSGVTPP
Ga0209239_10806002	3300026310	Grasslands Soil	NQNAPSASQGVTLSDTKITIDGGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0209761_10899272	3300026313	Grasslands Soil	QFIPVNTTADVIGGPVGDKFTLRVSRLRADPLPPGLLDAVRGLADTSTGAFSSTIPFLVKQVSFRNGCFSVSGVTPP
Ga0209761_11117812	3300026313	Grasslands Soil	GPVGDKFTMRVSRLSADPLPPGLLDAVRGLADTSTGAISGTIPFLVKQVSFRNGCLFVSGVTPP
Ga0209687_10175731	3300026322	Soil	KIRIDGGGIHGTAKAATQFLTVTASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGSVPFLVKQVAFRNGCFWVSGVTAN
Ga0209470_13755792	3300026324	Soil	VKITIDGGGIHGTAKAATQFMTVNASADVVGGPVGDKFTLKVSRLAADPLPPGLTDAMKGLVDSTTADISGTVPFLVKQVAFRNGCFWISGVTPN
Ga0209266_12158801	3300026327	Soil	IHGTAKAATQFITLNASADVVGGGVGDKLTLKVSRLAADPLPPGLLDGVKGLVDSTTADLSGSVPFLVKQVAFRNGCFWVSGVTPN
Ga0209802_10298614	3300026328	Soil	GGGIHGTAKAATQFITVNASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGSVPFVVKQVAFRNGCFWVSGVTAN
Ga0209375_11970222	3300026329	Soil	DVVGGPVGDKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0209803_11856951	3300026332	Soil	NQAVNQNAPSTTQGVTLSDAKITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPS
Ga0257177_10174882	3300026480	Soil	FTLKVSRLVADPLPQGLIDAMKGLVDSSTADLSGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0209058_10525513	3300026536	Soil	ITLNASADVVGGGVGDKLTLKVSRLAADPLPPGLLDGVKGLVDSTTADLSGSVPFLVKQVAFRNGCFWVSGVTPN
Ga0209161_102845022	3300026548	Soil	DAKIRIDGGGIHGTAKAATQFLTVTASADVVGGSVGDKFTLKVSHLAADPLPPGLIDAVKGIVDSTTADISGSVPFLVKQVAFRNGCFWVSGVTAN
Ga0209474_105916341	3300026550	Soil	EAELNEAVNQNAPSATQGVTLSNAKITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFFISGVTPN
Ga0208991_11381562	3300027681	Forest Soil	VDKNAPSATQGVTLSDAKIRIDASGIHGTAKAATQFITVTASADVVGGSVGDKFTLKVSHLAADPLPPGLLDAVKGIVDSTTADVSGAVPFLVRQVAFRNGCFWVSGVTPN
Ga0209180_104514251	3300027846	Vadose Zone Soil	QNAPSATQGVTLSDAKITIDAGGIHGTAKAATQLITVNASADVVGGPVGGKFTLKVSRLVAEPLPQGLIDAMKGLVDSSTADLSGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0209590_102467872	3300027882	Vadose Zone Soil	PSTTQGVTLSDAKITIDAGGIHGTAKAATQFITVNASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPS
Ga0137415_104227121	3300028536	Vadose Zone Soil	ATAVKLNDAKFTIDGGGIHGTGKAATQLLTVSASADVIGGPVAGKFTLRVARLSADPLPPGLVDALRGIVDASTSDISGTIPFLVKQVSFRNGCFSVSGVTPD
Ga0307293_102291112	3300028711	Soil	KFTLRVSHLTADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTAN
Ga0307313_101211611	3300028715	Soil	HGTAKAVTQFITVNASADVVGGPVGDKFTLKVSRLAADPLPPGLIDAVKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTAN
Ga0307298_100406382	3300028717	Soil	GGLHGTAKAVTQFVTVNASADVVAGAVGDKFTLRVSHLTADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0307319_101099841	3300028722	Soil	GVTLSDTKITIDGGGIHGTAKAATQFITVNASADVVGGSVGDKFTLKVSRLAADPLPPGLIDGLKGLVDSSTSDISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0307282_104856132	3300028784	Soil	APSASQGVTLSDAKITIDGGGIHGTAKAATQFITVNASADVVGGPVGGKFTLKVSRLSADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0307312_103009992	3300028828	Soil	VNAVADVIGGPVGGKFTLRVSRLSADPLPPGLVDAIRGIADTSTTDISSGIPFLVKQVSFRNGCFSVSGVTPD
Ga0307304_100515222	3300028885	Soil	AVGDKFTLRVSHLTADPLPPGLIDAMKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0308187_104034471	3300031114	Soil	IHGTAKAATQFITVNASADVVGGSVGDKFTLKVSRLAADPLPPGLIDGLKGLVDSSTADISGTVPFLVKQVAFRNGCFWVSGVTPN
Ga0307470_113723752	3300032174	Hardwood Forest Soil	IDRGGIHGTAKAATQLITVNASADVVGGPVGGKFTLKVSRLVADPLPPALIDAMRGIVDSSTADISGTLPFVVRQVAFRNGCFWVSGVTPN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091465

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign