Metagenome / Metatranscriptome Family F092003

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092003
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	134 residues
Representative Sequence	MTLSLSRSVTATAGLIAAGWLLSACSNTSTPEAGALGTGGAEPSAIALETSNQSVIVTNNAGKPIEDVRIAIQPFGAAPAFTSTLRRMENAEKREISLAQFRSNDGTTFSPRLTKARQVTVTATDIVGKKHEVTKAWTH
Number of Associated Samples	94
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.25 %
% of genes near scaffold ends (potentially truncated)	41.12 %
% of genes from short scaffolds (< 2000 bps)	86.92 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.355 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (9.346 % of family members)
Environment Ontology (ENVO)	Unclassified (49.533 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.617 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 1.80% β-sheet: 31.74% Coil/Unstructured: 66.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02518	HATPase_c	13.08
PF13520	AA_permease_2	7.48
PF12796	Ank_2	3.74
PF12833	HTH_18	3.74
PF01261	AP_endonuc_2	3.74
PF10518	TAT_signal	3.74
PF10282	Lactonase	2.80
PF13185	GAF_2	1.87
PF13606	Ank_3	1.87
PF00165	HTH_AraC	1.87
PF08241	Methyltransf_11	0.93
PF07617	DUF1579	0.93
PF12867	DinB_2	0.93
PF00069	Pkinase	0.93
PF00903	Glyoxalase	0.93
PF06452	CBM9_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.22 %
Unclassified	root	N/A	31.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.22 %
Unclassified	root	N/A	31.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.36 %
Unclassified	root	N/A	31.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.87 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.93 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.61 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	4.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.87 %
Candidatus Lokiarchaeota	phylum	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	0.93 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.78 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	4.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	2.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.87 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.93 %
unclassified Lokiarchaeota	no rank	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.93 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.93 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	2.80 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.87 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.93 %
Veillonellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales	0.93 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	0.93 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.93 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	2.80 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.93 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.93 %
Lamprocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis	0.93 %
Veillonellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae	0.93 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.93 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.93 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	2.80 %
Actinoallomurus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus	0.93 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.93 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.93 %
Halogeometricum	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Halogeometricum	0.93 %
Lamprocystis purpurea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea	0.93 %
Megasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera	0.93 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.78 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	4.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	2.80 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.93 %
Megasphaera massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera → Megasphaera massiliensis	0.93 %
Halogeometricum borinquense	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Halogeometricum → Halogeometricum borinquense	0.93 %
Actinoallomurus spadix	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus spadix	0.93 %
Myxococcales bacterium 68-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	0.93 %
Lamprocystis purpurea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea	0.93 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459007\|GJ61VE201DMQQG	Not Available	512	Open in IMG/M
3300004480\|Ga0062592_100712103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300005330\|Ga0070690_100882991	Not Available	698	Open in IMG/M
3300005332\|Ga0066388_100283645	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300005334\|Ga0068869_100286261	All Organisms → cellular organisms → Bacteria → Proteobacteria	1326	Open in IMG/M
3300005335\|Ga0070666_10957162	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300005335\|Ga0070666_11159153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Veillonellales → Veillonellaceae → Megasphaera → Megasphaera massiliensis	575	Open in IMG/M
3300005338\|Ga0068868_100571004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	999	Open in IMG/M
3300005340\|Ga0070689_100826496	Not Available	816	Open in IMG/M
3300005353\|Ga0070669_100109145	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300005355\|Ga0070671_101007064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	730	Open in IMG/M
3300005367\|Ga0070667_101753109	Not Available	584	Open in IMG/M
3300005544\|Ga0070686_100328460	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300005547\|Ga0070693_100554955	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300005548\|Ga0070665_100001433	All Organisms → cellular organisms → Bacteria	27947	Open in IMG/M
3300005617\|Ga0068859_102958434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea	520	Open in IMG/M
3300005713\|Ga0066905_100675670	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005764\|Ga0066903_104639074	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005834\|Ga0068851_10046927	All Organisms → cellular organisms → Bacteria	2186	Open in IMG/M
3300005841\|Ga0068863_101116708	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005843\|Ga0068860_100508246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1204	Open in IMG/M
3300005843\|Ga0068860_100619294	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300005937\|Ga0081455_10452673	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300006041\|Ga0075023_100277266	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006577\|Ga0074050_11677326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2595	Open in IMG/M
3300006578\|Ga0074059_11053950	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300006579\|Ga0074054_10280200	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300006604\|Ga0074060_11968861	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300006844\|Ga0075428_100485897	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300006844\|Ga0075428_101239741	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300006854\|Ga0075425_100707455	Not Available	1157	Open in IMG/M
3300006854\|Ga0075425_102366794	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Halogeometricum → Halogeometricum borinquense	590	Open in IMG/M
3300006871\|Ga0075434_100239406	All Organisms → cellular organisms → Bacteria → Acidobacteria	1835	Open in IMG/M
3300006881\|Ga0068865_100084389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2289	Open in IMG/M
3300007076\|Ga0075435_100093469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2485	Open in IMG/M
3300009012\|Ga0066710_101136841	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1208	Open in IMG/M
3300009094\|Ga0111539_10943543	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300009137\|Ga0066709_101730914	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300009148\|Ga0105243_11576357	Not Available	683	Open in IMG/M
3300009148\|Ga0105243_12780071	Not Available	530	Open in IMG/M
3300009156\|Ga0111538_10297778	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300010043\|Ga0126380_11371994	Not Available	619	Open in IMG/M
3300010047\|Ga0126382_10397903	Not Available	1074	Open in IMG/M
3300010359\|Ga0126376_13100117	Not Available	514	Open in IMG/M
3300010397\|Ga0134124_11105795	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300010400\|Ga0134122_10121274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20	2095	Open in IMG/M
3300010401\|Ga0134121_10074131	All Organisms → cellular organisms → Bacteria	2819	Open in IMG/M
3300010401\|Ga0134121_12170521	Not Available	592	Open in IMG/M
3300010403\|Ga0134123_10696018	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300012201\|Ga0137365_10035829	All Organisms → cellular organisms → Bacteria	3798	Open in IMG/M
3300012212\|Ga0150985_103884457	Not Available	528	Open in IMG/M
3300012212\|Ga0150985_104776088	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300012353\|Ga0137367_10160015	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300012355\|Ga0137369_10250017	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300012469\|Ga0150984_118549557	Not Available	640	Open in IMG/M
3300012486\|Ga0157331_1009975	Not Available	686	Open in IMG/M
3300012532\|Ga0137373_10316397	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300012930\|Ga0137407_11948383	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012944\|Ga0137410_10321351	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300012957\|Ga0164303_10108957	Not Available	1389	Open in IMG/M
3300012961\|Ga0164302_10322278	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300014968\|Ga0157379_11890603	Not Available	588	Open in IMG/M
3300014969\|Ga0157376_10215855	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300015245\|Ga0137409_10256851	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300015372\|Ga0132256_100572202	Not Available	1243	Open in IMG/M
3300015373\|Ga0132257_101736838	Not Available	800	Open in IMG/M
3300016319\|Ga0182033_11935782	Not Available	536	Open in IMG/M
3300016404\|Ga0182037_10111821	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300017792\|Ga0163161_10396830	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1105	Open in IMG/M
3300017792\|Ga0163161_10895406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300019996\|Ga0193693_1061569	Not Available	572	Open in IMG/M
3300020034\|Ga0193753_10185379	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300025321\|Ga0207656_10236383	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300025321\|Ga0207656_10261819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	849	Open in IMG/M
3300025899\|Ga0207642_10341500	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300025901\|Ga0207688_10262124	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300025903\|Ga0207680_10623018	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300025913\|Ga0207695_11269118	Not Available	617	Open in IMG/M
3300025923\|Ga0207681_10066176	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300025924\|Ga0207694_11801808	Not Available	514	Open in IMG/M
3300025934\|Ga0207686_10812470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	750	Open in IMG/M
3300025936\|Ga0207670_10110713	All Organisms → cellular organisms → Bacteria	1979	Open in IMG/M
3300025936\|Ga0207670_10471299	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300025972\|Ga0207668_11766093	Not Available	558	Open in IMG/M
3300025986\|Ga0207658_10969811	Not Available	775	Open in IMG/M
3300026035\|Ga0207703_11497930	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300026088\|Ga0207641_12580871	Not Available	506	Open in IMG/M
3300026089\|Ga0207648_10173961	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300027907\|Ga0207428_10174314	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300027910\|Ga0209583_10320318	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300028293\|Ga0247662_1070212	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	621	Open in IMG/M
3300028381\|Ga0268264_10452598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1244	Open in IMG/M
3300028381\|Ga0268264_10643409	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300028381\|Ga0268264_11105470	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300031200\|Ga0307496_10031274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinoallomurus → Actinoallomurus spadix	826	Open in IMG/M
3300031226\|Ga0307497_10289346	Not Available	747	Open in IMG/M
3300031231\|Ga0170824_105215124	Not Available	531	Open in IMG/M
3300031474\|Ga0170818_108124785	Not Available	573	Open in IMG/M
3300031564\|Ga0318573_10528252	Not Available	635	Open in IMG/M
3300031679\|Ga0318561_10012211	All Organisms → cellular organisms → Bacteria	3779	Open in IMG/M
3300031720\|Ga0307469_11611769	Not Available	624	Open in IMG/M
3300031908\|Ga0310900_11904589	Not Available	507	Open in IMG/M
3300031941\|Ga0310912_10304562	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300032091\|Ga0318577_10623107	Not Available	512	Open in IMG/M
3300032180\|Ga0307471_101116316	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300034662\|Ga0314783_145029	Not Available	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.47%
Host-Associated	Host-Associated	49.53%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	49.53%
Terrestrial	Environmental → Terrestrial	48.60%
Aquatic	Environmental → Aquatic	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.36%
Sediment	Environmental → Aquatic → Sediment	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L02_05408130	2170459007	Grass Soil	MTLSLLRSVPATAGLLAAGWLLSACANTATSEAGALGTSGAEPSVIALQTSNQSVIVTNNAGKPIEDVVIAIQAFGTAPPFTSTLRRMENAETREISLSQFRSRDGTTFSPRLTKARQVTVTATDIVGKK
Ga0062592_1007121032	3300004480	Soil	MTLSRRRSVITTVGLIAASWLLSACSNQSAPETRPLGTGGVEPATIALETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRHVKVTATDIVGKKHEITRPWGS*
Ga0070690_1008829911	3300005330	Switchgrass Rhizosphere	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGSQDSEIAVEASNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTSLRRMENAERREISLAQFRSNDGTTFSPRLTKARQLTVTATDIVGKKHELTRAWPR*
Ga0066388_1002836452	3300005332	Tropical Forest Soil	MNLSRRRSVIAALASIAASCLFCACSTQVAPEAGSLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPWKP*
Ga0068869_1002862612	3300005334	Miscanthus Rhizosphere	MTLSLTRSVTVTAGLIAAGWLLSACTNTSTPEAGALGTSGLEPSVIALETSNQSVTITNNAGKPIEDVRIAIQPVGTVPAFTSTLRRMENAERREISLAQFRSNDGTTFSPRLTKARQVTVTAIDIVGKKHEVTRAWAH*
Ga0070666_109571622	3300005335	Switchgrass Rhizosphere	AAGWLFSACANTATSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTRAWAP*
Ga0070666_111591531	3300005335	Switchgrass Rhizosphere	MTLSLLRSVPATAGLIAAGWLFSACANTATSEAGALGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPAGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAP*
Ga0068868_1005710042	3300005338	Miscanthus Rhizosphere	WLLSACSNASTQEPGATGTGGSQDSEIAVEASNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTSLRRMENAERREISLAQFRSNDGTTFSPRLTKARQLTVTATDIVGKKHELTRAWPR
Ga0070689_1008264962	3300005340	Switchgrass Rhizosphere	MTLSRRRSVFATIGFIAATWLLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTNNAGKPIEDILIAIKPVGVAPPFTLTVRRMENAEKRDISVGQFRSNDGTTFSPRLYTPRQVTVTATDIVGKKHEITKPWKP*
Ga0070669_1001091453	3300005353	Switchgrass Rhizosphere	SVITTVGLIAASWLLSACSNQSAPETRPLGTGGVEPATIALETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRHVKVTATDIVGKKHEITRPWGS*
Ga0070671_1010070642	3300005355	Switchgrass Rhizosphere	LLSACSNASTQEPGATGTGGSQDSEIAVEASNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTSLRRMENAERREISLAQFRSNDGTTFSPRLTKARQLTVTATDIVGKKHELTRAWPR*
Ga0070667_1017531092	3300005367	Switchgrass Rhizosphere	GLIAAGWLLSACANTSTSEAGALATSGVEPSAIALQTSNQSVIVTNNAGKPIEDVVIAIQAVGNAPPFTSTLRRMENAEKREISLSQFRSRDGTTFSPRLTKARQVTVTATDIVGKKHEVTTAWAR*
Ga0070686_1003284602	3300005544	Switchgrass Rhizosphere	MTLSRRRSVFATIGFIAATWLLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTNNAGKPIEDILIAIKPVGVAPPFTLTVRRMENAEKRDISVGQFRSNDGTTFSPRLYKPRHVK
Ga0070693_1005549551	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTLSLLRSVPATAGLIAAGWLFSACANTATSEAGALGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPVGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAP*
Ga0070665_10000143327	3300005548	Switchgrass Rhizosphere	MTLSLLRSVPATAGLLAAGWLFSACANTATSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTRAWAP*
Ga0068859_1029584341	3300005617	Switchgrass Rhizosphere	MTLSLTRSVTVTAGLIAAGWLLSACTNTSTPEAGALGTSGLEPSVIALETSNQSVTITNNAGKPIEDVRIAIQPVGTVPAFTSTLRRMENAERREISLAQFRSNDGTTFSPRLTKARQVTVTATDIVGKKHEVTRAWAP
Ga0066905_1006756702	3300005713	Tropical Forest Soil	VASIAASCLFCACSTQVAPEAGSLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGAKHEITKPWKP*
Ga0066903_1046390742	3300005764	Tropical Forest Soil	MTLSLRRSVTATAGLIAAGWLLSACSNVSTQEPGATGTGGTQDSEIAVETSNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTATLRRMENAEKREISLAQFRSNDGTTFSPRLTKARQVT
Ga0068851_100469272	3300005834	Corn Rhizosphere	MTLSLLRCVPATTGLIAAGWLLSACANTSTSEAGALATSGVEPSAIALQTSNQSVIVTNNAGKPIEDVVIAIQAVGNAPPFTSTLRRMENAEKREISLSQFRSRDGTTFSPRLTKARQVTVTATDIVGKKHEVTTAWAR*
Ga0068863_1011167082	3300005841	Switchgrass Rhizosphere	MTLSLTRSVTVTAGLIAAGWLLSACTNTSTPEAGALGTSGLEPSVIALETSNQSVTITNNAGKPIEDVRIAIQPVGTVPAFTSTLRRMENAERREISLAQFRSNDGTTFSPRLTKARQVTVTAI
Ga0068860_1005082461	3300005843	Switchgrass Rhizosphere	SACANTATSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTRAWAP*
Ga0068860_1006192942	3300005843	Switchgrass Rhizosphere	MTLSLLRSVSATAGLIAAGWLFSACANTATSEAGALGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPAGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAP*
Ga0081455_104526732	3300005937	Tabebuia Heterophylla Rhizosphere	MNLSRRRSVIATLASIAASCLFCACSTQVAPEAGSLGTGGVGPATIALETSNQSVTVTNNAGKPIEDVLISIQPVGIAPPFTLTLRRLENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGAKHEITK
Ga0075023_1002772662	3300006041	Watersheds	MTLSLSRSVTATAGLIAAGWLLSACSNTSTPEAGALGTGGAEPSAIALETSNQSVIVTNNAGKPIEDVRIAIQPFGAAPAFTSTLRRMENAEKREISLAQFRSNDGTTFSPRLTKARQVTVTATDIVGKKHEVTKAWTH*
Ga0074050_116773264	3300006577	Soil	MTLSLRRSVTAIATLIAAGWLLSACSSASTQEPGATGTGGTANSAISVETSNQSVTVTNNAGKPMEDVRIAIQPFGNAPAFTSTLRRLENAEKREISLAQFRSNDGTTFSPRLTKARQVTVTATDIVGQKHELTVPWAR*
Ga0074059_110539503	3300006578	Soil	MTLSLRRSVTAIATLIAAGWLLSACSSASTQEPGATGTGGTANSAISVETSNQSVTVTNNAGKPMEDVRIAIQPFGNAPAFTSNLRRLENAEKREISLAQFRSNDGTTFSPRLTKARQVTVTATDIVGQKHELTVPWAR*
Ga0074054_102802002	3300006579	Soil	MDSLSVLELSLRRSVTAIATLIAAGWLLSACSSASTQEPGATGTGGTANSAISVETSNQSVTVTNNAGKPMEDVRIAIQPFGNAPAFTSTLRRLENAEKREISLAQFRSNDGTTFSPRLTKARQVTVTATDIVGQKHELTVPWAR*
Ga0074060_119688613	3300006604	Soil	MTLSLRRSVTAIATLIAAGWLLSACSSASTQEPGATGTGGTANSAISVETSNQSVTVTNNAGKPMEDVRIAIQPFGNAPAFTSTLRRLENAEKREISLAQFRSNDGTTFSPRLTKARQVTVTATD
Ga0075428_1004858972	3300006844	Populus Rhizosphere	MSLSRRRSVIGTVGLIVASWLLSACSNQAAPEAQPLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGAKHEITKPWKP*
Ga0075428_1012397412	3300006844	Populus Rhizosphere	MTLSRRRSVIVTVGLIAASWLLSACSNQSAPETRPLGTGGAEPAAIALETSNQSVTVTNNAGKPIEEVLIAIQPVGIAPPFTLTLRRMENAEKRDISVGQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPWKP*
Ga0075425_1007074552	3300006854	Populus Rhizosphere	VIGTVGLIVASWLLSACSNQAAPEAQPLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGAKHEITKPWKP*
Ga0075425_1023667941	3300006854	Populus Rhizosphere	MTLSRRRSVIATVLIAASWLLSGCSNQSAPETRPLGTGGVEPPAIGLETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLSVRRMENAEKRDISVGQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPWKP*
Ga0075434_1002394063	3300006871	Populus Rhizosphere	MTLSLRRSVTAITALIAASWLLSACSSTGTTEAGALGTSGVGPTTIAIDTSNQFVVAVTNNAGQPLENVRIAIQPVGTVPAFTATIRRMENSERRELSLNEFRSNDGTTFTPRVYRARQVTVTATDLVGKKHEVTKPWGR*
Ga0068865_1000843891	3300006881	Miscanthus Rhizosphere	LFSACANTATSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTRAWAP*
Ga0075435_1000934694	3300007076	Populus Rhizosphere	RSVIGTVGLIVASWLLSACSNQAAPEAQPLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGAKHEITKPWKP*
Ga0066710_1011368413	3300009012	Grasslands Soil	MTLSRRRSVIATAGLIAASWLLSACSNQAAPETRPLGTGGIEPAAIGLETSNQSVTVTNNAGKPIVDVLISIQPVGFAPPFTLAVRRMENAEKRDISLGQFRSNDGTTFSPRFHKARQVTVTATDIVGTKHETTKPWRP
Ga0111539_109435431	3300009094	Populus Rhizosphere	MSLSRRRSVIGTVGLIVASWLLSACSNQAAPEAQPLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKARQVTVTATDIVGKKHEITKPWRP*
Ga0066709_1017309141	3300009137	Grasslands Soil	MTLSRRRSIIATAGLIAASWLLSACSNQAAPETRPLGTGGIEPAAIGLETSNQSVTVTNNAGKPIVDVLISIQPVGFAPPFTLAVRRMENAEKRDISLGQFRSNDGTTFSPRFHKARQVTVTATDIVGTKHEITKPWRP*
Ga0105243_115763571	3300009148	Miscanthus Rhizosphere	MTLSLLRSVPTTAGLLAAGWLFSACANTATSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTRAWAP*
Ga0105243_127800711	3300009148	Miscanthus Rhizosphere	MTLSRRRSVITTVGLIAASWLLSACSNQSAPETRPLGTGGVEPATIALETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRHVKVTATDIVGKKHEITR
Ga0111538_102977782	3300009156	Populus Rhizosphere	MTLSRRRSVLATAGLIASSWLLSACSNQSAPETQPLGTGGVEPAAIALETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLSVRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPWKP*
Ga0126380_113719941	3300010043	Tropical Forest Soil	MNLSRRRSVIAAVASIAASCLFCACSTQVAPEAGSLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQ
Ga0126382_103979031	3300010047	Tropical Forest Soil	MNLSRRRSVIATVASIAASCLFCACSTQVAPEAGSLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPWRP*
Ga0126376_131001172	3300010359	Tropical Forest Soil	ACSTQVAPEAGSLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLAVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGAKHEITKPWKP*
Ga0134124_111057952	3300010397	Terrestrial Soil	AGLIAAGWLFSACANTSTSEAGSLGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPAGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAP*
Ga0134122_101212743	3300010400	Terrestrial Soil	MTLSLLRSVPATAGLIAAGWLFSACANTATSEAGALGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPVGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAR*
Ga0134121_100741312	3300010401	Terrestrial Soil	MTLSLLRSVPATAGLIAAGWLFSACANTATSEAGALGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPAGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAR*
Ga0134121_121705211	3300010401	Terrestrial Soil	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGSQDSEIAVEASNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTTLRRMENAERREISLAQFRSNDGTTFSPRLTKARQLTVT
Ga0134123_106960182	3300010403	Terrestrial Soil	MTLSLLRSVPATAALIAAGWLFSACANTATSEAGSLGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPAGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAP*
Ga0137365_100358292	3300012201	Vadose Zone Soil	MTLSRRRSVIATAGLIAASWLLSACSNQAAPETRPLGTGGIEPAAIGLETSNQSVTVTNNAGKPIVDVLISIQPVGFAPPFTLAVRRMENAEKRDISLGQFRSNDGTTFSPRFHKARQVTVTATDIVGTKHEITKPWRP*
Ga0150985_1038844571	3300012212	Avena Fatua Rhizosphere	AAMTLSLLRSVPATAGLLAAGWLFSACANTSTSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRFTKARQVTVTATDIVGKKHEVTRAWAR*
Ga0150985_1047760881	3300012212	Avena Fatua Rhizosphere	MILSLRRSAAVTAGLVVAVCVLSACSNAVNSESGSLGTSGVEPATLAVETSNQFVTLTNNAGKPIEDVRIAIQPIGSAPAFTSTLRRMENAEKRDISVGQFRSNDGTTFNPRIIRARQITVTATDIIGKKHEITRTWGH*
Ga0137367_101600151	3300012353	Vadose Zone Soil	MTLSRRRSVIATAGLIAASWLLSACSNQAAPETRPLGTGGIIEPAAIGLETSNQSVTVTNNAGKPIVDVLISIQPVGFAPPFTLAVRRMENAEKRDISLGQFRSNDGTTFSPRFHKARQVTVTATDIVGTKHEITKPWKP*
Ga0137369_102500172	3300012355	Vadose Zone Soil	MTLSRRRSVIATAGLIAASWLLSACSNQAAPETRPLGTGGIEPAAIGLETSNQSVTVTNNAGKPIVDVLISIQPVGFAPPFTLAVRRMENAEKRDISLGQFRSNDGTTFSPRLHKARQVTVTATDIVGMKHEITKPWRP*
Ga0150984_1185495571	3300012469	Avena Fatua Rhizosphere	MTLSLLRSVPATAGLLAAGWLFSACANTSTSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRFTKARQVTVTATDIVGKKHEVTRAWAR*
Ga0157331_10099752	3300012486	Soil	MSLSRRRSVIATVGLMAASWLSAACSTASPPETQPLGTAGVEPTAIAVETSNQSVTVTNNAGKPIEDVVIAIKPVGVAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPW
Ga0137373_103163972	3300012532	Vadose Zone Soil	MTLSRRRSVIATAGLIAASWLLSACSNQAAPETRPLGTGGIIEPAAIGLETSNQSVTVTNNAGKPIVDVLISIQPVGFAPPFTLAVRRMENAEKRDISLGQFRSNDGTTFSPRFHKARQVTVTATDIVGTKHEITKPWRP*
Ga0137407_119483832	3300012930	Vadose Zone Soil	LSACSTVATPEAGALGTGGAEPSAIALETSNHSVTVINNAGQPSEDVRIAIQPVGTAPPFTSTLRRMENAEKREISLGQFRSNDGTTFNPRFNKARQVTVTAIDIVGKKHEITRAWAH*
Ga0137410_103213512	3300012944	Vadose Zone Soil	MTLSLLRSVSATAGLIAAGWLLSACSGSSTPEAGALGTSGAEPSAIALETSNQSVIVTNNAGKPIEDVVIAIQPFGTAPPFTTTLRRMENAEKREISLAQFRSKDGTTFSPRLTKARQITVTATDIVGKKHEATSAWAP*
Ga0164303_101089571	3300012957	Soil	MSLSRRRSVIATVVLIAASCVLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTSNAGKPIEDVVIAIKPVGVAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPWKP*
Ga0164302_103222782	3300012961	Soil	MSLSRRRSVIATVVLIAASCLLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTNNAGKPIEDVVIAIKPVGVAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVG
Ga0157379_118906031	3300014968	Switchgrass Rhizosphere	MTLSRRRSVFATIGFIAATWLLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTNNAGKPIEDILIAIKPVGVAPPFTLTVRRMENAEKRDISVGQFRSNDGTTFSPRLYTPRQVTVTATDIVG
Ga0157376_102158553	3300014969	Miscanthus Rhizosphere	MTLSLRRSVTAIATLIAAGWLLSACSSASTQEPGATGTGGTANSAIAVETSNQSVTVTNNAGKPMEDVRIAIQPFGNAPAFTSTLRRLENAEKREISLAQFRSNDGTTFSPRLTRARQVTVTATDIVGQKHELTVPWAR*
Ga0137409_102568512	3300015245	Vadose Zone Soil	MTLSLLRSVSATAGLIAAGWLLSACSGSSTPEAGALGTSGAEPSAIALETSNQSVIVTNNAGKPIEDVVIAIQPFGTAPPFTTTLRRMENAEKREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTMAWAH*
Ga0132256_1005722022	3300015372	Arabidopsis Rhizosphere	MSLSRRRSVIATVVLIAASCLLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTNNAGKPIEDILIAIKPVGVAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPWKP*
Ga0132257_1017368382	3300015373	Arabidopsis Rhizosphere	MSLSRRRSVIATVVLIAASCLLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTNNAGKPIEDILIAIKPVGVAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPWK
Ga0182033_119357821	3300016319	Soil	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGTQDSEIALETSNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTSLRRMENAEKREISLAQFRSNDGTSFSPRLTKARQVSVTATDIVGKKHELTR
Ga0182037_101118212	3300016404	Soil	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGTQDSEIALETSNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTSLRRMENAEKREISLAQFRSNDGMSFSPRLTKARQVSVTATDIVGKKHELTRPWGR
Ga0163161_103968302	3300017792	Switchgrass Rhizosphere	AGLIAAGWLFSACANTATSEAGALGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPAGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAP
Ga0163161_108954061	3300017792	Switchgrass Rhizosphere	SWLLSACSNQSAPETRPLGTGGVEPATIALETSNQSVTVTNNAGKPIEDVVIAIKPVGVAPPFTLTVRRMENSEKRDISVVQFRSNDGTTFSPRLYKPRHVTVTATDIVGKKHEITKPWK
Ga0193693_10615691	3300019996	Soil	MTLSLLRSVPATAGLLAAGWLLSACANTATSEAGALGTSGAEPTVISLQTSNQSVIVTNNAGKPIEDVVIAIQAFGTAPPFTSTLRRMENAETREISLSQFRSRDGTTFSPRLTKARQVTVTATDIVGKKHEVTKAWAP
Ga0193753_101853792	3300020034	Soil	MTLSLPRSVTATAGLIAAGWLLSACSNTSIPEAGVLGTGSAEPSAIALETSNQSVTVINNAGKPIEDVRIAIQPVGTAPPFTSILRRMENAEKREISLSQFRSKDGTTFSPRLTKARQVTVTATDI
Ga0207656_102363832	3300025321	Corn Rhizosphere	MTLSLLRCVPATTGLIAAGWLLSACANTSTSEAGALATSGVEPSAIALQTSNQSVIVTNNAGKPIEDVVIAIQAVGNAPPFTSTLRRMENAEKREISLSQFRSRDGTTFSPRLTKARQVTVTATDIVGKKHELTKAWAH
Ga0207656_102618192	3300025321	Corn Rhizosphere	AAMTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGSQDSEIAVEASNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTSLRRMENAERREISLAQFRSNDGTTFSPRLTKARQLTVTATDIVGKKHELTRAWPR
Ga0207642_103415002	3300025899	Miscanthus Rhizosphere	MTLSLLRSVPATAGLIAAGWLFSACANTATSEAGALGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPAGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAP
Ga0207688_102621241	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTLSRRRSVITTVGLIAASWLLSACSNQSAPETRPLGTGGVEPATIALETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRHVKVTATDIVGKKHEITRPWGS
Ga0207680_106230182	3300025903	Switchgrass Rhizosphere	MTLSLLRSVPATAGLIAAGWLFSACANTATSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTRAWAP
Ga0207695_112691181	3300025913	Corn Rhizosphere	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGSQDSEIAVEASNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTTLRRMENAERREISLTQFRSNDGTTFSPR
Ga0207681_100661763	3300025923	Switchgrass Rhizosphere	MTLSRLRSVITTVGLIAASWLLSACSNQSAPETRPLGTGGVEPATIALETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRHVKVTATDIVGKKHEITRPWGS
Ga0207694_118018081	3300025924	Corn Rhizosphere	MTLSLLRSVPATAGLLAAGWLFSACANTATSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTRAWAP
Ga0207686_108124702	3300025934	Miscanthus Rhizosphere	IAAGWLLSACSNASTQEPGATGTGGSQDSEIAVEASNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTSLRRMENAERREISLAQFRSNDGTTFSPRLTKARQLTVTATDIVGKKHELTRAWPR
Ga0207670_101107132	3300025936	Switchgrass Rhizosphere	MTLSRRRSVFATIGFIAATWLLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTNNAGKPIEDILIAIKPVGVAPPFTLTVRRMENAEKRDISVGQFRSNDGTTFSPRLYTPRQVTVTATDIVGKKHEITKPWKP
Ga0207670_104712992	3300025936	Switchgrass Rhizosphere	MTLSRRRSVITTVGLIAASWLLSACSNQSAPETRPLGTGGVEPATIALETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRHVKVTATDIVGKKHEITRP
Ga0207668_117660931	3300025972	Switchgrass Rhizosphere	MTLSRRRSVITTVGLIAASWLLSACSNQSAPETRPLGTGGVEPATIASETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRHVKVTATDIVGKKHEITRPWGS
Ga0207658_109698111	3300025986	Switchgrass Rhizosphere	MTLSLLRCVPATTGLIAAGWLLSACANTSTSEAGALATSGVEPSAIALQTSNQSVIVTNNAGKPIEDVVIAIQAVGNAPPFTSTLRRMENAEKREISLSQFRSRDGTTFSPRLTKARQVTVTATDIVGKKHEVTTAWAR
Ga0207703_114979302	3300026035	Switchgrass Rhizosphere	MTLSRRRSVITTVGLIAASWLLSACSNQSAPETRPLGTGGVEPAAIALETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISVGQFRSNDGTTFSPRLYTPRQVTVTATDIVGKKHEITKPWKP
Ga0207641_125808711	3300026088	Switchgrass Rhizosphere	MTLSLTRSVTVTAGLIAAGWLLSACTNTSTPEAGALGTSGLEPSVIALETSNQSVTITNNAGKPIEDVRIAIQPVGTVPAFTSTLRRMENAERREISLAQFRSNDGTTFSPRLTKARQVTVTAIDI
Ga0207648_100707761	3300026089	Miscanthus Rhizosphere	TATSEAGALGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPAGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAP
Ga0207648_101739612	3300026089	Miscanthus Rhizosphere	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGSQDSEIAVEASNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTSLRRMENAERREISLAQFRSNDGTTFNPRVLRARQVTASATDIVGKKIELTKPWR
Ga0207428_101743142	3300027907	Populus Rhizosphere	MSLSRRRSVIGTVGLIVASWLLSACSNQAAPEAQPLGTGGVEPAAIAVETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGAKHEITKPWKP
Ga0209583_103203182	3300027910	Watersheds	MTLSLSRSVTATAGLIAAGWLLSACSNTSTPEAGALGTGGAEPSAIALETSNQSVIVTNNAGKPIEDVRIAIQPFGAAPAFTSTLRRMENAEKREISLAQFRSNDGTTFSPRLTKARQVTVTATDIVGKKHEVTKAWTH
Ga0247662_10702122	3300028293	Soil	LLAAGWLLSACANTSTSEAGALGTSGAEPSVIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTAPPFTSTLRRMENAETREISLSQFRSRDGTTFSPRLTKARQVTVTATDIVGKKHEVTRPWAP
Ga0268264_104525981	3300028381	Switchgrass Rhizosphere	LAAGWLLSACANTATSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTTPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTRAWAP
Ga0268264_106434092	3300028381	Switchgrass Rhizosphere	MTLSLLRSVSATAGLIAAGWLFSACANTATSEAGALGTSGAEPSAIAVQTSNQSVIVTNNAGKPIEDVVIAIQPAGTAPPFTSTLRRMENAERREISLAQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTSAWAP
Ga0268264_111054702	3300028381	Switchgrass Rhizosphere	MTLSRRRSVFATIGFIAATWLLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRHVKVTATDIVGKKHEITRPWGS
Ga0307496_100312742	3300031200	Soil	MKLSLSYSLGASLIVTSWLLSACAAASNPEGGALGTSGAEPSAIALETSSQSVTVTNNAGKPIEDVVIAIQAFGTAPPFTSTLRRMENAETREISLSQFRSRDGTTFSPRLTKARQVTVTATDI
Ga0307497_102893461	3300031226	Soil	MTLSLRRSVTAIATLIAAGWLLSACSSASTQEPGATGTGGTANSAIAVETSNQSVTVTNNAGKPMEDVRIAIQPFGNAPAFTATLRRLENAEKREISLAQFRSNDGTTFSPRLTKARQVTVTATDIVGQKHELTVPWAR
Ga0170824_1052151241	3300031231	Forest Soil	MTLSLLRSVPATAGLLAAGWLFSACANTSTSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVVIAIQAFGTAPPFTSTLRRMENAETREISLSQFRSRDGTTFSPRLTKARQVTVTATDIVGKK
Ga0170818_1081247851	3300031474	Forest Soil	MTLSLLRSVPATAGLLAAGWLFSACANTSTSEAGALGTSGAEPSAIALQTSNQSVIVTNNAGKPIEDVLIAIQAVGTAPPFTSTLRRMENAETREISLSQFRSKDGTTFSPRLTKARQVTVTATDIVGKKHEVTVAWAH
Ga0318573_105282522	3300031564	Soil	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGTQDSEIALETSNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTSLRRMENAEKREISLAQFRSNDGTSFSPRLTKARQVSVTATDIVGKKHELTRPWGR
Ga0318561_100122112	3300031679	Soil	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGTQDSEIALETSNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTLLKRMENAEKREISLAQFRSNDGTSFSPRLTKARQVSVTATDIVGKKHELTRPWGR
Ga0307469_116117692	3300031720	Hardwood Forest Soil	LSACSSASTQEPGATGTGGTANSAIAVETSNQSVTVTNNAGKPMEDVRIAIQPFGNAPAFTSTLRRLENAEKREISLAQFRSNDGTTFSPRLTRARQVTVTATDIVGQKHELTVPWAR
Ga0310900_119045891	3300031908	Soil	MTLSRRRSVITTVGLIAASWLLSACSNQSAPETRPLGTGGVEPAAIVLETSNQSVTVTNNAGKPIEDVLIAIQPVGIAPPFTLTLRRMENAEKRDISLGQFRSNDGTTFSPRLYKPRHVKVTATDIVGKKHEITRPWGS
Ga0310912_103045621	3300031941	Soil	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGTQDSEIALETSNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTLLKRMENAEKREISLAQFRSNDGTSFSPRLTKARQVSVTATDIVGKKHEL
Ga0318577_106231071	3300032091	Soil	MTLSLRRSVTATAGLIAAGWLLSACSNASTQEPGATGTGGTQDSEIALETSNQSVVITNNAGKPIEDVRIAIQPFGNAPAFTTLLKRMENAEKREISLAQFRSNDGTSFSPRLT
Ga0307471_1011163161	3300032180	Hardwood Forest Soil	MTLSLRRSVTAIATLIAAGWLLSACSSASTQEPGATGTGGTANSAIAVETSNQSVTVTNNAGKPIEDVRIAIQPYGNAPAFTSTLRRLENAEKREISLAQFRSNDGTTFSPRLTKARQVTVTATDIVGQKHELTVPWAR
Ga0314783_145029_78_497	3300034662	Soil	MTLSRRRSVIATVVLIAASCLLSACSNQSAPETRPLGTGGVEPAAIGLETSNQSVTVTNNAGKPIEDVVIAIKPVGVAPPFTLTVRRMENAEKRDISVVQFRSNDGTTFSPRLYKPRQVTVTATDIVGKKHEITKPWKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092003

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences