Metagenome Family F091513

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091513
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	97 residues
Representative Sequence	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCSAVLLIGFAS
Number of Associated Samples	83
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.63 %
% of genes near scaffold ends (potentially truncated)	93.46 %
% of genes from short scaffolds (< 2000 bps)	91.59 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.355 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (14.019 % of family members)
Environment Ontology (ENVO)	Unclassified (57.944 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.439 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.92% β-sheet: 0.00% Coil/Unstructured: 30.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00549	Ligase_CoA	68.22
PF08442	ATP-grasp_2	15.89
PF02566	OsmC	2.80
PF07681	DoxX	2.80
PF13564	DoxX_2	1.87
PF13640	2OG-FeII_Oxy_3	0.93
PF13411	MerR_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0045	Succinyl-CoA synthetase, beta subunit	Energy production and conversion [C]	84.11
COG0074	Succinyl-CoA synthetase, alpha subunit	Energy production and conversion [C]	68.22
COG0458	Carbamoylphosphate synthase large subunit	Amino acid transport and metabolism [E]	31.78
COG0026	Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)	Nucleotide transport and metabolism [F]	15.89
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	15.89
COG1042	Acyl-CoA synthetase (NDP forming)	Energy production and conversion [C]	15.89
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	2.80
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	2.80
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	2.80
COG4270	Uncharacterized membrane protein	Function unknown [S]	2.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.36 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	28.97 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	28.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.82 %
Unclassified	root	N/A	4.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	20.56 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	13.08 %
Unclassified	root	N/A	4.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	20.56 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	13.08 %
Unclassified	root	N/A	4.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	20.56 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	20.56 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.93 %

Name	Rank	Taxonomy	Distribution
Spiralia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.87 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	0.93 %

Name	Rank	Taxonomy	Distribution
Gnathifera	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	1.87 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	0.93 %

Name	Rank	Taxonomy	Distribution
Rotifera	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Eurotatoria	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Bdelloidea	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Rotaria	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Palaeoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Ephemeroptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Furcatergalia	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Scapphodonta	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Ephemeridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Ephemera	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Name	Rank	Taxonomy	Distribution
Rotaria sp. Silwood1	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	18.69 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	13.08 %
Unclassified	root	N/A	4.67 %
Ephemera danica	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica	1.87 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_11238896	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300001464\|JGI12363J15224_100209	All Organisms → cellular organisms → Bacteria	12549	Open in IMG/M
3300004463\|Ga0063356_103158694	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	710	Open in IMG/M
3300005093\|Ga0062594_102629486	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005184\|Ga0066671_10703323	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005289\|Ga0065704_10197204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	1162	Open in IMG/M
3300005290\|Ga0065712_10563900	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005293\|Ga0065715_10076396	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005293\|Ga0065715_10149736	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300005294\|Ga0065705_10028868	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	1362	Open in IMG/M
3300005294\|Ga0065705_10320650	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005328\|Ga0070676_10297614	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005334\|Ga0068869_102127708	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005340\|Ga0070689_100582197	All Organisms → cellular organisms → Eukaryota → Opisthokonta	967	Open in IMG/M
3300005354\|Ga0070675_102178886	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005440\|Ga0070705_100937388	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005459\|Ga0068867_102352823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	507	Open in IMG/M
3300005539\|Ga0068853_101522654	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005547\|Ga0070693_100400262	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300005547\|Ga0070693_100950160	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005615\|Ga0070702_101324769	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005841\|Ga0068863_100444632	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300005841\|Ga0068863_101205496	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005841\|Ga0068863_102039876	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005843\|Ga0068860_100208060	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300005875\|Ga0075293_1044850	All Organisms → cellular organisms → Eukaryota → Opisthokonta	623	Open in IMG/M
3300005937\|Ga0081455_10339913	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1063	Open in IMG/M
3300006852\|Ga0075433_11545837	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300006871\|Ga0075434_100599370	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300006881\|Ga0068865_102105711	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006904\|Ga0075424_101609184	All Organisms → cellular organisms → Eukaryota → Opisthokonta	689	Open in IMG/M
3300006904\|Ga0075424_101911699	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300009011\|Ga0105251_10370590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	655	Open in IMG/M
3300009011\|Ga0105251_10488186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	574	Open in IMG/M
3300009089\|Ga0099828_10409913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1222	Open in IMG/M
3300009098\|Ga0105245_10507345	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	1223	Open in IMG/M
3300009098\|Ga0105245_13227577	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300009100\|Ga0075418_11159586	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	837	Open in IMG/M
3300009101\|Ga0105247_10806054	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	717	Open in IMG/M
3300009101\|Ga0105247_10829869	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	708	Open in IMG/M
3300009101\|Ga0105247_11348508	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	575	Open in IMG/M
3300009148\|Ga0105243_10668673	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	1008	Open in IMG/M
3300009148\|Ga0105243_11193156	All Organisms → cellular organisms → Eukaryota → Opisthokonta	774	Open in IMG/M
3300009156\|Ga0111538_13045686	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300009162\|Ga0075423_12138430	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300009174\|Ga0105241_11595804	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300009177\|Ga0105248_11823742	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	690	Open in IMG/M
3300009551\|Ga0105238_10693741	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	1030	Open in IMG/M
3300009553\|Ga0105249_12174286	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300010036\|Ga0126305_11020830	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010044\|Ga0126310_10684230	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	775	Open in IMG/M
3300010045\|Ga0126311_10154565	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica	1637	Open in IMG/M
3300010362\|Ga0126377_13429862	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300010373\|Ga0134128_13221858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	501	Open in IMG/M
3300010397\|Ga0134124_12147270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	597	Open in IMG/M
3300010399\|Ga0134127_11514125	All Organisms → cellular organisms → Eukaryota → Opisthokonta	744	Open in IMG/M
3300010399\|Ga0134127_11572743	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	731	Open in IMG/M
3300010399\|Ga0134127_12489578	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010400\|Ga0134122_10733995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	933	Open in IMG/M
3300010400\|Ga0134122_10955075	All Organisms → cellular organisms → Eukaryota → Opisthokonta	835	Open in IMG/M
3300010400\|Ga0134122_12116788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	604	Open in IMG/M
3300010401\|Ga0134121_11183203	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300010401\|Ga0134121_11945519	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300011119\|Ga0105246_11302534	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	673	Open in IMG/M
3300012958\|Ga0164299_11268603	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300013297\|Ga0157378_12501542	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300014325\|Ga0163163_13221126	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300014326\|Ga0157380_12944131	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300014968\|Ga0157379_11615723	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300014968\|Ga0157379_12055775	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300015262\|Ga0182007_10392594	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300015371\|Ga0132258_10203050	All Organisms → cellular organisms → Bacteria	4809	Open in IMG/M
3300018476\|Ga0190274_10149787	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300025321\|Ga0207656_10585894	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300025900\|Ga0207710_10284386	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	833	Open in IMG/M
3300025908\|Ga0207643_10317239	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	973	Open in IMG/M
3300025911\|Ga0207654_10536656	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Palaeoptera → Ephemeroptera → Furcatergalia → Scapphodonta → Ephemeridae → Ephemera → Ephemera danica	830	Open in IMG/M
3300025911\|Ga0207654_10574442	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	803	Open in IMG/M
3300025914\|Ga0207671_10852839	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	721	Open in IMG/M
3300025918\|Ga0207662_10039122	All Organisms → cellular organisms → Bacteria	2781	Open in IMG/M
3300025919\|Ga0207657_11280311	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300025920\|Ga0207649_11638245	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300025925\|Ga0207650_10232945	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300025927\|Ga0207687_10573026	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	949	Open in IMG/M
3300025927\|Ga0207687_11829688	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300025934\|Ga0207686_11771135	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300025961\|Ga0207712_11879652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	536	Open in IMG/M
3300026035\|Ga0207703_11555076	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300026035\|Ga0207703_12017354	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300026041\|Ga0207639_11429292	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300026075\|Ga0207708_11533529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	585	Open in IMG/M
3300026088\|Ga0207641_10618053	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	1062	Open in IMG/M
3300026088\|Ga0207641_12459891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	519	Open in IMG/M
3300026095\|Ga0207676_10234473	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1643	Open in IMG/M
3300026095\|Ga0207676_10959948	All Organisms → cellular organisms → Eukaryota → Opisthokonta	841	Open in IMG/M
3300026095\|Ga0207676_12154293	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300026142\|Ga0207698_11663668	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300027875\|Ga0209283_10428702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	859	Open in IMG/M
3300028380\|Ga0268265_11280759	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	733	Open in IMG/M
3300028381\|Ga0268264_10048177	All Organisms → cellular organisms → Bacteria	3544	Open in IMG/M
3300031901\|Ga0307406_10592825	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Bdelloidea → Rotaria → unclassified Rotaria → Rotaria sp. Silwood1	913	Open in IMG/M
3300033412\|Ga0310810_11416537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	69.16%
Environmental	Environmental	30.84%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	69.16%
Terrestrial	Environmental → Terrestrial	30.84%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.25%
Soil	Environmental → Terrestrial → Soil	30.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	28.97%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	33.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	24.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.43%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	33.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	24.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	14.02%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	9.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	8.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001464	Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN91	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_112388961	3300000953	Soil	MNRTILLKWFVRVSRFGLAVLFLFTAIAKLAIVKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIAPRTVRIGA
JGI12363J15224_1002091	3300001464	Soil	MKWIKRVCRFGLVALFLFTAIAKLAIINAFVKNMGELLASSGFDYQRWSWPATIVVIGAEIVTAVLLILPRTVRIGALFAAVLLMGFAGYALYYVY
Ga0063356_1031586941	3300004463	Arabidopsis Thaliana Rhizosphere	MNRTILLKWFVRISRYGLVALFLFTAIAKLAIIKAFVKNMGELLSSSGFDYQRWSWPATIIVIAAEIVTALLLIVPRTVRIGAICAAVLLV
Ga0062594_1026294862	3300005093	Soil	MNRTILLKWFVRVSRYGLVALFLFTAIAKLAIIREFVTKMGELLASSGFNYQRWSWPATIGLIVAEIVTALLLIMPRTVRIGALLAGVLLVGFASYALYYVYA
Ga0066671_107033232	3300005184	Soil	MKWIVRICRYALAALFLFTAVAKLAIVKAFAKNVGELLAASGFNYERWAWPATIVVIVAEIVTAALLIVPRTVRVGALCAAILLIGFASYALYYVY
Ga0065704_101972042	3300005289	Switchgrass Rhizosphere	MAALFLFTAIAKLAILKEFVTKVGELLSSLGFNYQRWSAPATTVVIVAELVTAVLLIVPVTVRAGAVFAAALLMGFAA
Ga0065712_105639002	3300005290	Miscanthus Rhizosphere	MNRTILLKWFVRVSRYGLVALFLFTAIAKLAIIREFVTKMGELLASSGFNYQRWSWPATIGLIVAEIVTALLLLMPRTVRIGALLAGALLVGFASYALYYVYALHGEPLECGCFGGI
Ga0065715_100763962	3300005293	Miscanthus Rhizosphere	MNRTILLKWFVRVSRYGLVALFLFTAIAKLAIIREFVTKMGELLASSGFNYQRWSWPATIGLIVAEIVTALLLIMPRTVRIGALL
Ga0065715_101497361	3300005293	Miscanthus Rhizosphere	MNRTILLKWFVRVSRYGLVALFLFTAIAKLAIIRDFVKNMGELLASSGFDYQRWSWPATIVVIVAEIVTALLLLIPRTVRIGALLAGVLLVGFASYALY
Ga0065705_100288681	3300005294	Switchgrass Rhizosphere	MNRTILFKWFVRVSRYGLVALFLFTAIAKLAIIREFVKNMGELLASSGFDYQRWSWPATIVVIVAEIVTALLLIMPRTVRIGALLAGILLLGFASYALYYVYALHGEPLECG
Ga0065705_103206502	3300005294	Switchgrass Rhizosphere	MNADQRSRAKIWAVRICRYGLAALFLFTAIAKLAIVKTFVKNMGELLSSSGFDYQRWSWPATIVVIGAEIVTALLLILPRTVRVGALLAGVLLTG
Ga0070676_102976142	3300005328	Miscanthus Rhizosphere	MRTDRRLVWIVRVCRYGLAALFLFTAIAKLAIVNAFVKNMGELLASSGFNYERWSWPATIVVIAAEIVTALLLIMPRTVRTGAVLAGVLLLGFAGYALYYVYGLHGEPLEC
Ga0070670_1012380182	3300005331	Switchgrass Rhizosphere	VALFLFTAAAKLAIIKTFVGNMGELLAASGFNYQRWSWPATIVVIAAEIVTALLLLVPRTVRLGALCSAVLLVGFASYALYYVYGLHGEPLECGCFGGIIASQLGVKTALR
Ga0068869_1021277081	3300005334	Miscanthus Rhizosphere	MKTDRYRVWIVRVCRYGLAALFLFTAIAKLAILKEFVTKVGELLSSLGFDYQRWSRPATAAVIVAELVTAVLLIVPVTVRIGAVFAAALLMGFAAFALYYVYGLH
Ga0070689_1005821972	3300005340	Switchgrass Rhizosphere	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIIKAFVKNMGELLSSSGFNYQRWSWPATIAVIVAEFITAILLIAPRTVRIGAL
Ga0070675_1021788862	3300005354	Miscanthus Rhizosphere	MNRTILLKWFVRVSRYGLAALFLFTAIAKLAIVNAFVKNMGELLASSGFDYQRWSWPATIVVIVAEIITALLLILPHTVRIGALLAA
Ga0070705_1009373882	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNRTIAPKWVVRICRFGLAALFLFTAIAKLAIIKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCSGALLIGFASYALYYVYGLHGEP
Ga0068867_1023528232	3300005459	Miscanthus Rhizosphere	MNADQKSRARIWAVRVCRYGLAALFLFTAIAKLAIVNAFVKNMGELLASSGFDYQRWSWPATIVVIGAEIVTAVLLILPRTVRIGALFSAVLLMGFAGYALYYVYGLHGEPLECG
Ga0068853_1015226541	3300005539	Corn Rhizosphere	MNADQKSTARIWVVRICRYGLVALFLFTAIAKLAIVQTFVKNMGELLSSSGFDYQRWSWPATIVVIGAEIVTALLLILPRTVRIGALLAAVLLMGFAGYALYY
Ga0070693_1004002622	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNRTIILKWFVRVCRFGLAALFLLTAIAKLAIIKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLLAPRTVRIGALCSGALLIGFASYALYYVYGLHGEPLEC
Ga0070693_1009501601	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAALFLFTAIAKLAIINAFVKNMGDMLGSSGFDFQRWSWPATIVVIAAEIVTAVLLLVPRTVRVGAICAAVLLVGFASYALYYVY
Ga0070702_1013247691	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNRTTLLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFNYQRWSWPATIAVIVAEFITAILLIA
Ga0068859_1014347581	3300005617	Switchgrass Rhizosphere	VSHRFKQIVIRICRFGLVALFLFTAAAKLAIIKTFVGNMGELLAASGFNYQRWSWPATIVVIAAEIVTALLLLVPRTVRLGALCSAVLLVGFASYALYYVYGLHGEPLECGCFG
Ga0068863_1004446322	3300005841	Switchgrass Rhizosphere	MKTDRYRVWIVRVCRYGLAALFLFTAIAKLAILREFISKVGELLSSLGFDYQRWSWPATAAVIVAELVTAVLLIVPVTVRIGAVFAA
Ga0068863_1012054962	3300005841	Switchgrass Rhizosphere	MNADQKSKARTWIVRVCRYGLAALFLFTAIAKLAIVKTFVKNMGELLSSSGFDYQRWSWPATIVVIAAEIVTALLLIVPRTVRVGAFFSAVLLVGFASYALYYVYGLHGEPLECGCFGGIIASQ
Ga0068863_1020398762	3300005841	Switchgrass Rhizosphere	MNRTTLLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFNYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCS
Ga0068860_1002080603	3300005843	Switchgrass Rhizosphere	MKWLKRICRFGLVALFLFTAIAKLAIIREFVKNMGELLASSGFNYQRWSWPATIVVIVAEIVTALLLIMPRTVRIGALLAGVLLVGFASYALYYVY
Ga0068862_1026638892	3300005844	Switchgrass Rhizosphere	VSQRVKQIIIRICRFGLVALFLFTAAAKLAIIKTFVGNMGELLAASGFNYQRWSWPATIVVIAAEIVTALLLLVPRTVRLGALCSAVLLVGFASYALYYVYGLHGEPLECGCFGGIIASQLG
Ga0075293_10448502	3300005875	Rice Paddy Soil	MNRTILFKWFVRVSRYGLVALFLFTAIAKLAIINAFVKNMGELLASSGLNYQRWSWPATIVVIAAEIVTALLLI
Ga0081455_103399132	3300005937	Tabebuia Heterophylla Rhizosphere	MKWIKRVCRFGLVALFLFTAIAKLAIIQTFVKNMGELLSSSGFDYQRWSWPATIVVIVAEVVTAFLLIVPRTVRIGALFAAVLLIGFASYALCYGYGLHGEPLE
Ga0075433_115458371	3300006852	Populus Rhizosphere	MNRTTLLKWFVRICRFGLAALFLFTAIAKLAIIHAFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIAPRTVRI
Ga0075434_1005993701	3300006871	Populus Rhizosphere	MKTDQRRWVTWIVWICRYGLAALFLFTAVAKLAIVNAFAKNVGELLTSSGFNYRRWSWPVTIVVIVAEIVTALLLIVPRTVRLGALCAAALLMGFAAYA
Ga0068865_1021057111	3300006881	Miscanthus Rhizosphere	LFTAIAKLAILKEFITKVGELLSSLGFDYQRWSWPATAAVIVAELVTAVLLIVPVTVRIGAAFAAVLLTGFAAFALY
Ga0075424_1016091841	3300006904	Populus Rhizosphere	MNRTIILKWFVRVCRFGLAALFLLTAIAKLAIIKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLLAPRTVR
Ga0075424_1019116992	3300006904	Populus Rhizosphere	MEMDQRRSVAWIVWICRYGLAALFLFTAAAKLAILSAFVKNVGELLAASGFNYARWSWPATIVVIVAEIVAAVLLIVPRTVQLGALCAAALLIGFAAYALYYVYALHGEPLECGCFGGIIASQLGVK
Ga0105251_103705902	3300009011	Switchgrass Rhizosphere	MNRTTLLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFNYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCSGVLLLGFASYALYYVYALHGEPLECGCFGGIIASQL
Ga0105251_104881862	3300009011	Switchgrass Rhizosphere	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIIKAFVKNMGELLSSSGFDYVRWSWPATIAVIVAEFITAILLILPRTVRAGALCSAVLLIGFASYALYYVYALHGEPLECGCFGGIIASQL
Ga0099828_104099131	3300009089	Vadose Zone Soil	MIEASDSIKTLDTRAKRLSFLKWLVRMSRFALAALFLFTVGAKLAIVKTFATNVAELLSASGFNYARWMWPTTVAVITAEVITAVLLLLPRTVRIGALVAAALLIGFAGYALYYVYALHGEPLECGCF
Ga0105245_105073452	3300009098	Miscanthus Rhizosphere	MNRTIVPKWVVRICRFGLAALFLLTAIAKLAIIKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCSGALLIGFASYALYYVY
Ga0105245_132275771	3300009098	Miscanthus Rhizosphere	LNTDDTDKSADLIQRTTAKTWVIRICRYGLAALFLFTAIAKLAIINLFVKNMGELLSSSGFNYQRWSWPATIVVILAEIVTAVLLILPRTVRVGASLAAVLLIGFAAYALY
Ga0075418_111595862	3300009100	Populus Rhizosphere	VSHRVKQIIIRICRFGLAALFLFTAAAKLAILKAFVSNMSELLAASGFNYQRWSWPATILVIAAEIVTALLLLVPRTVRLGA
Ga0105247_108060542	3300009101	Switchgrass Rhizosphere	MRTDRRLVWIVLVCRYGLAALFLFTAIAKLAIVKTFVKNMGELLSSSGFDYQRWSWPATIVVIVAEIVTALLLIVPR
Ga0105247_108298692	3300009101	Switchgrass Rhizosphere	MNRTILFKWFVRVSRYGLIALFLFTAIAKLAIIQTFVKNMGELLSSSGFDYQRWSWPATIVVIVAEIVTALLLIVPR
Ga0105247_113485082	3300009101	Switchgrass Rhizosphere	MNRTTLLKWFVRICRFGLAALFLFTAIAKLAIIHAFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIVLRTVRIGALCSGVLLLGFASYALYYVYALHGEPLECGCFGGIIAS
Ga0105243_106686732	3300009148	Miscanthus Rhizosphere	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFNYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALC*
Ga0105243_111931561	3300009148	Miscanthus Rhizosphere	MRTDRRLVWIVRVCRHGLAALFLFTAIAKLAIIKTFVKNMGELLSSSGFDYQRWSWPATIVVIVAEIVTALLLIVPRTVRVGAFLSAVLL
Ga0111538_100861451	3300009156	Populus Rhizosphere	VRISRFGLAALFLFTAIAKLAVIRGFVDNVGQLLTGSGFDSARWSWPATIAVIAVEFLIAILLLVPKTVRIGAVAAAVLLTFFAGYALYYVYGLKGEPLECGCF
Ga0111538_130456862	3300009156	Populus Rhizosphere	MKKWIVRVCRFGLAALFLFTAIAKLAIVSAFVKNMRDLLASSGFDPRWSWPATIVVIVAEVVIAFLLIVPRTVRVG
Ga0075423_121384302	3300009162	Populus Rhizosphere	MKTHRYRVWIVRICRYGLAALFLFTAIAKLAILKEFVTKMGELLSSLGLDYQRWSWPATAAVIVAELVTAVLLIVPITVR
Ga0105241_115958041	3300009174	Corn Rhizosphere	VSHRFKQIIIRICRFGLVALFLFTAAAKLAIIKTFVGNMGELLAASGFNYQRWSWPATIVVIATEIVTALLLLVPRTVRLGALCSAVLLIGF
Ga0105248_118237422	3300009177	Switchgrass Rhizosphere	MKWIKRVCRFGLVALFLFTAIAKLAILNAFVKNMGELLSSSGFDYQRWSWPATIVVIAAEIVTALLLIFPRTVRIGA
Ga0105238_106937411	3300009551	Corn Rhizosphere	MNRTIVPKWVVRICRFGLAALFLLTAIAKLAIIKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLLAPRTVRIGALCSGALLIGFASYALYYVYGLHGEPLE
Ga0105249_121742861	3300009553	Switchgrass Rhizosphere	MNADQKSRARIWAVRVCRYGLAALFLFTAIAKLAIVNAFVKNMGELLASSGFDYQRWSWPATIVVIVAEIITALLLILPHTVRIGALLAAVLLMGFAGYALYYVYGLH
Ga0126305_110208302	3300010036	Serpentine Soil	MNRAILLKWFVRVSRYGLVALFLFTAIAKLAIVKAFVKNMGELLASSGFDYQRWSWPATIVVIVTEIVTALLLIIPRTVRVGAGF
Ga0126310_106842301	3300010044	Serpentine Soil	MNATARIWIVRVCRYGLVALFLFTAIAKVAIINAFVKNMGELLASSGFDYQRWSWPATIVVIVAEIVTAILLIVPRTVRTGALFAAVLLV
Ga0126311_101545652	3300010045	Serpentine Soil	MNRTILLKWFVRVSRYGLVALFLFTAIAKLAIVNAFVKNMGELLASSGINYQRWSWPATIVVIAAEIVTAVLLLAPRTVRI
Ga0126377_134298621	3300010362	Tropical Forest Soil	MKWIVRICRYGLAALFLFTAIAKLAIVKTFASNMGELLSSSGFDYQRWSWPATIVVIGAEVVTAVLLIVPRTVRIGALLAGVL
Ga0134128_132218582	3300010373	Terrestrial Soil	MTRMKWIVRICRYALAALFLFTAIAKLAIVKTFVKNVSELLAASGFNYERWSWPATIVVILAEIVTAALLIVPRTVRVGALCAAVLLIGFAFYALYYVYALHG
Ga0134124_121472701	3300010397	Terrestrial Soil	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIISTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCSAVLLIGFASYALYYVYALHGEPLECGCFGGIIASQL
Ga0134127_115141251	3300010399	Terrestrial Soil	MNRTTLLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFNYQRWSWPATIAVIVAEFVTAILLIAPRTVRTGALCSAVLLVGFASY
Ga0134127_115727431	3300010399	Terrestrial Soil	MKWIKRVCRFGLVALFLFTAIAKLAILNAFVKNMGELLSSSGFDYQRWSWPATIVVIGAEIVTAVLLILPRTVRIRRAQKRRDDLADR
Ga0134127_124895781	3300010399	Terrestrial Soil	MKWIKRICRFGLVALFLFTAIAKLAIIREFVKNMGELLASSGFNYQRWSWPATIVVIAAEIITALLLIMPRTVRIGAL
Ga0134122_107339952	3300010400	Terrestrial Soil	MNRTILFKWFVRVSRYGLIALFLFTAIAKLAIIQTFVKNMGELLSSSGIDYQRWSWPATIVVIVAEIVTALLLILPRTVRIGALFSAVLLVGFASYALYYVYGLHGEPLECGCFGGII
Ga0134122_109550751	3300010400	Terrestrial Soil	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIIKTFVSNMGELLSSSGFNYQRWSWPATIAVIVAEFVTAVLLIAPRTVRIGAICSAVLLIG
Ga0134122_121167882	3300010400	Terrestrial Soil	LVWRLSPQITQIEYGLITRTKTLIWIVRICRYALAALFLFTAIAKLAIIKAFVKNMGELLSSSGFDYQRWSWPATIVVIVAEFITAFLLIVPRTVRIGALCAAVLLIGFAGYALYYVYALHGEPLECGCFGGII
Ga0134121_111832032	3300010401	Terrestrial Soil	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFNYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCSAVLLVGF
Ga0134121_119455192	3300010401	Terrestrial Soil	MNRTILFKWFVRVSRYGLIALFLFTAIAKLAIIQTFVKNMGELLSSSGIDYQRWSWRATIVVIVAEIVTALLLIL
Ga0105246_113025341	3300011119	Miscanthus Rhizosphere	MKWIKRVCRFGLVALFLFTAIAKLAIIQTFVKNMGELLSSSGFNYQRWSWPATIVVIVAEIVTALLLIMPRTVRIGALFSAV
Ga0164299_112686031	3300012958	Soil	LNTDDTDKSADLIQRTTAKTWVIRICRYGLAAMFLFTAIAKLAIINAFVKNMGELLSSSGFDYQRWSWPATIVVILAEIVTAVLLILPRTVRVGASRAAVLLIGFAA
Ga0157378_125015422	3300013297	Miscanthus Rhizosphere	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCSAVLLIGFAS
Ga0163163_132211262	3300014325	Switchgrass Rhizosphere	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIIKAFVKNMGELLSSSGFDYVRWSWPATIAVIVAEFITAILLIVPRTVRAGAL
Ga0157380_129441311	3300014326	Switchgrass Rhizosphere	MKIDRYRVWIVRVCRYGLAALFLFTAIAKLAILKEFVTKVGELLSSLGFDYQRWSRPATAAVIVAELVTAVLLIVPVTVRIGAVFAAALLMGFAAFALYYV
Ga0157379_116157232	3300014968	Switchgrass Rhizosphere	MKTDRYRVWIVRVCRYGLAALFLFTAIAKLAILREFISKVGELLSSLGFDYQRWSWPATAAVIVAELVTAVLLIVPVTVRIGAVFAAVLLTGFAAFALYYVYGLHGEPLECGCFGGIIASQLG
Ga0157379_120557752	3300014968	Switchgrass Rhizosphere	MNRTILLKWFVRVSRYGLAVLFLFTAIAKLAIIRTFVTNMSELLGSSGFDYQRWSWPATIVVIVAEIITALLLILPRTVRIGALLAAVLLMGFAGYAL
Ga0182007_103925941	3300015262	Rhizosphere	MKWIFRVCRFGLAALFLFTAIAKLAIINAFAKNMGELLGSSGFNYQRWSWPATIVVIVAEMVTALFLIMPRTVRLGALCAALLLIGFAAYALYYVYGLDGEPLECGCFG
Ga0132258_102030508	3300015371	Arabidopsis Rhizosphere	MNRTILLKWFVRVSRFGLAVLFLFTAIAKLAIVKTFVKNMGELLSSSGFDYPRWSWPATIAVIVAEFITAILLIAPRTVRIGALFSAVLLIGFASYALYYVY
Ga0190274_101497871	3300018476	Soil	MKWIKRICRFGLVALFLFTAIAKIAIVKEFVKNMGELLASSGFDYQRWSWPATIVVIVAEIVTAVLLLMPRTVRVGAL
Ga0207656_105858942	3300025321	Corn Rhizosphere	MNRTILFKWFVRVCRYGLVALFLFTALAKLAIINAFVKNMGELLASSGFNYERWSWPATIVVIAAEIVTALLLIMPRTVRIGATLAGVLL
Ga0207710_102843862	3300025900	Switchgrass Rhizosphere	MNRTILLKWFVRVSRYGLAVLFLFTAIAKLAIVNAFVKNMGELLASSGFDYQRWSWPATIVVIVAEVVTALLLILPRT
Ga0207643_103172391	3300025908	Miscanthus Rhizosphere	MNRTILLKWFVRVSRYGLVALFLFTAIAKLAIIRDFVKNMGELLASSGFDYQRWSWPATIVVIVAEIVTAVLLLIPRTVRIGALLAGV
Ga0207654_105366562	3300025911	Corn Rhizosphere	MNADQKSRARIWAVRVCRYGLAALFLFTAIAKLAIVNAFVKNMGELLASSGFDYQRWSWPATIVVIVAEIITALLLILPHTVRIGALLAAV
Ga0207654_105744421	3300025911	Corn Rhizosphere	MNRTILLKWIIRICRFGLVALFLFTAIAKLAIVKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEIVTAALLIVPRTVRFGALCAAVLLVGF
Ga0207671_108528391	3300025914	Corn Rhizosphere	MNRTIAPKWAVRICRFGLAALFLFTAIAKLAIIKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIAP
Ga0207662_100391221	3300025918	Switchgrass Rhizosphere	MNADQKSRARIWAVRVCRYGLAALFLFTAIAKLAIVQAFVKNMGELLASSGFDYQRWSWSATIVVIAAEIVTALLLIVPRTVRVGAFF
Ga0207657_112803112	3300025919	Corn Rhizosphere	MKWIKRVCRFGLVALFLFTAIAKLAILNAFVKNMGELLSSSGFDYQRWSWPATIVVIGAEIVTALLLILPRTVRIGALLAAVLLMGFAGYALYYVYGLHG
Ga0207649_116382452	3300025920	Corn Rhizosphere	LIQRTTAKTWVIRICRYGLAALFLFTAIAKLAIINAFAKNMGELLGSSGFNYQRWSWPATIAVIAAEIVTAVLLLVPRTVRVGAIC
Ga0207650_102329452	3300025925	Switchgrass Rhizosphere	MNRTILLKWFVRVSRYGLVALFLFTAIAKLAIINAFVKNIGELLSSSGFDYQRWSWPATIVVIVAEIVTALLLILPRTVRIGALFAAVLL
Ga0207687_105730262	3300025927	Miscanthus Rhizosphere	MNRTIVPKWVVRICRFGLAALFLLTAIAKLAIIKTFVKNMGELLSSSGFDYQRWSWPATIVVILAEIVTAVLLIVPRTVR
Ga0207687_118296881	3300025927	Miscanthus Rhizosphere	MNRTILFKWFVRVCRYGLVALFLFTAIAKLAIIGAFVKNMGELLAASGFNYERWSWPATIVVIAAEIVTALLLIMPR
Ga0207686_117711352	3300025934	Miscanthus Rhizosphere	MNRTILLKWFVRVSRYGLAVLFLFTAIAKLAIVNAFVKNMGELLASSGFDYQRWSWPATIVVIVAEIITALLLILPHTVRIGALLAAVLLMGFA
Ga0207689_105458641	3300025942	Miscanthus Rhizosphere	VSQRVKQIIIRICRFGLVALFLFTAAAKLAIIKTFVGNMGELLAASGFNYQRWSWPATIVVIAAEIVTALLLLVPRTVRLGALCSAVLLVGFASYALYYVYGLHGEPLECG
Ga0207712_118796521	3300025961	Switchgrass Rhizosphere	MNRTILFKWFVRVSRYGLVALFLFTAIAKLAIIREFVKNMGELLASSGFDYQRWSWPATIAVIVAEVITAILLIAPRTVRIGALCSAVLLIGFASYALYYVYGLHGE
Ga0207703_115550762	3300026035	Switchgrass Rhizosphere	MNRTILLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFNYQRWSWPATIAVIISEFITAILLIAPRTVRIGALCSAVLLVGFASYALY
Ga0207703_120173542	3300026035	Switchgrass Rhizosphere	MSRTILFKWFVRVCRYGLIALFLFTALAKLRIINAFVKNMGELLASSGFDYQRWSWPATIVVIAAEIVTALLLIFPRTVRIGALLAGVLLLGFAGYALYYVYGLH
Ga0207639_114292921	3300026041	Corn Rhizosphere	MNADQKSTARIWVVRICRYGLVALFLFTAIAKLAIVQTFVKNMGELLSSSGFDYQRWSWPATIVVIGAEIVTALLLILPRTVRIGALLAAVLLMGFAGYA
Ga0207708_115335291	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MNRTILLKWFVRVSRFGLAALFLFTAIAKLVIINTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCSGVLLVGFASYALYYVYALHGEPLEC
Ga0207641_106180531	3300026088	Switchgrass Rhizosphere	MKTDRYRVWIVRVCRYGLAALFLFTAIAKLAILREFISKVGELLSSLGFDYQRWSWPATAAVIVAELVTAVLLIVPVTVRIGAVFAAVLLTGFAAFALYYVYGLH
Ga0207641_124598911	3300026088	Switchgrass Rhizosphere	MNRTTLLKWFVRVSRFGLAALFLFTAIAKLAIIHTFVKNMGELLSSSGFNYQRWSWPATIAVIVAEFITAILLIAPRTVRIGALCSGVLLLGFASYALYYVYALHGEPLECGCFGG
Ga0207676_102344733	3300026095	Switchgrass Rhizosphere	MNRTILLKWFVRISRYGLAALFLFTAIAKLAIISTFVKNMGELLSSSGFNYQRWSWPATIAVIVAEFVTAILLTAPRTVRIGALCSAVLLV
Ga0207676_109599482	3300026095	Switchgrass Rhizosphere	MNRTILLKWFVRISRFGLAALFLFTAIAKLAIIKTFVSNMGELLSSSGFNYQRWSWPATIAVIIAEFITAILLIAPRTVRIGALCSAVLLIGFASYALYYVYALHGEPLECGCFGG
Ga0207676_121542931	3300026095	Switchgrass Rhizosphere	MNRTILLKWIIRICRFGLVALFLFTAIAKLAIVKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEIVTAALLIVPRTV
Ga0207698_116636682	3300026142	Corn Rhizosphere	MKTDRYRVWIVRVCRYGLAALFLFTAIAKLAILKEFVTKVGELLSSLGFDYQRWSRPATAAVIVAELVTAVLLIVPVTVRIGAVFAAA
Ga0209283_104287022	3300027875	Vadose Zone Soil	MIEASDSIKTLDTRAKRLSFLKWLVRMSRFALAALFLFTVGAKLAIVKTFATNVAELLSASGFNYARWMWPTTVAVITAEVITAVLLLLPRTVRIGALVAAALLIGFAGYALYYVYALHGEPLECG
Ga0268265_112807591	3300028380	Switchgrass Rhizosphere	MNRTILLKWFVRVSRYGLVALFLFTAIAKLAIIRDFVKNMGELLASSGFDYQRWSWPATIVVIVAEIVTALLLLIPRTVRIGALLAGVL
Ga0268264_100481771	3300028381	Switchgrass Rhizosphere	MNRTIVPKWVVRICRFGLAALFLLTAIAKLAIIKTFVKNMGELLSSSGFDYQRWSWPATIAVIVAEFITAILLLAPRTVRIGALC
Ga0307406_105928251	3300031901	Rhizosphere	MNRTILLKWFVRVSRYGLVALFLFTAIAKLAIIKAFVKNMGELLSSSGFDYQRWSWPATIVVIAAEIVTALLLIVPRTVRIGALCAAVLLVGFAAYALYYVYG
Ga0310810_114165371	3300033412	Soil	MNRRILLKWFVRVSRFGLAALFLLTAIAKLAIINTFVKNVGELLSASGFDYQRWSWRATIAVIVAEFVTAILLLVPSTVRIGALCSGVLLIGFASYALYYVYGLHGEPLECGCFGGIIASQLGVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091513

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences