Metagenome Family F091773

Basic Information
Family ID	F091773
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	80 residues
Representative Sequence	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYESDDDG
Number of Associated Samples	84
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.58 %
% of genes near scaffold ends (potentially truncated)	34.58 %
% of genes from short scaffolds (< 2000 bps)	76.64 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (80.374 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.149 % of family members)
Environment Ontology (ENVO)	Unclassified (42.056 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.290 % of family members)

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.08% β-sheet: 13.21% Coil/Unstructured: 54.72%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
d.14.1.1: Translational machinery components	d3b82a4	3b82	0.53293
f.44.1.0: automated matches	d2b2ha_	2b2h	0.5297
d.14.1.1: Translational machinery components	d3jb9b5	3jb9	0.52235
f.44.1.1: Ammonium transporter	d1u7ga_	1u7g	0.50501

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01050	MannoseP_isomer	35.51
PF01590	GAF	15.89
PF09365	DUF2461	8.41
PF12706	Lactamase_B_2	7.48
PF02954	HTH_8	3.74
PF06463	Mob_synth_C	2.80
PF00072	Response_reg	0.93
PF07690	MFS_1	0.93
PF00709	Adenylsucc_synt	0.93
PF10531	SLBB	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	2.80
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.37 %
Unclassified	root	N/A	19.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.37 %
Unclassified	root	N/A	19.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.37 %
Unclassified	root	N/A	19.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.41 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
Unclassified	root	N/A	19.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	6.54 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
Unclassified	root	N/A	19.63 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.69 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6.54 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %
Unclassified	root	N/A	19.63 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.69 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.93 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1.87 %
Unclassified	root	N/A	19.63 %

Name	Rank	Taxonomy	Distribution
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.69 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	1.87 %
Unclassified	root	N/A	19.63 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.69 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Desulfobacterales bacterium CG07_land_8_20_14_0_80_52_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium CG07_land_8_20_14_0_80_52_14	0.93 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	1.87 %
Unclassified	root	N/A	19.63 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.93 %

Name	Rank	Taxonomy	Distribution
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.69 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Desulfobacterales bacterium CG07_land_8_20_14_0_80_52_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium CG07_land_8_20_14_0_80_52_14	0.93 %
Syntrophobacter fumaroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans	1.87 %
Unclassified	root	N/A	19.63 %

Name	Rank	Taxonomy	Distribution
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.69 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Desulfobacterales bacterium CG07_land_8_20_14_0_80_52_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium CG07_land_8_20_14_0_80_52_14	0.93 %
Syntrophobacter fumaroxidans MPOB	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans → Syntrophobacter fumaroxidans MPOB	1.87 %
Unclassified	root	N/A	19.63 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_10643421	All Organisms → cellular organisms → Bacteria → Acidobacteria	3480	Open in IMG/M
3300002124\|C687J26631_10310312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium CG07_land_8_20_14_0_80_52_14	520	Open in IMG/M
3300003324\|soilH2_10337592	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300004013\|Ga0055465_10164981	Not Available	710	Open in IMG/M
3300004114\|Ga0062593_102070014	Not Available	634	Open in IMG/M
3300004156\|Ga0062589_101323444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → Syntrophobacter fumaroxidans → Syntrophobacter fumaroxidans MPOB	698	Open in IMG/M
3300004463\|Ga0063356_100068307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3683	Open in IMG/M
3300004463\|Ga0063356_100085074	All Organisms → cellular organisms → Bacteria	3362	Open in IMG/M
3300004480\|Ga0062592_101392632	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300004480\|Ga0062592_101523476	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	42.99%
Host-Associated	Host-Associated	57.01%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	1.87%
Plants	Host-Associated → Plants	57.01%
Terrestrial	Environmental → Terrestrial	41.12%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.51%
Roots	Host-Associated → Plants → Roots	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%
Soil	Environmental → Terrestrial → Soil	41.12%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.93%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_106434213	3300000891	Soil	MISNKEIRALYGSKAVVSRKGAFTLVHLDNPSRDTVKKRRQEFDPSEFFCPDCPLCQLLKESGIVVFDESIFDGEDEFIE*
C687J26631_103103122	3300002124	Soil	MFSNKAIRALYGSAAVISRKGQFILVHLDRPSAATIRRRRREFEPRKFFCADCPLCQMLKESGVVVFDDSIFE
soilH2_103375922	3300003324	Sugarcane Root And Bulk Soil	MLSNREIRALYGKDAVISRKDSFILVHLDNPSPAVVRKRRDEFNPDDFFCPDCPLCQMLKESGIVVFDESIFDEESIE*
Ga0055465_101649812	3300004013	Natural And Restored Wetlands	MISNKEIRALYGSKAVISRKGAFVLVHLDSPSRVKVRSRTKEFDPEEFFCPDCPLCQMLMKGGVVVFDDSIFEEEEGI*
Ga0062593_1020700141	3300004114	Soil	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPGEFFCADCPLCQLLQESGVVVFDDSIFDDEGETS*
Ga0062589_1013234441	3300004156	Soil	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLEE*
Ga0063356_1000683075	3300004463	Arabidopsis Thaliana Rhizosphere	MLSNKEVRALYGPRAVVSRKGAFVLVHLDSPSKDTMRKRRKEFDPARFFCPDCPLCQLLKKSGIVVFDDSIFEEDQGIVD*
Ga0063356_1000850742	3300004463	Arabidopsis Thaliana Rhizosphere	MLSNKEIRALYGPKAIISRKGTFVLVHLDEPPRATVRKRTAEFDPAEFFCPDCPLCEVLKESGIIVFDETVFDEETME*
Ga0062592_1013926322	3300004480	Soil	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYESDDDGLEE*
Ga0062592_1015234761	3300004480	Soil	MLSNKEIRALYGRNAVISRKDSFILVHLDNPSPATVRRRKREFNAKEFFCPECPLCQMLKQSGI
Ga0065712_105265702	3300005290	Miscanthus Rhizosphere	SAESTCPMLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAEVRRRRAEFDPVDFFCPDCPLCQILKESGIVVFDESIFDEETIE*
Ga0065707_107873131	3300005295	Switchgrass Rhizosphere	MLSNKEIRALYGKNAVISRKDSFILVHLDNPSAATVRKRKREFNPKEFFCPECPLCQMLKESGVVVFDDSLFDDETKD*
Ga0070670_1000129146	3300005331	Switchgrass Rhizosphere	MFSIKEIRALYGKSAVISRKGAFTLVHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKKSGVVVFDDSIYEGDDGESED*
Ga0070670_1013584831	3300005331	Switchgrass Rhizosphere	MLSDKEIRSLYGKSVVISRKGAFTLIHLDKPSKATIRRRRREFDPVGFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLEE*
Ga0066388_1004055793	3300005332	Tropical Forest Soil	MLSKKEIRALYGSKAVVSRKGSFVLVHLDSPSRATVRQRRKEFDPASFFCPDCPLCQVLKKSGIVVFDDSIFEDAD*
Ga0068869_1019229302	3300005334	Miscanthus Rhizosphere	GRNAVVSRKGTFVLVHLDRPSRATISKRRREFDPLRFFCPDCPLCQLLKKSGIVVFDDSIYDDDEDSLTE*
Ga0070689_1022269121	3300005340	Switchgrass Rhizosphere	MLSNKQIRALYGASVVISRKGAFVLVHLDRPSKATVRRRRREFDPVEFFCPDCPLCQLLKQSGVVVFDDSIYAGDEE*
Ga0070668_1014642012	3300005347	Switchgrass Rhizosphere	MLSNKEIRALYGQKVIISRKGSFVLVHLDRPSRETIRKRRQEFDPAEFFCPDCPLCQVLKESGIVVFDELTFDEETMSEEPAD*
Ga0070669_1002729413	3300005353	Switchgrass Rhizosphere	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFEPGKFFCADCPLCQLLQESGVVVFDDSIFDDEGETS*
Ga0070675_1002102492	3300005354	Miscanthus Rhizosphere	MLSNKEIRALYGQKVIISRKGSFVLVHLDRPSRATIRKRRQEFDPAEFFCPDCPLCQVLKESGIVVFDELTFDEETMSEEPAD*
Ga0070675_1008832442	3300005354	Miscanthus Rhizosphere	MLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAEVRRRRAEFDPVDFFCPDCPLCQILKESGIVVFDESIFDEETIE*
Ga0070675_1021554071	3300005354	Miscanthus Rhizosphere	RSLLCPMPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPVKFFCADCPLCQLLQESGVVVFDDSIFDDEGETS*
Ga0070659_1021657301	3300005366	Corn Rhizosphere	EIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLKE*
Ga0070686_1003729723	3300005544	Switchgrass Rhizosphere	MLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAEVRRRRAEFDPVDFFCPDCPLCQILKESGIVVFDESIFDEDTIE*
Ga0070686_1015478381	3300005544	Switchgrass Rhizosphere	MLSDKEIRSLYGNSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGL
Ga0070664_1014742941	3300005564	Corn Rhizosphere	MLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAVVRRRRAEFDPVDFFCPDCPLCQILKESGIVVFDESIFDEETIE*
Ga0068864_1003735022	3300005618	Switchgrass Rhizosphere	LWLSLHGVLLSMLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYESDDDGLEE*
Ga0068866_112669911	3300005718	Miscanthus Rhizosphere	ALWLSLRGVLPSMLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLKE*
Ga0066903_1020044462	3300005764	Tropical Forest Soil	MPSKKEIRELYGRNAVISRKGAYFLVHLDQPSRSTIDRRRKEFDPKRFFCADCPLCQLLKQSGIVVFDDSIYDEDQESVIK*
Ga0068863_1018399202	3300005841	Switchgrass Rhizosphere	HSLFRFILRLPFGCPSAESTCPMLSNKEIRALYGQNAVISRKDSFILVYLDSPSPAEVRRRRAEFDPVDFFCPDCPLCQILKESGIVVFDESIFDEDTIE*
Ga0068860_1014175032	3300005843	Switchgrass Rhizosphere	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLKE*
Ga0068862_1003003802	3300005844	Switchgrass Rhizosphere	MLSNKEIRALYGQKVIISRKGSFVLVHLDRPSRATIRKRREEFDPAEFFCPDCPLCQVLKESGIVVFDELIFDEETMSEEPAE*
Ga0066653_101204092	3300006791	Soil	MFSKKDIRALYGKTAVISRKGAFVLVHLDHPSAATIRRRKREFDPLQVFCADCPLCQLLKESGVLVYDDSIFSVDEVE*
Ga0075428_1017918781	3300006844	Populus Rhizosphere	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPGEFFCADCPLCQLLQESGVVVFDDSIFDD
Ga0075420_1015547802	3300006853	Populus Rhizosphere	MLSNKEIRALYGKKVIISRKGSFVLVHLDRPSRATIRKRRQEFDPAEFFCADCPLCQVLKESGIVVFDEW
Ga0079217_102582152	3300006876	Agricultural Soil	MLSNKEIRALYGEKAVVSRKEGFTLVHLDSPSRATVRRRNREFDPNEFFCPDCPLCQMLKTSGIVVFDDAIFEDGNTD*
Ga0068865_1001375042	3300006881	Miscanthus Rhizosphere	MLSNREIRALYGRGVVISRKGAFTLVHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKKSGVVIFDDSIYESDDSGFED*
Ga0079215_101934492	3300006894	Agricultural Soil	MLSIKEIRALYGRKAVVSRKGTFTLVHLDAPSRATVRRRTAEFDPEDFFCADCPLCQLLKGSGVVVFDDSIFAEEDGDDE*
Ga0079218_100651082	3300007004	Agricultural Soil	MLSIKEIRALYGQSAVLSRKGAFTLVHLDAPSRATIRRRKEEFDPDEFFCVDCPLCQLLKKSGIVVFDDSIFDGDEE*
Ga0079218_103024852	3300007004	Agricultural Soil	MLSIKEIRALYGRKAVVSRKGTFTLVHLDAPSRATVRRRTAEFDPEDFFCADCPLCQLLKGSGVVVFDDSIFTEEDVDDE*
Ga0111539_101616073	3300009094	Populus Rhizosphere	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSVIVVFDDSIYETDDDGLEE*
Ga0111539_108775121	3300009094	Populus Rhizosphere	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPVEFFCADCPLCQLLQESGVVVFDDSIFDDEGETS*
Ga0111539_126897931	3300009094	Populus Rhizosphere	MLSNKEIRALYGASAVISRKGAFVLVHLDQPSRALIRKRRREFDPAKFFCSDCPLCQLLKKSEIVVFDDSIFDEEETWGDSDQ*
Ga0105247_117001762	3300009101	Switchgrass Rhizosphere	ACRTISEDNLHSLFRFILRLPFGCPSAESACPMLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAEVRRRRAEFDPVDYFCPDCPLCQILKETGIVVFDESIFDEETIE*
Ga0111538_1001393811	3300009156	Populus Rhizosphere	GSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPVEFFCADCPLCQLLQESGVVVFDDSIFDDEGETS*
Ga0111538_118669111	3300009156	Populus Rhizosphere	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPGKFFCADCPLCQLLQESGVVVFDDSIFDDEGETS*
Ga0111538_139502312	3300009156	Populus Rhizosphere	MLSNKEIRALYGASAVISRKGAFVLVHLDQPSRALIRKRRREFDPAKFFCSDCPLCQLLRKSGIVVFDDSIFDEEETWGDSDQ*
Ga0105242_103248143	3300009176	Miscanthus Rhizosphere	MYSNKDIRALYGKEAVISRKGSFILVHLDRPSAATIRRRRREFDPRQVFCTDCPLCQTLKESGVVVFDDSIFTDDAAE*
Ga0105249_102864703	3300009553	Switchgrass Rhizosphere	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPVKFFCADCPLCQLLQESGVVVFDDSIFDDEGETS*
Ga0126377_101427303	3300010362	Tropical Forest Soil	MLSKKEIRALYGSKAVISRKGAFVLVHLDSPSRATVRQRRKEFDPASFFCPDCPLCQLLKRSGIVVFDDAIFEDTD*
Ga0134122_116480372	3300010400	Terrestrial Soil	NKVVISRKGSFALVHLDRPTAATIRRRRREFNPHEYFCADCPLCQSLKESGVVLFDDSVFEEDD*
Ga0134121_1000035027	3300010401	Terrestrial Soil	MFSNKDIRALYGKEAVISRKGAFILVHLDRPSAATLRRRSREFNPRQFFCADCPLCQMLKESGVVVFDDSIFPDEEESE*
Ga0157281_11016401	3300012883	Soil	ALWLSLRGVLPSMLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLEE*
Ga0157282_101508192	3300012904	Soil	PVPDRSSFRYTPAALWLSLHGVLLSMLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYESDDDGLEE*
Ga0137359_111127251	3300012923	Vadose Zone Soil	MFSNKDIRALYGKEAVISRKGAFILVHLDRPSAATVRRRRREFDPRQVFCADCPLCQLLKESGIVVF
Ga0157378_101199552	3300013297	Miscanthus Rhizosphere	MLSNREIRALYGRGVVISRKGAFTLVHLDRPSKATIRRRRREFDPVEFLCPDGPLCQLLKKSAVGSFDDSIYESDDSGFED*
Ga0163163_109671602	3300014325	Switchgrass Rhizosphere	MLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAVVRRRRAEFDPVDFFCPDCPLCQILKESGIVVFDESIFDEDTIE*
Ga0157380_101271963	3300014326	Switchgrass Rhizosphere	RSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLKE*
Ga0157380_118538101	3300014326	Switchgrass Rhizosphere	MFSNKDIRALYGKGAVISRKGAFILVHLDRPSATTLRRRKREFNPRQFFCADCPLCQMLKESGVVVFDDSIFSDEEERE*
Ga0157377_107130562	3300014745	Miscanthus Rhizosphere	MLSNKEIRALYGQKVIISRKGSFVLVHLDRPSRATIRKRRQEFDPAEFFCPDCPLCQVLKESGIVVF
Ga0157377_110082971	3300014745	Miscanthus Rhizosphere	MLSNKQIRALYGASVVISRKGAFVLVHLDRPSKATVRRRRRQFDPVEFFCPDCPLCQLLKQSGVVVFDDSIYAGDEE*
Ga0173483_104146572	3300015077	Soil	VISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYESDDDGLEE*
Ga0132258_102720143	3300015371	Arabidopsis Rhizosphere	MLSNKEIRALYGRNAVISRKDSFILVHLDNPSPATVRRRKREFNAKEFFCPECPLCQMLKDSGIVVFDDSLFDEETMD*
Ga0132258_102772753	3300015371	Arabidopsis Rhizosphere	MLSNKEIRALYGRSVVISRKGAFVLVHLDRPSKATIERRRREFDPAEFFCPDCPLCQLLKKSGVVVFDDSIYEEDDSIDTD*
Ga0132258_103241872	3300015371	Arabidopsis Rhizosphere	MPSRKEIQELYGRNAIISRKGTYLLVHLDQPSRATINRRRKEFDPSRFFCPDCPLCQLLKKSGIVVFDDSIYDEDDESLIE*
Ga0132258_109023483	3300015371	Arabidopsis Rhizosphere	MLSNKEIRSLYGKNAVISRKGTFTLVHLDRPSKATIRRRRREFDPGEFFCPDCPLCQLLKKSGVVVFDDSIFEGDDGGSFE*
Ga0132256_1006481061	3300015372	Arabidopsis Rhizosphere	PPFGFPTAEFTPPMLSNKEIRALYGRNAVISRKDSFILVHLDNPSPATVRRRKREFNAKEFFCPECPLCQMLKDSGIVVFDDSLFDEETMD*
Ga0132257_1006909362	3300015373	Arabidopsis Rhizosphere	LSNREIRALYGRGVVISRKGAFTLVHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKKSGVVIFDDSIYESDDSGFED*
Ga0132255_1001371963	3300015374	Arabidopsis Rhizosphere	MPSRKEIQELYGRNAIISRKGTYLLVHLDQPSRATINRRRKEFDPSRFFCPDCPLCQLLKKSGIVGFDDSIYDEDDESLIE*
Ga0132255_1027219121	3300015374	Arabidopsis Rhizosphere	MLSNKEIRALYGRSVVISRKGAFVLVHLDRPSKATIERRRREFDPAEFFCPDCPLCQLLKKSGVVVFDDSIYEEDDSIDTD
Ga0163161_107294932	3300017792	Switchgrass Rhizosphere	RSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLKE
Ga0184626_101580542	3300018053	Groundwater Sediment	MISNKEIRALYGSKAVVSRKGSFVLVHLDNPSRATIKKRRQDFDQLEFFCSDCPLCQLLKESGIVVFDESIFDESEDLAE
Ga0190270_101105913	3300018469	Soil	MLSNKQIRALYGASVVISRKGAFVLVHLDRPSKATVRRRRREFDPVEFFCPDCPLCQLLKQSGVVVFDDSIYAGDEE
Ga0190270_126033022	3300018469	Soil	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPGSFFCADCPLCQLLQESGIVVFDDSIFDDEGETS
Ga0190274_100153295	3300018476	Soil	MFSNKDIRALYGKQAVISRKGAFVLVHLDRPSAATIRRRRREFNPSQVFCADCPLCQMLKESGVVVFDDSIFEKDSME
Ga0190274_123995991	3300018476	Soil	MFSNKDIRALYGKSAVISRKGAFILVHLDRPSAATLRRRKREFNPRQFFCADCPLCQMLKESGVVVFDDSIFSDEEERE
Ga0066669_106024343	3300018482	Grasslands Soil	MLSNKDIRVLYGKEAVISRKGVFILVHLDRPSAAIIRRRTREFNPGEVFCADCPLCQMLKESGVVVFDDSIFSEEDAEA
Ga0173481_104753651	3300019356	Soil	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPGEFFCADCPLCQLLQESGVVVFDDSIFDDEGETS
Ga0173482_101661891	3300019361	Soil	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLEE
Ga0173479_100174933	3300019362	Soil	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLKE
Ga0207650_100229003	3300025925	Switchgrass Rhizosphere	MFSIKEIRALYGKSAVISRKGAFTLVHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKKSGVVVFDDSIYEGDDGESED
Ga0207650_108314062	3300025925	Switchgrass Rhizosphere	MLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAEVRRRRAEFDPVDFFCADCPLCQILKESGIVVFDESIFDEETIE
Ga0207659_100069593	3300025926	Miscanthus Rhizosphere	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYESDDDGLEE
Ga0207659_101702032	3300025926	Miscanthus Rhizosphere	MLSNKEIRALYGQKVIISRKGSFVLVHLDRPSRATIRKRRQEFDPAEFFCPDCPLCQVLKESGIVVFDELTFDEETMSEEPAD
Ga0207659_105183021	3300025926	Miscanthus Rhizosphere	PMLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAEVRRRRAEFDPVDFFCPDCPLCQILKESGIVVFDESIFDEETIE
Ga0207701_111541642	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPGEFFCADCPLCQLLQESGVVVFDDSIFDDEEETS
Ga0207706_105736653	3300025933	Corn Rhizosphere	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVF
Ga0207686_101703953	3300025934	Miscanthus Rhizosphere	MYSNKDIRALYGKEAVISRKGSFILVHLDRPSAATIRRRRREFDPRQVFCTDCPLCQTLKESGVVVFDDSIFTDDAAE
Ga0207670_117901281	3300025936	Switchgrass Rhizosphere	MLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAEVRRRRAEFDPVDFFCPDCPLCQILKESGIVVFDESIFDEETIE
Ga0207689_103033022	3300025942	Miscanthus Rhizosphere	MLSNKEIRALYGQNAVISRKDSFILVHLDSPSPAVVRRRRAEFDPVDFFCPDCPLCQILKESGIVVFDESIFDEETIE
Ga0207679_105928422	3300025945	Corn Rhizosphere	SMLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLEE
Ga0207668_114030732	3300025972	Switchgrass Rhizosphere	MLSNKEIRALYGQKVIISRKGSFVLVHLDRPSRATIRKRRQEFDPAEFFCPDCPLCQVLKESGIVVFDELTFDEETRSEEPAD
Ga0207658_108867962	3300025986	Switchgrass Rhizosphere	MLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYESDDDG
Ga0207708_104498992	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	FRYTPAALWLCLRGVLPSMRSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYESDDDGLEE
Ga0207674_109414152	3300026116	Corn Rhizosphere	MLSNKEIRALYGRNPVISRKDSFILVHLDNPSPATVRRRKREFNAKEFFCPECPLCQMLKESGIVVFDDSLFDEETKD
Ga0207428_100120061	3300027907	Populus Rhizosphere	RYTFLAFWLSHPRSLLCPMPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPGEFFCADCPLCQLLQESGVVVFDDSIFDDEGETS
Ga0268265_105835792	3300028380	Switchgrass Rhizosphere	MLSNKEIRALYGQKVIISRKGSFVLVHLDRPSRATIRKRREEFDPAEFFCPDCPLCQVLKESGIVVFDELIFDEETMSEEPAE
Ga0268264_109180922	3300028381	Switchgrass Rhizosphere	KEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLKE
Ga0310888_105233561	3300031538	Soil	MPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPGKFFCADCPLCQLLQESGVVVFDDSIFDDEGETS
Ga0307405_119745182	3300031731	Rhizosphere	MLSNKEIRALYGKNAVISRKGPFVLVHLDRPSRATIIRRRREFNPDEFFCPDCPLCQMLKKSG
Ga0310892_105428941	3300031858	Soil	SLRGVLPSMLSDKEIRSLYGKSVVISRKGAFTLIHLDRPSKATIRRRRREFDPVEFFCPDCPLCQLLKNSGIVVFDDSIYETDDDGLEE
Ga0310885_104078921	3300031943	Soil	MPSNKEIRALYGSKAVVSRKGAFVLVHLDTPSKSTIRKRLREFDPGNFFCADCPLCQLLQESGVVVFDDSIFDDEGETS
Ga0310884_100135174	3300031944	Soil	QVPPLYFPCLLVVPPWSLLCPMPSNKEIRALYGSKAVVSRKGAFVLVHLDRPSKSTIRKRLREFDPGKFFCADCPLCQLLQESGVVVFDDSIFDDEGETS
Ga0315910_104556411	3300032144	Soil	QEIRVLYGKNVVISRKCGFVLVHLDRPSAATVRRRRREFDPRQVFCADCPLCQMLKKSGVVVYDDSIFGEAEL
Ga0315912_100292155	3300032157	Soil	MMSNQEIRVLYGKNVVISRKCGFVLVHLDRPSAATVRRRRREFDPRQVFCADCPLCQMLKKSGVVVYDDSIFGEAEL
Ga0315912_102792552	3300032157	Soil	MLTIREVRALYGKQAVISRKGPFVLVHLDNPSQALIRRRRREFDPEVHFCADCPLCQILKLGGIVVFDDSVFDDGEG
Ga0307471_1024667842	3300032180	Hardwood Forest Soil	AFWLSHRGVLCLMPSKKEIQELYGLNAVVSRKGAYLLVHLDRPSRATINRRRKEFDPVRFFCPDCPLCQLLKRSGIVVFDDSIYDEDEESLIT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091773

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences