Metagenome / Metatranscriptome Family F091471

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091471
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	54 residues
Representative Sequence	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWTRALGIALM
Number of Associated Samples	78
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.20 %
% of genes near scaffold ends (potentially truncated)	97.20 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.421 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (45.794 % of family members)
Environment Ontology (ENVO)	Unclassified (43.925 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.664 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 0.00% Coil/Unstructured: 37.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01255	Prenyltransf	5.61
PF07676	PD40	4.67
PF00837	T4_deiodinase	3.74
PF03551	PadR	2.80
PF04191	PEMT	1.87
PF03814	KdpA	1.87
PF04679	DNA_ligase_A_C	1.87
PF02687	FtsX	1.87
PF08240	ADH_N	1.87
PF12704	MacB_PCD	0.93
PF00881	Nitroreductase	0.93
PF07366	SnoaL	0.93
PF00072	Response_reg	0.93
PF13472	Lipase_GDSL_2	0.93
PF01738	DLH	0.93
PF01243	Putative_PNPOx	0.93
PF07610	DUF1573	0.93
PF07045	DUF1330	0.93
PF07238	PilZ	0.93
PF04389	Peptidase_M28	0.93
PF13840	ACT_7	0.93
PF00144	Beta-lactamase	0.93
PF03477	ATP-cone	0.93
PF00484	Pro_CA	0.93
PF13690	CheX	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	5.61
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.80
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.80
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.80
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.87
COG2060	K+-transporting ATPase, KdpA subunit	Inorganic ion transport and metabolism [P]	1.87
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.93
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.93
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.93
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.42 %
Unclassified	root	N/A	34.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.42 %
Unclassified	root	N/A	34.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.42 %
Unclassified	root	N/A	34.58 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.38 %
Unclassified	root	N/A	34.58 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	2.80 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.93 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	2.80 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	2.80 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.93 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.93 %
Pelomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Planctomycetes bacterium SCN 63-9	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	2.80 %
Pelomonas saccharophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas saccharophila	0.93 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.93 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1012884	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300001593\|JGI12635J15846_10346110	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300002245\|JGIcombinedJ26739_101558221	Not Available	557	Open in IMG/M
3300002245\|JGIcombinedJ26739_101560514	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300002914\|JGI25617J43924_10241833	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300002917\|JGI25616J43925_10339495	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300004091\|Ga0062387_100816547	Not Available	696	Open in IMG/M
3300004152\|Ga0062386_101681402	Not Available	529	Open in IMG/M
3300005180\|Ga0066685_10828861	Not Available	624	Open in IMG/M
3300005921\|Ga0070766_11098187	Not Available	549	Open in IMG/M
3300006028\|Ga0070717_11556767	Not Available	599	Open in IMG/M
3300006893\|Ga0073928_11020237	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300007265\|Ga0099794_10183436	Not Available	1068	Open in IMG/M
3300009012\|Ga0066710_100613853	All Organisms → cellular organisms → Bacteria → Acidobacteria	1651	Open in IMG/M
3300009038\|Ga0099829_10069990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2658	Open in IMG/M
3300009038\|Ga0099829_10124902	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300009038\|Ga0099829_10203346	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	1603	Open in IMG/M
3300009038\|Ga0099829_11055563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300009088\|Ga0099830_10112790	All Organisms → cellular organisms → Bacteria	2047	Open in IMG/M
3300009088\|Ga0099830_11061311	Not Available	671	Open in IMG/M
3300009088\|Ga0099830_11416780	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300009089\|Ga0099828_10445057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300009090\|Ga0099827_10730714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300011269\|Ga0137392_10132922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → Pelomonas saccharophila	1996	Open in IMG/M
3300011269\|Ga0137392_10418136	All Organisms → cellular organisms → Bacteria → Acidobacteria	1113	Open in IMG/M
3300011269\|Ga0137392_11291439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300011270\|Ga0137391_10156940	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300011271\|Ga0137393_11154544	Not Available	658	Open in IMG/M
3300012096\|Ga0137389_10058466	Not Available	2939	Open in IMG/M
3300012096\|Ga0137389_11147377	Not Available	666	Open in IMG/M
3300012096\|Ga0137389_11636324	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300012203\|Ga0137399_11805590	Not Available	500	Open in IMG/M
3300012205\|Ga0137362_10294561	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300012205\|Ga0137362_10893350	Not Available	759	Open in IMG/M
3300012206\|Ga0137380_11229033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300012207\|Ga0137381_10990250	Not Available	725	Open in IMG/M
3300012349\|Ga0137387_11028413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300012351\|Ga0137386_10136565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1750	Open in IMG/M
3300012351\|Ga0137386_10251228	All Organisms → cellular organisms → Bacteria → Acidobacteria	1271	Open in IMG/M
3300012361\|Ga0137360_11844033	Not Available	510	Open in IMG/M
3300012362\|Ga0137361_11297692	Not Available	652	Open in IMG/M
3300012363\|Ga0137390_10176027	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	2126	Open in IMG/M
3300012683\|Ga0137398_10707024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300012918\|Ga0137396_10907648	Not Available	645	Open in IMG/M
3300012923\|Ga0137359_10059385	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300012927\|Ga0137416_10189563	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300012927\|Ga0137416_10570531	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300012927\|Ga0137416_11561283	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300012929\|Ga0137404_10984849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300012929\|Ga0137404_11483149	Not Available	627	Open in IMG/M
3300014166\|Ga0134079_10620739	Not Available	540	Open in IMG/M
3300014501\|Ga0182024_10131240	All Organisms → cellular organisms → Bacteria	3561	Open in IMG/M
3300015053\|Ga0137405_1000994	Not Available	924	Open in IMG/M
3300015264\|Ga0137403_10371746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1313	Open in IMG/M
3300016371\|Ga0182034_10802417	Not Available	805	Open in IMG/M
3300018482\|Ga0066669_10655489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300020199\|Ga0179592_10182673	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300020199\|Ga0179592_10388987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300020582\|Ga0210395_10631433	Not Available	803	Open in IMG/M
3300021170\|Ga0210400_10212836	All Organisms → cellular organisms → Bacteria → Acidobacteria	1573	Open in IMG/M
3300021171\|Ga0210405_10084207	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2506	Open in IMG/M
3300021178\|Ga0210408_10952588	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300021401\|Ga0210393_10379937	Not Available	1151	Open in IMG/M
3300021401\|Ga0210393_11121994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	634	Open in IMG/M
3300021405\|Ga0210387_10625190	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300021432\|Ga0210384_11546609	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300021433\|Ga0210391_10191248	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300021433\|Ga0210391_11319628	Not Available	556	Open in IMG/M
3300021478\|Ga0210402_10562126	All Organisms → cellular organisms → Bacteria → Acidobacteria	1058	Open in IMG/M
3300021559\|Ga0210409_11119746	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300021559\|Ga0210409_11165959	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300024232\|Ga0247664_1113285	Not Available	631	Open in IMG/M
3300025915\|Ga0207693_10360945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300026300\|Ga0209027_1236362	Not Available	586	Open in IMG/M
3300026317\|Ga0209154_1056835	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300026340\|Ga0257162_1055703	Not Available	505	Open in IMG/M
3300026515\|Ga0257158_1017957	Not Available	1164	Open in IMG/M
3300026551\|Ga0209648_10107324	All Organisms → cellular organisms → Bacteria	2277	Open in IMG/M
3300026551\|Ga0209648_10219326	Not Available	1435	Open in IMG/M
3300027502\|Ga0209622_1028790	Not Available	987	Open in IMG/M
3300027671\|Ga0209588_1010466	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300027738\|Ga0208989_10209222	Not Available	644	Open in IMG/M
3300027846\|Ga0209180_10085753	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300027862\|Ga0209701_10281636	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300027875\|Ga0209283_10163477	All Organisms → cellular organisms → Bacteria → Acidobacteria	1477	Open in IMG/M
3300027882\|Ga0209590_10334653	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300027882\|Ga0209590_10588779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300027889\|Ga0209380_10567438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300027903\|Ga0209488_10278269	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium SCN 63-9	1252	Open in IMG/M
3300028536\|Ga0137415_10483038	Not Available	1046	Open in IMG/M
3300028673\|Ga0257175_1099221	Not Available	570	Open in IMG/M
3300028673\|Ga0257175_1115607	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300029636\|Ga0222749_10552220	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300029636\|Ga0222749_10568806	Not Available	618	Open in IMG/M
3300031720\|Ga0307469_11214333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300031754\|Ga0307475_10666194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300031820\|Ga0307473_10159342	All Organisms → cellular organisms → Bacteria → Acidobacteria	1294	Open in IMG/M
3300031820\|Ga0307473_10982150	Not Available	615	Open in IMG/M
3300031962\|Ga0307479_11531153	Not Available	623	Open in IMG/M
3300031962\|Ga0307479_11730113	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300032076\|Ga0306924_12146563	Not Available	571	Open in IMG/M
3300032174\|Ga0307470_10428654	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300032180\|Ga0307471_100204430	All Organisms → cellular organisms → Bacteria → Acidobacteria	1980	Open in IMG/M
3300032180\|Ga0307471_100489974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375	Open in IMG/M
3300032180\|Ga0307471_101174013	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300032180\|Ga0307471_101601959	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300032180\|Ga0307471_101690456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	787	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.20%
Aquatic	Environmental → Aquatic	2.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.20%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.92%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.87%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	45.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10128841	3300001084	Forest Soil	MKTLFIALRATLFSTGFIFLWGWVALSLHRRYDTSLGFAFPGWTPALGIALMAAGGTLAFACIATFVS
JGI12635J15846_103461101	3300001593	Forest Soil	MKTLFIALRATLFSTGFIFLWGWVALSLHRRYDTSLGFAFPGWTPALGIALMAA
JGIcombinedJ26739_1015582211	3300002245	Forest Soil	MKTLFIALRAILFSTGFIFLWGWVALSLHRRYDTTLGFAFSGWTPTLGIVLMAAGGTLAFACIATFVTR
JGIcombinedJ26739_1015605142	3300002245	Forest Soil	MKTVFIALRATLFSTGFIFLWGWVALSLHRRYDPSLGFAFPGWTPALGIALMAAGGTLAF
JGI25617J43924_102418332	3300002914	Grasslands Soil	MKTLFIALRAAIFGAGFIYLWGWVALSLHQRYNTTLGFALSGWARTLGIAAMAAGGTLAFACVATFVTRG
JGI25616J43925_103394952	3300002917	Grasslands Soil	MKTLFIALRAAIFGSGFVFLWGWVALGLHHRYDTNLGFALAGWTRA
Ga0062387_1008165472	3300004091	Bog Forest Soil	MKTIFLALRAAVVSTAFVSLWGWVAWNVHSRYDSALGFPLPEWTRGLGIALLAFGGTLA
Ga0062386_1016814021	3300004152	Bog Forest Soil	MKKAFIALRAAIFGAGFVFLWGWVALALHYRYDSGLGIAFFGWARGLGIAAMVAGGILAFACV
Ga0066685_108288611	3300005180	Soil	MKTLFIALRAAIFGAGFIFLWGWVALSLHHRYDTTLGFALTGWTRALGIVLMTAG
Ga0070766_110981871	3300005921	Soil	MKTLFIALRSAVVSAGFILLWGWVALSLHRRYDDT
Ga0070717_115567672	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLFIALRATIFGTGFIFLWVWVALSLHHRYDIASAIALPGWTPPLGIALMTAGGVLAFACVAT
Ga0073928_110202371	3300006893	Iron-Sulfur Acid Spring	MKMLFIALRAILFSAVFIFLWGWVALSLHRRYDTTLGFAFSGRPPALGIALMAAGGTLAFACIATFVTRGE
Ga0099794_101834361	3300007265	Vadose Zone Soil	MKTIFIALRAAIFSAGFIVLWGWVALGLHRRYDAALGFALGGWTRVLGIALMAAGGTLAFACVATFVT
Ga0066710_1006138531	3300009012	Grasslands Soil	MKTLFIALRAAIFGAGFIFLWGWVALSLHHRYDTT
Ga0099829_100699901	3300009038	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWTRALGIA
Ga0099829_101249021	3300009038	Vadose Zone Soil	MKTLFIALRAAIFGSGFILLWGWVALGLHHRYDTSLGFALAG
Ga0099829_102033462	3300009038	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWTRALGIALMVAGG
Ga0099829_110555631	3300009038	Vadose Zone Soil	MKTLFIALRAAIFSSGFILLWGWVALGLHHRYDSTLGFALSGWTRALGMALMAAGGTL
Ga0099830_101127901	3300009088	Vadose Zone Soil	MKTLFIALRAAIFGSGFILLWGWVALGLHNRYDNSLGFALAGWTRALGL
Ga0099830_110613111	3300009088	Vadose Zone Soil	MKTVFLALRAAIFGTGFIFLWGWVALGLHHRYDTALGFSLSGWTRALGIALMAAGGILAFACVAT
Ga0099830_114167802	3300009088	Vadose Zone Soil	MKTLFIALRSAVFGSGFVWLWAWVAWSLHRSYDSTLGFALPEWTRALGIALLAA
Ga0099828_104450571	3300009089	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWTRALGIALM
Ga0099827_107307141	3300009090	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALGLHQRYDTALGFALPGWTRAL
Ga0137392_101329223	3300011269	Vadose Zone Soil	MKTLFNAIRAAIFGAGFIFLWGWVALGVRRRYDETLGFAMAGWTRDLG
Ga0137392_104181361	3300011269	Vadose Zone Soil	MKTFFIALRATIFGAGFILLWGWVALSLHDRYDTTLG
Ga0137392_112914391	3300011269	Vadose Zone Soil	MKTLFIALRAVIFSSGFILLWGWVALGLHHRYDSTLGFALSGWTRALGMALMAAGGTLAFACIAT
Ga0137391_101569404	3300011270	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWTRALGI
Ga0137393_111545441	3300011271	Vadose Zone Soil	MKTFFIAVRAAIFGTGFIFLWGWVALSLHHRYDITLGIALSDWTRTLGIVLMAFGGTLAF
Ga0137389_100584661	3300012096	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALGLHHGYDATLGLALSDWTRVLGVAVMAAGGILAFACVATFVSRG
Ga0137389_111473771	3300012096	Vadose Zone Soil	MKMLFIALRAAIFGAGFVLLWGWVAWSLHRRYDCTLGFALPEWTRAVGIALLAAGGALAFACIMTFVTRGEGTPA
Ga0137389_116363241	3300012096	Vadose Zone Soil	KTFFIAVRAAIFGTGFIFLWGWVALSLHHRYDITLGIALSGWTRTLGIALMASGGTLAFACVTTFVSGGLP*
Ga0137399_118055901	3300012203	Vadose Zone Soil	MRTLFIALRAAIFGTGFIFLWGWVALSLHHRYDISLGIGLSDWTRT
Ga0137362_102945611	3300012205	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWTRA
Ga0137362_108933501	3300012205	Vadose Zone Soil	MKTLFIALRSAIFGAGFIFVWGWVALSLHHRYDVTFGFALYAWTRA
Ga0137380_112290332	3300012206	Vadose Zone Soil	MKTLFIALRAAIFGTGFIYLWGWVALSLHNRYDSTLGFE
Ga0137381_109902502	3300012207	Vadose Zone Soil	MKTILIALRAAMFSSGFILLWGWVALSLHYRYDITLGIALSDWTR
Ga0137387_110284131	3300012349	Vadose Zone Soil	MKTLFIALRATIFGAGFIFLWGWFALTLHHRYNTTLGFALP
Ga0137386_101365651	3300012351	Vadose Zone Soil	MKTLFIALRAAIFGTGFIYLWGWVALSLHNRYDSTLGFELS
Ga0137386_102512281	3300012351	Vadose Zone Soil	VIADFQKGHAMKTLFIAVRAAIFGTGFIFLWGWVALSLHHRYDITLGIVLSDWARALGIA
Ga0137360_118440331	3300012361	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWTRALGIAL
Ga0137361_112976921	3300012362	Vadose Zone Soil	MKTLFIALRTAIFGTGFIFLWGWVALGLHHRYDIILGIALSDWTRVLGIAVMVVGGALA
Ga0137390_101760272	3300012363	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALG
Ga0137398_107070242	3300012683	Vadose Zone Soil	MKTFFIALRATIFGAGFIFLWGWVALSLHDRYDTTLGFALPAWTRLLGITLITAGGILGLACVATFVT
Ga0137396_109076481	3300012918	Vadose Zone Soil	MRTLFIALRAAIFGTGFIFLWGWVALSLHHRYDISLG
Ga0137359_100593852	3300012923	Vadose Zone Soil	MKTLFIALRTAIFGTGFIFLWGWVALGLHHRYDIILGIALSDWTRVLGIAVMVVGGALAFACVATFVTRGEGTPAPLRPAAQIRRRWSL*
Ga0137416_101895631	3300012927	Vadose Zone Soil	MKTLFIALRAAIFGSGFILLWGWVALGLHNRYDTSLGFALAGWTRVLGVALMAAGGTLA
Ga0137416_105705311	3300012927	Vadose Zone Soil	MKTLFIALRAGIFGTGLILLWGWVALSLHHRYDTTLDFALTGWTRVLGIA
Ga0137416_115612831	3300012927	Vadose Zone Soil	MKTLFIALRAAVFSTGLVYLWGWVAWSLHRRYDSTLGFALPEWTRAAGIA
Ga0137404_109848491	3300012929	Vadose Zone Soil	MKTLFIALRATIFGAGFIFLWGWVALSLHDRYNTTLGLALPAWTRILGIALITAGGIIALACVATFVTRGQGT
Ga0137404_114831491	3300012929	Vadose Zone Soil	MKTLFIAVRAAIFGTGFIFLWGWVALSLHHRYDITLGIVLSDWTRA
Ga0134079_106207392	3300014166	Grasslands Soil	MKTLFIAIRATIFGAGFILLWGWVALALHHRYNTTLGF
Ga0182024_101312402	3300014501	Permafrost	MRTLFIVLRAVLFGTGFVFLWGWVARALHCRYDTARGLVLSGW*
Ga0137405_10009942	3300015053	Vadose Zone Soil	VKTSFIALRATIFGTGFILLWGWVALSLHHRYDTTLGFALPGWTRVL
Ga0137403_103717463	3300015264	Vadose Zone Soil	MKTLFIALRATIFGAGFILLWGWVALALHHRYNTTLGFALPAWTRILGIALITAGGI
Ga0182034_108024171	3300016371	Soil	MKMLFIALRAMLFSTGFILLWGWVALSLHRRYDTTLGFAFSGWT
Ga0066669_106554892	3300018482	Grasslands Soil	MKTFFIALRATIFGAGFVLLWGWVALTLHRRYDTTLAFALPAWTRLLGITLITVGGIIAL
Ga0179592_101826732	3300020199	Vadose Zone Soil	MKTLFIALRVAIFGTGFIFLWRWVALSLHHRYDISCVALPNWARTVGIVLMVAGGTLAFACVATFVTHGEG
Ga0179592_103889872	3300020199	Vadose Zone Soil	MKTLFIALRATIFGAGFIFLWGWVALTLHHRYDTTLAFALPAWTR
Ga0210395_106314332	3300020582	Soil	MKTLFTALRAAIFGTGFILLWGWVAVSLRDRYDGVFGTALPG
Ga0210400_102128361	3300021170	Soil	MKTLFIALRAAIFGSGFIFLWGWVALGLHHRYDTSLGFALAGWTRVLGVALMAAGGTLAF
Ga0210405_100842071	3300021171	Soil	MKTLFIALRAILFSTGFIFLWGWVALSLHRRYDTTLGFVFSGWTLPLGIALMAA
Ga0210408_109525882	3300021178	Soil	MKTLFNALRAAIFGAGFIFLWGWVALEVHRRYDDTLGFALAGWTRVLGVGVMA
Ga0210393_103799373	3300021401	Soil	MKTLFIALRAIFFSAAFIFLWGWVALSLHRRYDTTLSFPFSAWTPAMGIALMA
Ga0210393_111219942	3300021401	Soil	MKTLFIALRSILFSTGFVFLWGWVALSLHRRYDTTLS
Ga0210387_106251901	3300021405	Soil	VKTLFIAIRAILFGAGFVFLWGWVALSLHRRYDTTLGFPFSDWTPALGIAVMAVGGILAFACIATFV
Ga0210384_115466092	3300021432	Soil	MKTLFIALRALLFSAGFIFLWGWVALTLHRRYDTTLGFALSGWTPVLGIALMAAGGTLAFACIATFVTGGEGTPAPMDPPR
Ga0210391_101912482	3300021433	Soil	MKTLFIALRAILFSTGFVFLWGWVALSLHRRYDATLSFTFSGWTPALGLALMA
Ga0210391_113196281	3300021433	Soil	MKTLFVALRAAFFSAGFVVVWGWVALSLHRRYDTSLGFALPGWTSALGIALMAAGGTLAFACITTFV
Ga0210402_105621262	3300021478	Soil	MKTLFIALRAILFSAGFIFLWGWVALSLHRRYDTTL
Ga0210409_111197461	3300021559	Soil	MKTLFNALRAAIFGAGFIFLWGWVALEVHRRYDDTLGFALAGWTRVLGIAVMAAGGILAFACVATFVTRGEGTP
Ga0210409_111659591	3300021559	Soil	MKTLFIALRSTIFGTSFVLLWGWVAWSLHLRYDRTLRFALPEW
Ga0247664_11132851	3300024232	Soil	MKTLFITLRSAIFGTGFIFLWGWVALSLRRYDFTLGIALSDWTRALGMALMVVGGT
Ga0207693_103609452	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLFIALRAILFSAGFIFLWGWVALSLHRRYDTTLGFALSGGTPVLGIAMMAAGGTLAF
Ga0209027_12363621	3300026300	Grasslands Soil	MKTLFIALRAAIFGAGFIFLWGWVALSLHHRYDTTL
Ga0209154_10568353	3300026317	Soil	MKTLLIAVRAAIFGTGFILLWGWVALSLHHRYDTILGFALSSGMRALGIVLM
Ga0257162_10557032	3300026340	Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLHHRYNISLGVALPNWAQTLG
Ga0257158_10179571	3300026515	Soil	MKTLFNALRAAIFSTGFIFLWGWIALGLRRRYDDTLEFA
Ga0209648_101073243	3300026551	Grasslands Soil	MKTLFIALRAAIFGSGFILLWGWVALGLHHRYDTSLGFALAGWTRVLGVALMAAGGTLAFACIATFVAR
Ga0209648_102193262	3300026551	Grasslands Soil	MKTLFIALRAAIFGSGFIFLWGWVALGLHNRYDTSLGFA
Ga0209622_10287902	3300027502	Forest Soil	MKTLFIALRAILFSTGFIFLWGWVALSLHRRYDKTLGFVFSGWTLPLGIALMAAGGTLAFACIATFVTRGEGTP
Ga0209588_10104663	3300027671	Vadose Zone Soil	MKTLFIALRAAIFGSGFIFLWGWVALGLHHRYDTSLGFALA
Ga0208989_102092222	3300027738	Forest Soil	MKTLFIALRALLFGAGFIFLWGWVALTLHHRYDSTLGFAFPGWTPALGIVLVTV
Ga0209180_100857531	3300027846	Vadose Zone Soil	MKTLFIALRAAIFGSGFILLWGWVALGLHHRYDTSLGFALAGWTRVLGVALMAAGGT
Ga0209701_102816361	3300027862	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWT
Ga0209283_101634771	3300027875	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWTRALG
Ga0209590_103346531	3300027882	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFALSGWTRALGIALMAAGGTL
Ga0209590_105887791	3300027882	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALGLHQRYDTALGFALP
Ga0209380_105674381	3300027889	Soil	MKTLFIALRAIFFSTGFVFLWGWVALSLHRRYDTTLSFTFSGWTPALGIALMAAGGTLAFACI
Ga0209488_102782692	3300027903	Vadose Zone Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRHRYDTALGFAL
Ga0137415_104830381	3300028536	Vadose Zone Soil	MKTLFIALRAAIFGSGFILLWGWAALGLHHRYDTSLGFALAGW
Ga0257175_10992211	3300028673	Soil	MKTILIALRAAMFGGGFILLWGWVALSLHHRYDIALGIALSDWTRTLGTAVMAAGGILAFACVATFV
Ga0257175_11156072	3300028673	Soil	MKTLFITLRSAVFGASFILLWGWVAWSLHRRYDSTLGFPLPGWTRALGI
Ga0222749_105522202	3300029636	Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLRDRYDSTLVALPGWTRAIGIALMAAGGTLAFACVAT
Ga0222749_105688061	3300029636	Soil	MKTLFIALRAILFSTGFIFLWGWVALSLHRRYDTTLSFTFSGWTPALGIALMAAG
Ga0307469_112143332	3300031720	Hardwood Forest Soil	MKRLFTALRAIIFATGFILLWSWIAVGLHNSYDTELGFELSGWTRALGIVL
Ga0307475_106661941	3300031754	Hardwood Forest Soil	MKMLFIALRAILFSTGFILLWGWVALSLHRRYDTTRGFAFSGWTPALGIA
Ga0307473_101593421	3300031820	Hardwood Forest Soil	MKMLFIALRAILFSAGFIFLWGWVALSLHRRYDTTLGFALSGWTPVLGIALMAAGGTLAF
Ga0307473_109821501	3300031820	Hardwood Forest Soil	MKRLFTALRAIIFATGFILLWGWIAVGLHNSYDTELGFELSGWTRALGIVLMVVGGVLALACVTTFITS
Ga0307479_115311531	3300031962	Hardwood Forest Soil	MKTLFIALRAAIFGTGFIFLWGWVALSLHHRYDISLGVALPNWTRPLGIVLMIAGGTLASACVATFVTRGEGTPAP
Ga0307479_117301132	3300031962	Hardwood Forest Soil	MKTLFIALRAAIFSTGFILLWGWVALSLHNRYDTTLGFALSGWTRTWGIALMAAGGTLAF
Ga0306924_121465631	3300032076	Soil	MKMLFIALRAMLFSTGFILLWGWVALSLHRRYDTT
Ga0307470_104286541	3300032174	Hardwood Forest Soil	MRTLFIALRAAIFGTGFIFLWGWVALSLHHRYDISLGAARPNWTRTLGIVLMVAGGTLASACV
Ga0307471_1002044304	3300032180	Hardwood Forest Soil	MKTLFIALRAAIFGTGFILLWGWIALSLHHRYDATLAF
Ga0307471_1004899743	3300032180	Hardwood Forest Soil	MKTLFIALRAILFSTGFIFLWGWVALSLHRRYDTTLGFVFSGWTLPLGIALMAAGGTL
Ga0307471_1011740131	3300032180	Hardwood Forest Soil	MKMLFIALRAILFSAGFIFLWGWVALSLHRRYDTTLGFALS
Ga0307471_1016019592	3300032180	Hardwood Forest Soil	VKTLFIALRTAIFGTGFIFLWGWVALSLHHRYDITLGSALSDGVRMLGIALMASGGTL
Ga0307471_1016904562	3300032180	Hardwood Forest Soil	MKTLFIALRAAIFGSGFIWLWAWVAWSLHRRYDSSLGFALPEWTHPLGIVVMAAGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences