Metagenome / Metatranscriptome Family F091561

Basic Information
Family ID	F091561
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	42 residues
Representative Sequence	ERPSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Number of Associated Samples	76
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.87 %
% of genes near scaffold ends (potentially truncated)	94.39 %
% of genes from short scaffolds (< 2000 bps)	81.31 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (90.654 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.626 % of family members)
Environment Ontology (ENVO)	Unclassified (29.907 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.794 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.39% β-sheet: 0.00% Coil/Unstructured: 60.61%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13751	DDE_Tnp_1_6	11.21
PF01609	DDE_Tnp_1	4.67
PF05598	DUF772	1.87
PF13586	DDE_Tnp_1_2	1.87
PF13565	HTH_32	1.87
PF00589	Phage_integrase	1.87
PF13340	DUF4096	1.87
PF02899	Phage_int_SAM_1	1.87
PF13191	AAA_16	0.93
PF00106	adh_short	0.93
PF04471	Mrr_cat	0.93
PF03551	PadR	0.93
PF08281	Sigma70_r4_2	0.93
PF00400	WD40	0.93
PF13646	HEAT_2	0.93
PF01656	CbiA	0.93
PF07992	Pyr_redox_2	0.93
PF00805	Pentapeptide	0.93
PF14319	Zn_Tnp_IS91	0.93
PF02801	Ketoacyl-synt_C	0.93
PF00271	Helicase_C	0.93
PF09962	DUF2196	0.93
PF02195	ParBc	0.93
PF00005	ABC_tran	0.93
PF01850	PIN	0.93
PF07592	DDE_Tnp_ISAZ013	0.93
PF01619	Pro_dh	0.93
PF13551	HTH_29	0.93
PF12852	Cupin_6	0.93
PF02563	Poly_export	0.93
PF00004	AAA	0.93
PF13546	DDE_5	0.93
PF07876	Dabb	0.93
PF13795	HupE_UreJ_2	0.93
PF13358	DDE_3	0.93
PF13380	CoA_binding_2	0.93
PF13683	rve_3	0.93
PF02230	Abhydrolase_2	0.93
PF00753	Lactamase_B	0.93
PF07690	MFS_1	0.93
PF02416	TatA_B_E	0.93
PF01266	DAO	0.93
PF01411	tRNA-synt_2c	0.93
PF04185	Phosphoesterase	0.93
PF02254	TrkA_N	0.93
PF01396	zf-C4_Topoisom	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	4.67
COG3293	Transposase	Mobilome: prophages, transposons [X]	4.67
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	4.67
COG5421	Transposase	Mobilome: prophages, transposons [X]	4.67
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	4.67
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	4.67
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.87
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.87
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.93
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.93
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.93
COG0013	Alanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0506	Proline dehydrogenase	Amino acid transport and metabolism [E]	0.93
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.93
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.59 %
Unclassified	root	N/A	8.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.59 %
Unclassified	root	N/A	8.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.65 %
Unclassified	root	N/A	8.41 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.45 %
Unclassified	root	N/A	8.41 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.93 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	28.04 %
Unclassified	root	N/A	8.41 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.87 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.87 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.93 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	22.43 %
Unclassified	root	N/A	8.41 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.87 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.93 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.93 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	21.50 %
Unclassified	root	N/A	8.41 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.80 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.87 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.93 %
Chloroflexi bacterium HGW-Chloroflexi-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-9	0.93 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.93 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.93 %
Chlorobia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia	0.93 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Reticulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae	14.95 %
Unclassified	root	N/A	8.41 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	4.67 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.80 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.87 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Ktedonosporobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae	0.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.93 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.93 %
Chlorobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales	0.93 %
Chloroflexi bacterium HGW-Chloroflexi-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-9	0.93 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Reticulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter	14.95 %
Unclassified	root	N/A	8.41 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	3.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.80 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.87 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.93 %
Ktedonosporobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter	0.93 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.93 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	0.93 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Chloroflexi bacterium HGW-Chloroflexi-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-9	0.93 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Reticulibacter mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	14.95 %
Unclassified	root	N/A	8.41 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.80 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	1.87 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.87 %
Ktedonosporobacter rubrisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	0.93 %
Nostoc flagelliforme	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → Nostoc flagelliforme	0.93 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.93 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.93 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	0.93 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Chloroflexi bacterium HGW-Chloroflexi-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-9	0.93 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Reticulibacter mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	14.95 %
Unclassified	root	N/A	8.41 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.80 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.87 %
Ktedonobacter sp. 13_1_40CM_4_52_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	0.93 %
Nostoc flagelliforme CCNUN1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → Nostoc flagelliforme → Nostoc flagelliforme CCNUN1	0.93 %
Ktedonobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	0.93 %
Ktedonosporobacter rubrisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	0.93 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.93 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.93 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	0.93 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.93 %
Chloroflexi bacterium HGW-Chloroflexi-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-9	0.93 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1006584	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300004480\|Ga0062592_101234684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	701	Open in IMG/M
3300005332\|Ga0066388_102339360	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300005332\|Ga0066388_107497829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	547	Open in IMG/M
3300005332\|Ga0066388_107687912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → Nostoc flagelliforme → Nostoc flagelliforme CCNUN1	540	Open in IMG/M
3300005332\|Ga0066388_108163908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	523	Open in IMG/M
3300005457\|Ga0070662_100179419	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300005518\|Ga0070699_100326021	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300005617\|Ga0068859_100281326	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300005719\|Ga0068861_101322375	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300005764\|Ga0066903_100922870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1583	Open in IMG/M
3300005764\|Ga0066903_103075516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	903	Open in IMG/M
3300005764\|Ga0066903_103711664	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005764\|Ga0066903_105329902	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005764\|Ga0066903_106293957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	620	Open in IMG/M
3300005842\|Ga0068858_100253255	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1673	Open in IMG/M
3300005952\|Ga0080026_10007909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	2483	Open in IMG/M
3300006028\|Ga0070717_10143043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2064	Open in IMG/M
3300006844\|Ga0075428_100296024	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300006845\|Ga0075421_100118199	All Organisms → cellular organisms → Bacteria	3328	Open in IMG/M
3300006846\|Ga0075430_101162096	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300006893\|Ga0073928_10332132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	1131	Open in IMG/M
3300007076\|Ga0075435_101797236	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300007982\|Ga0102924_1155694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	1048	Open in IMG/M
3300009012\|Ga0066710_101557473	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300009029\|Ga0066793_10536631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	668	Open in IMG/M
3300009089\|Ga0099828_11650621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	564	Open in IMG/M
3300009094\|Ga0111539_11530623	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300009148\|Ga0105243_10632282	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300009156\|Ga0111538_11227252	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300009792\|Ga0126374_10228421	Not Available	1199	Open in IMG/M
3300010041\|Ga0126312_10930624	Not Available	634	Open in IMG/M
3300010046\|Ga0126384_11521503	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300010046\|Ga0126384_12288425	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300010046\|Ga0126384_12350082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	515	Open in IMG/M
3300010047\|Ga0126382_10043522	All Organisms → cellular organisms → Bacteria	2574	Open in IMG/M
3300010047\|Ga0126382_12289033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	522	Open in IMG/M
3300010358\|Ga0126370_11540698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	633	Open in IMG/M
3300010359\|Ga0126376_10857197	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300010359\|Ga0126376_11161626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-9	784	Open in IMG/M
3300010360\|Ga0126372_10157065	Not Available	1828	Open in IMG/M
3300010362\|Ga0126377_12694824	Not Available	572	Open in IMG/M
3300010366\|Ga0126379_12106197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	666	Open in IMG/M
3300010398\|Ga0126383_10224789	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300010398\|Ga0126383_11610391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	739	Open in IMG/M
3300010398\|Ga0126383_13342743	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300011269\|Ga0137392_10101972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	2264	Open in IMG/M
3300011269\|Ga0137392_10217885	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300012199\|Ga0137383_10350737	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300012199\|Ga0137383_10362884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	1061	Open in IMG/M
3300012206\|Ga0137380_10498440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	1073	Open in IMG/M
3300012207\|Ga0137381_11530417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp.	558	Open in IMG/M
3300012356\|Ga0137371_10415224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	1043	Open in IMG/M
3300012357\|Ga0137384_10387825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1155	Open in IMG/M
3300012359\|Ga0137385_11445729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	551	Open in IMG/M
3300012948\|Ga0126375_11658619	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300012971\|Ga0126369_10094075	Not Available	2695	Open in IMG/M
3300012971\|Ga0126369_10183904	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300012971\|Ga0126369_10495914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1278	Open in IMG/M
3300012971\|Ga0126369_10519426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M
3300012971\|Ga0126369_11927867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	679	Open in IMG/M
3300013501\|Ga0120154_1109816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300015373\|Ga0132257_100462772	All Organisms → cellular organisms → Bacteria → Acidobacteria	1551	Open in IMG/M
3300016371\|Ga0182034_10039394	All Organisms → cellular organisms → Bacteria	3034	Open in IMG/M
3300016404\|Ga0182037_10827027	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300017932\|Ga0187814_10455361	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300019233\|Ga0184645_1115483	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300019233\|Ga0184645_1130512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	775	Open in IMG/M
3300019377\|Ga0190264_12269848	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300020075\|Ga0206349_1040975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2927	Open in IMG/M
3300021073\|Ga0210378_10203882	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300025961\|Ga0207712_10078868	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300026329\|Ga0209375_1269099	Not Available	562	Open in IMG/M
3300026547\|Ga0209156_10384710	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300027706\|Ga0209581_1047588	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300027880\|Ga0209481_10481045	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300027909\|Ga0209382_10372071	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	1596	Open in IMG/M
3300027909\|Ga0209382_10877085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	947	Open in IMG/M
3300028380\|Ga0268265_12026934	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300029898\|Ga0247046_1033125	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1172	Open in IMG/M
3300029898\|Ga0247046_1052462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	742	Open in IMG/M
3300030523\|Ga0272436_1003553	All Organisms → cellular organisms → Bacteria	19596	Open in IMG/M
3300030523\|Ga0272436_1008462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	10176	Open in IMG/M
3300030523\|Ga0272436_1013490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	6979	Open in IMG/M
3300030523\|Ga0272436_1095260	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1079	Open in IMG/M
3300031449\|Ga0272429_1021525	All Organisms → cellular organisms → Bacteria	6394	Open in IMG/M
3300031472\|Ga0272437_1167468	Not Available	1247	Open in IMG/M
3300031573\|Ga0310915_10040663	Not Available	2959	Open in IMG/M
3300031573\|Ga0310915_10370231	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300031573\|Ga0310915_10382795	Not Available	999	Open in IMG/M
3300031724\|Ga0318500_10037450	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300031740\|Ga0307468_100068892	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300031771\|Ga0318546_10892718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	626	Open in IMG/M
3300031879\|Ga0306919_10753370	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300031890\|Ga0306925_11300560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	723	Open in IMG/M
3300031910\|Ga0306923_10142034	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	2737	Open in IMG/M
3300031910\|Ga0306923_12037746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	581	Open in IMG/M
3300031912\|Ga0306921_10118923	All Organisms → cellular organisms → Bacteria	3077	Open in IMG/M
3300031912\|Ga0306921_11723537	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300031945\|Ga0310913_10027465	All Organisms → cellular organisms → Bacteria	3598	Open in IMG/M
3300031945\|Ga0310913_10120712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	1789	Open in IMG/M
3300031947\|Ga0310909_10174538	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300032001\|Ga0306922_12419005	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300033181\|Ga0272431_10021482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6139	Open in IMG/M
3300033181\|Ga0272431_10021831	All Organisms → cellular organisms → Bacteria	6071	Open in IMG/M
3300033551\|Ga0247830_10242676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1361	Open in IMG/M
3300034661\|Ga0314782_023941	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.11%
Host-Associated	Host-Associated	15.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.64%
Plants	Host-Associated → Plants	15.89%
Aquatic	Environmental → Aquatic	7.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.21%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	7.48%
Freshwater	Environmental → Aquatic → Freshwater	5.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.67%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.01%
Loam	Environmental → Terrestrial → Soil → Loam	10.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.28%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	7.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.80%
Ice	Environmental → Aquatic → Freshwater → Ice	1.87%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.41%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	7.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	7.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.80%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	1.87%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029898	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_U-A1b	Environmental	Open in IMG/M
3300030523	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak white sandstone	Environmental	Open in IMG/M
3300031449	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt sud	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300033181	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace sud	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091561

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10065842	3300000580	Forest Soil	PSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPMRI*
Ga0062592_1012346842	3300004480	Soil	FPPSGERPSFPAIHRQVLLWLFQDVVLWLMATNQIAHFRPRRI*
Ga0066388_1023393601	3300005332	Tropical Forest Soil	VSAGGLPARWAFPPSGKRPSFPAVHRQVLVWLFQDVVLWLIATNQIAHFRPRRI*
Ga0066388_1074978291	3300005332	Tropical Forest Soil	PSGERPSFPAIHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0066388_1076879121	3300005332	Tropical Forest Soil	FLCLLARTFPPSVTRSSLPHVHRQVLLWLFQDLVLWLIQTDLIKSFRPRRN*
Ga0066388_1081639082	3300005332	Tropical Forest Soil	RASAGGPPTRQALPPSGERPSFPAVHRQGLLWLFQDVVLGLIATNQIAQFRPRRI*
Ga0070662_1001794191	3300005457	Corn Rhizosphere	PSGERPSFPAVHRQVLVWLFQDVVLWLIATNQITHFRPRRI*
Ga0070699_1003260211	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RAFPPSGERPSLPAVHRRILVWLFQDVVLWLIASNQIAQFRPRRI*
Ga0068859_1002813261	3300005617	Switchgrass Rhizosphere	RASAGCLPTRRAFPPSGERPSFPAVHRQVLLLLFQDVVLWLIATNQIAHFRPMRI*
Ga0068861_1013223751	3300005719	Switchgrass Rhizosphere	FPAVHRQVLVWLFQDVVLWLIATNQITHFRPRRI*
Ga0066903_1009228703	3300005764	Tropical Forest Soil	WRAFPPSGERPSLPAVHRQVLVWLFQDVVLWLIATNQIAQFRPRRI*
Ga0066903_1030755161	3300005764	Tropical Forest Soil	SFPAVHRQVLVWLFQDVVLWLIATNQISHFRPRRI*
Ga0066903_1037116642	3300005764	Tropical Forest Soil	FPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0066903_1053299021	3300005764	Tropical Forest Soil	FPPSGERPSLPAVHRQVLLWLFQDVVLWLIATNQIAHFCPRRI*
Ga0066903_1062939572	3300005764	Tropical Forest Soil	MPNSLPGVHRQVLLWLFQDLLWWLIHTQQIEFFRPRRN*
Ga0068858_1002532552	3300005842	Switchgrass Rhizosphere	LPTRRAFPPSGARPSFPAVHRQVLVWLFQDVVLWLIATNQISQFRPRQI*
Ga0080026_100079094	3300005952	Permafrost Soil	FPPSVTRRSLPSVHRQVLLWLFQDLVLWLIQTDQIKTFRPRRN*
Ga0070717_101430431	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LPACHRQMLVLLFQDVVLWLIETEQIKTFRPRRN*
Ga0075428_1002960242	3300006844	Populus Rhizosphere	SFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0075421_1001181994	3300006845	Populus Rhizosphere	VADAMIEALERPSFPAVHRQVLLWLFQDVVLWLIATNQITHFRPRRI*
Ga0075430_1011620961	3300006846	Populus Rhizosphere	PSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0073928_103321323	3300006893	Iron-Sulfur Acid Spring	FPPSVTRSSLPSVHRQVLLWLFQDLVLWLLHTQQIESFRPRRN*
Ga0075435_1017972362	3300007076	Populus Rhizosphere	SGERPSFPAVHRQVLLWLFQDVVLWLCATNQIAHFRPRRI*
Ga0102924_11556943	3300007982	Iron-Sulfur Acid Spring	SLPGVHQQVLLWLFQDLVLWLLHTQQFDSFCPRRN*
Ga0066710_1015574731	3300009012	Grasslands Soil	SFPAVHRQVLVWLFQDVVLWLIATNQIAHFRPRRI
Ga0066793_105366311	3300009029	Prmafrost Soil	SSLPHVHRQVLLWLFQDLVLWLIQTDQIKTFRPRRN*
Ga0099828_116506211	3300009089	Vadose Zone Soil	SLPHVHRQVLLWLFQDLVLWLIQTDQIKTFRPRRN*
Ga0111539_115306232	3300009094	Populus Rhizosphere	PSFPAVHRQVLLWLFQDVVLWLCATNQIAHFRPRRI*
Ga0105243_106322823	3300009148	Miscanthus Rhizosphere	LPTRRAFPPSGARPSFPAVHRQVLVWLFQDVVLWLIATYSFSQFRPRQI*
Ga0111538_112272522	3300009156	Populus Rhizosphere	FPAVHRQVLLWLFQDVVLWLIATNQIAHFRPRRI*
Ga0126374_102284211	3300009792	Tropical Forest Soil	SGERPSFPAIHRQGRLWLFQDVVLWLIATNQIAHFRPRRI*
Ga0126312_109306242	3300010041	Serpentine Soil	SLPAVHRRVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0126384_115215031	3300010046	Tropical Forest Soil	PTAFWRASAGRPPTWRAFPPSGERPSFPAIHRQVLLWLFQDVVLGLIATNQIAHFRPRRI
Ga0126384_122884251	3300010046	Tropical Forest Soil	SFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPRRI*
Ga0126384_123500821	3300010046	Tropical Forest Soil	PTVFWRASAGRPPTRRAFPPSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPMRI
Ga0126382_100435223	3300010047	Tropical Forest Soil	RRAFPPSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPRRI*
Ga0126382_122890331	3300010047	Tropical Forest Soil	SFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPMRN*
Ga0126370_115406982	3300010358	Tropical Forest Soil	ERRSFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPRRI*
Ga0126376_108571971	3300010359	Tropical Forest Soil	TSGERPSFPAVHRQVLVWFLQDVVLGFIATNQITHFRPRRL*
Ga0126376_111616261	3300010359	Tropical Forest Soil	AFWRASAGRPPIWRAFPPSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPRRI*
Ga0126372_101570653	3300010360	Tropical Forest Soil	PSFPAVHRQVLLWLFQDVVLWLIATNQIIHFRPRRI*
Ga0126377_126948242	3300010362	Tropical Forest Soil	PSFPAIHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0126379_121061973	3300010366	Tropical Forest Soil	WRASAGRPPTRRAFPPSGERPSFPAIHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0126383_102247891	3300010398	Tropical Forest Soil	ERPSFPAVHRQVLLWLFQDVVLWLIATNQIIHFRPRRI*
Ga0126383_116103911	3300010398	Tropical Forest Soil	RAFPPSGERPSFPAIHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0126383_133427432	3300010398	Tropical Forest Soil	FPPSGERPSFPAIHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0137392_101019721	3300011269	Vadose Zone Soil	LARLFPPSVTRSSLPHVHRQVLLWLFQDLVLWLIQTDQIKTFRPRRN*
Ga0137392_102178853	3300011269	Vadose Zone Soil	PPSGERPSFPAVHRQVLLWLFQDVVLWLFATNQIAHFRPRRI*
Ga0137383_103507372	3300012199	Vadose Zone Soil	PPSGARPSFPAVHRQVLLWLFQDVVLWLIATNQIVQFRPRRI*
Ga0137383_103628841	3300012199	Vadose Zone Soil	SLPSVHRQVLLWLFQDLVLWLIQTDQIEAFRPRRN*
Ga0137380_104984403	3300012206	Vadose Zone Soil	FLCLRTRTFPPSVTRSSLPYVHRQVLLWLFQDLVLWLIQTDQIKTFRPRRN*
Ga0137381_115304172	3300012207	Vadose Zone Soil	ECLFLCLRTRTFPPSVTRSSLPYVHRQVLLWLFQDLVLWLIQTDQIKTFRPRRN*
Ga0137371_104152241	3300012356	Vadose Zone Soil	KRPSFPAVHRQVLVWLFQDVVLWLIATNQISQFRPRRI*
Ga0137384_103878251	3300012357	Vadose Zone Soil	CLPIVSWRCNALPFLCLRTRTFPPSVTRRPLPYVHRQVLLWLFQDLVLWLIQTDQIKTFRPRRN*
Ga0137385_114457291	3300012359	Vadose Zone Soil	PSVTRNSLPFVHRQVLLWLFQDLVLWLLHTQQVESFRPRRN*
Ga0126375_116586192	3300012948	Tropical Forest Soil	WRAFPPSGERPSFPAIHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0126369_100940753	3300012971	Tropical Forest Soil	SFPAIHRQVLLWLFQDVVLWLIATNQIAQFRPRRI*
Ga0126369_101839042	3300012971	Tropical Forest Soil	PSGERPSFPAVHRQVLRWLFQDVVLWLIATNQIAHFRPRRI*
Ga0126369_104959141	3300012971	Tropical Forest Soil	GERPSLPAVDRQVLLWLFQDVVLWLIATNQIAHFCPRRI*
Ga0126369_105194261	3300012971	Tropical Forest Soil	SFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPMRI*
Ga0126369_119278671	3300012971	Tropical Forest Soil	SLPSVHRQVLLWFFQDLVLWLIESDQIKSFRPRRN*
Ga0120154_11098162	3300013501	Permafrost	PLTFPATHRQILVWLFQDLVQWLILTDQVSMFRPRRN*
Ga0132257_1004627723	3300015373	Arabidopsis Rhizosphere	FPPSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPRRI*
Ga0182034_100393941	3300016371	Soil	RPSFPAVHRQILLWLFQDVVLWLIATNQITHFRPRRI
Ga0182037_108270271	3300016404	Soil	LLPPKGVEGGFPPSTRRSSLPAAHRTILLWLCQDLVLWLIATDQIKAFRPRRN
Ga0187814_104553611	3300017932	Freshwater Sediment	RSSLPHVHRQVLLWLFQDLVLWLIQSDQIKTFRPRRN
Ga0184645_11154833	3300019233	Groundwater Sediment	MPADMAGFSPSGERPSFPAVHRQVLLWLFQDVVLWLIATNQITQFRPRRI
Ga0184645_11305122	3300019233	Groundwater Sediment	SGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0190264_122698481	3300019377	Soil	AFPPSGERPSFPAVHRQGLLWLFQDVVLWLIATNQIAHFRPMRN
Ga0206349_10409752	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MVLLRKVRAYGLFPPSVTRSSLPGVHRQVLLWLFQDLVLWLLHTQQIETFRPRRN
Ga0210378_102038821	3300021073	Groundwater Sediment	MAGFSPSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0207712_100788684	3300025961	Switchgrass Rhizosphere	PSFPAVHRQVLVWLFQDVVLWLIATNQITHFRPRRI
Ga0209375_12690992	3300026329	Soil	PSFPAVHRQVLVWLFQDVVLWLIATNQIAHFRPRRI
Ga0209156_103847101	3300026547	Soil	FPPSVTRSSLPSVHRQVLLWLFQDLVLWLIQTDQIKSFRPRRN
Ga0209581_10475882	3300027706	Surface Soil	SSLPGVHRQVLLWLFQDLVLWLLHTQQVESFRPRRN
Ga0209481_104810451	3300027880	Populus Rhizosphere	PSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0209382_103720712	3300027909	Populus Rhizosphere	SFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0209382_108770852	3300027909	Populus Rhizosphere	ERPSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0268265_120269342	3300028380	Switchgrass Rhizosphere	SFPAVHRQVLLRLFQDAVLWLIATNQITHFRPRRI
Ga0247046_10331251	3300029898	Cryconite	SLPAVHRAILLWLFQDLVLWLIATDQIQAFRPCRI
Ga0247046_10524621	3300029898	Cryconite	AFPPSGPRPSLPAAHRAILLWLFQDLVLWLIATDQIQAFRPRRI
Ga0272436_100355330	3300030523	Rock	TTFPAMHRQILTWLFQDLVLWLIETDQVTAFRPRRN
Ga0272436_100846211	3300030523	Rock	RQLSLPACHRQVLVLLFQDVVLWLIETEQVKAFRPRRN
Ga0272436_10134901	3300030523	Rock	AGTTFPAMHRQILTWLFQDLVLWLIETDQVTAFRPRRN
Ga0272436_10952601	3300030523	Rock	ATFPAMHRQVLTWLFQDLVLWLIETDQITAFRPRRS
Ga0272429_10215251	3300031449	Rock	QISLPACHRLVLVLLFQDVVLWLIETEQVKAFRPRRN
Ga0272437_11674683	3300031472	Rock	ISLPACHRLVLVLLFQDVVLWLIETEQVKAFRPRRN
Ga0310915_100406634	3300031573	Soil	RRSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0310915_103702311	3300031573	Soil	PIWRAFPPSGERPSLPAVHRQVLLWLFQDVVLWLIATNQIAHFRPRRI
Ga0310915_103827952	3300031573	Soil	PSGERRSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRSRRI
Ga0318500_100374501	3300031724	Soil	PSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPMRI
Ga0307468_1000688922	3300031740	Hardwood Forest Soil	RRAFPPSGERPSFPAVHRQVLVWLFQDVVLWLIATNQIAHFRPMQI
Ga0318546_108927181	3300031771	Soil	PSFPAVHRQVLVWLFQDVVLWLIATNQINHFRPRRI
Ga0306919_107533701	3300031879	Soil	PSFPAIHRQVLLWLFQDVVFWLIATNHIAQCRPRRI
Ga0306925_113005602	3300031890	Soil	VFWRASVGRPPPWRAFPPSGERPSFPAIHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0306923_101420341	3300031910	Soil	WRAFPPSGERPSFPAIHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0306923_120377461	3300031910	Soil	GQRPSFPAVHRQVLVWLFQDVVLWLIATNQIAHFRPRRI
Ga0306921_101189233	3300031912	Soil	AASAGFSPSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPRRI
Ga0306921_117235371	3300031912	Soil	PWRAFPPSGERPSFPAIHRQVLLWLFQDVVFWLIATNHIAQFRPRRI
Ga0310913_100274653	3300031945	Soil	FPPSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPMRI
Ga0310913_101207121	3300031945	Soil	ERRSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0310909_101745381	3300031947	Soil	ASVGRPPPWRAFPPSGERPSFPAIHRQVLLWLFQDVVFWLIATNHIAQFRPRRI
Ga0306922_124190052	3300032001	Soil	CIGISHSLCSRIAFSRASAGCPPTRRAFPPSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAQFRPRRI
Ga0272431_100214829	3300033181	Rock	GTTFPAMHRQILTWLFQDLVLWLIETDQVTAFRPRRN
Ga0272431_100218319	3300033181	Rock	TFPAMHRQILTWLFQDLVLWLIETDQVTAFRPRRN
Ga0247830_102426761	3300033551	Soil	NKLPQKNLCSGERPSFPAVHRQVLLWLFQDVVLWLIATNQIAHFRPMRI
Ga0314782_023941_3_116	3300034661	Soil	RPSLPAVHRRILVWLFQDVVLWLIASNQIAQFRPRRI

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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