NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F091861

Metagenome / Metatranscriptome Family F091861

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F091861
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 63 residues
Representative Sequence MTDSQFELFMMHGGMMSEGLKSEEALAFILRAQLATAEDIAWLVQNRAMSAAAAKVAKENVNG
Number of Associated Samples 62
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 85.05 %
% of genes near scaffold ends (potentially truncated) 17.76 %
% of genes from short scaffolds (< 2000 bps) 64.49 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (77.570 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(32.710 % of family members)
Environment Ontology (ENVO) Unclassified
(73.832 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(96.262 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.95%    β-sheet: 0.00%    Coil/Unstructured: 45.05%
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51015202530354045505560MTDSQFELFMMHGGMMSEGLKSEEALAFILRAQLATAEDIAWLVQNRAMSAAAAKVAKENVNGSequenceα-helicesβ-strandsCoilSS Conf. score
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Predicted 3D Structure

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Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.73
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Structural matches with SCOPe domains



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Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



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Phylogeny

NCBI Taxonomy

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All Organisms
Unclassified
22.4%77.6%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Marine
Seawater
Seawater
Marine Plankton
Surface Seawater
Seawater
Aqueous
Seawater
Marine Surface Water
Marine
Seawater
Salt Marsh
Marine
Marine
Seawater
5.6%12.1%14.0%5.6%4.7%2.8%32.7%15.9%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1007302913300000117MarineSQFELFLMHGGMMSEGLKSEEALAFIMRAELSTAEDIAWLIDKRAKSAAVAKVATQK*
ACM6_100755433300001832Marine PlanktonMTDSQFELFLMHGGMMSEGLKSNEALAFIVRSELATPEDVAWLVEKNAYSAAAAKVAKEKFDG*
GOS2240_101358433300001961MarineMTDSQFELFMMHGGMMSEGLKSNEALAFIIRSGLASAEDISWLVERNAYSAAAAKVAKEKFDG*
Ga0078893_1161685113300005837Marine Surface WaterMEKIGKMTDSQFELFLMHGGMMSEGLKSEEALAFILRADLSTAXXXXXXXIDKRAKSAAVAKVATQK*
Ga0098037_112849613300006737MarineMTDSQFELFMIHGGMMSEGLKSEEALAFILRAELATAEDIAWLVQNRAMGKAAAEVAKREVV*
Ga0070750_1003027253300006916AqueousMTDSQFELFMMHSGMMTEGLKSEEALAFILRARLATPADIAWLVEHRAMSASAAAVAKKEAVNG*
Ga0070750_1008633823300006916AqueousMEKIGKMTDSQFELFLMHGGMMSEGLKSEEALAFIMRAELSTAEDIAWLIDKRAKSAAVAKVATQK*
Ga0075463_1004683443300007236AqueousMTDSQFELFMMHNGMMTEGLKSEEALAFILRARLATPADIAWLVEHRAMSASAAAVAKKEAVNG*
Ga0115104_1113092323300009677MarineMTDSQFELFMIHGGMMSEGLKSNEALAFIMRAELATAADIAWLVERHTFSKAAANVAKESING*
Ga0115012_1006605233300009790MarineMTDSQFELFMMHGGMMSEGLKSNEALAFIIRSGLASAEDVSWLVERNAYSAAAAKVAKEKFDG*
Ga0115012_1061384333300009790MarineMTDSQFDLFLIHGGMMAEGLKSEEALAFIVRSQLATAEDVAWLVEHRAMSAAAAKVAKEKLHG*
Ga0115012_1092889313300009790MarineMTDSQFELFMMHGGMMSEGLKSEEALAFILRAQLATAEDIAWLVERHSFSKAAADVARKEAVNG*
Ga0115012_1194223923300009790MarineMTDTQFDLFMIHGGMMSEGLKSEEALAFILRSQLATPEDIAWLVEHRAISAAAAKVAKEKLHG*
Ga0138370_107325813300011311MarineFELFMMHGGMMSEGLKSNEALAFIIRSGLASAEDISWLVERNAFSKAAAEVAKQK*
Ga0160422_1002405553300012919SeawaterMTDSQFDLWMIHGGMMAEGLKSEEALAFIVRSKLATAADVAWLVEHRAMSQAAAKVAKEKLHG*
Ga0160422_1015702723300012919SeawaterMTDTQFDLFMIHGGMMREGLKSEEALAFILRSKLATPEDIAWLVEHRAMSQAAAKVAKEKLHG*
Ga0160422_1023080433300012919SeawaterMTDSQFDLWMIHGGMMAEGLKSEEALAFIVRSKLATAEDVAWLVEHRAMSQAAAKVAKEKLHG*
Ga0160422_1057312523300012919SeawaterMTDTQFDLWMIHGGMMAEGLKSEEALAFIVRSKLATAADVAWLVEHRAMSQAAAKVAKERLHG*
Ga0160422_1063789233300012919SeawaterMIMTDSQFELFMMHGGMMSEGLKSNEALAFIIRSGLASAEDISWLVERNAYSAAAAKVAKEKFDG*
Ga0160422_1102528213300012919SeawaterRYFMTDSQFDLWMIHGGMMAEGLKSEEALAFILRSQLATAEDVAWLVEHRAMSAAAAKVAKEKLHG*
Ga0160423_1001890823300012920Surface SeawaterMTDSQFDLWMIHGGMMAEGLKSEEALAFIVRSELATAADVAWLVEHRAMSQAAAKVAKERLHG*
Ga0160423_1002384063300012920Surface SeawaterMTDTQFDLFLIHGGMMREGLKSEEALAFILRSKLATAEDVAWLVEHRAMSDAAAKVAKERLHG*
Ga0160423_1002838963300012920Surface SeawaterMTDTQFDLFMIHGGMMSEGLKSEEALAFILRSQLASAEDIAWLVEHRAMSAAAAKVAKEKLHG*
Ga0160423_1009963323300012920Surface SeawaterMTDSQFELFTMHGGMMAEGLKSEEALAFIMRAELSTPEDIFWLMEKRAKGAAAAKVAKESLNG*
Ga0160423_1024991623300012920Surface SeawaterMETVGTMTDSQFELFMMHGGMMSEGLKSEEALAFILRAQLATTEDIAWLVDKRAKSAAVAKVAKQK*
Ga0160423_1027679123300012920Surface SeawaterMETVGTMTDSQFELFMMHGGMMSEGLKSEEALAFILRAQLATAEDIAWLVDKRAKSAAVAKVATQK*
Ga0160423_1032155233300012920Surface SeawaterMTDSQFELFMMHSGMMAEGLKSEEALAFILRAELATAEDIAWLVQNRAMSAAATKVAKEKLYG*
Ga0160423_1079860313300012920Surface SeawaterMMHGGMMSEGLKSNEALAFIIRSGLASAEDVSWLVERNAYSAAAAKVAKEKFDG*
Ga0160423_1087509913300012920Surface SeawaterMTDSQFDLWMIHGGMMAEGLKSEEALAFIVRSKLATAADVAWLVEHRAMSQAAAKVAKERLHG*
Ga0163110_1023955733300012928Surface SeawaterMETVGTMTDSQFELFMMHSGMMSEGLKSEEALAFILRAQLATAEDISWLVDKRAKSAAVAKVATQK*
Ga0163110_1036773723300012928Surface SeawaterMIMTDSQFELFMMHGGMMSEGLKSNEALAFIIRSGLASAEDVSWLVERNAYSAAAAKVAKEKFDG*
Ga0163110_1039480323300012928Surface SeawaterMTDSQFDLWMIHGGMLAEGLKSEEALAFIVRSQLATAADVAWLVEHRAMSQAAAKVAKERLHG*
Ga0163110_1054125723300012928Surface SeawaterMTDTQFDLFMIHGGMMREGLKSEEALAFILRSKLATPEDIAWLVEHRAMSQAAAKVAKERLHG*
Ga0163110_1128555113300012928Surface SeawaterMTDTQFDLFLIHGGMMREGLKSEEALAFILRSKLATPEDVAWLVEHRAMSQAAAK
Ga0163109_1058986323300012936Surface SeawaterMTDSQFELFMMHSGMMAEGLKSEEALAFILRAELATAEDIAWLVQNRAMSAAATKVAKEK
Ga0163180_10004407123300012952SeawaterMTDSQFELFMIHGGMMSEGLKSEEALAFILRAELASAEDIAWLVERNAFSKAAADVAKKEVVNG*
Ga0163180_1002220023300012952SeawaterMTDTQFDLFLIHGGMMSEGLKSEEALAFILRAQLASAEDIAWLVEHRAMSAAAAKVAKEKLHG*
Ga0163180_1011551823300012952SeawaterMIMTDSQFELFMMHGGMMSEGLKSEEALAFILRGQLASAADIAWLVERHTFSKAAARVAKESIDGER*
Ga0163180_1014073623300012952SeawaterMTDSQFELFIIHSGMMSEGLKSEEALAFILRAELATAADIAWLVEHRAMSAAAASVAKKEVMNG*
Ga0163180_1020059933300012952SeawaterMTDKQFELFLMHGGMMSEGLKSEEALAFLIRMGTDAGDITWLVEKLAIASAAGKVATDQTQ*
Ga0163180_1020500323300012952SeawaterMTDKQFELFIMHGGMMQEGLKSEEALAFLLRMGTEAEDIAWLVEKLATKNAAAKVAVEQTQ*
Ga0163180_1023988923300012952SeawaterMTDSQFELWMIHGGMMAEGLKSEEALAFILRSKLATAEDIAWLVQNRAMSQAAAKVAKEKLHG*
Ga0163180_1099643523300012952SeawaterMTDSQFELFMMHGGMMSEGLKSEEALAFILRGQLATAADIAWLVERHTFSKAAARVAKESIDGER*
Ga0163179_1002792333300012953SeawaterMTDSQFEVFMMHGGMMREGLKSEEALAFILSAELATAEDIAWLVERHTFSVAAARVAKEKQNG*
Ga0163179_1003696293300012953SeawaterMTDSQFELFIMHGGMMQEGLKSEEALAFILRADLATAADIAWLVEHRAMGAAAASAAKEAVNG*
Ga0163179_1005122313300012953SeawaterMTESQFELFMIHSGMMSEGLKSEEALAFILRAELSTAEDIAWLVHNRAMSAAAANVAKESING*
Ga0163179_1090993123300012953SeawaterMTDSQFELFMIHGGMMSEGLKSEEALAFILRAELATAEDIAWLVQNRAMSAAAAKVAKERVNG*
Ga0163179_1224624513300012953SeawaterMTDSQFEVFMMHGGMMSEGLKSEEALAFILRGQLATAEDIAWLVERHTFSKAAARVAKESINGER*
Ga0181403_109358713300017710SeawaterMTNSQFDLFIMHSGMMQEGLKSEEALAFILKTKLSTAKDIAWLVEHRAMSAAAASVAKEA
Ga0181383_116176523300017720SeawaterMTDSQFELFMIHGGMMSEGLKSNEALSFIMRAELATAADIAWLVERHTFSKAAANVAKESING
Ga0181426_104204723300017733SeawaterMTDSQFELFMMHGGMMSEGLKSEEALAFILRAQLATAEDIAWLVEHRAMSAAAASVAKKEVMNG
Ga0181426_109950913300017733SeawaterMTNSQFDLFIMHSGMMQEGLKSEEALAYILRTGLSTAADIAWLVEHRAMSAAAAKVVKEAANG
Ga0181402_100545733300017743SeawaterMTDSQFELFIMHGGMMTEGLKSEEALAFILHADLATAKDVAWLVERHSFSKAAAEVAKQK
Ga0181411_1004643113300017755SeawaterMTNSQFDLFIMHSGMMQEGLKSEEALAYILRTGLSTAADIAWLVEHRAMSAAAASIAKEAVNG
Ga0181409_112058923300017758SeawaterSTIFGEAMTDSQFELFMIHGGMMSEGLKSNEALSFIMRAELASAEDIAWLVSNRAYSIAASKAAKESVNG
Ga0181422_1003721123300017762SeawaterMTDSQFELFMMHGGMMSEGLKSEEALAFILRAQLATAEDIAWLVQNRAMSAAAA
Ga0181413_113434913300017765SeawaterQFELFTMHSGMMMEGLKSEEALAFILRAELASAEDIAWLVSNRAYSIAASKAAKESVNG
Ga0181425_100976293300017771SeawaterMTESQFELFTMHSGMMMEGLKSEEALAFILRAELASAEDIAWLVSNRAYSIAASKAAKESVNG
Ga0181425_102153643300017771SeawaterMTNSQFDLFIMHSGMMQEGLKSEEALAFILKTKLSTAKDIAWLVEHRAMSAAAAKVVKEAANG
Ga0181423_115231923300017781SeawaterYNIRMLREKRMTNSQFELFIMHSGMMQEGLKSEEALAYILRTGLSTAADIAWLVEHRAMSAAAASIAKEAVNG
Ga0181380_103595543300017782SeawaterMTDSQFELFMMHSGMMSEGLKSEEALAFILRGQLATAEDIAWLVQNRAMSAAAAKV
Ga0181379_105402323300017783SeawaterMTDSQFELFIIHSGMMSEGLKSEEALAFILRAQLATAEDIAWLVQNRAMSAAAAKVAKENVNG
Ga0181553_1002597133300018416Salt MarshMTDSQFELFTMHGGMMAEGLKSEEALAFIMQAELSTPEDIFWLMEKRAKSAAATKVAKESLNG
Ga0211707_101140623300020246MarineMTDTQFDLFMIHGGMMSEGLKSEEALAFILRSQLASAEDIAWLVEHRAMSAAAAKVAKEKLHG
Ga0211586_100268223300020255MarineMTDTQFDLFIMHGGMMQEGLKSEEALAFLLRMGTDAGDITWLVERLATKNAAAKVAAEQT
Ga0211519_1004486103300020266MarineMTDSQFELFIIHSGMMSEGLKSEEALAFILRTELATPADIAWLVENRAMSAAAASVAKKEVMNG
Ga0211658_103264823300020274MarineMTESQFELFMMHSGMMSEGLKSEEALAFILRGELATAEDIAWLVHNRAMSAAAANVAKESING
Ga0211520_104773813300020294MarineFIMHGGMMTEGLKSEEALAFILHADLATAEDVAWLVERHSFSKAAAEVAKQK
Ga0211474_100533443300020296MarineMTDSQFELFIMHGGMMTEGLKSEEALAFILHADLATAEDVAWLVERHSFSKAAAEVAKQK
Ga0211508_107448423300020337MarineMTDSQFELFMMHSGMMSEGLKSEEALAFILRARLATPADIAWLVEHRAMSASAAAVAKKEAVNG
Ga0211703_1016464333300020367MarineTNMTDTQFDLFMIHGGMMSEGLKSEEALAFILRSQLASAEDIAWLVEHRAMSAAAAKVAKEKLHG
Ga0211703_1018637313300020367MarineMTDSQFELFMMHGGMMSEGLKSNEALAFIIRSGLASAEDISWLVERNAFSKAAAEVAKQK
Ga0211477_1000457553300020374MarineMTDSQFELFMMHGGMMSEGLKSEEALAFILRGQLATAADIAWLVERHTFSKAAARVAKESIDGER
Ga0211647_1026576823300020377MarineMTESQFELFMMHSGMMSEGLKSEEALAFILRGELATAEDIAWLVHNRAMSAAAANVAKEKLNG
Ga0211497_1001326423300020394MarineMTDSQFELFMMHGGMMSEGLKSEEALAFILRGQLASAEDIAWLVERHTFSKAAARVAKESIDGEG
Ga0211497_1005015123300020394MarineMETVGTMTDSQFELFMMHGGMMSEGLKSEEALAFILRAQLATAEDIAWLVDKRAKSAAVAKVATQK
Ga0211583_1007305013300020397MarineMETVGTMTDSQFELFMMHSGMMSEGLKSEEALAFILRGQLATAEDIAWLVDKRAKSAAVAKVATQK
Ga0211636_1024060013300020400MarineMIHGGMMAEGLKSEEALAFIVRSKLATAEDVAWLVEHRAMSAAAAKVAKERLHG
Ga0211659_1001201023300020404MarineMTDSQFDLWMIHGGMMAEGLKSEEALAFIVRSKLATASDVAWLVEHRAMSQAAAKVAKERLHG
Ga0211702_1012978013300020422MarineIHGGMMAEGLKSEEALAFIVRSKLATAEDVAWLVEHRAMSQAAAKVAKERLHG
Ga0211521_1003627413300020428MarineLTDSQFELFMIHGGMMSEGLKSEEAFAFIIRSELASAADVAWLIEHRAKSAAAAHIAKEKGYGS
Ga0211708_1003958543300020436MarineLTDSQFELFMIHGGMMSEGLKSEEALAFIIRSDLATAADVAWLVEHRAKSAAAAHIAKEKGYGS
Ga0211708_1012590723300020436MarineMTDSQFDLWMIHGGMMAEGLKSEEALAFIVRSQLATPEDVAWLVEHRAMSQAAAKVAKEKLHG
Ga0211708_1018883223300020436MarineMTDSQFDLWMIHGGMMAEGLKSEEALAFIVRSKLATAADVAWLVEHRAMSAAAAKVAKEKLHG
Ga0211576_1001290373300020438MarineMTDSQFELFMIHGGMMSEGLKSEEALAYIFRGQLGSTEDIFWLMERNAYSRAATEASATKVATQK
Ga0211559_1001167153300020442MarineMTDSQFELFMMHSGMMAEGLKSEEALAFILRAQLATAEDIAWLVQNRAMSAAATKVAKEKLHG
Ga0211641_1002680133300020450MarineMTDTQFDLWMIHGGMMAEGLKSEEALAFIVRSKLATAEDVAWLVEHRAMSQAAAKVAKERLHG
Ga0211641_1005530623300020450MarineMTDSQFELFMMHGGMMSEGLKSNEALAFIIRSGLASAQDISWLVERNAFSKAAAEVAKQK
Ga0211664_1021699423300020455MarineMHGGMMAEGLKSEEALAFIMRAELSTPEDIFWLMDKRAKSIAAAKVAKERLNG
Ga0211676_10010628103300020463MarineMTDSQFELFIMHSGMMSEGLKSEEALAFILRAELATAADIAWLVEHRAMSAAAASVAKKEVMNG
Ga0211676_1043400723300020463MarineMTDSQFELFMIHGGMMSEGLKSNEALAFIMRAELATAADIAWLVERHTFSKAAANVAKESING
Ga0211577_1072938123300020469MarineMTESQFELFMIHGGMMSEGLKSEEALAFILRGQLATAEDIAWLVQNRAMSAAAAKVAKESING
Ga0211577_1077731913300020469MarineMTDSQFELFIMHGGMMTEGLKSEEALAFILHAELATAQDVAWLVERHSFSKAAAEVAKQK
Ga0211614_1015814733300020471MarineMTDKQFELFLMHGGMMSEGLKSEEALAFLIRMGTDAGDITWLVEKLAVASAAGKVATDQT
Ga0211614_1039212113300020471MarineSMTDSQFELFMMHGGMMSEGLKSEEALAFILHADLATAEDVAWLVERHTFSKAAAEVAKQ
Ga0213867_1000324373300021335SeawaterMTDSQFELFMMHNGMMTEGLKSEEALAFILRARLATPADIAWLVEHRAMSASAAAVAKKEAVNG
Ga0224906_1000130223300022074SeawaterMTDSQFELFMMHGGMMSEGLKSEEALAFILRAQLATAEDIAWLVQNRAMSAAAAKVAKENVNG
Ga0224906_1000524243300022074SeawaterMTDSQFELFMMHSGMMSEGLKSEEALAFVLRARLATPADIAWLVEHRAMSASAAAVAKKEAVNG
Ga0224906_107262523300022074SeawaterVSLYNIRMLREKRMTNSQFELFIMHSGMMQEGLKSEEALAYILRTGLSTAADIAWLVEHRAMSAAAASIAKEAVNG
Ga0208899_117463323300025759AqueousMEKIGKMTDSQFELFLMHGGMMSEGLKSEEALAFIMRAELSTAEDIAWLIDKRAKSAAVAKVATQK
Ga0208767_114127723300025769AqueousMTDSQFELFMMHSGMMTEGLKSEEALAFILRARLATPADIAWLVEHRAMSASAAAVAKKEAVNG
Ga0183755_100571973300029448MarineMTDSQFELFIIHGGMMTEGLKSEEALAFILHADLATAEDVAWLVERHSFSKAAAEVAKQK
Ga0183826_100488513300029792MarineMETVGTMTDSQFELFMMHSGMMSEGLKSEEALAFILRAQLATAEDIAWLVDKRAKSAAVAKVATQK
Ga0310343_1036378623300031785SeawaterMTDSQFDLWMIHGGMMAEGLKSEEALAFILRSQLATAEDIAWLVEHRAMSAAAAKVAKEKLHG
Ga0315320_1011451623300031851SeawaterMTNSQFDLFIMHSGMMQEGLKSEEALAFILKTKLSTAKDIAWLVEHRAMSAAAASVAKEAVNG
Ga0315330_1000624333300032047SeawaterMTDSQFELFIIHSGMMSEGLKSEEALAFILRAELATAADIAWLVEHRAMSAAAASVAKKEVMNG
Ga0315330_1046577313300032047SeawaterSQFELFMMHGGMMSEGLKSEEALAFILRGQLATAADIAWLVERHTFSKAAARVAKESINGER


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