Metagenome Family F091564

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091564
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	67 residues
Representative Sequence	MFPVKRLEKMHEELERYYLQVITYPKADPNYLYIANKLSKNLSELDSIIKDIRKYNYNNKNNPLIHIINK
Number of Associated Samples	67
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.83 %
% of genes near scaffold ends (potentially truncated)	15.89 %
% of genes from short scaffolds (< 2000 bps)	82.24 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.290 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.822 % of family members)
Environment Ontology (ENVO)	Unclassified (24.299 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.318 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.08% β-sheet: 0.00% Coil/Unstructured: 45.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.183.1.1: Nop domain	d2ozbb1	2ozb	0.85412
f.5.1.0: automated matches	d3pika_	3pik	0.85305
a.2.5.1: Prefoldin	d1fxka_	1fxk	0.84303
f.5.1.0: automated matches	d1yc9a_	1yc9	0.84084
c.49.2.0: automated matches	d5ik2g_	5ik2	0.83868

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03352	Adenine_glyco	7.48
PF08240	ADH_N	3.74
PF00210	Ferritin	3.74
PF00892	EamA	2.80
PF08241	Methyltransf_11	0.93
PF13531	SBP_bac_11	0.93
PF01988	VIT1	0.93
PF07690	MFS_1	0.93
PF03413	PepSY	0.93
PF07311	Dodecin	0.93
PF01436	NHL	0.93
PF01904	DUF72	0.93
PF01544	CorA	0.93
PF00149	Metallophos	0.93
PF15956	DUF4760	0.93
PF07080	DUF1348	0.93
PF00211	Guanylate_cyc	0.93
PF01243	Putative_PNPOx	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	7.48
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.93
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.93
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.93
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.93
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.93
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.93
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
All Organisms	root	All Organisms	32.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
cellular organisms	root	All Organisms → cellular organisms	32.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	29.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	12.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	12.15 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	5.61 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	4.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
unclassified Thaumarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	5.61 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	2.80 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	1.87 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	5.61 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2.80 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	1.87 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.93 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	2.80 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2.80 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1.87 %
unclassified Nitrosopumilus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus	1.87 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.93 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.29 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2.80 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2.80 %
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1.87 %
Nocardiopsis alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis alba	0.93 %
Candidatus Nitrosocosmicus oleophilus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus oleophilus	0.93 %
Thaumarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0560334	Not Available	993	Open in IMG/M
3300000787\|JGI11643J11755_11768444	Not Available	696	Open in IMG/M
3300000787\|JGI11643J11755_11770354	All Organisms → cellular organisms → Archaea	1062	Open in IMG/M
3300000787\|JGI11643J11755_11790593	Not Available	942	Open in IMG/M
3300003321\|soilH1_10136040	Not Available	1105	Open in IMG/M
3300003324\|soilH2_10351492	Not Available	1405	Open in IMG/M
3300003987\|Ga0055471_10002176	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	3285	Open in IMG/M
3300003987\|Ga0055471_10163833	Not Available	683	Open in IMG/M
3300003987\|Ga0055471_10301908	Not Available	513	Open in IMG/M
3300003996\|Ga0055467_10095776	Not Available	838	Open in IMG/M
3300003997\|Ga0055466_10111277	Not Available	754	Open in IMG/M
3300003998\|Ga0055472_10022149	Not Available	1401	Open in IMG/M
3300003999\|Ga0055469_10017144	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1602	Open in IMG/M
3300004013\|Ga0055465_10004121	All Organisms → cellular organisms → Archaea	2427	Open in IMG/M
3300004013\|Ga0055465_10066461	Not Available	1010	Open in IMG/M
3300004463\|Ga0063356_103539381	Not Available	673	Open in IMG/M
3300004463\|Ga0063356_106265541	Not Available	510	Open in IMG/M
3300005844\|Ga0068862_102456020	Not Available	533	Open in IMG/M
3300006844\|Ga0075428_100165700	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300006844\|Ga0075428_100696392	Not Available	1082	Open in IMG/M
3300006844\|Ga0075428_102454614	Not Available	534	Open in IMG/M
3300006845\|Ga0075421_100360173	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon	1755	Open in IMG/M
3300006845\|Ga0075421_101075566	Not Available	905	Open in IMG/M
3300006847\|Ga0075431_101117303	Not Available	752	Open in IMG/M
3300006847\|Ga0075431_102151224	Not Available	512	Open in IMG/M
3300006853\|Ga0075420_100815654	Not Available	803	Open in IMG/M
3300006876\|Ga0079217_10021176	All Organisms → cellular organisms → Archaea	2290	Open in IMG/M
3300006876\|Ga0079217_10049852	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1675	Open in IMG/M
3300006876\|Ga0079217_10060995	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1557	Open in IMG/M
3300006876\|Ga0079217_10100796	Not Available	1297	Open in IMG/M
3300006876\|Ga0079217_10118306	Not Available	1225	Open in IMG/M
3300006876\|Ga0079217_10763813	Not Available	663	Open in IMG/M
3300006876\|Ga0079217_10773787	Not Available	661	Open in IMG/M
3300006880\|Ga0075429_100123501	Not Available	2264	Open in IMG/M
3300006894\|Ga0079215_10844573	Not Available	647	Open in IMG/M
3300006918\|Ga0079216_10061855	All Organisms → cellular organisms → Archaea	1671	Open in IMG/M
3300006918\|Ga0079216_10089861	All Organisms → cellular organisms → Archaea	1459	Open in IMG/M
3300007004\|Ga0079218_10082065	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2145	Open in IMG/M
3300007004\|Ga0079218_11204217	Not Available	786	Open in IMG/M
3300007004\|Ga0079218_12765524	Not Available	587	Open in IMG/M
3300007004\|Ga0079218_13425338	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	538	Open in IMG/M
3300009094\|Ga0111539_10085042	All Organisms → cellular organisms → Archaea	3718	Open in IMG/M
3300009157\|Ga0105092_10609688	Not Available	631	Open in IMG/M
3300009168\|Ga0105104_10106021	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1513	Open in IMG/M
3300009789\|Ga0126307_10004377	All Organisms → cellular organisms → Archaea	9774	Open in IMG/M
3300009789\|Ga0126307_10028375	All Organisms → cellular organisms → Archaea	4290	Open in IMG/M
3300009789\|Ga0126307_10042618	All Organisms → cellular organisms → Archaea	3528	Open in IMG/M
3300009789\|Ga0126307_10251400	Not Available	1421	Open in IMG/M
3300010036\|Ga0126305_10126730	All Organisms → cellular organisms → Archaea	1566	Open in IMG/M
3300010036\|Ga0126305_10384603	Not Available	923	Open in IMG/M
3300010037\|Ga0126304_10003220	All Organisms → cellular organisms → Archaea	8209	Open in IMG/M
3300010037\|Ga0126304_10096529	All Organisms → cellular organisms → Archaea	1863	Open in IMG/M
3300010038\|Ga0126315_10114312	Not Available	1563	Open in IMG/M
3300010038\|Ga0126315_11018178	Not Available	556	Open in IMG/M
3300010039\|Ga0126309_10067348	All Organisms → cellular organisms → Archaea	1761	Open in IMG/M
3300010039\|Ga0126309_10384956	Not Available	835	Open in IMG/M
3300010041\|Ga0126312_11359415	Not Available	526	Open in IMG/M
3300010166\|Ga0126306_11898116	Not Available	500	Open in IMG/M
3300010399\|Ga0134127_13092309	Not Available	543	Open in IMG/M
3300012891\|Ga0157305_10079072	Not Available	770	Open in IMG/M
3300013102\|Ga0157371_11178129	Not Available	590	Open in IMG/M
3300015371\|Ga0132258_11389506	Not Available	1774	Open in IMG/M
3300018073\|Ga0184624_10254202	Not Available	788	Open in IMG/M
3300018465\|Ga0190269_10651442	Not Available	724	Open in IMG/M
3300018465\|Ga0190269_11866409	Not Available	516	Open in IMG/M
3300018466\|Ga0190268_10005931	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	3022	Open in IMG/M
3300018466\|Ga0190268_10020563	All Organisms → cellular organisms → Archaea	2136	Open in IMG/M
3300018466\|Ga0190268_10090725	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1384	Open in IMG/M
3300018466\|Ga0190268_10144452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis alba	1202	Open in IMG/M
3300018466\|Ga0190268_10654487	Not Available	759	Open in IMG/M
3300018469\|Ga0190270_10108952	All Organisms → cellular organisms → Archaea	2145	Open in IMG/M
3300018469\|Ga0190270_10503849	Not Available	1155	Open in IMG/M
3300018469\|Ga0190270_10633964	Not Available	1048	Open in IMG/M
3300018476\|Ga0190274_10255685	Not Available	1592	Open in IMG/M
3300018481\|Ga0190271_10995225	Not Available	963	Open in IMG/M
3300018481\|Ga0190271_11412866	Not Available	814	Open in IMG/M
3300018481\|Ga0190271_11676653	Not Available	750	Open in IMG/M
3300019356\|Ga0173481_10032102	All Organisms → cellular organisms → Archaea	1693	Open in IMG/M
3300019767\|Ga0190267_10005816	Not Available	3164	Open in IMG/M
3300019884\|Ga0193741_1000752	All Organisms → cellular organisms → Archaea	9552	Open in IMG/M
3300024430\|Ga0196962_10002737	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	5678	Open in IMG/M
3300024430\|Ga0196962_10190837	Not Available	657	Open in IMG/M
3300025537\|Ga0210061_1013324	Not Available	1316	Open in IMG/M
3300025559\|Ga0210087_1052373	Not Available	817	Open in IMG/M
3300025559\|Ga0210087_1054283	Not Available	802	Open in IMG/M
3300025567\|Ga0210076_1046938	Not Available	933	Open in IMG/M
3300027552\|Ga0209982_1086940	Not Available	517	Open in IMG/M
3300027637\|Ga0209818_1294843	Not Available	501	Open in IMG/M
3300027675\|Ga0209077_1118187	Not Available	738	Open in IMG/M
3300027722\|Ga0209819_10101744	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1003	Open in IMG/M
3300027743\|Ga0209593_10161803	Not Available	800	Open in IMG/M
3300027876\|Ga0209974_10323498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	594	Open in IMG/M
3300027880\|Ga0209481_10155920	Not Available	1129	Open in IMG/M
3300027886\|Ga0209486_10699070	Not Available	653	Open in IMG/M
3300027907\|Ga0207428_10413406	Not Available	987	Open in IMG/M
3300027909\|Ga0209382_10038105	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus oleophilus	5770	Open in IMG/M
3300027909\|Ga0209382_11130724	Not Available	806	Open in IMG/M
3300031547\|Ga0310887_10142582	Not Available	1246	Open in IMG/M
3300031547\|Ga0310887_11101226	Not Available	510	Open in IMG/M
3300031858\|Ga0310892_10086616	All Organisms → cellular organisms → Archaea	1676	Open in IMG/M
3300031908\|Ga0310900_11211868	Not Available	628	Open in IMG/M
3300032000\|Ga0310903_10558480	Not Available	605	Open in IMG/M
3300032005\|Ga0307411_11020385	Not Available	742	Open in IMG/M
3300032012\|Ga0310902_11073850	Not Available	562	Open in IMG/M
3300032017\|Ga0310899_10311636	Not Available	733	Open in IMG/M
3300032075\|Ga0310890_10126765	All Organisms → cellular organisms → Archaea	1650	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.44%
Host-Associated	Host-Associated	20.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.75%
Plants	Host-Associated → Plants	20.56%
Aquatic	Environmental → Aquatic	18.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.95%
Marine	Environmental → Aquatic → Marine	12.15%
Freshwater	Environmental → Aquatic → Freshwater	5.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.61%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.95%
Wetlands	Environmental → Aquatic → Marine → Wetlands	12.15%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.67%
Sand	Environmental → Terrestrial → Soil → Sand	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	16.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.95%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	12.15%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.74%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	14.95%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	13.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.08%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.74%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_05603341	2228664021	Soil	MFPVKRLEKMHEELERYYLQVVTYPKADPNYLYIANKLSKNLSELDSIIKNIRKYNYNNKNNPLIDIINK
JGI11643J11755_117684441	3300000787	Soil	MFPVKRLETMQEELHRYYLQVITYQNEDPKXQDIATKFSKNXSELDSIIKDIKIYNYNNKKNPLIHIINK*
JGI11643J11755_117703541	3300000787	Soil	MFPVKRLEKMHEELERYYLQVITYPKADPNYLSIANKLSKNLXELDSIIKDIRKYNYXNKNNPXIXIINK*
JGI11643J11755_117905933	3300000787	Soil	MFPVKRLEKMHEELERYYLQVVTYPKADPNYLYIANKLSKNLLELDSIIKNIRKYNYXQQK*
soilH1_101360401	3300003321	Sugarcane Root And Bulk Soil	MFPIKRLEKIHEELYLYYLQVITYPKKQDPHYQDIATNLSKNMAELEDIIEG
soilH2_103514921	3300003324	Sugarcane Root And Bulk Soil	MFPIKRLEKIHEELYLYYLQVITYPKKQDPHYQDIATNLSKNMAELEDIIEGIRRYNINNKNNPLIHIINQ*
Ga0055471_100021762	3300003987	Natural And Restored Wetlands	MFPLKGLEKIHEELHRYYLQVVTYQNEDQKYQDIVTKLSKNLSELEYTIKNIRKYNKNIENQLIS*
Ga0055471_101638332	3300003987	Natural And Restored Wetlands	MFPVKRLEKMHEELERYYLQVVTYPKADPNYLYIANKLSKNLSELDNIIKNIRKYNYNNKNNPLIDIINK*
Ga0055471_103019081	3300003987	Natural And Restored Wetlands	MFPVKRLEIMHEELERYYLQAITYPKAEPNYQYIANKLSKNLSELDSIIKDIRKYNYNNKNNPLIHIINK*
Ga0055467_100957761	3300003996	Natural And Restored Wetlands	MFPVKRLEKMHEELERYYLQVITYPKADPNYLSIANKLSKNLSELDSIIKDIRKYNYNNKNNPLIHIINK*
Ga0055466_101112772	3300003997	Natural And Restored Wetlands	MFPLKGLEKIHEELHCYYLQVVTYQNEDQKYQDIVTKLSKNLSELEYTIKNI
Ga0055472_100221492	3300003998	Natural And Restored Wetlands	MFPLKGLEKIHEELHCYYLQVVTYQNEDQKYQDIVTKLSKNLSELEYTIKNIRKYNKNIENQLIS*
Ga0055469_100171443	3300003999	Natural And Restored Wetlands	MFPLKGLEKIHEELHRYYLQVVTYQNEDQKYQDIVTKLSKNLSELEYTIKYIRKYNKNMKNQLIS*
Ga0055465_100041212	3300004013	Natural And Restored Wetlands	MFPVKRLEKMHEELERYYLQVVTYPKADPNYLYIANKLSKNLSELDSIIKNIRKYNYNNKNNPLIDIINK*
Ga0055465_100664611	3300004013	Natural And Restored Wetlands	MFPLKGLEKIHEELHRYYLQVVTYQNEDQKYQDIVTKLSKNLSELEYTIKYIRKYNKNMKNQLINNW*
Ga0063356_1035393812	3300004463	Arabidopsis Thaliana Rhizosphere	MFPVKRLEKMHEELYRYYLQVITYQNEDPKYHNIATKLSKNLSELDDIIKDIRIYNYNNKNNLLIHIIKK*
Ga0063356_1062655411	3300004463	Arabidopsis Thaliana Rhizosphere	MFPLKGLEKIHEELHRYHLQVVTYQNEDQQYQDIVTKLSKNLSELEYTIKNIRKYNKNIKNKLIS*
Ga0068862_1024560201	3300005844	Switchgrass Rhizosphere	MFPVKRLEKMHEELYRYYLQVITYQNEDPKYHNIATKLSKNLSELDDIIKDIRIYNYNNK
Ga0075428_1001657001	3300006844	Populus Rhizosphere	MFPVKRLEKMYEELENYYLQVITYPKADPNYLYVANKLSKNLSELDSIIKDIRKYNYINKNNPLIHIINK*
Ga0075428_1006963922	3300006844	Populus Rhizosphere	MFPVKRLETMQEELHRYYLQVITYQNEDPKYQDIATKFSKNLSELDNIIKDIKIYNYNNKKNPLIHIINK*
Ga0075428_1024546141	3300006844	Populus Rhizosphere	KRLETMQEELHRYYLQVITYQNEDPKYQDIATKFSKNLSELDSIIKDIRIYNYNNKKNPLIHIINK*
Ga0075421_1003601733	3300006845	Populus Rhizosphere	MFPVKRLEKMHEELERYYLQVVTYPKADPNYLYIANKLSKNLSELDSIIKNIRKYNYNNKNNPLIHIINK*
Ga0075421_1010755661	3300006845	Populus Rhizosphere	MFPVKRLETMQEELHRYYLQVITYQNEDPKYQDIATKFSKNLSELDSIIKDIRIYNYNNKKNPLIHIINK*
Ga0075431_1011173031	3300006847	Populus Rhizosphere	MFPVKRLETMQEELHRYYLQVITYQNEDPKYQDIATKFSKNLSELDSIIKDIKIYNYNNKKNPLIHIINK*
Ga0075431_1021512241	3300006847	Populus Rhizosphere	EELHRYYLQVITYQNEDPKYQDIATKFSKNLSELDSIIKDIRIYNYNNKKNPLIHIINK*
Ga0075420_1008156542	3300006853	Populus Rhizosphere	MFPVKRLEKMYEELENYYLQVITYPKADPNYLYVANKLSKNLSELDSIIKDIRKIQLH*
Ga0079217_100211762	3300006876	Agricultural Soil	MFPIKTLDKINEELHRYYLQIITFQNEDPHYQDIAAKFSKNLSELEDVIVDIKKYNNNKKNNPLIHIFK*
Ga0079217_100498523	3300006876	Agricultural Soil	MFPLKGLEKIHEELYRYYLQVITYQNEDQEYQVIATKLSKNLSELEYIIKYIRKYNKNIKNQLIT*
Ga0079217_100609952	3300006876	Agricultural Soil	MFDKKIRKIHEELHRYYLQVITYQKELDPNYQDIATKLSKNMSELEDIIKDIKKYNISNKNNPLFHIINK*
Ga0079217_101007962	3300006876	Agricultural Soil	MFPIKRLEKIQEELHRYYLQVIAFQNNNPQYQDIATKFSRNLSELEDIIEDIRIYNNNSKNNPLIHIFK*
Ga0079217_101183062	3300006876	Agricultural Soil	MFPLQRLEKIHEELHRYYLQVITYQNEDPKYQDIATKLSKNLSELEDVIKDIRKYNTNNKNNPLIHIINK*
Ga0079217_107638131	3300006876	Agricultural Soil	MFPIKRLEKTHEELHRYYLQVITFQDKDSQYQDIATKFSKNLSELEDIIEDIRIYNNNSKNNPLIHIFK*
Ga0079217_107737871	3300006876	Agricultural Soil	MFPVKRLEQMHEELHRYYLQVITYPKAEPKYLEIATRLSKNLSELDGIIKDIRIYNYNNKNNPLIHIINK*
Ga0075429_1001235012	3300006880	Populus Rhizosphere	MFPVKRLEKMHEELENYYLQVITYPKADPNYLYVANKLSKNLSELDSIIKDIRKIQLH*
Ga0079215_108445732	3300006894	Agricultural Soil	MFYKKIRKIHEELHRYYLQVITYQKELDPNYQDIATKLSKNMSELEDIIKDIKKYNISNKNNPLFHIINK*
Ga0079216_100618551	3300006918	Agricultural Soil	MFPLQRLEKIHEELHRYYLQVITYQNEDPKYQDIATKLSKNLSKLEDVIKGIRKYNINNKNNPLIHIINK*
Ga0079216_100898611	3300006918	Agricultural Soil	MFPIKTLDKINEELHRYYLQIITFQNEDPHYQEIAAKFSKNLLELEDVIVDIKKYNNNKKNNPLIHIFK*
Ga0079218_100820654	3300007004	Agricultural Soil	MFPIKRLEKTHEELHRYYLHVITFQDKDSQYQDIATKFSKNLSELEDIIEDIRIYNNNSKNNPLIHIFK*
Ga0079218_112042171	3300007004	Agricultural Soil	MFPLQRLEKIHEELHRYYLQVITYQNEDPNYQDIATKLSKNLSELEAVIKDIRKYNTNNKKNPLIHIINK*
Ga0079218_127655242	3300007004	Agricultural Soil	MFPLKGLEKIHEELYRYYLQVITYQNEDQEYQVIATKLSKNLSELEYIIKYIRKYNKNIKNQLIN*
Ga0079218_134253381	3300007004	Agricultural Soil	LHRYYLQVITYQKELDPNYQDITTKLSKNMSELEDIIKDIKKYNISNKNNPLFHIINK*
Ga0105098_105483081	3300009081	Freshwater Sediment	MFPIKTLDKINEELHRYYLQIITFQNEDPHYQEIAAKFSKNLSEL
Ga0111539_100850424	3300009094	Populus Rhizosphere	MFPVKRLEKMHEELYRYYLQVITYQNEDPKYHNIATKLSKNLSELDNIIKDIRIYNYNNKNNLLIHIIKK*
Ga0105092_106096881	3300009157	Freshwater Sediment	MFPIKRLEKIHEELHRYYLQVITYQKELDPNYQDIATKLSKNMSELEDIIKDIKKYNISNKNNPLIHIINK*
Ga0105104_101060212	3300009168	Freshwater Sediment	MFPVKKLEKMHEELERYYLQAVTYPKAEPNYLYIANKLSKNLSELDSIIKDIRRYNYNNKNNTLIHIINK*
Ga0126307_100043775	3300009789	Serpentine Soil	MFPLKGLENTHEELYRYYLQVINYQNEDQEYQDIVTKLSKNLSELEYTIKYIRKYNKNIKNQLID*
Ga0126307_100283753	3300009789	Serpentine Soil	MFPIKRLEKIHEELHHYYSQIITFQNEDSQYQDIATKFSKNLSELEDIIEDIRLYNNYNKNNSLIHIFK*
Ga0126307_100426183	3300009789	Serpentine Soil	MFPIKRVEKIHEELYHYYLQIITFQNGDPQYQDIATKFSKNLSELDSIIEDIRIYNNNSKNNPLIHIFK*
Ga0126307_102514002	3300009789	Serpentine Soil	MFPIKTLDKIYEELHRYYLQIITFQNEDPHYQDIEAKFSKNLSELEDVIVDIKKYNNNKKNNPLIHIFK*
Ga0126305_101267302	3300010036	Serpentine Soil	MFPIKRIEKIHEELYHYYLQIITFQNGDPQYQDIATKFSKNLSELDSIIEDIRIYNNNSKNNPLIHIFK*
Ga0126305_103846032	3300010036	Serpentine Soil	MFPIKTLDKIYEEFHRYYLQIIAFQNEDPHYQDIEAKFSKNLSELEDVIVDIKKYNNN
Ga0126304_100032203	3300010037	Serpentine Soil	MFPLKGLENTHEELYRYYLQVVTYQNEDQEYQDIVTKLSKNLSELEYTIKYIRKYNKNIKNQLID*
Ga0126304_100965292	3300010037	Serpentine Soil	MFPIKTLDKINEELHRYYLQIITFHNEDPHYQEIAAKFSKNLSELEDVIVDIKKYNNNKKNNPLIHIFK*
Ga0126315_101143121	3300010038	Serpentine Soil	MFPLKGLEKIHEELHRYYLQVITYQNEDQEYQDIVTKLSKNLSELEYIIKYIRKYNKNMKNQLIN*
Ga0126315_110181781	3300010038	Serpentine Soil	MFPIKRLEKMYQELHRYYLQVITYQNKDPKYQDIATKLSKNLSELEDVIRDIRRYNIINKHNPLIHIINK*
Ga0126309_100673482	3300010039	Serpentine Soil	MFPIKRLVKIKEELHRYYLQIITFQNEDPHYQEIAAKFSKNLSELEDVIEYIKKYNNNKKNNPLIHIFK*
Ga0126309_103849561	3300010039	Serpentine Soil	MFPIKRVEKIHEELYHYYLQIITFQNGDPQYQDIATKFSKNLSELDSIIEDIRLYNNNSKNNPLIHIFK*
Ga0126312_113594151	3300010041	Serpentine Soil	MFPIKRLEKMYQELHRYYLQVITYQNEDPKYQDIATKLSKNLSELEDVIRDIRRYNIINKHNPLIHIINK*
Ga0126306_118981161	3300010166	Serpentine Soil	MFPIKRLEKIHEELHHYYSQIITFQNEDSQYQDIATKFSKNLSELEDIIEDIRL
Ga0134127_130923091	3300010399	Terrestrial Soil	MFPVKRLEKMHEELERYYLQAVTYPKAEPNYLYIANKLSKNLSELDSIIKDIRKYNYNNKNNTLIHIINK*
Ga0157305_100790722	3300012891	Soil	MFPVKRLEKMHEELENYYLQVITYPKADPNYLYVANKLSKNLSELDSIIKDIRKYNYINKNNPLIHIINK*
Ga0157371_111781291	3300013102	Corn Rhizosphere	MFPVKRLEKMHEELYRYYLQVITYQNEDPKYHNIATKLSKNLSELDDIIKDIRIYNY
Ga0132258_113895063	3300015371	Arabidopsis Rhizosphere	MFPVNRLEKIHEELYIYYLQVITYPKAEPKYQEIASKLSKNISELDGI
Ga0184624_102542021	3300018073	Groundwater Sediment	MFPVKRLEKMHEELERYYLQAITYPKAEPNYLYIANKLSNNLSELDSIIKDIRKYNYNNNNNPLIHIINKLLYTIYFFY
Ga0190269_106514421	3300018465	Soil	MFPIKTLDKINEELYRYYLQIITFQNEDPHYQDIAAKFSKNLSELEDVIEDIKKYNNNKKNNPLIHIFK
Ga0190269_118664091	3300018465	Soil	MFPVKRLEQMHEELHRYYLQVITYPKAEPKYLEIATRLSKNLSELDGIIKDIRIYNYNNKNNPLIHIINK
Ga0190268_100059311	3300018466	Soil	MFPVKRLEKMHEELERYYLQVITYPKADPNYLYIANKLSKNLSELDSIIKDIRKYNYNNKNNPLIHIINK
Ga0190268_100205632	3300018466	Soil	MFPIKLLDKINEELYRYYLQIITFQNEDPHYQDIAAKFSKNLSELEDVIEDIKKYNNNKKNNPLIHIFK
Ga0190268_100907251	3300018466	Soil	MFPLQRLEKIQQELHRYYLQVITYQNEDPKYQDIATKLSKNLSELEDVIKDIIKYNINNKNNPLIHLINK
Ga0190268_101444522	3300018466	Soil	MFPLKGLEKIHEELHRYYLQVVTYQNEDQEYQDIVTKLSKNLSELEYTIKNIRKYNKNMKNQLIS
Ga0190268_106544871	3300018466	Soil	MFPIKTLDKINEELHRYYLQIITFQNEDPHYQEIAAKFSKNLSELEDVIVDIKKYNNN
Ga0190270_101089522	3300018469	Soil	MFPIKTLDKINEELHRYYLQIITFQNEDPHYQDIAAKFSKNLSELEDVIVDIKKYNNIKKNNPLIHIFK
Ga0190270_105038491	3300018469	Soil	MFPVKSLEKMHEELERYYLQAITYPKAEPNYLYIANKLSNNLSELDSIIKDIRKYNYNNKNNPLIHIINK
Ga0190270_106339641	3300018469	Soil	MFPVKRLEKMHEELERYYLQVITYPKADPNYLYIANKLSKNLSELDSIIKDIRKYNYNNKNNP
Ga0190274_102556852	3300018476	Soil	MFPIKTLDKINEELYRYYLQIITFQNEDPHYQDIAAKFSKNLSELEEVIEDIKKYNNNKKNNPLIHIFK
Ga0190271_109952252	3300018481	Soil	MFPVKRLEKMHEELERYYLQAITYPKAEPNYLYIANKLSKNLSELDSIIKDIRKYNYINKNNPLIHIINK
Ga0190271_114128663	3300018481	Soil	MFPVKRLEKMHEELERYYLQVITYPKEYPNYLYIANKLSKNLSELDSIIKDIRKYNYNNKNNPLIHIINK
Ga0190271_116766531	3300018481	Soil	MFPIKTLDKINEELHRYYLQIITFQNEDPHYQEIAAKFSKNLSELEDVIVDIKKYNNNKKNNPLIHIFK
Ga0173481_100321022	3300019356	Soil	MFPVKRLEKMHEELYRYYLQVITYQNEDPKYHNIATKLSKNLSELDDIIKDIRIYNYNNKNNLLIHIIKK
Ga0190267_100058164	3300019767	Soil	MFPIKTLDKINEELHRYYLQIITFPNEDPHYQDIAAKFSKNLSELEDVIVDIKKYNNNKKNNPLIHIFK
Ga0193741_10007529	3300019884	Soil	MFPIKTLDKINEELHRYYLQIITFQNEDPHYQDIAAKFSKNLSELEDVIVDIKKYNNNKKNNPLIHIFK
Ga0196962_100027378	3300024430	Soil	MFPLKGLEKIHEELYRYYLQVITYQNEDQEYQVIATKLSKNLSELEYIIKYIRKYNKNIKNQLIN
Ga0196962_101908371	3300024430	Soil	PVKRLEQTHEELHRYYLQVITYPKADPNYLYIATKLSKNLSELDSIIKVIKRYNYNNKNNPLIHIINK
Ga0210061_10133242	3300025537	Natural And Restored Wetlands	MFPLKGLEKIHEELHCYYLQVVTYQNEDQKYQDIVTKLSKNLSELEYTIKNIRKYNKNIENQLIS
Ga0210087_10523731	3300025559	Natural And Restored Wetlands	MFPVKRLEIMHEELERYYLQAITYPKAEPNYQYIANKLSKNLSELDSIIKDIRKYNYNNKNNPLIHIINK
Ga0210087_10542831	3300025559	Natural And Restored Wetlands	MFPLKGLEKIHEELHRYYLQVVTYQNEDQKYQDIVTKLSKNLSELEYTIKNIRKYNKNIENQLIS
Ga0210076_10469382	3300025567	Natural And Restored Wetlands	MFPLKGLEKIHEELHRYYLQVVTYQNEDQKYQDIVTKLSKNLSELDSIIKNIRKYNYNNKNNPLIDIINK
Ga0209982_10869401	3300027552	Arabidopsis Thaliana Rhizosphere	MFPVKRLEKMHEELERYYLQVVTYPKADPNYLYIANKLSKNLSELDSIIKDIRKYNYINKNNPL
Ga0209818_12948431	3300027637	Agricultural Soil	MFPIKRLEKIQEELHRYYLQVIAFQNNNPQYQDIATKFSRNLSELEDIIEDIRIYNNNSKNNPLIHIFK
Ga0209077_11181871	3300027675	Freshwater Sediment	MFPLQRLEKIHEELHRYYLQVITYQNEDPKYQDIATKLSKNLSELEDVIKDIRKYNINNKNNPLINIINK
Ga0209819_101017443	3300027722	Freshwater Sediment	MFPIKTLDKINEELHRYYLQIITFQNEDPHYQEIAAKFSKNLSELEDVIVDIKKYNNNKKNNPLLHIFK
Ga0209593_101618031	3300027743	Freshwater Sediment	MFPVKKLEKMHEELERYYLQAVTYPKAEPNYLYIANKLSKNLSELDSIIKDIRRYNYNNKNNTLIHIINK
Ga0209974_103234981	3300027876	Arabidopsis Thaliana Rhizosphere	MSPVKRLEKMHEELENYYLQVITYPKADPNYLYVANKLSKNLSELDSIIKDIRKYNYINK
Ga0209481_101559201	3300027880	Populus Rhizosphere	MFPVKRLETMQEELHRYYLQVITYQNEDPKYQDIATKFSKNLSELDSIIKDIRIYNYNNKKNPLIHIINK
Ga0209486_106990701	3300027886	Agricultural Soil	MFPLQRLEKIHEELHRYYLQVITYQNEDPNYQDIATKLSKNLSELEAVIKDIRKYNTNNKKNPLIHIINK
Ga0207428_104134061	3300027907	Populus Rhizosphere	MFPVKRLEKMHEELYRYYLQVITYQNEDPKYHNIATKLSKNLSELDNIIKDIRIYNYNNKNNLLIHIIKK
Ga0209382_100381053	3300027909	Populus Rhizosphere	MFPVKRLEKMHEELERYYLQVVTYPKADPNYLYIANKLSKNLSELDSIIKDIRKYNYNNKNNPLIHIINK
Ga0209382_111307241	3300027909	Populus Rhizosphere	MFPVKRLEKMHEELENYYLQVITYPKADPNYLYVANKLSKNLSELDSIIKDIRKYNYINKNNPLIHIINK
Ga0310887_101425822	3300031547	Soil	MFPVKRLEKMHEELERYYLQVVTYPKADPNYLYIANKLSKNLSELDSIIKNIRKYNYNNKNNPLIHIINK
Ga0310887_111012261	3300031547	Soil	MHEELENYYLQVITYPKADPNYLYVANKLSKNLSELDSIIKDIRKYNYINKNNPLIHIIN
Ga0310892_100866162	3300031858	Soil	MFPVKRLEKMHEELERYYLQAVTYPKAEPNYLYIANKLSKNLSELDSIIKDIRKYNYINKNNPLIHIINK
Ga0310900_112118681	3300031908	Soil	MFPVKRLEKMHEELERYYLQAVTYPKAEPNYLYIANKLSKNLSELDSIIKDIRKYNYNNKNNTLIHIINK
Ga0310903_105584801	3300032000	Soil	LERYYLQAVTYPKAEPNYLYIANKLSKNLSELDSIIKDIRKYNYINKNNPLIHIINK
Ga0307411_110203851	3300032005	Rhizosphere	MFPVKRLEKMYEELECYYLQVVTYPKADPNYLYIANKLSKNLSELDSIIEDIRIYNNNSKNNPLIHIFK
Ga0310902_110738502	3300032012	Soil	MHEELERYYLQAVTYPKAEPNYLYIANKLSKNLSELDSIIKDIRKYNY
Ga0310899_103116361	3300032017	Soil	MFPVKRLEKMHEELERYYLQVVTYPKADPNYLYIANKLSKNLSELDSIIKDIRKYNYINKNNPLIHIINK
Ga0310890_101267652	3300032075	Soil	MHEELENYYLQVITYPKADPNYLYVANKLSKNLSELDSIIKDIRKYNYINKNNPLIYIIN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091564

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences