Metagenome / Metatranscriptome Family F091815

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091815
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	124 residues
Representative Sequence	VRLDRKLLLIAPAIVLVFVAAGTAYTAFQLHVLGSVSETWKERSDFIAAVERGDKSLDQRQAIGLLRVALQVEERRTAAILASRDLLITLSLVELVSCAVLAFGIRSVPREHWPRLNLSRSRE
Number of Associated Samples	88
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.28 %
% of genes near scaffold ends (potentially truncated)	28.04 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.336 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere (12.149 % of family members)
Environment Ontology (ENVO)	Unclassified (35.514 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.598 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.89% β-sheet: 0.00% Coil/Unstructured: 33.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02368	Big_2	9.35
PF12850	Metallophos_2	8.41
PF14343	PrcB_C	8.41
PF07973	tRNA_SAD	6.54
PF13176	TPR_7	1.87
PF00069	Pkinase	1.87
PF13493	DUF4118	1.87
PF03358	FMN_red	1.87
PF00355	Rieske	1.87
PF08924	DUF1906	0.93
PF00486	Trans_reg_C	0.93
PF00149	Metallophos	0.93
PF15902	Sortilin-Vps10	0.93
PF00266	Aminotran_5	0.93
PF00360	PHY	0.93
PF01075	Glyco_transf_9	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.48
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	14.02 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	13.08 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.80 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	9.35 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	2.80 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	9.35 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.80 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1.87 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	8.41 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.80 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1.87 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.93 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.74 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.80 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1.87 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.93 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	0.93 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.74 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.80 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1.87 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.93 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.93 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.74 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.80 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1.87 %
unclassified Anaeromyxobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter	0.93 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.93 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.74 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.80 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1.87 %
Anaeromyxobacter sp. SG22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. SG22	0.93 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.93 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps_contig21035.13717	All Organisms → cellular organisms → Bacteria	3020	Open in IMG/M
3300000956\|JGI10216J12902_116026911	Not Available	551	Open in IMG/M
3300001534\|A15PFW1_10092423	Not Available	581	Open in IMG/M
3300003319\|soilL2_10193765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2773	Open in IMG/M
3300003324\|soilH2_10085784	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300004114\|Ga0062593_100469069	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300004479\|Ga0062595_100597122	Not Available	859	Open in IMG/M
3300004799\|Ga0058863_11194388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	897	Open in IMG/M
3300005093\|Ga0062594_102841120	Not Available	539	Open in IMG/M
3300005327\|Ga0070658_10563322	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300005329\|Ga0070683_100043938	All Organisms → cellular organisms → Bacteria	4119	Open in IMG/M
3300005329\|Ga0070683_100130568	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M
3300005329\|Ga0070683_100288077	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1562	Open in IMG/M
3300005331\|Ga0070670_100178549	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300005339\|Ga0070660_101203466	Not Available	642	Open in IMG/M
3300005340\|Ga0070689_101781672	Not Available	561	Open in IMG/M
3300005344\|Ga0070661_100357399	Not Available	1147	Open in IMG/M
3300005347\|Ga0070668_101682671	Not Available	582	Open in IMG/M
3300005434\|Ga0070709_10004978	All Organisms → cellular organisms → Bacteria	7179	Open in IMG/M
3300005436\|Ga0070713_100007121	All Organisms → cellular organisms → Bacteria	7819	Open in IMG/M
3300005439\|Ga0070711_100374159	Not Available	1150	Open in IMG/M
3300005445\|Ga0070708_100000075	All Organisms → cellular organisms → Bacteria	63574	Open in IMG/M
3300005458\|Ga0070681_11533073	Not Available	591	Open in IMG/M
3300005529\|Ga0070741_10389007	Not Available	1284	Open in IMG/M
3300005530\|Ga0070679_100361497	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300005535\|Ga0070684_100080263	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2886	Open in IMG/M
3300005535\|Ga0070684_100584020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1038	Open in IMG/M
3300005564\|Ga0070664_101291651	Not Available	689	Open in IMG/M
3300005618\|Ga0068864_100388549	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300005901\|Ga0075274_1049546	Not Available	641	Open in IMG/M
3300005904\|Ga0075280_10081274	Not Available	651	Open in IMG/M
3300005949\|Ga0066791_10122835	Not Available	530	Open in IMG/M
3300006755\|Ga0079222_11067504	Not Available	704	Open in IMG/M
3300006854\|Ga0075425_100172252	All Organisms → cellular organisms → Bacteria	2485	Open in IMG/M
3300007004\|Ga0079218_11656935	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300009012\|Ga0066710_101404925	Not Available	1081	Open in IMG/M
3300009093\|Ga0105240_10162346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2653	Open in IMG/M
3300009176\|Ga0105242_11693188	Not Available	668	Open in IMG/M
3300009545\|Ga0105237_10112933	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2709	Open in IMG/M
3300010038\|Ga0126315_10625102	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300010358\|Ga0126370_12153463	Not Available	548	Open in IMG/M
3300010373\|Ga0134128_10031369	All Organisms → cellular organisms → Bacteria	6244	Open in IMG/M
3300010373\|Ga0134128_10418122	Not Available	1496	Open in IMG/M
3300010373\|Ga0134128_12568105	Not Available	561	Open in IMG/M
3300010375\|Ga0105239_10847885	Not Available	1048	Open in IMG/M
3300010399\|Ga0134127_10000003	All Organisms → cellular organisms → Bacteria	545033	Open in IMG/M
3300010399\|Ga0134127_10870130	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300010399\|Ga0134127_11560332	Not Available	734	Open in IMG/M
3300010401\|Ga0134121_12494506	Not Available	559	Open in IMG/M
3300010403\|Ga0134123_12478021	Not Available	584	Open in IMG/M
3300011416\|Ga0137422_1036425	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300011441\|Ga0137452_1132309	All Organisms → cellular organisms → Bacteria → FCB group	834	Open in IMG/M
3300012210\|Ga0137378_11802563	Not Available	516	Open in IMG/M
3300012350\|Ga0137372_10424220	Not Available	1003	Open in IMG/M
3300012469\|Ga0150984_114163496	Not Available	559	Open in IMG/M
3300012931\|Ga0153915_10005293	All Organisms → cellular organisms → Bacteria	11988	Open in IMG/M
3300012931\|Ga0153915_10026294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5788	Open in IMG/M
3300012944\|Ga0137410_11697560	Not Available	555	Open in IMG/M
3300012987\|Ga0164307_10895908	Not Available	713	Open in IMG/M
3300013104\|Ga0157370_10000311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	60937	Open in IMG/M
3300013105\|Ga0157369_11088602	Not Available	817	Open in IMG/M
3300013307\|Ga0157372_11082725	Not Available	927	Open in IMG/M
3300014969\|Ga0157376_11668144	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300015262\|Ga0182007_10075346	Not Available	1106	Open in IMG/M
3300017959\|Ga0187779_10436803	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300018064\|Ga0187773_10263290	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300018476\|Ga0190274_10308927	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. SG22	1477	Open in IMG/M
3300018482\|Ga0066669_10271139	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1356	Open in IMG/M
3300019880\|Ga0193712_1014970	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300020070\|Ga0206356_11817572	Not Available	1341	Open in IMG/M
3300021362\|Ga0213882_10220710	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	784	Open in IMG/M
3300021445\|Ga0182009_10082845	Not Available	1431	Open in IMG/M
3300022467\|Ga0224712_10115306	Not Available	1157	Open in IMG/M
3300025315\|Ga0207697_10187106	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300025910\|Ga0207684_10444933	Not Available	1113	Open in IMG/M
3300025912\|Ga0207707_10211179	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1690	Open in IMG/M
3300025912\|Ga0207707_11260732	Not Available	596	Open in IMG/M
3300025919\|Ga0207657_10998335	Not Available	642	Open in IMG/M
3300025920\|Ga0207649_10482485	Not Available	940	Open in IMG/M
3300025921\|Ga0207652_11710806	Not Available	534	Open in IMG/M
3300025923\|Ga0207681_10161200	All Organisms → cellular organisms → Bacteria → Proteobacteria	1691	Open in IMG/M
3300025944\|Ga0207661_10030639	All Organisms → cellular organisms → Bacteria	4146	Open in IMG/M
3300025944\|Ga0207661_10500371	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300025944\|Ga0207661_11320529	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	663	Open in IMG/M
3300025945\|Ga0207679_11241918	Not Available	684	Open in IMG/M
3300025949\|Ga0207667_10205137	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300025949\|Ga0207667_10400573	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1397	Open in IMG/M
3300031716\|Ga0310813_11001445	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	762	Open in IMG/M
3300031748\|Ga0318492_10425191	Not Available	700	Open in IMG/M
3300031938\|Ga0308175_100030874	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4427	Open in IMG/M
3300031938\|Ga0308175_100097202	All Organisms → cellular organisms → Bacteria	2702	Open in IMG/M
3300031938\|Ga0308175_100328527	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300031938\|Ga0308175_100389484	Not Available	1452	Open in IMG/M
3300031938\|Ga0308175_101056782	Not Available	899	Open in IMG/M
3300031939\|Ga0308174_10057581	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300031939\|Ga0308174_10536058	Not Available	962	Open in IMG/M
3300031996\|Ga0308176_10237925	Not Available	1738	Open in IMG/M
3300031996\|Ga0308176_10720194	Not Available	1036	Open in IMG/M
3300033412\|Ga0310810_10055702	All Organisms → cellular organisms → Bacteria	4806	Open in IMG/M
3300033433\|Ga0326726_10006576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	10463	Open in IMG/M
3300033475\|Ga0310811_10033543	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6840	Open in IMG/M
3300033475\|Ga0310811_10169789	All Organisms → cellular organisms → Bacteria	2715	Open in IMG/M
3300033480\|Ga0316620_11568731	Not Available	651	Open in IMG/M
3300033486\|Ga0316624_10031756	All Organisms → cellular organisms → Bacteria	3158	Open in IMG/M
3300034090\|Ga0326723_0014400	All Organisms → cellular organisms → Bacteria	3165	Open in IMG/M
3300034268\|Ga0372943_1009964	Not Available	555	Open in IMG/M
3300034965\|Ga0370497_0202937	Not Available	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.70%
Host-Associated	Host-Associated	24.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.96%
Plants	Host-Associated → Plants	23.36%
Aquatic	Environmental → Aquatic	3.74%
Human	Host-Associated → Human	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.74%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Sediment	Environmental → Aquatic → Sediment	1.87%
Peat	Environmental → Terrestrial → Peat	1.87%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%
Digestive System	Host-Associated → Human → Digestive System	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.93%
Loam	Environmental → Terrestrial → Soil → Loam	17.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.93%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.41%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.87%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.93%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005901	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201	Environmental	Open in IMG/M
3300005904	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404	Environmental	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_02501970	2199352024	Soil	VRLDRKLLLIAPAIVLVFVAAGIAYTAFQLHVLGAGSDTWKGRSDFIAAVERGEKPLDQHQAVGLLRVALEVEEKRSLAIAASRDLLVTLSLVELAACVVLAFGIRSVPREHWPRLNLSRNREA
JGI10216J12902_1160269111	3300000956	Soil	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGVTFKERSDFVAAVDRGEKTLDARQATGLLKWAMEVEAKRTSAVESIRDLMIALSAIALVCCGVLALGIRSVPREHWPRLNIGRQVTE*
A15PFW1_100924232	3300001534	Permafrost	VRLDKKLLLIAPTIVLFFVAAGIFYAAMQLQVLTAVSDSMKDRRTFIGAAERGEKPLTEQQATGMLGIALDVEARRTAAIEANRELLIELGAIAVVACCVLAAGISKVPREHWPRFRTGRENPG*
soilL2_101937652	3300003319	Sugarcane Root And Bulk Soil	VLVFVAAGLIYAATQLHLLATVSDTFQERSDFIASVERGEKSLNARQAVGLVRLGLEVESKRTAAVIASRDLIGALSAIALVSCGVLALGIRSVPREHWPRMSFGRSRAG*
soilH2_100857842	3300003324	Sugarcane Root And Bulk Soil	VRLDRKLLLIAPTIVLFCVTAGIAYTAAELHVLGSVGATWKDRSEFIASVERGEKQLDQRQALGILRISLDVESRRTAAIEASQDLLIALAVIAFVACGALALGIRSVPREHWPTFRGWRKIESPRTTPVEGSGS*
Ga0062593_1004690692	3300004114	Soil	VRLDRKLLLIAPVIVLFFVAAGMVYAAFQMHVLSSVSDTWQERSDFIASVERGEKTLSQQQAVGLLRYALEVESKRTGALTASRDLVALLGAIALVACGVLAFGIR
Ga0062595_1005971221	3300004479	Soil	IAPAIVLVFVAAGIAYTALQLHVLGSGSDTWKGRSDFVAAVERGEKTLDQRQAIGLLRVALQVEERRTTALVASRDLLITLSLVALASCAMLAFGIRSVPREHWPRLNLSRSRES*
Ga0058863_111943882	3300004799	Host-Associated	VRLDRKLLLIAPTIVLFCVAAGLVYAAMQLHVLESLGDSWNDRSSFIASVESGEKKIETRQAVTMLRYSLDVEAKRTTAITASRDLLVVLSIIAGVSCVVLGIGVRGVPREHWPRFGRAPAE*
Ga0062594_1028411202	3300005093	Soil	TIVLVFVIAGLIYTAMQLHVLSSVGENFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIRSVPREHWPRLNMGRKVTE*
Ga0070658_105633222	3300005327	Corn Rhizosphere	VRLDRKLLLIAPTVVLFLVVAGMVYTAVQLHVLAGVSETLAERSDFIASVERGEKTLSQRQSIGLLRLTTEVEARRTAAITASRDLMIVLSAMGFASCCVLGLGIRKVPREHWPRFGGAPPAGP*
Ga0070683_1000439383	3300005329	Corn Rhizosphere	MRPKAKGAARKRRSRPEQAPSRALCLIVCVRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELASCAVLVFGIRTVPREHWPRLNLTRSAE*
Ga0070683_1001305684	3300005329	Corn Rhizosphere	VRLDRKLLLIAPAIVLVFVAAGIAYTAFQLRVLGAGSDTWKGRSDFIASVERGEKPLDQRQAVGLLRVALEVEEKRSLAIAASRDLLITLSLVELAACVVLAFGIRAVPREHWPRLNLSRNREA*
Ga0070683_1002880771	3300005329	Corn Rhizosphere	VRLDRKLLLIAPTIVLAFVVAGMIYAAMQLHILGSVSDTLKERSEFVGAVERGQKPLTERQAVGLLRIQLEVEEKRTAAIAASRDLLIALAAMALASCAVLAVGIRSVPREHWPRLSFRRSVVE*
Ga0070670_1001785492	3300005331	Switchgrass Rhizosphere	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGENFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIRSVPREHWPRLNMGRKVTE*
Ga0070660_1012034662	3300005339	Corn Rhizosphere	VRFDRKLLLIAPTIVLAFVVAGMIYAAMQLHILGSVSDTLKERSEFVGAVERGQKPLTERQAVGLLRIQLEVEEKRTAAIAASRDLLIALAAMALASCAVLAVGIRSVPREHWPRLSLRRSVVE*
Ga0070689_1017816721	3300005340	Switchgrass Rhizosphere	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGENFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIRSVPREH
Ga0070661_1003573994	3300005344	Corn Rhizosphere	MRPKAKGAARKRRSRPEQAPSRALCLIVCVRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELACCAVLVFGIR
Ga0070668_1016826711	3300005347	Switchgrass Rhizosphere	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGETFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIRSVPREHWPRLNMGRKVTE*
Ga0070709_100049784	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VRLDRKLLLIAPAIVLVFVAAGIAYTALQLHVLGSGSDTWKGRSDFVAAVERGEKTLDQRQAIGLLRVALQVEERRTTALVASRDLLITLSLVALASCAMLAFGIRSVPREHWPRLNLSRSRES*
Ga0070713_1000071215	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRLDRKLLLIAPAIVLVFVAAGMAYTALQLRVLGSVSDTWKERSDFIASVERGDKTLDQRQAVSLLQFALQVEEKRTAAIAASRDLLITLSIVELVACVVLVFGIRTVPREHWPRLNLGRSGD*
Ga0070711_1003741593	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VRLDRKLLLIAPAIVLVFVAAGMAYTALQLRVLGSVSDTWKERSDFIASVERGDKTLDQRQAVSLLQFALQVEEKRTAAIAASRDLLITLSIVELVACVVLVFGIRTVPREHWPRL
Ga0070708_1000000754	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPAPAAARTSLCFIVWVRLDRKLLLIAPAIVLVFVAAGIAYTARQLQVLRSGSDTWKDRSDFVAAVERGEKSLDQRQAVGLLRVALQVEERRSAALAASRDLLVTLSLVELASCVVLVFGIRTVPREHWPRLNLSRSPE*
Ga0070681_115330732	3300005458	Corn Rhizosphere	LLIAPTIVLAFVVAGMIYAAMQLHILGSVSDTLKERSEFVGAVERGQKPLTERQAVGLLRIQLEVEEKRTAAIAASRDLLIALAAMALASCAVLAVGIRSVPREHWPRLSLRRSVVE*
Ga0070741_103890073	3300005529	Surface Soil	VRLDRKLLLIAPTIVLFFVAAGLVYAAVQLHVLGSVSETWKERSDFITAVERGQKPLEPRQAVGLLRLSLDVESRRTAAIAASRDLMVELSVIAFASCCALAVGIRGVPREHWPRFTFSRDAG*
Ga0070679_1003614972	3300005530	Corn Rhizosphere	VRLDRKLLLIAPTIVLFCVAAGLIYAATQLHLLESLGDSWKDRSAFIASVESGQKQIETRQAVTMLRFSLDVEAKRTAAITASRDLLIVLSAIAVISCAALGIGIRGVPREHWPRFGRARTE*
Ga0070684_1000802634	3300005535	Corn Rhizosphere	VRLDRKLLLIAPTIVLVLVAAGIVYAAAQLHVLTSVSDSWKARSDFIASVERGEKRLDQRQAVELLDYALQVESRRTAAISASHDLLVTLAAMALVSCGVLGYGIRSVPREHWPRLRSTERGSEPPP*
Ga0070684_1005840202	3300005535	Corn Rhizosphere	VRLDRKLLLIAPAVVLAFVVAGMISAAVQLHVLGDVSQTLKERQDFISAVERGQKTLDERQALGIIHLQFDVETKRTAAIVAARDLLIVLSAIGGAALVVLTIGIRSVPREHW
Ga0070664_1012916513	3300005564	Corn Rhizosphere	MRPKAKGAARKRRSRPEQAPSRALCLIVCVRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELACCAVLVFGI
Ga0068864_1003885492	3300005618	Switchgrass Rhizosphere	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGETFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLLIALSTIALVCCGVLALGIRSVPREHWPRLNMGRKVTE*
Ga0075274_10495462	3300005901	Rice Paddy Soil	VRLDRKLLLIAPAIVLVLIVAGMAYSAFQLNVLGSVSNTWKERSDFIGAVERGEKTLDERQAVGLLRVALQVEQRRTAAITASRDLMITLSSIAFVSCVVLGLGIRSVPREHWPRLNMGRSKGE*
Ga0075280_100812741	3300005904	Rice Paddy Soil	VRLDRKLLLIAPTIVLFFVAAGLIYAAVQLHVLGSVSETWKERSDFITAVEQGRKALETRQAVGLLRLSLDVEARRTAAITASRDLLIALSVIAVACCGVLTVGIRSVPREHWPRITFGRNAR*
Ga0066791_101228351	3300005949	Soil	VRLDRKLLLIAPTIVLLFVVAGMFYAATQLRVLGAVSDSWKDRSDFIAAAARGDKPLSQQQSTGLLRLALDVEAKRTAAIAASRDLLIELAVIALAACCVLGIGIRSVPREHWPRFTTAPSRAE*
Ga0079222_110675041	3300006755	Agricultural Soil	LSSQAAADVRLCLIVWVRLDRKLLLIAPAIVLVFVAAGIAYTALQLHVLGSGSDTWKGRSDFVAAVERGEKTLDQRQAIGLLRVALQVEERRTTALVASRDLLITLSLVALASCAMLAFGIRSVPREHWPRLNLSRSRES*
Ga0075425_1001722523	3300006854	Populus Rhizosphere	LSSQAAADVRLCLIVWVRLDRKLLLIAPAIVLVFVAAGIAYTALQLNVLGSGSDTWKGRSDFVAAVERGEKTLDQRQAIGLLRVALQVEERRTTALVASRDLLITLSLVALASCAMLAFGIRSVPREHWPRLNLSRSRES*
Ga0079218_116569351	3300007004	Agricultural Soil	VRFDRKLLLIAPTIVLVFVAAGLIYTAVQLHVLSSVSDTFQERSVFVAAVERGEKTLDARQATGLLKWAMEVEAKRTAAVESIRDLMIALSTIALVCCGV
Ga0066710_1014049252	3300009012	Grasslands Soil	MQFDRKLILIAPTIVLAFVVAGLLYAAAQLRVLGSVSETWKDRSDFITAVEHGRRTLDQRQAVGILRLSLDVEAKRTAAINAAYDLLLALAVIAGLCCVALADGIRRVPREHWPRFGVH
Ga0105240_101623464	3300009093	Corn Rhizosphere	VRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELACCAVLVFGIRTVPREHWPRLNLTRSAE*
Ga0105242_116931881	3300009176	Miscanthus Rhizosphere	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGETFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIRSVPREHWPRLNMDRKVTEGAQFDSRSGC*
Ga0105237_101129333	3300009545	Corn Rhizosphere	VRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELACCAVLMFGIRTVPREHWPRLNLTRSAE*
Ga0126315_106251022	3300010038	Serpentine Soil	VRLDRKLLLIAPAIVLVLVAAGMVYAATQLHVLASVSDTWQERSDFLGSVERGEKPLDATKAVGLLRISLEVESRRTEAIMAGRDLMIVLATVALVACSVLVIGIRSVP
Ga0126370_121534632	3300010358	Tropical Forest Soil	VRFDRKLLLIAPTIVLFCVAAGLIYAAVQLHVLGSVSETWNERSAFIASVEAGQKPLQTQQAVGLLRFALEVEARRTSAIAASRDLLIALAIMAFVSCCVLGVGIRGVPREHWPRLSFKRERAG*
Ga0134128_100313693	3300010373	Terrestrial Soil	VRLDRKLLLIAPTIVLLFVAAGTVYAAVQLSVLGSVSDTWKQRSDFIGSVERGDKPLDRQQAVRLLRFALDVEARRTGGIQAARDLLILLAAVSVVACATLAVGIRAVPRHYWPRFTKGPAHDQ*
Ga0134128_104181224	3300010373	Terrestrial Soil	VRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEDKRTAAIVASRDLLITLSLIELACCAVLVFGIRTVPREHWPRLNLTRSAE*
Ga0134128_125681051	3300010373	Terrestrial Soil	VRLDRKLLLIAPTIVLVLVAAGMVYAAAQLHVLSSVSDSLKQRSDFISAVERGEKRLDQRQAVELLDYALQVESRRTAAISATHDLIVTLAAIALVSCAVLGYGIRSVPREHWPRLRTTEGAAEPGR*
Ga0105239_108478853	3300010375	Corn Rhizosphere	VRLDRKLLLIAPAIVLVFVAAGIAYTAFQLHVLGAGSDTWKGRSDFIASVERGEKPLDQRQAVGLLRVALEVEEKRSLAIAASRDLLITLSLVELAACVVLAFGIRAVPREHWPRLNLSRNREA*
Ga0134127_10000003349	3300010399	Terrestrial Soil	VRLDRKLLLIAPTIVLACVTAGIIYAAVQLHVLSSVGDTWKDRNDFITAVERGEKPLTERQAIGVLRLSLDVEARRTAAITASRDLLGWLAGIAAVACVTLAFGVRSVPREHWPRIALGRRADA*
Ga0134127_108701302	3300010399	Terrestrial Soil	VRLDRKLLLIAPTIVLLFVVAGLLYAASQLHALSRVSDSFTDRNAFISAVERGEKKLEPRQATSLLRWSLDVEAQRTAAITASRDLVIVLSVIGAVACAALAFGIRSVPREHWPRFGVSRSVPE*
Ga0134127_115603322	3300010399	Terrestrial Soil	VRLDRKLLLIAPTIVLVLVAAGMVYAAAQLHVLSSVSDSLKQRSDFISAVERGEKRLDQRQAVELLDYALQVESRRTAAISATHDLIVTLAAIALVSCAVLGYGIRSVPREHWPRLRTTEGAAEPGRPRRGHGARGRATEKGPTLHA*
Ga0134121_124945061	3300010401	Terrestrial Soil	TIVLVFVIAGLIYTAMQLHVLSSVGETFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIRSVPREHWPRLNMGRKVAE*
Ga0134123_124780211	3300010403	Terrestrial Soil	VRLDRKLFLIAPTIVLVFVVVGLVYAAIQLHVLGSVSATLGERTDFIAAVERGEKTLDARQAVGLLRLSMDVEAKRTAALTASRDLLLELAAIALVSCGVLGFGIRFVPREHWPRLSFGRSRSG*
Ga0137422_10364252	3300011416	Soil	VRFDRKLLLIAPTIVLMFVVAGVVYAAVQLHVLGSVSESYQERSDFIASVERGERSLDARQSIGLLRLAMDVESKRTAAVHASRDLLGWLSAIALVCCGVLALGIRSVPREHWPRLNFGRSRSG*
Ga0137452_11323092	3300011441	Soil	VRLDRKLLLIAPTIVLLFVVMGLIYAATQLHVLGSVGDSWKDRSDYIAAVERGEKTLQPRQAAGLLRLGLDVEAKRTAAITASRDLLIELSAMAVICCVVLMFGIRSVPREHWPRMSFGRSSPE*
Ga0137378_118025632	3300012210	Vadose Zone Soil	VRLDRKLLLIAPAIVLAFVAAGIAYTALQLHVLGSGGDTWKGRSDFVAAVERGEKSLDQRQAVGLLRVALQVEERRTAALVASRDLLITLSLVALVSCVVLAFGIRSVPREHWPRLNLSRSRE*
Ga0137372_104242201	3300012350	Vadose Zone Soil	AAGIAYTALQLHVLGSGGDTWKGRSDFVAAVERGEKSLDQRQAVGLLRVALQVEERRTAALVASRDLLITLSLVALVSCVVLAFGIRSVPREHWPRLNLSRSRE*
Ga0150984_1141634962	3300012469	Avena Fatua Rhizosphere	RKLLLIAPTIVLVFIIAGLIYTAVQMNTLASVSETFKERSDFVGAVDRGEKTLDAHQAVGLLKWAMDVESKRTAAVESIRDVMIGLSALALVCCGVLALGIRSVPREHWPRLNIGRKGTE
Ga0153915_1000529311	3300012931	Freshwater Wetlands	VRLDRKLLLIAPAIVLVFVAAGTAYTAFQLHVLGSVSETWKERSDFIAAVERGDKSLDQRQAIGLLRVALQVEERRTAAILASRDLLITLSLVELVSCAVLAFGIRSVPREHWPRLNLSRSRE*
Ga0153915_100262946	3300012931	Freshwater Wetlands	VRLDRKLLLIAPTIVLFFVAAGLIYAAVQLHVLGSVSATWKERSDFIAAVERGQKTLETRQAIGLLRLSLDVEARRTAAITASRDLLVALSIIALACCGVLTVGIRSVPREHWPRITFGRGGG*
Ga0137410_116975601	3300012944	Vadose Zone Soil	VRLDRKLLLIAPTIVLLFVVMGLIYAATQLHVLGSVGDSWKDRSDYIAAVERGEKPLQPRQALGLLRLSLDVEAKRTAAITASRDLLVELSAIAGLCCGVLVFGIRSVPREHWPRMRLGRSSPE*
Ga0164307_108959082	3300012987	Soil	VRFDRKLLLIAPTIILFFVAAGVIYAAAQLHVLGSVSETWKERSAFIAAVEAGQKPLETRQAVGLLRLSLDAGARRTAAITASRDLLIALSIMAVVCCCVLAIGIRGVPRQHWPRLNFGRERAG*
Ga0157370_1000031120	3300013104	Corn Rhizosphere	VRLDRKLLLIAPAIVLVLVAAGMAYTAAQLQVLGSVSDTWKERSDFIAAVERGDKPLDRRQAVGLLRVALQVEERRTTAIVASRDLLVTLSLVELVSCAVLVFGIRGVPREHWPRFNLSRSVD*
Ga0157369_110886022	3300013105	Corn Rhizosphere	VRLDRKLLLIAPTIVLVLVAAGMVYAAAQLHVLSSVSDSLKQRSDFISAVERGEKRLDQRQAVELLDYALQVESRRTAAISATQDLIVTLAAIALVSCGVLGYGIRSVPREHWPRLRTSEGAAEPGP*
Ga0157372_110827253	3300013307	Corn Rhizosphere	VRLDRKLLLIAPAIVLVFVAAGIAYTAFQLHVLGAGSDTWKGRSDFIASVERGEKPLDQRQAVGLLRVALEVEEKRSLAIAASRDLLITLSLVELAACVVLAFGIRAVP
Ga0157376_116681442	3300014969	Miscanthus Rhizosphere	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGETFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIR
Ga0182007_100753462	3300015262	Rhizosphere	VRLDRKLLLIAPVIVLFFVAAGMVYAAFQMHVLSSVSDTWQERSDFIASVERGEKTLSQQEAVGLLRYALEVESKRTGALTASRDLVALLGAIALVACGVLAFGIRAVPREHWPRLEFGRRPPEP*
Ga0187779_104368031	3300017959	Tropical Peatland	VRFDRKLLLIAPTIVLFFVAAGLVYAAVQLHVLGSVSETWNERSAFIAAVEAGQKTLDTRQAVGLLRLSLEVEARRTAAIGESRDLLIALSIMAAACCGVLALGIRGVPRQHWPRL
Ga0187773_102632902	3300018064	Tropical Peatland	VRFDRKLLLIAPTIVLFCVAAGLIYAAVQLHVLGSVSETWNERSAFIASVEAGQKPLETRQAVGLLRFALEVEARRTAAIAASRDLLIALAIMAFVSCCVLGVGIRGVPREHWPRLSFRRERAG
Ga0190274_103089271	3300018476	Soil	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLRVLSSVGDSFKERSDFITAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESIRDLMIALSTIALVCCGVLALGIRSVPREHWPRLNLGRKVIE
Ga0066669_102711392	3300018482	Grasslands Soil	VRLDRKLLLIAPAIVLVFVAAGIAYTALQLHVLGSGNDTWKGRSDFVAAVERGEKKLDQRQAIGLLRVALQVEERRTTALVASRDLLITLSLVALASCVTLAFGIRTVPREHWPRLNLSRSRKQ
Ga0193712_10149701	3300019880	Soil	ITHVRLDRKLLLIAPTIVLAFVVAGMVYATVQLRVLGSVGNSWKDRSDFIAAVERGEKKLDLQRTTTILRLSLTVEARRTDAIEATRDLMIVLSVMAFIACGVLAFGIRSVPREHWPQFRSRPTGNAANDVSESV
Ga0206356_118175722	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MRPKAKGAARKRRSRPEQAPSRALCLIVCVRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELASCAVLVFGIRTVPREHWPRLNLTRSAE
Ga0213882_102207102	3300021362	Exposed Rock	VRLDRKLLLIAPTIVLACVVAGMLYAAAQLHVLASVSDTWKDRNDFITAVERGQKPLNERQALSLLRFALDVEEKRTTAIMATHALLTWLSAVAAIACVVLAIGIRSVPREHWPRFAFGKEADA
Ga0182009_100828453	3300021445	Soil	LSSQAAADARLCLIVWVRLDRKLLLIAPAIVLVFVAAGIAYTALQLHVLGSGSDTWKGRSDFVAAVERGEKTLDQRQAIGLLRVALQVEERRTTALVASRDLLITLSLVALASCAMLAFGIRSVPREHWPRLNLSRSRES
Ga0224712_101153062	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MRPKAKGAARKRRSRPEQAPSRALCLIVCVRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELACCAVLVFGIRTVPREHWPRLNLTRSAE
Ga0207697_101871062	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGETFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIRSVPREHWPRLNMGRKVTE
Ga0207684_104449332	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPAPAAARTSLCFIVWVRLDRKLLLIAPAIVLVFVAAGIAYTARQLQVLRSGSDTWKDRSDFVAAVERGEKSLDQRQAVGLLRVALQVEERRSAALAASRDLLVTLSLVELASCVVLVFGIRTVPREHWPRLNLSRSPE
Ga0207707_102111792	3300025912	Corn Rhizosphere	VRLDRKLLLIAPTIVLFCVAAGLVYAAMQLHVLESLGDSWNDRSSFIASVESGEKKIETRQAVTMLRYSLDVEAKRTTAITASRDLLVVLSIIAGVSCVVLGIGVRGVPREHWPRFGRAPAE
Ga0207707_112607322	3300025912	Corn Rhizosphere	KLLLIAPTIVLAFVVAGMIYAAMQLHILGSVSDTLKERSEFVGAVERGQKPLTERQAVGLLRIQLEVEEKRTAAIAASRDLLIALAAMALASCAVLAVGIRSVPREHWPRLSLRRSVVE
Ga0207657_109983352	3300025919	Corn Rhizosphere	VRFDRKLLLIAPTIVLAFVVAGMIYAAMQLHILGSVSDTLKERSEFVGAVERGQKPLTERQAVGLLRIQLEVEEKRTAAIAASRDLLIALAAMALASCAVLAVGIRSVPREHWPRLSLRRSVVE
Ga0207649_104824851	3300025920	Corn Rhizosphere	MRPKAKGAARKRRSRPEQAPSRALCLIVCVRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELASCAVLVFGIRTVPREH
Ga0207652_117108061	3300025921	Corn Rhizosphere	VRLDRKLLLIAPTVVLTLVAAGLVYAANQLHVLSSVSDTWKERSDYIASVERGEKHLDQRQAMELLDYSLQVEAKRTAAIVASHDLILTLGIVALVSCGVLAYGIRSVPRERWPRLGSSDRAVE
Ga0207681_101612002	3300025923	Switchgrass Rhizosphere	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGENFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIRSVPREHWPRLNMGRKVTE
Ga0207661_100306394	3300025944	Corn Rhizosphere	VRLDRKLLLIAPAIVLVFVAAGIAYTAFQLRVLGAGSDTWKGRSDFIASVERGEKPLDQRQAVGLLRVALEVEEKRSLAIAASRDLLITLSLVELAACVVLAFGIRAVPREHWPRLNLSRNREA
Ga0207661_105003712	3300025944	Corn Rhizosphere	VRLDRKLLLIAPTIVLAFVVAGMIYAAMQLHILGSVSDTLKERSEFVGAVERGQKPLTERQAVGLLRIQLEVEEKRTAAIAASRDLLIALAAMALASCAVLAVGIRSVPREHWPRLSLRRSVVE
Ga0207661_113205291	3300025944	Corn Rhizosphere	VRFDRKLLLIAPTIVLVFVIAGLIYTAMQLHVLSSVGETFKERSDFIAAVERGEKTLDARQATGLLKWAMEVEAKRTSAVESVRDLMIALSTIALVCCGVLALGIRSVPREHWPRLNMGRLRSISHGKRGRSSKRRYQP
Ga0207679_112419183	3300025945	Corn Rhizosphere	MRPKAKGAARKRRSRPEQAPSRALCLIVCVRLDRKLLLIAPAIVLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELASCAVLVFGIRTVPRE
Ga0207667_102051372	3300025949	Corn Rhizosphere	VRLDRKLLLIAPTIVLVLVAAGIVYAAAQLHVLTSVSDSWKARSDFIASVERGEKRLDQRQAVELLDYALQVESRRTAAISASHDLLVTLAAMALVSCGVLGYGIRSVPREHWPRLRSTERGSEPPP
Ga0207667_104005733	3300025949	Corn Rhizosphere	VLVFVAAGIAYAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLVVALQVEEKRTAAIVASRDLLITLSLIELASCAVLVFGIRTVPREHWPRLNLTRSAE
Ga0310813_110014451	3300031716	Soil	LVFVAAGIAYTALQLHVLGSGSDTWKGRSDFVAAVERGEKTLDQRQAIGLLRVALQVEERRTTALVASRDLLITLSLVALASCAMLAFGIRSVPREHWPRLNLSRSRES
Ga0318492_104251911	3300031748	Soil	VRFDRKLLLIAPTIILFFVAAGVIYSAVQLHVLGSVSETWKERSAFIAAVEAGQKTLETRQAVGLLRLSLDVEARRTAAIVASRDLLIALSIMVVACCCVLALGIRSVPRQHWPRLSFKREQAG
Ga0308175_1000308745	3300031938	Soil	VRLDRKLLLIAPAIVLVFVAAGIAYTAFQLHVLGAGSDTWKGRSDFIASVERGEKPLDQHQAVGLLRVALEVEEKRSLAIAASRDLLIMLSLVELAACVVLAFGIRSVPREHWPRLNLSRNREA
Ga0308175_1000972023	3300031938	Soil	VRLDRKLLLIAPAIVLFFVVAGMGYAAFQMHVLGSVSDTWKERSDFIASVERGDKTLSQQQAMGLLRYALEVESKRTGAIAASRDLLVVLAAIALVACGVLAFGIRAVPREHWPRLGFGRGRDG
Ga0308175_1003285273	3300031938	Soil	VRLDRKLLLIAPTIVLVCVVAGLLYATLQLHILTDVSSTWKERSDFVSAVQRGEKKMNDGQAVNVLRFALDVEAKRTAAILATRDLLVVLSIMALASCAVLAVGIRSVPREHWPRFSFKKDDAG
Ga0308175_1003894841	3300031938	Soil	VRLDRKLLLIAPAIVLVFVAAGIAYAAYQLHVLSSVSSTWKDRSAFVGAVERGEKKLDERQAVNLLGVALQVEERRTAAIVASRDLLIMLSVVEVLCCAVLAFGIRSVPREHWPRLN
Ga0308175_1010567823	3300031938	Soil	VRLDRKLLLIAPAIVLVFVAAGIAFAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLDVALQVEEKRTAAIVASRDLLIMLSLIELACCAVLVFGIRTVPREHWPR
Ga0308174_100575814	3300031939	Soil	LIAPAIVLVFVAAGIAYTAFQLHVLGAGSDTWKGRSDFIASVERGEKPLDQHQAVGLLRVALEVEEKRSLAIAASRDLLIMLSLVELAACVVLAFGIRSVPREHWPRLNLSRNREA
Ga0308174_105360582	3300031939	Soil	VRLDRKLLLIAPAIVLVFVAAGIAYAAYQLHVLSSVSSTWKDRSAFVGAVERGEKKLDERQAVNLLGVALQVEERRTAAIVASRDLLILLSVVEVLCCAVLAFGIRSVPREHWPRLNLNRSAE
Ga0308176_102379253	3300031996	Soil	VRLDRKLLLIAPAIVLVFVAAGIAFAAFQLHVLSDASSTWKERSNFVAAVERGEKKLNERQAVGLLDVALQVEEKRTAAIVASRDLLIMLSLIELACCAVLVFGIRTVPREHWPRLNLTRSAE
Ga0308176_107201943	3300031996	Soil	VRLDRKLLLIAPAIVLVFVAAGIAYAAYQLHVLSSVSSTWKDRSAFVGAVERGEKKLDERQAVNLLGVALQVEERRTAAIVASRDLLIMLSVVEVLCCAVLAFGIRSVPREHWPRLNLSRSAE
Ga0310810_100557024	3300033412	Soil	VRLDRKLLLIAPVIVLFFVAAGMVYAAFQMHVLSSVSDTWQERSDFIASVERGEKTLSQQQAVGLLRYALEVESKRTGALTASRDLVALLGAIALVACGVLAFGIRAVPREHWPRLEFGRRPPEP
Ga0326726_100065767	3300033433	Peat Soil	VRFDRKLLLIAPTVVLFFVAAGLIYAAVQLHVLKSVSESWDDRSDFISAVEAGRLPLDTRQAVGLLRISMDVEARRSAAISATRDLLVSLSMIVFVSCITLVGGIQGVRRQHWPRMSFKGKRLG
Ga0310811_100335435	3300033475	Soil	VRLDRKLLLIAPTIVLFCVAAGLIYAATQLHLLESLGDSWKDRSAFIASVESGQKQIETRQAVTMLRFSLDVEAKRTAAITASRDLLIVLSAIAVVSCAALGIGIRGVPREHWPRFGRARTE
Ga0310811_101697891	3300033475	Soil	VRLDRKLLLIAPTIVLFCVAAGLIYAATQLHLLESLGDSWKDRSAFIASVESGQKQIETRQAVTMLRFSLDVEAKRTAAITASRDLLIVLSATAAMSCVVLGIGIRSVPREHWPRFGRARTE
Ga0316620_115687311	3300033480	Soil	VLFFVAAGLIYAAVQLHVLGSVSATWKERSDFITAVEQGQKVLDTRQAIGLLRLSLDVEARRTAAITASRDLLVALSIIALACCGVLTVGIRSVPREHWPRITFGRGGG
Ga0316624_100317565	3300033486	Soil	VRLDRKLLLIAPTVVLFFVAAGLIYAAVQLHVLGSVSATWKERSDFITAVEQGQKVLDTRQAIGLLRLSLDVEARRTAAITASRDLLVALSIIALACCGVLTVGIRSVPREHWPRITFGRGGG
Ga0326723_0014400_3_341	3300034090	Peat Soil	VRFDRKLLLIAPTVVLFFVAAGLIYAAVQLHVLKSVSESWDDRSDFISAVEAGRLPLDTRQAVGLLRISMDVEARRSAAISATRDLLVSLSMIVFVSCITLVGGIQGVRRKHW
Ga0372943_1009964_2_370	3300034268	Soil	LDRKLLLIAPTVVLFFVVAGMLYAALQLHVLAGVSDSLKDRSDFIAAAERGEKTLSQRQSTGLLRLGIDVEAKRTAAIAASRDLLIALSAISFLACCVLGAGIRSVPREHWPRFTRAPRDSQ
Ga0370497_0202937_195_515	3300034965	Untreated Peat Soil	LLARLIYAATQIHLLGSVSDSWKDRSDYIAAVERGEKPLQPRQAIGLLRLALDVEARRTAAVTASRDLLIELSAIALLCCAVLVFGIRTVPREHWPRMSRGRSSSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091815

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences