NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F092100

Metagenome / Metatranscriptome Family F092100

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092100
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 45 residues
Representative Sequence MPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADS
Number of Associated Samples 93
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 67.29 %
% of genes from short scaffolds (< 2000 bps) 69.16 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (58.879 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(26.168 % of family members)
Environment Ontology (ENVO) Unclassified
(58.879 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(95.327 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 6.52%    β-sheet: 0.00%    Coil/Unstructured: 93.48%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF08299Bac_DnaA_C 40.19
PF11638DnaA_N 16.82
PF00712DNA_pol3_beta 9.35
PF02767DNA_pol3_beta_2 9.35
PF01649Ribosomal_S20p 4.67
PF03109ABC1 3.74
PF02768DNA_pol3_beta_3 3.74
PF13476AAA_23 2.80
PF06831H2TH 1.87
PF02954HTH_8 1.87
PF01751Toprim 0.93
PF02463SMC_N 0.93
PF04127DFP 0.93
PF01475FUR 0.93
PF02518HATPase_c 0.93
PF00899ThiF 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 40.19
COG0592DNA polymerase III sliding clamp (beta) subunit, PCNA homologReplication, recombination and repair [L] 22.43
COG0268Ribosomal protein S20Translation, ribosomal structure and biogenesis [J] 4.67
COG0661Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB familySignal transduction mechanisms [T] 3.74
COG0266Formamidopyrimidine-DNA glycosylaseReplication, recombination and repair [L] 1.87
COG0452Phosphopantothenoylcysteine synthetase/decarboxylase CoaBCCoenzyme transport and metabolism [H] 0.93
COG0735Fe2+ or Zn2+ uptake regulation protein Fur/ZurInorganic ion transport and metabolism [P] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.88 %
UnclassifiedrootN/A41.12 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10026519All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum2902Open in IMG/M
3300000265|LP_A_09_P04_10DRAFT_1047238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium652Open in IMG/M
3300001347|JGI20156J14371_10005212All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum9105Open in IMG/M
3300001347|JGI20156J14371_10143238Not Available679Open in IMG/M
3300001349|JGI20160J14292_10023638All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum3377Open in IMG/M
3300001352|JGI20157J14317_10178168Not Available628Open in IMG/M
3300001355|JGI20158J14315_10194079Not Available584Open in IMG/M
3300003345|JGI26080J50196_1003809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum5660Open in IMG/M
3300003345|JGI26080J50196_1003932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum5543Open in IMG/M
3300003427|JGI26084J50262_1002662All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum9162Open in IMG/M
3300003427|JGI26084J50262_1004893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum6177Open in IMG/M
3300003620|JGI26273J51734_10196195All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum509Open in IMG/M
3300004279|Ga0066605_10021479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum3203Open in IMG/M
3300004279|Ga0066605_10207394Not Available749Open in IMG/M
3300004279|Ga0066605_10236475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium688Open in IMG/M
3300005837|Ga0078893_10354935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum1081Open in IMG/M
3300006026|Ga0075478_10005281All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum4506Open in IMG/M
3300006027|Ga0075462_10011046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum2916Open in IMG/M
3300006402|Ga0075511_1043653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum1599Open in IMG/M
3300006425|Ga0075486_1816555Not Available560Open in IMG/M
3300006637|Ga0075461_10070143Not Available1121Open in IMG/M
3300006874|Ga0075475_10013636All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum4063Open in IMG/M
3300007234|Ga0075460_10041698Not Available1748Open in IMG/M
3300007234|Ga0075460_10129581Not Available890Open in IMG/M
3300007623|Ga0102948_1000029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum51080Open in IMG/M
3300007992|Ga0105748_10218545Not Available795Open in IMG/M
3300009071|Ga0115566_10002779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum14327Open in IMG/M
3300009142|Ga0102885_1042200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1084Open in IMG/M
3300009172|Ga0114995_10169282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum1217Open in IMG/M
3300009193|Ga0115551_1452706Not Available549Open in IMG/M
3300009426|Ga0115547_1076157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum1134Open in IMG/M
3300009437|Ga0115556_1010037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum5198Open in IMG/M
3300009440|Ga0115561_1120968Not Available1053Open in IMG/M
3300009442|Ga0115563_1220462All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum719Open in IMG/M
3300009443|Ga0115557_1211356Not Available756Open in IMG/M
3300009445|Ga0115553_1367659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum549Open in IMG/M
3300009467|Ga0115565_10016457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum4031Open in IMG/M
3300009476|Ga0115555_1193594All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum840Open in IMG/M
3300009495|Ga0115571_1259820Not Available696Open in IMG/M
3300009498|Ga0115568_10161179Not Available1060Open in IMG/M
3300009505|Ga0115564_10351503Not Available728Open in IMG/M
3300009505|Ga0115564_10391787Not Available680Open in IMG/M
3300009505|Ga0115564_10397948Not Available673Open in IMG/M
3300010299|Ga0129342_1316995Not Available534Open in IMG/M
3300012969|Ga0129332_1484910All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1088Open in IMG/M
3300013010|Ga0129327_10562767Not Available625Open in IMG/M
3300017818|Ga0181565_10386731All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum925Open in IMG/M
3300017818|Ga0181565_10885148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum557Open in IMG/M
3300017824|Ga0181552_10129633Not Available1365Open in IMG/M
3300017949|Ga0181584_10062715All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum2599Open in IMG/M
3300017950|Ga0181607_10282289Not Available940Open in IMG/M
3300017950|Ga0181607_10571566All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium597Open in IMG/M
3300017950|Ga0181607_10651239Not Available550Open in IMG/M
3300017952|Ga0181583_10280232Not Available1066Open in IMG/M
3300017957|Ga0181571_10497369All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum746Open in IMG/M
3300017958|Ga0181582_10554794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum708Open in IMG/M
3300017968|Ga0181587_10072324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum2512Open in IMG/M
3300017968|Ga0181587_10175098All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1499Open in IMG/M
3300018036|Ga0181600_10182514All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum1136Open in IMG/M
3300018036|Ga0181600_10538752Not Available550Open in IMG/M
3300018039|Ga0181579_10303170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium893Open in IMG/M
3300018417|Ga0181558_10038531All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum3330Open in IMG/M
3300019283|Ga0182058_1327762Not Available1711Open in IMG/M
3300019751|Ga0194029_1007460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum1510Open in IMG/M
3300019756|Ga0194023_1008857Not Available2016Open in IMG/M
3300019765|Ga0194024_1011452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum1856Open in IMG/M
3300020052|Ga0181554_1057452Not Available2057Open in IMG/M
3300020166|Ga0206128_1068961Not Available1634Open in IMG/M
3300020174|Ga0181603_10160152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium967Open in IMG/M
3300020175|Ga0206124_10006119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum7729Open in IMG/M
3300020404|Ga0211659_10351813Not Available643Open in IMG/M
3300020469|Ga0211577_10005986All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum10448Open in IMG/M
3300021085|Ga0206677_10310138All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum627Open in IMG/M
3300021185|Ga0206682_10362695Not Available619Open in IMG/M
3300021323|Ga0210295_1185260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium705Open in IMG/M
3300021957|Ga0222717_10091113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1915Open in IMG/M
3300021959|Ga0222716_10085535All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum2156Open in IMG/M
3300022900|Ga0255771_1031038All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum3295Open in IMG/M
3300022905|Ga0255756_1001940All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum22763Open in IMG/M
3300022909|Ga0255755_1076975Not Available1526Open in IMG/M
3300022926|Ga0255753_1288976Not Available640Open in IMG/M
3300022928|Ga0255758_10032430All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum3273Open in IMG/M
3300022929|Ga0255752_10036954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum3239Open in IMG/M
3300023172|Ga0255766_10329749Not Available765Open in IMG/M
3300023273|Ga0255763_1347713Not Available508Open in IMG/M
3300023706|Ga0232123_1014319Not Available1710Open in IMG/M
3300024293|Ga0228651_1103726Not Available644Open in IMG/M
(restricted) 3300024324|Ga0233443_1315565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium515Open in IMG/M
3300024335|Ga0228672_1150391Not Available604Open in IMG/M
3300025594|Ga0209094_1110383All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium615Open in IMG/M
3300025610|Ga0208149_1081423Not Available797Open in IMG/M
3300025630|Ga0208004_1145678Not Available516Open in IMG/M
3300025636|Ga0209136_1044988Not Available1524Open in IMG/M
3300025653|Ga0208428_1020382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2190Open in IMG/M
3300025700|Ga0209661_1237500Not Available511Open in IMG/M
3300025701|Ga0209771_1029320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2211Open in IMG/M
3300025704|Ga0209602_1146510Not Available764Open in IMG/M
3300025712|Ga0209305_1194140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum598Open in IMG/M
3300025751|Ga0208150_1026719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.2023Open in IMG/M
3300025860|Ga0209119_1073246All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum1609Open in IMG/M
3300025869|Ga0209308_10006012All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum9157Open in IMG/M
3300025881|Ga0209309_10002035All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum19047Open in IMG/M
3300025881|Ga0209309_10002076All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum18815Open in IMG/M
3300026426|Ga0247570_1043463All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium960Open in IMG/M
3300026460|Ga0247604_1081500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium751Open in IMG/M
3300027612|Ga0209037_1140921Not Available584Open in IMG/M
3300028672|Ga0257128_1019259Not Available1443Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh26.17%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine19.63%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous12.15%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine8.41%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine5.61%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.67%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater3.74%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater2.80%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.87%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.87%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.87%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.87%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.87%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.87%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.93%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.93%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.93%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.93%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.93%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water0.93%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000265Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_10EnvironmentalOpen in IMG/M
3300001347Pelagic Microbial community sample from North Sea - COGITO 998_met_06EnvironmentalOpen in IMG/M
3300001349Pelagic Microbial community sample from North Sea - COGITO 998_met_10EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300003345Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNAEnvironmentalOpen in IMG/M
3300003427Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNAEnvironmentalOpen in IMG/M
3300003620Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNAEnvironmentalOpen in IMG/M
3300004279Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10mEnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006425Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007623Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MGEnvironmentalOpen in IMG/M
3300007992Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2umEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009142Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009442Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300012969Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018039Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019283Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020052Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021323Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R9.63AS (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022900Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaGEnvironmentalOpen in IMG/M
3300022905Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaGEnvironmentalOpen in IMG/M
3300022909Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaGEnvironmentalOpen in IMG/M
3300022926Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaGEnvironmentalOpen in IMG/M
3300022928Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaGEnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300023172Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaGEnvironmentalOpen in IMG/M
3300023273Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaGEnvironmentalOpen in IMG/M
3300023706Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300024324 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_200_MGEnvironmentalOpen in IMG/M
3300024335Seawater microbial communities from Monterey Bay, California, United States - 90DEnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025700Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025701Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025704Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)EnvironmentalOpen in IMG/M
3300025712Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025860Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300026426Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 23R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026460Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 85R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027612Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_125SG_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300028672Metatranscriptome of marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1002651923300000117MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHSAAPDSAMKKADF*
LP_A_09_P04_10DRAFT_104723823300000265MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGP
JGI20156J14371_1000521223300001347Pelagic MarineMPVSYQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES*
JGI20156J14371_1014323823300001347Pelagic MarineTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS*
JGI20160J14292_1002363843300001349Pelagic MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPD
JGI20157J14317_1017816813300001352Pelagic MarineSGQSTLSTKYSMRLTNKHQNIEFLPIRAQHGAAPDSAMKKADS*
JGI20158J14315_1019407913300001355Pelagic MarineSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS*
JGI26080J50196_100380943300003345MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF*
JGI26080J50196_100393213300003345MarineSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS*
JGI26084J50262_100266213300003427MarineVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS*
JGI26084J50262_100489383300003427MarineVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF*
JGI26273J51734_1019619523300003620MarineMPVSGXSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKAES*
Ga0066605_1002147953300004279MarineRIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF*
Ga0066605_1020739413300004279MarineRIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS*
Ga0066605_1023647513300004279MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMK
Ga0078893_1035493523300005837Marine Surface WaterMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAELDSAMKKADF*
Ga0075478_1000528123300006026AqueousMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDLAMKKADF*
Ga0075462_1001104643300006027AqueousMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAEPDSAMKKADF*
Ga0075511_104365323300006402AqueousMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAVKKAES*
Ga0075486_181655523300006425AqueousTINGQFHQLSLLLGQLSYFTMPVSYQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES*
Ga0075461_1007014313300006637AqueousSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF*
Ga0075475_1001363673300006874AqueousTLSTKYSMRLTNKHQNIEFLPIRARHGAKSDSAMKKAES*
Ga0075460_1004169813300007234AqueousGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES*
Ga0075460_1012958113300007234AqueousSTKYSMRLTNKHQNIEFLPIRARHSAAPDSAMKKADF*
Ga0102948_100002913300007623WaterTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF*
Ga0105748_1021854523300007992Estuary WaterMPASGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKVES*
Ga0115566_10002779183300009071Pelagic MarinePVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS*
Ga0102885_104220023300009142EstuarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRAQHGAGPDSALKKADS*
Ga0114995_1016928223300009172MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKLDSAMKKAES*
Ga0115551_145270613300009193Pelagic MarineVPSQSTLSTKYSMRLTNKHQNIEFLPIRARHRAKRDSVMENADS*
Ga0115547_107615723300009426Pelagic MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRAQHGAAPDSAMKKADF*
Ga0115556_101003723300009437Pelagic MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES*
Ga0115561_112096813300009440Pelagic MarineLSLLLGQLSYFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES*
Ga0115563_122046223300009442Pelagic MarineMPVPGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF*
Ga0115557_121135623300009443Pelagic MarineCRIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS*
Ga0115553_136765923300009445Pelagic MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRAQHGAAPDSAMKKADS*
Ga0115565_1001645763300009467Pelagic MarineSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADS*
Ga0115555_119359423300009476Pelagic MarineMVSFISFLFFQGSCHIFTMPVSTQSTLYTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES*
Ga0115571_125982013300009495Pelagic MarineYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKAES*
Ga0115568_1016117923300009498Pelagic MarineTMPVSYQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES*
Ga0115564_1035150313300009505Pelagic MarineIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRAQHGAAPDSAMKKADS*
Ga0115564_1039178723300009505Pelagic MarineQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF*
Ga0115564_1039794823300009505Pelagic MarineQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADS*
Ga0129342_131699523300010299Freshwater To Marine Saline GradientHQLSLLLGQLSYFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKSDSAMKKAES
Ga0129332_148491013300012969AqueousMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHSAAPDSAMKK
Ga0129327_1056276723300013010Freshwater To Marine Saline GradientCRIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF*
Ga0181565_1038673123300017818Salt MarshMPASGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0181565_1088514823300017818Salt MarshMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKAKS
Ga0181552_1012963323300017824Salt MarshSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKAKS
Ga0181584_1006271523300017949Salt MarshMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0181607_1028228923300017950Salt MarshFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0181607_1057156613300017950Salt MarshMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGA
Ga0181607_1065123923300017950Salt MarshPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS
Ga0181583_1028023213300017952Salt MarshSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0181571_1049736923300017957Salt MarshMPASGQSTLSTKYSMKLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0181582_1055479423300017958Salt MarshMPASGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAADSAMKKAKS
Ga0181587_1007232433300017968Salt MarshSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0181587_1017509813300017968Salt MarshMPASGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKA
Ga0181600_1018251423300018036Salt MarshMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRAQHGAGPDSALKKADS
Ga0181600_1053875223300018036Salt MarshTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKAKS
Ga0181579_1030317013300018039Salt MarshMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKA
Ga0181558_1003853163300018417Salt MarshMPVSGQSTLSTKYSMKLTNKHQNIEFLPIRARYGAAPDSAMKKAES
Ga0182058_132776213300019283Salt MarshIVTMPLNGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0194029_100746023300019751FreshwaterMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES
Ga0194023_100885723300019756FreshwaterMPVSYQSTLSTKYSMRLTNKHQNIEFLPIRARHSAAPDSAMKKADF
Ga0194024_101145223300019765FreshwaterMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHSAAPDSAMKKADF
Ga0181554_105745213300020052Salt MarshVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKAKS
Ga0206128_106896113300020166SeawaterGLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0181603_1016015213300020174Salt MarshMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAEPDSA
Ga0206124_1000611923300020175SeawaterMPVSYQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES
Ga0211659_1035181313300020404MarineFFWGGCRIFTMPVSSQPTLSTKYSMRLTNKHQNIEFLPIRDQYGVKPDSALKKAGS
Ga0211577_1000598643300020469MarineMPVSGQSTLYTKYSMRLTNKHQNIEFLPIHARHGVKLDSAMKKAAS
Ga0206677_1031013823300021085SeawaterMPVFGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAELDSAMKKADF
Ga0206682_1036269523300021185SeawaterLLLGQLSYFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAELDSAMKKADF
Ga0210295_118526023300021323EstuarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKAES
Ga0222717_1009111333300021957Estuarine WaterRIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS
Ga0222716_1008553523300021959Estuarine WaterMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSAMKKADF
Ga0255771_103103863300022900Salt MarshLLLGQLSYFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARYGAAPDSAMKKAES
Ga0255756_100194013300022905Salt MarshVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0255755_107697523300022909Salt MarshKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKAKS
Ga0255753_128897623300022926Salt MarshCRIFTMPASGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0255758_1003243013300022928Salt MarshVSGQSTLSTKYSMRLTNKHQNIEFLPIRARYGAAPDSAMKKAES
Ga0255752_1003695413300022929Salt MarshSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKAKS
Ga0255766_1032974913300023172Salt MarshTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0255763_134771323300023273Salt MarshTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDAAMKKADF
Ga0232123_101431923300023706Salt MarshGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0228651_110372623300024293SeawaterMPVSGQSTLPTKYSMRLTNKHQNIEFLPIRARYGAAPDSATKKAES
(restricted) Ga0233443_131556523300024324SeawaterMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKLMLSQ
Ga0228672_115039113300024335SeawaterSCRIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS
Ga0209094_111038313300025594Pelagic MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKA
Ga0208149_108142313300025610AqueousMPASGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDLAMKKADF
Ga0208004_114567823300025630AqueousYQSTLSTKYSMRLTNKHQNIEFLPIRARHGAKPDSSKKKAES
Ga0209136_104498823300025636MarineIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0208428_102038213300025653AqueousVSYQSTLSTKYSMRLTNKHQNIEFLPICARHGAKPDSSTKKAES
Ga0209661_123750023300025700MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS
Ga0209771_102932043300025701MarineGSCRIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS
Ga0209602_114651023300025704Pelagic MarinePVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0209305_119414023300025712Pelagic MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADS
Ga0208150_102671913300025751AqueousYQSTLSTKYSMRLTNKHQNIEFLPICARHGAKPDSSTKKAES
Ga0209119_107324613300025860Pelagic MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSA
Ga0209308_10006012123300025869Pelagic MarineSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS
Ga0209309_1000203583300025881Pelagic MarineMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRAQHGAAPDSAMKKADF
Ga0209309_10002076213300025881Pelagic MarineCRIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAGPDSALKKADS
Ga0247570_104346313300026426SeawaterMPVSGQSTLPTKYSMRLTNKHQNIEFLPIRTRHGAGPD
Ga0247604_108150013300026460SeawaterMPVSGQSTLPTKYSMGLTNKHQNIEYLPIRARHGAEPDSAIKKVDF
Ga0209037_114092123300027612MarineSCRIFTMPVSGQSTLSTKYSMRLTNKHQNIEFLPIRARHGAAPDSAMKKADF
Ga0257128_101925923300028672MarineTKYSMRLTNKHQNIEFLPIHARHGAKPDSAMKKADS

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.