Metagenome / Metatranscriptome Family F091652

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091652
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	152 residues
Representative Sequence	FEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPSGSRFLTLDGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Number of Associated Samples	91
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	98.13 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.364 % of family members)
Environment Ontology (ENVO)	Unclassified (28.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.729 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.36% β-sheet: 47.02% Coil/Unstructured: 47.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
b.123.1.1: Hypothetical protein TM1070	d1nc7a1	1nc7	0.76
b.123.1.0: Hypothetical protein TM1070	d2iiaa_	2iia	0.7
b.29.1.0: Concanavalin A-like lectins/glucanases	d5gm0a2	5gm0	0.63
b.14.1.0: Calpain large subunit, middle domain (domain III)	d1dkva5	1dkv	0.62
b.18.1.30: Galactose-binding domain-like	d4v0fa1	4v0f	0.62

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12867	DinB_2	5.61
PF00005	ABC_tran	2.80
PF00042	Globin	0.93
PF00535	Glycos_transf_2	0.93
PF00881	Nitroreductase	0.93
PF09899	DUF2126	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	99.07 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	96.26 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	96.26 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	96.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.80 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102351242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	633	Open in IMG/M
3300004081\|Ga0063454_101607225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300004479\|Ga0062595_101436451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300005167\|Ga0066672_10218165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1220	Open in IMG/M
3300005176\|Ga0066679_10460099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	832	Open in IMG/M
3300005177\|Ga0066690_10551450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	772	Open in IMG/M
3300005181\|Ga0066678_10051753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2344	Open in IMG/M
3300005181\|Ga0066678_10204685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1262	Open in IMG/M
3300005181\|Ga0066678_10802733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	622	Open in IMG/M
3300005332\|Ga0066388_106574646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300005332\|Ga0066388_107630329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300005435\|Ga0070714_100970997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	826	Open in IMG/M
3300005439\|Ga0070711_100983468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300005467\|Ga0070706_100746313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	907	Open in IMG/M
3300005468\|Ga0070707_100756650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	935	Open in IMG/M
3300005526\|Ga0073909_10098008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1154	Open in IMG/M
3300005534\|Ga0070735_10417810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	802	Open in IMG/M
3300005537\|Ga0070730_11050789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300005537\|Ga0070730_11055030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300005542\|Ga0070732_10780237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300005556\|Ga0066707_10251082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1154	Open in IMG/M
3300005560\|Ga0066670_10496664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	750	Open in IMG/M
3300005598\|Ga0066706_10135381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1836	Open in IMG/M
3300005764\|Ga0066903_103241617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	880	Open in IMG/M
3300005764\|Ga0066903_105186248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	690	Open in IMG/M
3300005841\|Ga0068863_102559205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	519	Open in IMG/M
3300006028\|Ga0070717_10728734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	901	Open in IMG/M
3300006162\|Ga0075030_100965786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	671	Open in IMG/M
3300006162\|Ga0075030_101316865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300006800\|Ga0066660_10690373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	840	Open in IMG/M
3300007255\|Ga0099791_10433792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	634	Open in IMG/M
3300009012\|Ga0066710_104126846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300009038\|Ga0099829_11247674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300009088\|Ga0099830_10320567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1241	Open in IMG/M
3300009090\|Ga0099827_11930726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	514	Open in IMG/M
3300009098\|Ga0105245_13078624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300009137\|Ga0066709_100031492	All Organisms → cellular organisms → Bacteria	5634	Open in IMG/M
3300009137\|Ga0066709_103235240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	593	Open in IMG/M
3300009156\|Ga0111538_11836188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	763	Open in IMG/M
3300009174\|Ga0105241_11985272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300010038\|Ga0126315_10624078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	698	Open in IMG/M
3300010048\|Ga0126373_13226849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300010152\|Ga0126318_10566544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	680	Open in IMG/M
3300010166\|Ga0126306_10947901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300010358\|Ga0126370_11320199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	677	Open in IMG/M
3300010359\|Ga0126376_10851812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	896	Open in IMG/M
3300010366\|Ga0126379_10932101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	972	Open in IMG/M
3300010371\|Ga0134125_11301891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	793	Open in IMG/M
3300010376\|Ga0126381_103036426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	666	Open in IMG/M
3300010398\|Ga0126383_10208519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1883	Open in IMG/M
3300010403\|Ga0134123_13276252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300011269\|Ga0137392_11379981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	564	Open in IMG/M
3300011270\|Ga0137391_10389581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1192	Open in IMG/M
3300011270\|Ga0137391_11131928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	630	Open in IMG/M
3300011271\|Ga0137393_11453040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	575	Open in IMG/M
3300012096\|Ga0137389_10322442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1310	Open in IMG/M
3300012096\|Ga0137389_10712599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	862	Open in IMG/M
3300012203\|Ga0137399_11494601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	563	Open in IMG/M
3300012206\|Ga0137380_11745748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300012207\|Ga0137381_11705217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300012209\|Ga0137379_11172212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	675	Open in IMG/M
3300012210\|Ga0137378_10250842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1647	Open in IMG/M
3300012211\|Ga0137377_11103658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300012212\|Ga0150985_101325932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1123	Open in IMG/M
3300012212\|Ga0150985_120056943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	869	Open in IMG/M
3300012212\|Ga0150985_121205087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	645	Open in IMG/M
3300012349\|Ga0137387_11240074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300012349\|Ga0137387_11274949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300012350\|Ga0137372_11217792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300012360\|Ga0137375_10227473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1741	Open in IMG/M
3300012363\|Ga0137390_10742958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	941	Open in IMG/M
3300012469\|Ga0150984_106584247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	927	Open in IMG/M
3300012925\|Ga0137419_10190978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1510	Open in IMG/M
3300012927\|Ga0137416_10955349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	764	Open in IMG/M
3300012971\|Ga0126369_11780179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	705	Open in IMG/M
3300012971\|Ga0126369_13540173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300013297\|Ga0157378_12425711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	576	Open in IMG/M
3300013297\|Ga0157378_13154183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300014052\|Ga0120109_1150266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300014487\|Ga0182000_10609645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300014488\|Ga0182001_10203135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300015372\|Ga0132256_102706083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300015374\|Ga0132255_105719747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300018433\|Ga0066667_12336507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300018468\|Ga0066662_11236889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	759	Open in IMG/M
3300018482\|Ga0066669_12313028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300021362\|Ga0213882_10101941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1163	Open in IMG/M
3300021374\|Ga0213881_10377635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300021384\|Ga0213876_10255641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	931	Open in IMG/M
3300021384\|Ga0213876_10669029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300021388\|Ga0213875_10435887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300021470\|Ga0194051_1224667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300021560\|Ga0126371_12303564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	651	Open in IMG/M
3300025910\|Ga0207684_10701320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	860	Open in IMG/M
3300025910\|Ga0207684_11712796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300025922\|Ga0207646_10591973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	996	Open in IMG/M
3300026315\|Ga0209686_1124015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	855	Open in IMG/M
3300026331\|Ga0209267_1139338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1009	Open in IMG/M
3300026529\|Ga0209806_1135095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	969	Open in IMG/M
3300026542\|Ga0209805_1072718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1671	Open in IMG/M
3300027787\|Ga0209074_10554149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300027857\|Ga0209166_10486288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300027862\|Ga0209701_10276699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	972	Open in IMG/M
3300027882\|Ga0209590_10388821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	900	Open in IMG/M
3300031093\|Ga0308197_10234315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	643	Open in IMG/M
3300031472\|Ga0272437_1215306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	996	Open in IMG/M
3300031954\|Ga0306926_11402264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	811	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.98%
Host-Associated	Host-Associated	14.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.24%
Plants	Host-Associated → Plants	14.02%
Aquatic	Environmental → Aquatic	3.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.67%
Roots	Host-Associated → Plants → Roots	2.80%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Sediment	Environmental → Aquatic → Sediment	1.87%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.87%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.36%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.80%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.87%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.93%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021470	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-20m	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1023512422	3300000956	Soil	ERGITSSHEKFGLTVPAVGGYWTVPNVQDSDDYRVHLAITNLDERPYTSTITLKDADGAALDTTVDLPRNGSRFVSLTELFDGAADFLSGRPGVLYFGNNHQPAMYYYFVANQRLGTWRAQHL*
Ga0063454_1016072251	3300004081	Soil	HGLTSSHEKYGISIPAVGGYWTVPNVQDSADYSVRLAVTNLDSVPYRSEVTLKDDEAHAIHATVDLPPNGSRFLRLDELFTNPRGFLHDRAGVLYFGNNRQPAMYYYFVLNQRLGTWRAQHL*
Ga0062595_1014364511	3300004479	Soil	ERGLTSSHEKFGLTIPAVGGYWTVPNVQDSDDYRVHLAVTNLDERPYTSSITLKDEAGSALETTVQLPPNGSRFLSLDALFDDPAAFLGGRPGVLYFGNNRQPAMYYYFVANQRLGTWRAQHL*
Ga0066672_102181651	3300005167	Soil	LHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDDYRVFLAVANLDTQTYISDVTLKDDEGHALDAQVELPPNGSRFLSLETLFQNPRGFLHNRPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066679_104600991	3300005176	Soil	RRGHVQSGQVTIDFEGPQLGSSRAYLHWYNARSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVFLAVANLDARSYVSDVTLKDDEGHSLHAEVELPPNGSRFLSLDALFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066690_105514502	3300005177	Soil	SHEKFGLTIPAVGGYWTVPNVQDSDDYRVFLAVANLDARSYVSDVTLKDDEGHSLHAEVELPPNGSRFLSLDALFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066678_100517531	3300005181	Soil	GAQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVFLAVANLDTQTYISDVTLKDDEGHALDAQVELRPNGSRFLSLETLFQNPRGFLHNRPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066678_102046851	3300005181	Soil	RGQVQSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVYLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066678_108027331	3300005181	Soil	QRRFSLQRNGSLALELGELLPPARRGHIQSGQITMDFEGQQLGSSRAYLHWYNARSLTSSHEKFGLTIPAVGGYWTVPNIRDSDDYRVFLAVANLDARSYVSDVTLKDDEGHALHAQVELPPNGSRFLSLDALFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066388_1065746462	3300005332	Tropical Forest Soil	QLGSSRAYLHWYNERCLTSSHEKFGLTIPAVAGYWTVPNVQDNDEYRVHLAVTNLDEQHYTSKVILKDAEGHAQEASLELPPRGSRFVGLSDVFKTPAAFLDRRPGVLYFGNNHQPAMYYYFVSNPRLGTWRAQHL*
Ga0066388_1076303291	3300005332	Tropical Forest Soil	APQACGPTSLRISLLDQDGAPVASKRVRLNRNASVVLELGELLPLAQRRNLPSGQVMVDFEGPQLGSSRAYLHWYNARSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVTNLDAQSYASDVILKDDEGHELRAQVWLPPNGSRFAALPELVQDPRGFLHDRPGVLYFGNNRQPA
Ga0070714_1009709971	3300005435	Agricultural Soil	NQCSPISLLVTLLDQAGRLLASRRVRLARNASVVLELGEMLPRDRRAAVASGQVLIDFEGPQLGSSRAYLHWYNERSLTSSHEKFGLTIPAVGGYWTVPDVRDSDEYRVHLAVTNLENQPYASEVTLKDDEGHALRAQVWLPPNGSRFVRLGDLFQNPSAFLHDQPGVLYFGNNRQAAMYYYFVHNARLGTWRAQHL*
Ga0070711_1009834682	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AARRGRAPSGQLVVDFEGPQLGSSRAYLHWYNERSLTSSHEKFGLTIPAVGGYWTVPDVRDSDEYRVHLAVTNLENQPYASEVTLKDDEGHALRAQVWLPPNGSRFVRLGDLFQNPSAFLHDQPGVLYFGNNRQAAMYYYFVHNARLGTWRAQHL*
Ga0070706_1007463132	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	WYNDRGVTSSHEKFGKTIPAVGGYWTVPNVEDSEEYRVYLAVANLDERPYLSDVTLKDDEGHELNAEVELAPGGSRFLSLDGLFNNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0070707_1007566502	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SLGRNASLVLEIGDLLPQERRDHVESGQILIDFEGPQLGSSRAYLHWYNDRSLTSSHEKYGLTIPAVGGYWTVPNVQDNDDYRVYLAVTNLDARPYLSDVTLKDDEGHALHAVVELPPNGSRFVRLDTLFENPRGFLHDQPGVLYFGNNRQPAMYYYFVQNERLGAWRVQHL*
Ga0073909_100980081	3300005526	Surface Soil	SSRAYLHWYNERGLTSSHEKFGLTIPAVGGYWTVPNVQDSDQYRVHLAVTNLDARPYTSTITLKDQAGQAVETTVELAPNGSRFLGLDTLFEDPAGFLAGRPGVLYFGNNRQPAMYYYFVANQRLGTWRAQHL*
Ga0070735_104178101	3300005534	Surface Soil	SHEKFGLTIPAVGGYWTVPNVEDTDEYRVHLAVTNLDAHWYVSDLTLKDDEGHALHAEIGLPPNGSRFVALNELFQNPRGFLHDRPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0070730_110507891	3300005537	Surface Soil	RAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNAEYRVHLAVTNLDSRPYTSDVTLKDDEGHALHTEVELPPNGSRFLTLDGLFQNPHGFLHDQPGVLYFGNNRQPAMYYYFVQNTRLGTWRAQHL*
Ga0070730_110550301	3300005537	Surface Soil	IIDFEGEQLGSSRAYLHWYNERSLTSSHEKFGLTIPAVGGYWTVPDVRDSDDYRVYLAVTNLDSQPYISDVTLKDDEGHELNAELELPPGGSRFAPLDMLFQNPRGFLHERPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0070732_107802372	3300005542	Surface Soil	FEGSQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDDYRVHLAITNLDAQPYLSDVVLKDDEGHELETQVWLPPNGSRFVALDGLFENSRGFLHGQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066707_102510822	3300005556	Soil	QFALKRNASLVLEVRDLLPAQHRGHVQSGQITLDFGGAQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVFLAVANLDTQTYISDVTLKDDEGHALDAQVELRPNGSRFLSLETLFQNPRGFLHNRPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066670_104966641	3300005560	Soil	ALELGDLLPAAQRGHVQSGQVTIDFEGPQLGSSRAYLHWYNARSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVFLAVANLDARSYVSDVTLKDDEGHSLHAEVELPPNGSRFLSLDALFQNPRGFLHERPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066706_101353811	3300005598	Soil	LHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVFLAVANLDTQTYISDVTLKDDEGHALDAQVELRPNGSRFLSLETLFQNPRGFLHNRPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066903_1032416172	3300005764	Tropical Forest Soil	YMHWYNARSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLALTNLDERAYVSDVTLKDDEGHALEASVWLPPNGSRFVALDALFDKVREFLHGQPGVLYFGNNQQPAMYYYFVQNRRLGTWRGQHL*
Ga0066903_1051862481	3300005764	Tropical Forest Soil	LTSSHEKYGLTIPAVGGYWTVPNVQDNDEYRVHLAVTNLDERPYRSDLMLKDDEGHALRTSVELPPNGSRFLTLDDLFQNPRGFLHERPGVLYFGNNRQPAMYYYFVQNLRLGTWRAQHL
Ga0068863_1025592051	3300005841	Switchgrass Rhizosphere	VDFEGPQLGSSRAYLHWYNERGLTSSHEKFGLTIPAVGGYWTVPNVQDSDQYRVHLAVTNLDAQPYTSTITLKDQAGQAVETKLELAPNGSRFLGLDTLFEDPAGFLAGRPGVLYFGNNRQPAMYYYFVANQRLGTWRAQHL*
Ga0070717_107287341	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDSDDYRVHLALTNLDARAYVSDVTLKDDEGHALEASVWLPPNGSRFVALDALFDNVRGFLHDEPGVLYFGNNRQPAMYYYFVQNLRLGTWRGQHL*
Ga0075030_1009657861	3300006162	Watersheds	LGSARAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDGDEYRVYLAVTNLDGQSYTSDVTLKDNEGHGLHTQVELAPNGSRFLGLDSLFQNPKGFLHDEPGVLYFGNNRQPAMYYYFVLNQRLGTWRVQHL*
Ga0075030_1013168651	3300006162	Watersheds	VRDLLPVARRGYVESGQVAIDFEGAQLGSARAYLHWYNERSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVTNLDTTRYTSDITLKDSEGHALNTSVDLPPNGSRFLSLPSLFHDPSGFLDRKPGVLYFGNNHQPAMYYYFVQNARLGTWRVQHL*
Ga0066660_106903732	3300006800	Soil	TTLLDQDGGKLASRRFELGRNASLVLELRDLLPAERRGKLHSGQVLMDFEGPQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDSDAYRVHLAVANLDSRPYTSDLTLKDDEGHALQTEVELPPNGSRFLTLDGLFSNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNTRLGTWRAQHL*
Ga0099791_104337922	3300007255	Vadose Zone Soil	HSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVYLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066710_1041268461	3300009012	Grasslands Soil	KFGLTIPAVGGYWTVPNVQDSEDYRVHLAITNLDEQPYTSTITLKDADGAALEATVGLPRNGSRFVSLTELFDDPAAFLAGRPGVLYFGNNHQPAMYYYFVANQRLGTWRAQHL
Ga0099829_112476742	3300009038	Vadose Zone Soil	VLELSDLLPTQRRGQVHSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVHLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFANPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0099830_103205671	3300009088	Vadose Zone Soil	LHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNEEYRVYLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFANPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRRGTWRAQHL*
Ga0099827_119307261	3300009090	Vadose Zone Soil	SASRRFDLGRNASLVVELRNLLPEDHRGQMESGQVIVDFEGAQLGSSRAYLHWYNERSLTSSHEKYGLTIPAVGGYWTVPNVQDNDDYRVHLAVTNLDSHAYTSDVTLKDDEGHALHTSVTLPPNGSRFLRLDTVFDNLRGFLHDQPGVLYFGNNRQPAMYYYFVQNERLG
Ga0105245_130786242	3300009098	Miscanthus Rhizosphere	PQLGSARAYLHWYNAHSLTSSHEKFGLTMPAVGGYWTVPNVQDSDEYRVYLAVTNLDARPYTSDITLKDSEGHALHASVELAPNGSRFLSVAGLFQDMRGFLDRQPGVLYFGNNHQPAMYYYFVQNERLGTWRVQHL*
Ga0066709_1000314921	3300009137	Grasslands Soil	SLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVFLAVANLDTQTYISDVTLKDDEGHALDAQVELRPNGSRFLSLETLFQNPRGFLHNRPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0066709_1032352401	3300009137	Grasslands Soil	GALLQPARGGHIQSGQITMDFEGQQLGSSRAYLHWYNARSLTSSHEKFGLTIPAVGGYWTVPNIRDSDDYRVFLAVANLDARSYVSDVTLKDDEGHALHAQVELPPNGSRFLSLDALFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0111538_118361881	3300009156	Populus Rhizosphere	GSSRAYLHWYNERALTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVTNLDERPYVSTIALKDEAGHAVETTVELAPNGSRFLRLDALFDEPAAFLAGRPGVLYFGNNRQPAMYYYFVANQRLGTWRAQHL*
Ga0105241_119852721	3300009174	Corn Rhizosphere	RNGSLVLELHELLPAARRGHVMSGQVIVDFEGGQLGSSRAYLHWYNERCLTSSHEKFGLTIPAVGGYWTVPNVQDTDEYRVHLAITNLDQRPYVSDVTLKDDEGHQLEAQVWLPPNGSRFIALDTLFANPRGFLHEKPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0126315_106240781	3300010038	Serpentine Soil	LMDQDGARLGSRRFSLPRNASMVLELRELLPATRRGHVSSGQVQIDFEGPQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNIQDSEDYRVHLAVTNLDDHTYMSEVTLKDDEGHALETTVALPPNGSRFVSLDDLFENPHGFLHGQPGVLYFGNNRQPAMYYYFVRNERLGTWRAQHL*
Ga0126373_132268491	3300010048	Tropical Forest Soil	LLPAKKRSHLLSGQVIIDFEGPQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVSDNDEYRVHLAVTNLDARPYISDVTLKDDEGHELNTQLELPPNGSRFAALDALFNNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNPRLGTWRAQHL*
Ga0126318_105665441	3300010152	Soil	RIQGRIESGQMIADFEGQQLGSSRAYLHWYNDRSLTSSHEKFGLAIPAVAGFWTVPNVHESDEYRVHLALANLEAAPYLSEVTLKDDEGHALDAQVWLPPNGSRFVSLAQLFPDARAFLHEQPGVLYFGNNRQAAMYYYFVQNQRLGTWRAQHL*
Ga0126306_109479011	3300010166	Serpentine Soil	ICATKRFELARNASLVLELTDLVPPRLRGEVPSGLVHIDFEGPQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDTDDYRVCLAVCNLDEWTYTSELSLTDDEGHVLRAHLELAPNGSRFLRLDELFQDPRGFLHGQPGALYFGNNRQPAMYYYFVRNERLGTWRAQHL*
Ga0126370_113201992	3300010358	Tropical Forest Soil	ASVVVELGEHLPAERRGRMQSGQVIADFEGAQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPYVQDSDDYRVHLAITNLDARAYMSDVTLKDDEGHQLQTEVWLPPNGSRFVALDALFENPRGFLHGQPGVLYFGNNRQPAMYYYFVENRQLGTWRAQHL*
Ga0126376_108518121	3300010359	Tropical Forest Soil	ASLVLRLLDANGARLYEQRHAIARNASLVLELRELLPAERRNNVPSGQVQMGFESQHLGSSRAYLHWYNAHGLTSSHEKYGVTVPAVGGYWTVPNVQDSDEYSVRLAVTNLDTAPYSSDLTLKDDESHELHARVDLPPNGSRFLRLDELFGNPRGFLHGQPGVLYFGNNRQPAMYYYFVYNARNQTWRAQHL*
Ga0126379_109321012	3300010366	Tropical Forest Soil	GHVMSGQVRIDFEGPQLGSSRAYLHWYNERGLTSSHEKFGLSIPAVGGYWTVPNVQDSDDYRVHLAITNLDERPYTSTITLKDADGAALDTTLDLPRNGSRFVSLTELFDGAADLLSGRPGVLYFGNNHQPAMYYYFVANQRLGTWRAQHL*
Ga0134125_113018911	3300010371	Terrestrial Soil	ELGRNASVVLELGDLLPATSRANVHSGQVVADFEGPQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPDVQDSDEYRVHLAVTNLDDKPYVSDVTLKDDEGHALEAQVWLPPNGSRFVSLDGLFENPRGFLHDRAGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0126381_1030364261	3300010376	Tropical Forest Soil	GQLLADFEGRQLGSSRAYLHWYNARSLTSSHEKFGLTIPAVGGYWTVPNVQDTDEYRVHVAVVNLDAQPYVSDVILKDNDGHELRAQVWLPASGSRFVALNELFQDPHGFMGERPGVLYFGNNRQPAMYYYFVRNQRMGTWRAQHL*
Ga0126383_102085191	3300010398	Tropical Forest Soil	TAAYFADLLPPARRGHVMSGQVRIDFEGPQLGSSRAYLHWYNERGLTSSHEKFGLSIPAVGGYWTVPNVQDSDDYRVHLAITNLDERPYTSTITLKDADGAALDTTLDLPRNGSRFVSLTELFDGAADLLSGRPGVLYFGNNHQPAMYYYFVANQRLGTWRAQHL*
Ga0134123_132762522	3300010403	Terrestrial Soil	SRAYLHWYDAHRLTSSHEKFGLTIPAVGGYWTVPNVQDNDDYRVYLAVTNLDTRPYTSDVTLKDDEAHELNTQVELPPNGSRFLRLDALFQNPSGFLHGQPGVLYFGNNRQPAMYYYFIQNQRLGTWRAQHL*
Ga0137392_113799811	3300011269	Vadose Zone Soil	VLELHELLPGPRRGHVQSGQVVADFEGAQLGSSRAYLHWYNEHSVTSSHEKFGRTIPAVGGYWTVPNVQDSDEYRVYLAVTNLDRRPYTSDVTLKDDEGHELNTEVELPPNGSRFLTLGGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137391_103895811	3300011270	Vadose Zone Soil	TKRFEIGRNASLVLELSDLLPTQRRGQVQSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVHLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPYGSRFLTLDGLFANPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137391_111319282	3300011270	Vadose Zone Soil	DRCLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVANLDAESYISEILLKDDEGHALETQIELAPGGSRFLSLDTLFKNPRGFLHGQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137393_114530401	3300011271	Vadose Zone Soil	TSVLISLLDQHGGGLATRRFEIGRNASLVLELSDLLPTQRRGQVHSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVHLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQH
Ga0137389_103224421	3300012096	Vadose Zone Soil	RSLATKRFEIGRNASLVLELSDLLPTQRRGQVQSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNEEYRVYLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFANPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRRGTWRAQHL
Ga0137389_107125991	3300012096	Vadose Zone Soil	SLTSSHEKFGLTIPAVGGYWTVPNVQDNDDYRVYLAVTNLDSRAYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVRNQCLGTWRA*
Ga0137399_114946012	3300012203	Vadose Zone Soil	QVQSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVEDNEDYRVHLAVTNLDTQPYLSDLTLKDDEGHALHTEVDLPSNGSRFLTLDGLFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137380_117457481	3300012206	Vadose Zone Soil	RNASIVVELHELLPSARQGHLQSGQVIVDFEGPQLGSSRAYLHWYNEHSLTSSHEKYGLVIPAVGGYWTVPNVQDSDDYRVHLAVTNLDRQPYTSDVTLKDDEGHELNTQLELPPNGSRFVALDALFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQH
Ga0137381_117052171	3300012207	Vadose Zone Soil	ARNASIVVELHELLPSARQGHVQSGQVIVDFEGPQLGSSRAYLHWYNEHSLTSSHEKYGLVIPAVGGYWTVPNVQDSDDYRVHLAVTNLDRQPYTSDVTLKDDEGHELNTQLELPPNGSRFVALDALFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137379_111722121	3300012209	Vadose Zone Soil	TPVRLTLLDQEGISVGSKRYELARNASIVVELHELLPSARQGHLQSGQVIVDFEGPQLGSSRAYLHWYNEHSLTSSHEKYGLVIPAVGGYWTVPNVQDSDDYRVHLAVTNLDRQPYTSDVTLKDDEGHELNTQLELPPNGSRFVALDALFQNPRGFLHQQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137378_102508421	3300012210	Vadose Zone Soil	NASLVLELGELVPAQQRGQIQSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDDDDYRVYLAVTNLDSRAYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137377_111036581	3300012211	Vadose Zone Soil	LATRRFEIARNASLVLELGDLLPAPQRGQVQSGAVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVYLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0150985_1013259321	3300012212	Avena Fatua Rhizosphere	DFEGAHLGSSRAYLHWYNERGLTSSHEKYGISIPAVGGYWTVPNVQDNANYSVRLAVTNLDSAPYRSEVTLKDDEAHALHATVDLPPNGSRFLRLDELFADPHGFLHEQPGVLYFGNNRQPAMYYYFVLNQRLGTWRAQHL*
Ga0150985_1200569431	3300012212	Avena Fatua Rhizosphere	EAPQLCHTASVVVRLFDAAGAPRFQQRYAIARNGSLVLELGSLLPTHARNRTESGQVQVDFEGHHLGSSRAYLHWYNARSLTSSHEKFGVTIPAVGGYWSVPNVQDADDYSVRLAITNLDSASFTSQVVLKDDESHALQASVELPPNGSRFVRLDELFPDPRGFLHDRPGVLYFGNNQQPAMYYYFVLNQRLGTWRAQHL*
Ga0150985_1212050871	3300012212	Avena Fatua Rhizosphere	EKFGLTIPAVGGYWTVPNVQDSEDYRVHLAVTNLDERPYTSTITLKDDAGQAVETTVELAPNGSRFLRLDTLFDDPARFLAGRPGVLYFGNNHQPAMYYYFVANQRLGTWRAQHL*
Ga0137387_112400741	3300012349	Vadose Zone Soil	ELGDLLPAPQRGQVQSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVYLAVTNLDSQPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137387_112749491	3300012349	Vadose Zone Soil	LPSARQGHLQSGQVIVDFEGPQLGSSRAYLHWYNEHSLTSSHEKYGLVIPAVGGYWTVPNVQDSDDYRVHLAVTNLDRQPYTSDVTLKDDEGHELNTQLELPPNGSRFVALDTLFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137372_112177921	3300012350	Vadose Zone Soil	VDFEGAQLGSSRAYLHWYNEHSLTSSHEKYGLAIPAVGGYWTVPNVQDNDDYRVHLAVTNLDSHAYTSDVTLKDDEGHALHTSVELPPNGSRFLRLDSVFDNPRGFLHDRPGVLYFGNNRQPAMYYYFVQNARLGTWRAQHL*
Ga0137375_102274731	3300012360	Vadose Zone Soil	PTAHRGHVQSGLVRIDFEGPQLGSSRAYLHWYNERSLTSSHEKFGLTIPAVGGYWTVPNVQDTDEYRVHLAVTNLDQAGYTSQITLKDADGRARETSVQLPPNGSRFLRLDALFENPAEFLHGRPGVLYFGNNHQPAMYYYFVSNQSLGTWRAQHL*
Ga0137390_107429581	3300012363	Vadose Zone Soil	SGQVLIDFEGAQLGSSRAYLHWYNDKSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVFLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0150984_1065842472	3300012469	Avena Fatua Rhizosphere	WYNERGLTSSHEKFGLTIPAVGGYWTVPNVQDSEDYRVHLAVTNLDERPYTSTITLKDDAGQAVETTVELAPNGSRFLRLDTLFDDPARFLAGRPGVLYFGNNHQPAMYYYFVANQRLGTWRAQHL*
Ga0137419_101909783	3300012925	Vadose Zone Soil	EKFGLTIPAVGGYWTVPNVQDNDEYRVYLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL*
Ga0137416_109553491	3300012927	Vadose Zone Soil	SGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVYLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPSNGSRFLTLDGLFQNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAPHL*
Ga0126369_117801791	3300012971	Tropical Forest Soil	GSSRAYLHWYNARSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVTNLDARAYVSDMTLKDDEGHALEASVWLPPNGSRFLALDAVFANVRGFLHEQPGVLYFGNNRQPAMYYYFVENRRLGTWRGQHL*
Ga0126369_135401731	3300012971	Tropical Forest Soil	ELGELLPVAQRRNLPSGQVVADFEGAQLGSSRAYLHWYNARSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVTNLDAQSYASDVILKDDEGHELRAQVWLPPNGSRFAALPELVQDPRGFLHDRPGVLYFGNNRQPAMYYYFVHNQRLGTWRAQHL*
Ga0157378_124257111	3300013297	Miscanthus Rhizosphere	LCQPVTVNVRPFDAQGVAISARRFLLPRNASLILELHELLPAARQGKVESGQLQVDFEGTQLGSSRAYLHWYNERSLTSSHEKFGLTIPAVGGYWTVPNVQDSAEYQVNLAVVNLDRREYHSDIILKDDEGHSLHADVSLPPNGSRFLRLDALFSDPCGFLHDRPGVLYFGNNRQPAMDYYFIRNERLGTWR
Ga0157378_131541831	3300013297	Miscanthus Rhizosphere	AGDQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVHLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFIANTRLGTWRAQHL*
Ga0120109_11502661	3300014052	Permafrost	GVMVRLYDQEGTVEAARRFAIPRNASLVLEVGDLLPSGRRGHVPSGQVGIDFEGPQLGSARAYLHWYNERSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVYLAVTNLDSSPYTSDITLKDSEGHALHTTVDLPPNGSRFLSLAGLFHDVSGFLDRKPGVLYFGNNHQPAMYYYFVQN
Ga0182000_106096451	3300014487	Soil	GLPAGRGWAAAGGRRFRLERNASLVVELRDLLPERQRGRLASGQVRVDFEGQHLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVTNLDDRPYTSDLVLKSASGEVLQTSLTLPPNGSRFASLRDLFASPATFLNDQPGILYFGNNHQPAMYYYFV
Ga0182001_102031351	3300014488	Soil	LHWYNDRCLTSSHEKFGLTIPAVGGYWTVPNVQDADDYRVHLAITNLDAQPYSSTILLKDGDGAALETVVDVPPNGSRFLSLDRLFDDPRGFLNGGPGVLYFGNNRQPAMYYYFVQNQHLGTWRAQHL*
Ga0132256_1027060832	3300015372	Arabidopsis Rhizosphere	FEGPQLGSSRAYLHWYNERGLTSSHEKFGLTIPAVGGYWTVPNVQDSDDYRVHLAVTNLDERPYTSSITLKDEAGSALETTVQLPPNGSRFLSLDALFDDPAAFLGGRPGVLYFGNNRQPAMYYYFVANQRLGTWRAQHL*
Ga0132255_1057197471	3300015374	Arabidopsis Rhizosphere	QPITLLVSLFDADGSRVAAQRFSLQRNASLMLELAELLPSARRGHIQSGQVRVDFEGAQLGSSRAYLHWYNERGLTSSHEKFGLTIPAVGGYWTVPNVQDSDDYRVHLAVTNLDERPYTSSITLKDEAGSALETTVQLPPNGSRFLSLDALFDDPAAFLGGRPGVLYFGNNRQP
Ga0066667_123365071	3300018433	Grasslands Soil	AYLHWYNEHSLTSSHEKFGLTIPAVGGYWTVPNVQDSDAYRVHLAVANLDSRPYTSDLTLKDDEGHALHTEVELPSNGSRFLTLDSLFTNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Ga0066662_112368892	3300018468	Grasslands Soil	GSSRAYLHWYNERGLTSSHEKFGLTIPAVGGYWTVPNVHDSESYRVYLALVNLDEAPYTSTVVLKDADGQPLSATLALPAHGSRFVGLADLFADPAAHLAGRPGVLHFGNNRQPAMYYYFVHNQRLGTWRAQHL
Ga0066669_123130281	3300018482	Grasslands Soil	APSTVMVRLLNQDGAGVAEKRMRLDRNASVVLELGEMLPAASRGRIESGQVIADFEAPQLGSSRAYLHWYNERSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVTNLDGKPYASEVTLKDDEGHELKAQVWLPPNGSRFVSLQTLFDDARGFLHDQPGVLYFGN
Ga0213882_101019411	3300021362	Exposed Rock	GPQLGSSRAYLHWYNDRCLTSSHEKFGLTIPAVGGYWTVPNVEDSDEYRVHLAVTNLDSRPYTSTILLKDADGQALETTVEVPLNGSRFLRLDRLFAEPGVFLGGRPGVLYFGNNRQPAMYYYFVANQRLGTWRAQHL
Ga0213881_103776351	3300021374	Exposed Rock	TRLRLARNASAVVELGDVLPPQRRGHVDSGQVVADFEGPQLGSSRAYLHWYNDRSLTSSHEKYGLTIPAVGGYWTVPNVQDSEDYRVHLAIANLDSRAYVSDVTLKDDEGHQLQTEVWLPAFGSRFVALDGLFENPRGFLHGQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Ga0213876_102556411	3300021384	Plant Roots	GPQLGSSRAYLHWYNDRCLTSSHEKFGLTLPAVGGYWAVPDVRDSEDYRVHLAVTNLETQTYVSEVTLKDDEGHALRAQVWLPPNGSRFVSLGELFQNPNGFLHDQPGVLYFGNNSQAAMYYYFVHNARLGTWRAQHL
Ga0213876_106690291	3300021384	Plant Roots	VPIAAKRYGLGRNASLGLELRALLPPPRRGHIQSGMVHIDFEGPQLGSSRAYLHWYNDRCLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAITNLDSRPYTSTIVLKDADGQALETTVEVPLNGSRFLRLDRLFAEPGVFLGGRPGVLYFGNNRQPAMYYYFVANQRLGTWRAQHL
Ga0213875_104358871	3300021388	Plant Roots	EGPHLGSSRAYLHWYNDRCLTSSHEKFGLTIPAVGGYWTVPNIQDNDEYRVHLAVTNLDGRPYTSTMLLKDADGHSRETHVEVPLNGSRFLALDRLFEDVRGFLGDRPGVLYFGNNRQPAMYYYFVANQRLGTWRAQLL
Ga0194051_12246671	3300021470	Anoxic Zone Freshwater	LHWYNDRGITSTHEKFGLTIPAVGGSWTVPNVRHDERYRMHIAVVNLDAIPYHSSIILKNGVGTELETDVDLPVSGSQFLSLDALFAKPEVHLGGEPGIVYFGNNRQPAMYYYFVENRSLGTWRAQHL
Ga0126371_123035641	3300021560	Tropical Forest Soil	LPVEHRNNVPSGQVQMGFESQHLGSSRAYLHWYNAHSLTSSHEKYGVTIPAVGGYWTVPNVQDSDEYSVRLAVTNLDTAPYSSDLTLKDDESHELHARVDLPPNGSRFLRLDELFGNPRGFLHGQPGVLYFGNNRQPAMYYYFVHNARLGTWRAQHL
Ga0207684_107013201	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SSRAYLHWYNDRGVTSSHEKFGKTIPAVGGYWTVPNVEDSEEYRVYLAVANLDERPYLSDVTLKDDEGHELNAEVELAPGGSRFLSLDGLFNNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Ga0207684_117127961	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SLVLELHDLLPAQRRGQVHSGQVLIDFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNDEYRVYLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Ga0207646_105919732	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LATACAQWARSATLAGRRFSLGRNASLVLEIGDLLPQERRDHVESGQILIDFEGPQLGSSRAYLHWYNDRSLTSSHEKYGLTIPAVGGYWTVPNVQDNDDYRVYLAVTNLDARPYLSDVTLKDDEGHALHAVVELPPNGSRFVRLDTLFENPRGFLHDQPGVLYFGNNRQPAMYYYFVQNERLGAWRVQHL
Ga0209686_11240152	3300026315	Soil	AQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVFLAVANLDTQTYISDVTLKDDEGHALDAQVELRPNGSRFLSLETLFQNPRGFLHNRPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Ga0209267_11393382	3300026331	Soil	LKRNASLVLEVRDLLPPQHRGHVQSGQITLDFGGAQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVFLAVANLDTQTYISDVTLKDDEGHALDAQVELRPNGSRFLSLETLFQNPRGFLHNRPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Ga0209806_11350953	3300026529	Soil	RRFSIPRNASLILELSELLPARYRGNTASGQVVVDFEAAQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVFLAVANLDTQTYISDVTLKDDEGHALDAQVELRPNGSRFLSLETLFQNPRGFLHNRPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Ga0209805_10727183	3300026542	Soil	SSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDAYRVHLAVANLDSRPYTSDLTLKDDEGHALQTEVELPPNGSRFLTLDGLFSNPRGFLHEQPGVLYFGNNRQPAMYYYFVQNTRLGTWRAQHL
Ga0209074_105541491	3300027787	Agricultural Soil	IVVELGQLLPPPRRGRVQSGQVIADFEGPQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPDVQDSEDYRVHLAITNLDSRAYMSDVTLKDDEGHQLEAQVWLPANGSRFVALDGLFDNPRGFLHGQPGVLYFGNNRQPAMYYYFVQNLRLGTWRAQHL
Ga0209166_104862881	3300027857	Surface Soil	AYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDNAEYRVHLAVTNLDSRPYTSDVTLKDDEGHALHTEVELPPNGSRFLTLDGLFQNPHGFLHDQPGVLYFGNNRQPAMYYYFVQNTRLGTWRAQHL
Ga0209701_102766992	3300027862	Vadose Zone Soil	VRRHFEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVYLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPNGSRFLTLDGLFANPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Ga0209590_103888212	3300027882	Vadose Zone Soil	FEGAQLGSSRAYLHWYNDHSLTSSHEKFGLTIPAVGGYWTVPNVQDSDEYRVHLAVTNLDSRPYTSDVTLKDDEGHALHTEVDLPPSGSRFLTLDGLFQNPRGFLHDQPGVLYFGNNRQPAMYYYFVQNQRLGTWRAQHL
Ga0308197_102343151	3300031093	Soil	AYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPDVQDSHEYRVHLAVTNLDRAAYVSDITLKDSEGHALHTTVELPPNGSRFLSLAGLFHDVSGFLDRTPGVLYFGNNHQPAMYYYFIHNQRLGSWRAQHL
Ga0272437_12153061	3300031472	Rock	YVTLFDAAGAELAARRFHIARNGTLVLELADLLPARRRGRVPSGQVRVDFEGPQLGSSRAYLHWYNGRSLTSSHEKFGLTIPAVGGYWTVPNVVHSEEYHTHLAVTNLDDKPYSSAIILKDGAGRARETTLDVPPNGSRFVALEDLFEDPAAFLGSQPGILYFGNYAQPAMYYYFIANDRLGTWRAQHL
Ga0306926_114022641	3300031954	Soil	ARNASVVLELGDLLPAQQRGRMQSGQVIADFEGRQLGSSRAYLHWYNDRSLTSSHEKFGLTIPAVGGYWTVPNVQDSDDYRVHLAITNLDSHPYMSDVTLKDDEGHQLQSEVWLPPNGSRFVALDALFENPRGFLHGQPGVLYFGNNRQPAMYYYFVQNQKLGTWRAQHL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091652

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences