Metagenome Family F092133

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092133
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	118 residues
Representative Sequence	FLFPLADEVRQMIGIVSFARTQRIDLKAPMNYNRFKDTLADRLGDYLKTNGLVRQRPHPFPLHKKWEAARNQTEASLFRALAALADLEIKRKSGGIPVDLGIETFLLSRLRA
Number of Associated Samples	93
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.39 %
% of genes from short scaffolds (< 2000 bps)	87.85 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.327 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (13.084 % of family members)
Environment Ontology (ENVO)	Unclassified (30.841 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.598 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
a.80.1.1: DNA polymerase III clamp loader subunits, C-terminal domain	d1jr3d1	1jr3	0.62113
f.54.1.2: Amino acid antiporter-like	d3giaa_	3gia	0.57376
a.80.1.1: DNA polymerase III clamp loader subunits, C-terminal domain	d1jr3a1	1jr3	0.57251
e.11.1.1: Type II DNA topoisomerase C-terminal domain-like	d1bjta_	1bjt	0.55866
a.185.1.1: Gametocyte protein Pfg27	d1n81a_	1n81	0.5484

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07690	MFS_1	31.78
PF03746	LamB_YcsF	3.74
PF01339	CheB_methylest	1.87
PF13620	CarboxypepD_reg	1.87
PF00962	A_deaminase	1.87
PF00083	Sugar_tr	1.87
PF00072	Response_reg	0.93
PF01425	Amidase	0.93
PF11860	Muramidase	0.93
PF01926	MMR_HSR1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1540	5-oxoprolinase subunit A	Amino acid transport and metabolism [E]	3.74
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	3.74
COG1816	Adenosine/6-amino-6-deoxyfutalosine deaminase	Nucleotide transport and metabolism [F]	1.87
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.41 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	72.90 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	8.41 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.96 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	5.61 %
Unclassified	root	N/A	4.67 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.96 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	5.61 %
Unclassified	root	N/A	4.67 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.96 %
Unclassified	root	N/A	4.67 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	1.87 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.87 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	0.93 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.96 %
Unclassified	root	N/A	4.67 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.87 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	0.93 %
Effusibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Effusibacillus	0.93 %
Brevibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus	0.93 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.96 %
Unclassified	root	N/A	4.67 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.87 %
Brevibacillus thermoruber	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus thermoruber	0.93 %
Effusibacillus pohliae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Effusibacillus → Effusibacillus pohliae	0.93 %
Paenibacillus sonchi group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus sonchi group	0.93 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.96 %
Unclassified	root	N/A	4.67 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.87 %
Paenibacillus sonchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus sonchi group → Paenibacillus sonchi	0.93 %
Brevibacillus thermoruber	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus thermoruber	0.93 %
Effusibacillus pohliae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Effusibacillus → Effusibacillus pohliae	0.93 %
Acidobacteria bacterium ADurb.Bin051	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120936890	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
3300004463\|Ga0063356_101696336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300005093\|Ga0062594_101226094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300005187\|Ga0066675_10355628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300005294\|Ga0065705_10272987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1125	Open in IMG/M
3300005329\|Ga0070683_100949154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300005330\|Ga0070690_100090358	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300005353\|Ga0070669_100514870	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300005434\|Ga0070709_10520949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300005437\|Ga0070710_11139331	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300005440\|Ga0070705_101666574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300005451\|Ga0066681_10588684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	686	Open in IMG/M
3300005518\|Ga0070699_100327572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1377	Open in IMG/M
3300005526\|Ga0073909_10662757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Effusibacillus → Effusibacillus pohliae	520	Open in IMG/M
3300005544\|Ga0070686_100616161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300005546\|Ga0070696_101515034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	574	Open in IMG/M
3300005559\|Ga0066700_10388080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	985	Open in IMG/M
3300005560\|Ga0066670_10891639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005575\|Ga0066702_10052484	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300005615\|Ga0070702_101771064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus thermoruber	515	Open in IMG/M
3300005834\|Ga0068851_10936741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005892\|Ga0075275_1045925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus sonchi group → Paenibacillus sonchi	688	Open in IMG/M
3300006032\|Ga0066696_10147124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1466	Open in IMG/M
3300006032\|Ga0066696_10428313	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300006358\|Ga0068871_101727207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	594	Open in IMG/M
3300006797\|Ga0066659_10753093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300006797\|Ga0066659_11238240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300006797\|Ga0066659_11770653	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006800\|Ga0066660_10162313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1668	Open in IMG/M
3300006800\|Ga0066660_10652776	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300006854\|Ga0075425_101544997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300006871\|Ga0075434_101898551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	602	Open in IMG/M
3300006880\|Ga0075429_100608335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300006880\|Ga0075429_101746445	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300006880\|Ga0075429_101946122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300006914\|Ga0075436_101379925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	534	Open in IMG/M
3300007004\|Ga0079218_13293014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300009089\|Ga0099828_10728357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300009090\|Ga0099827_10087829	All Organisms → cellular organisms → Bacteria	2445	Open in IMG/M
3300009098\|Ga0105245_11200202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300009147\|Ga0114129_11932015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300009177\|Ga0105248_13264713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300009660\|Ga0105854_1126616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300010304\|Ga0134088_10208382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300010400\|Ga0134122_13065418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300010403\|Ga0134123_10906905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300010403\|Ga0134123_11029832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300011271\|Ga0137393_10258205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1480	Open in IMG/M
3300011427\|Ga0137448_1055685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300012096\|Ga0137389_10954897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300012189\|Ga0137388_11815771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012200\|Ga0137382_10851950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300012200\|Ga0137382_11161471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300012209\|Ga0137379_11737550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012211\|Ga0137377_11012062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300012285\|Ga0137370_10899690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300012350\|Ga0137372_10543225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300012359\|Ga0137385_11312558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300014052\|Ga0120109_1029231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300015245\|Ga0137409_11475323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300015372\|Ga0132256_101195801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300015374\|Ga0132255_100322513	All Organisms → cellular organisms → Bacteria	2229	Open in IMG/M
3300018084\|Ga0184629_10329115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300018466\|Ga0190268_12157776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300018466\|Ga0190268_12297807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300018468\|Ga0066662_11356596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300018468\|Ga0066662_12053186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300018468\|Ga0066662_12957531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300018482\|Ga0066669_11611550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300018482\|Ga0066669_11669559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300018482\|Ga0066669_11681080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300018482\|Ga0066669_11913436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300019767\|Ga0190267_10036465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1588	Open in IMG/M
3300019877\|Ga0193722_1039992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1203	Open in IMG/M
3300020181\|Ga0196958_10009795	All Organisms → cellular organisms → Bacteria	2648	Open in IMG/M
3300021289\|Ga0213903_102747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300021418\|Ga0193695_1130723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300021953\|Ga0213880_10081234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300023046\|Ga0233356_1002472	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300023168\|Ga0247748_1059656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300023268\|Ga0247765_1061040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300024283\|Ga0247670_1026726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300024288\|Ga0179589_10630991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300024323\|Ga0247666_1102146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300024331\|Ga0247668_1007439	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300025922\|Ga0207646_10515496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300025925\|Ga0207650_11580121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300025934\|Ga0207686_10486864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300025936\|Ga0207670_11786668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300025944\|Ga0207661_10853372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300026041\|Ga0207639_12297356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300026089\|Ga0207648_10364248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium ADurb.Bin051	1305	Open in IMG/M
3300026118\|Ga0207675_101866298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300026537\|Ga0209157_1064900	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300026552\|Ga0209577_10820922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300027459\|Ga0207505_105640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300028072\|Ga0247675_1003538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2059	Open in IMG/M
3300028146\|Ga0247682_1012408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1473	Open in IMG/M
3300031164\|Ga0307502_10024715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300031740\|Ga0307468_101800343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300032955\|Ga0335076_10320747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1437	Open in IMG/M
3300034236\|Ga0334938_124511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.44%
Host-Associated	Host-Associated	20.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.57%
Plants	Host-Associated → Plants	20.56%
Aquatic	Environmental → Aquatic	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.61%
Sediment	Environmental → Aquatic → Sediment	1.87%
Roots	Host-Associated → Plants → Roots	1.87%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.93%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.94%
Loam	Environmental → Terrestrial → Soil → Loam	12.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.87%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.93%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.93%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.93%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300021289	Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_3	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300023046	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027459	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-A (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300034236	Biocrust microbial communities from Mojave Desert, California, United States - 34SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1209368901	3300002568	Soil	MIGIVSFAKSQNIDLSRSMQYNRFKDTIADRLGDYLKNHGLVRQRPHPFPLHKKWEAARNANEATLFRALAEIADLEVKRKSGGLPVDLGLETFLLARMRG*
Ga0063356_1016963362	3300004463	Arabidopsis Thaliana Rhizosphere	KLRDLVAQARREDPKGSVEIHYGRYLFAIPEEIRQMIGIHSWARMHNVNLRQSIQYNRFKDTVADRLGDYLKAHGLVRQRPHPFPLHKKFEAARSYTEVELFRALRAVTDLEIQRKSGGMPIDLGIETFLLQQIRR*
Ga0062594_1012260942	3300005093	Soil	HYGKFLFPLADELRQMIGIVSYARTNRLDLRASMPYNRFKDTVADRLGDYLKANGIVRQKPHPFPLHKKWEAARAHTEVSLFAALAAIAELEIKRKSGGIPVDIGMEAFLLSRAR*
Ga0066675_103556281	3300005187	Soil	AQARREDAKAPVEIHYGKFLFPLADELRQMIGVVSFARTNRIDLRAPMNYNRFKDTVADRLGEYLKASGIVRQKPHPFPLHKKWEAARGQSEGELFALLAAIADLEIKRKSGGIPVDVGMETFLLSRAR*
Ga0065705_102729873	3300005294	Switchgrass Rhizosphere	PLAEELRQMIGIHSWARVHDMNLRQSMQYNRFKDTIADRLGDYLKAHGLVRQRPHPFPLHKKWEAARNSTEADLFRALAFVADLEIKRKSGGLPVDVGIETFLLSRLRA*
Ga0070683_1009491543	3300005329	Corn Rhizosphere	FLFPLADEVRQMIGIVAYARMNNLDLRRSIQYNRFKDTVADRLGDYLKANGLVRQRPHPFPLHKKWEAASRYSEADLFRTLAQLAELEVKRKSGGVPVDVGLETFLLARAR*
Ga0070690_1000903583	3300005330	Switchgrass Rhizosphere	FLFPLADEIRQMIAIRSYARARNVDLRASMNYNRFKDTVADSLGDYMKELGLVRQRPHPFPLHKKWEAARSHSDADLFRALATIADLDVKRKSGGVPVEVGLETFLLSQLK*
Ga0070669_1005148702	3300005353	Switchgrass Rhizosphere	LDMQYGKFLFPLADEVRQMIGIVSFARTQRIDLRAPMNYNRFKDTVADRLGEYLKANGIVRQKPHPFPLHKKWEAARGQSEASLFAALSELADLDIKRKSGGVPADVGLETFLLSRLRS*
Ga0070709_105209492	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DARTPIDIQYGKFLFPLADEVRQMIGIVSFAKTQRIDLRAPMNYNRFKDTVADRLGDYLKQNGIVRQKPHPFPLHKKWEAARNQSEASLFAALSELADIDIKRKSGGVPADVALETFLLSRLR*
Ga0070710_111393311	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	FLFPLADELRQLIAIHSYARTNNLDLRQSIPYNRFKDTVADRLGDYLKSNGIVRQKPHPFPLHKKWEAARHQNERTLFAALATIADMEIKRKSGGVAVDVGMELFLLGRRR*
Ga0070705_1016665741	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RREDAKAPIEIHYGKFLFPLADELRQMIGVVSYARTNRIDLRASMPYNRFKDTVADRLGEYLKANGIVRQKPHPFPLHKKWEAARAHSEADLFAALAAIAELEIKRKSGGIPVDVGMEAFLLSKL*
Ga0066681_105886842	3300005451	Soil	ARREDSRAPADILYGRYLFPIADELRQMIGIISFARTNKIDLQKPIQYNRFKDTLADRLGEYLKANGIVRQKPHPFPLHKKWEAAREQNEESLFRALAEIADLEVKRKSGGVPVDLGLEMFLLMHN*
Ga0070699_1003275721	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VAQSRREDAKASLDILYGRYLFPIADEIRQTIGIMSFARVNRIDLQKPIQYNRFKDTLADKLGDYLKTFGLARQRPHPFPLHKKWEAARTMSEADLFRALAEIADLEIKRKSGGMPVDVGLETFLLQRVRGSIRE*
Ga0073909_106627571	3300005526	Surface Soil	PLADEVRQMIGIVSYARMNNIDLRRPMQYNRFKDTLADRLGDYLKANGLVRQRPHPFPLHKKWEAAGRHGEAELFRALAQLADFEVKRKSGGLPVDVALETFLLSRAR*
Ga0070686_1006161611	3300005544	Switchgrass Rhizosphere	PLADEIRQMIAIRSYARARNVDLRASMNYNRFKDTVADSLGDYMKELGLVRQRPHPFPLHKKWEAARSHSDADLFRALATIADLDVKRKSGGVPVEVGLETFLLSQLK*
Ga0070696_1015150342	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VEAVAKLRDLVAQSRRDDPRTPLDIQYGKYLFPLADEVRQMIGIVSFAKTQRIDLRTPMNYNRFKDTVADRLGDYLKAHGIVRQKPHPFPLHKKWEAARGQSEASLFAALSDLADLDIKRKSGGVPADVGLETFLLQRLR*
Ga0066700_103880801	3300005559	Soil	KFLFPLADEVRQMIGIVSFARTQRIDLRAPMSYNRFKDTLADRLGDYLKMNGIVRQKPHPFPLHKKWEAARNQSEASLFAALSELADLDIKRKSGGVPADVGLETFLLSRLR*
Ga0066670_108916392	3300005560	Soil	AKLRDLVAQARREDAKAPVEIHYGKFLFPLADELRQMIGVVSFARTNRIDLRAPMNYNRFKDTVADRLGDYLKQNGIVRQKPHPFPLHKKWEAARHQSEASLFAALSELADLDIKRKSGGVPADVGLETFLLSRLRS*
Ga0066702_100524841	3300005575	Soil	RQMIGIVSFARTNRIDLKAPMNYNRFKDTLADRLGDSLKVNGLVRQRPHPFPLHKKWEAARNQTEASLFRALAALADLEIKRKSGGIPVDLGIETFLLSRLRA*
Ga0070702_1017710641	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	IHYGRYLFAIPDELRQMIGIHSWARANNANLKASMQYNRFKDTIADKLGDYLKAHGLVRQRPHPFPLHKKWEAARAYSEAALFRALAEIADLEIKRKSGGLPVETGLETFLLSRARS*
Ga0068851_109367412	3300005834	Corn Rhizosphere	LFPLADELRQLIAIHSYARTNNIDLRQPVQYNRFKDTIAERLGESMKQAGIVRQRPHPFPLHKKWEAARAVREEQLWRALADVADLEVKRKSGGVPIDVGMETLLLSVRAR*
Ga0075275_10459251	3300005892	Rice Paddy Soil	YGRFIFPLADEVRQLIAIHSYARASKIDLRASMPYNRFKETLAERLGESMKNAGIVRQRPHPFPLHKKWEAARSQKEPDLWRSLAFLAELDVKRKSGGVPVEIGLDMFLLNARR*
Ga0066696_101471242	3300006032	Soil	IDIQYGKFLFPLADELRQLIAIHSFARAANLNLRQSIQYNRFKDTIAEKLGDYMKNAGIVRQRPHPFPLHKKWSAAGTQREGDLWSALAFVADLEVKRKSGGIPVDVGMETFLLSRLRA*
Ga0066696_104283131	3300006032	Soil	QMIGIVSFARTNRIDLKAPMNYNRFKDTLADRLGDSLKANGLVRQRPHPFPLHKKWEAARNQTEASLFRALAALADLEIKRKSGGIPVDLGIETFLLSRLRA*
Ga0068871_1017272071	3300006358	Miscanthus Rhizosphere	DPKAPIEIQYGKFLFPLADEIRQMIGIVSFARTQRIDLKAPMNYNRFKDTLADRLGESLKANGLVRQKPHPFPLHKKWEAARNQTEASLFRALAALADLEIKRKSGGIPADLGIETFLLQRLRA*
Ga0066659_107530931	3300006797	Soil	DIHYGRFLFPLADELRQLIAIHSYARINDLDLRQPIQYNRFKDTIAERLGDAMKNRGIVRQRPHPFPLHKKWQAARTRREEQLWRALATGADLDVKRKSGGVPIDVGMEAFLLSWPTRGVPKSVN*
Ga0066659_112382401	3300006797	Soil	IHYGKFLFPLADELRQMIGVVSYARTNRIDLRASMPYNRFKDTVADRLGEYLKANGIVRQKPHPFPLHKKWEAARAHGEAELFAALAAVADLEIKRKSGGVPVDVGLETLLLSRRAV*
Ga0066659_117706532	3300006797	Soil	DAKAPLEVHYGKFLFPLADELRQMIGIVSFARTNRRDLRASMRYNRFKDTVADRLGEYLKANGIVRQKPHPFPLHKKWEAARSHTEGELFAALAAVADLEIKRKSGGVPVDVGMETFLLLRSR*
Ga0066660_101623132	3300006800	Soil	FPLADELRQMIGVVSFARTNRIDLRAPMNYNRFKDTVADRLGEYLKTNGIVRQKPHPFPLHKKWEAARGQSEAGLFALLAAIADLEIKRKSGGVPVDIGMETFLLTRHPER*
Ga0066660_106527761	3300006800	Soil	IQYGKFLFPLADEIRQMIGIVSFARTNHIDLKAPMNYNRFKDTLADRLGDSLKANGLVRQRPHPFPLHKKWEAARNQTEASLFRALAALADLEIKRKSGGIPVDLGIETFLLSRLRA*
Ga0075425_1015449972	3300006854	Populus Rhizosphere	AQSRREDSKAPADILYGRYLFPIADELRQTIGIISFARANRIDLQKPIPYNRFKDTMADRLGEYLKANGIVRQKPHPFPLHKKWEAAREHSEAELFSALAEIADLEIKRKSGGVPVDFGLEMFLLERR*
Ga0075434_1018985512	3300006871	Populus Rhizosphere	PLADELRQMIGVVSYARTNRIDLRAPMNYNRFKDTVADRLGEYLKANGIVRQKPHPFPLHKKWEAARAHSEADLFAALAAVADLEIKRKSGGIPVDVGMESFLLSKL*
Ga0075429_1006083351	3300006880	Populus Rhizosphere	QARREDPKSSAEIHYGRYLFAIPEELRQMIGIHSWARAQNVNLKQSMQYNRFKDTIADKLGDYLKAHGIVRQRPHPFPLHKKWEAARAYGEADLFRALAEMADLEVKRKSGGLPIDIGMETFLLSRLR*
Ga0075429_1017464452	3300006880	Populus Rhizosphere	ADEIRQMIGIHSFARTHNLNLKTSMQYNRFKDSIADKLGDYLKTFGLVRQRPHPFPLHKKWEAARSLSEADLFRALADIADLEIKRKSGVMPVDIGLETFLLQRVRA*
Ga0075429_1019461221	3300006880	Populus Rhizosphere	YLFAIPEELRQMIGIHSWARAQNVNLRASMNYNRFKDTIADKLGDYLKAHGLVRQRPHPFPLHKKFEAARGYSEAELFRALAEVADLEIKRKSGGLPVEVGLETFLLSRIRS*
Ga0075436_1013799251	3300006914	Populus Rhizosphere	IAKLRDLVAQARREDAKAPVEIHYGKFLFPLADELRQMIGVVAFARTNRIDLRAPMSYNRFKDTVADRLGEYLKANGIVRQKPHPFPLHKKWEAARGQSEGELFALLAAIADLEIKRKSGGIPVDVGMETFLLSRAR*
Ga0079218_132930141	3300007004	Agricultural Soil	ELVAQARREDPKSSVEIHYGRYLFPLADEIRQMIGIHSWARMQNVNLKASMNYNRFKDTIADKLGDYLKTYGLVRQRPHPFPLHKKWEAARTYSEADLFRALNEVADLEIKRKSGGLPVDVGIETFLLSRVRAM*
Ga0099828_107283572	3300009089	Vadose Zone Soil	EDARASADILYGRYLFPIADELRQTIGIISFARANKIDLQKPMQYNRFKDTLADRVGEYLKDHGIVRQKPHPFPLHKKWEAARGQSEEELFRALAAIADLDIKRKSGGVPVDVGLEMFLLSRR*
Ga0099827_100878293	3300009090	Vadose Zone Soil	LRDLVAQARREDARASLDILYGRYLFPIADELRQTIGIISFARANTIDLQKTIHYNRFKDTIADRLGDYLKANGIVRQRPHPFPLHKKWEAARGQSEEELFRALAAIADLEVKRKSGGVPVDIGLEMFLLSHMRS*
Ga0105245_112002021	3300009098	Miscanthus Rhizosphere	DSKSPADIHYGRFLFPLADELRQLIAIHSYAKMNNVDLRQSIPYNRFKDTIAERLGDFMKSAGVVRQRPHPFPLHKKWEAARTLREEQLWRSLASVADLEVKRKSGGVPIDVGMEAFLLSKLAR*
Ga0066709_1009462331	3300009137	Grasslands Soil	VSFARAQRLDLRKSIPYNRFKDTVADKLGEYLKGHALVRQKPHPFPLHKKWEAAGKETEENLFRALATLADLEVKRKSGGVPVDLGLEMFLLSRVKQ*
Ga0114129_119320151	3300009147	Populus Rhizosphere	PKTSIEFHYGRFLFPLADEIRQMIGIHSFARTHNLNLKTSMQYNRFKDSIADKLGDYLKTFGLVRQRPHPFPLHKKWEAARSLSEADLFRALADIADLEIKRKSGGMPVDVGLETFLLQRVRG*
Ga0105248_132647131	3300009177	Switchgrass Rhizosphere	EIRQMIGIVSFARTQRIDLKAPMNYNRFKDTLADRLGDSLKANGLVRQKPHPFPLHKKWEAARNQTEASLFRALAALADLEIKRKSGGIPADLGIETFLLARWRAQ*
Ga0105854_11266162	3300009660	Permafrost Soil	QMRREDPKTTVEIHYGKFIFNLADEVRQMIGIISFARTAGIDLKRGMQYNRFKDSLADRLGDALKANGIVRQRPHPFPLFKRFEAARSHTEAKLFEALAELAQIDIDRKSGGLPADLAIEAFLLRRVVP*
Ga0126310_114687242	3300010044	Serpentine Soil	ARVHGLDLRQSMPYNRFKDTLAERVGDYLKSHGLVRQRPHPFPLHKKWEAARGHREEDLFRALAAVADLEVKRKSGGLPVDVGLETFLLSRLRGPARPAT*
Ga0134088_102083822	3300010304	Grasslands Soil	DELRQTIGIISFARANKIDLQKTMQYNRFKDTLADRLGDYLKANGIVRQKPHPFPLHKRWEAARGQSEEELFRALAAIADLDVKRKSGGVPVDLGLEMFLLSRR*
Ga0134122_130654181	3300010400	Terrestrial Soil	FPLADELRQMIGIVSFARSQNLDLSRSIQYNRFKDTVADRLGEYLKANGIVRQKPHPFPLHKKWEAARGHGEAELFAALAAVADLEIKRKSGGIPVDVGMEAFLLSRAR*
Ga0134123_109069052	3300010403	Terrestrial Soil	AEELRQMIGIHSWARVHDMNLRQSMQYNRFKDTIADRLGDYLKAHGLVRQRPHPFPLHKKWEAAKNSSERDLFAALAFVADLEIKRKSGGLPVDVGIETFLLSRLRS*
Ga0134123_110298321	3300010403	Terrestrial Soil	MPLDMQYGRFLFPLADEIRQMIGIHSFARANNVNLKASMQYNRFKDSLADRVGDYLKSYGLVRQRPHPFPLHKKWEAARSFSEADLFRALADIADLDIKRKSGGLSTDVALETFLLQRLRA*
Ga0137393_102582051	3300011271	Vadose Zone Soil	IEAFSKRRDLVAQSRREDSRAPADVLYGRYLFPIADELRQMIGIISFARANKIDLQKPMQYNRFKDTLADRLGEYLKLHGVVRQRPHPFPLHKKWEAASEQSEPELFRALAEIADLDVKRKSGGVPVDLGLEMFLLSRR*
Ga0137448_10556851	3300011427	Soil	FAIPEELRQMIGIHSWARANNANLKASMQYNRFKDTIADKLGDYLKAHGLVRQRPHPFPLHKKWEAARAYSETDLFRALAEVADLEIKRKSGGLPVDVGMETFLLSRLRTSS*
Ga0137389_109548971	3300012096	Vadose Zone Soil	AVSKLRDLVAQARREDARASADILYGRYLFPIADELRQTIGIISFARANKIDLQKPMQYNRFKDTLADRVGEYLKDHGIVRQKPHPFPLHKKWEAARSQSEEELFRALAAIADLDIKRKSGGVPVDVGLEMFLLSRR*
Ga0137388_118157711	3300012189	Vadose Zone Soil	KLRDLVAQSRREDAKAPADILYGRYLFPIADEIRQMIGIISFARANKIDLQKPMQYNRFKDTLADRLGEYLKAHGIVRQRPHPFPLHKKWEAASEQSEPELFRALAEIADLDVKRKSGGVPVDLGLEMFLLSRR*
Ga0137382_108519501	3300012200	Vadose Zone Soil	MIGIVSFARTQRIDLKAPMNYNRFKDTLADRLGESLKANGLVRQKPHPFPLHKKWEAARNQSEVSLFAALSELADLDIKRKSGGVPADVGLETFLLSRLR*
Ga0137382_111614712	3300012200	Vadose Zone Soil	IRQMIAIHSFARAASLNLRQSMQYNRFKDTIAEKLGDYMKNAGIVRQRPHPFPLHKKWSAAGAQREEDLWSALAFVAELDIKRKSGGVPVDVGIEMFLLSRARVQ*
Ga0137379_117375501	3300012209	Vadose Zone Soil	VAQARRDDPRTPIDMQYGKFLFPLADEVRQMIGIVSFARTQRIDLRAPMNYNRFKDTLADRLGDYLKMNGIVRQKPHPFPLHKKWEAARKQSEASLFAALSELADLDIKRKSGGVPADVGLEVFLLSRR*
Ga0137377_110120622	3300012211	Vadose Zone Soil	LVAQSRREDARAPADILYGRYLFPIADELRQMIGIISFARANKIDLHKPMQYNRFKDTLADRLGEYLKSHGIVRQRPHPFPLHKKWEAANDQNEAELFSALAEIADLEVKRKSGGIPVDLGLEMFLLSRR*
Ga0137370_108996901	3300012285	Vadose Zone Soil	ARRDDPRTPIDIQYGKFLFPLADEVRQMIGIVSFARTQRIDLRAPMSYNRFKDTLADRLGDYLKMNGIVRQKPHPFPLHKKWEAARNQSEASLFAALSELADLDIKRKSGGVPADVGLETFLLSRLR*
Ga0137372_105432252	3300012350	Vadose Zone Soil	QTDFLYGRYLFPIADELRQMIGIISFARANKIDLQKPMQYNRFKDTLADRLGEYLKSHGIVRQRPHPFPLHKKWEAAREQNEADLFRALAEIADLEVKRKSGGIPVDLGLEMFLLARR*
Ga0137385_113125582	3300012359	Vadose Zone Soil	RAPADILYGRYLFPIADELRQMIGIISFARANKIDLNKPMQYNRFKDTLAERLGEYLKSHGIVRQRPHPFPLHKKWEAARNQSEAELFRALAEIADLEVKRKSGGVPVDLGLEMFLLARR
Ga0157369_115816392	3300013105	Corn Rhizosphere	LIAIHSFARAANLNLRQSIQYNRFKDTIAEKLGDYMKNAGIVRQRPHPFPLHKKWSAAGAQREEDLWRALALVADLEVKRKSGGLPVDVGMETFLLSRLRA*
Ga0120109_10292312	3300014052	Permafrost	SDILYGRFLFPLADEIRQMIAIRSYARTKNIDLKASMTYNRFKDTVADALGDYMKNLGLVRQRPHPFPLHKKWEAARSQTEGDLFRALAAIADLDVKRKSGGVPVELGLETFLLSQLK*
Ga0163163_108247052	3300014325	Switchgrass Rhizosphere	GIHSFVRANNINLRASMQYNRFKDTLADRVGDYLKAHGLVRQRPHAFPLLKKWEAARNYSEADLFRALSEVAEMEIKRKSGGLPTDVALESFLLQRTRA*
Ga0137409_114753232	3300015245	Vadose Zone Soil	IVSFARTQRIDLKAPMNYNRFKDTLADRLGDSLKANGLVRQKPHPFPLHKKWEAARNQTEANLFRALAALADLEIKRKSGGIPTDLGIETFLLQRLRATT*
Ga0132256_1011958011	3300015372	Arabidopsis Rhizosphere	LRELVAQGRREDPKTAIEYQYGKFLFPLADELRQMIAIRSYARINKINVRQSMQYNRFKDTVADRLGDYLKNAGLVRQRPHPFPLHKKWESARTRTDEDLFRALADLADLDVKRKSGGVSMDIALETFILAQRS*
Ga0132255_1003225133	3300015374	Arabidopsis Rhizosphere	ELVAQGRREDPKTAIEYQYGKFLFPLADELRQMIAIRSYARINKINVQQSMQYNRFKDTVADRLGDYLKNAGLVRQRPHPFPLHKKWESARTRTDEDLFRALADLADLDVKRKSGGVSMDVALETFILAQRS*
Ga0184629_103291152	3300018084	Groundwater Sediment	ADEIRQMIAIRSYARAKNIDLRAPMNYNRFKDTTDDALGDYMKDLGLVRQRPHPFPLLKKWEAARSHSDVDLFRALATIADLDVKRKSGGVPLDIALETFLLNRLRQQIADRRSQD
Ga0190268_121577762	3300018466	Soil	FAIPEELRQMIGIHSWARANNVNLRASVNYNRFKDTIADKLGDYLKQHSLVRQRPHPFPLHKKFEAARVYSEADLFRALAAIADMEIKRKSGGLPVDVGLETFLLSKARR
Ga0190268_122978071	3300018466	Soil	FAIPDELRQMIGIHSWARAYNVNLRASVNYNRFKDTIADKLGDYLKQMGLVRQRPHPFPLHKKFEAARVYSETDLFRALAEVADLEIKRKSGGLPIDVGLETFLLSRLR
Ga0066662_113565962	3300018468	Grasslands Soil	VAQARRDEPRSTTDVLYGRYLFPLADELRQMIGVISFARAQRLDLQKEISYNRFEDTLADRLGEYLKGLGLVRQKPHPFPLHKKWEAAGRENEEALFRALATLADLEVKRKSGGVPVDLGLEMFLLSRVRS
Ga0066662_120531862	3300018468	Grasslands Soil	DELRQMIGVVSFARTNRIDLRAPMNYNRFKDTVADRLGEYLKASGIVRQKPHPFPLHKKWEAARGQSEGELFALLAAIADLEIKRKSGGIPVDVGMETFLLSRAR
Ga0066662_129575311	3300018468	Grasslands Soil	IEIQYGKFLFPLADEVRQMIGIVSFARTNRIDLKAPMNYNRFKDTLADRLGDSLKANGLVRQRPHPFPLHKKWEAARNQTEASLFRALAALADLEVKRKSGGIPSDLGIETFLLGRLRG
Ga0066669_116115501	3300018482	Grasslands Soil	EDPRASIDIQYGKFLFPLADEIRQLIAIHSFARTANLNLRQSIQYNRFKDTVAEKLGDYMKNAGIVRQRPHPFPLHKKWSAAGAQREEDLWSALALVADLEVKRKSGGVPVDVGMETFLLSRKIYP
Ga0066669_116695591	3300018482	Grasslands Soil	EDARASVDVLYGRYLFPLADELRQMIAIVSFARAQRLDLRKSIPYNRFKDTVADKLGEYLKGHALVRQKPHPFPLHKKWEAAGKETEENLFRALATLADLEVKRKSGGVPVDLGLEMFLLSRVTQ
Ga0066669_116810801	3300018482	Grasslands Soil	QARREDPKGSIEIHYGRYLFPLAEELRQMIAIHSYARLHNVDLRASINYNRFKDTVAERLGEYMKNAGVVRQRPHPFPLHKKWEAARSTREEDLWRALATVGDLEVKRKSGGVPIDVGMEAFLLSRLHS
Ga0066669_119134361	3300018482	Grasslands Soil	ELRQMIGIVSYARTHRIDLRTPIPYNRFKDTVAERLGEYLKENGIVRQKPHPFPLHKKWEAARTQGEAELFAALAAIADLEIKRKSGGIPVDVGMETFLLSRSQGSRRA
Ga0190267_100364652	3300019767	Soil	DEVRQMIGIHSWAKVNNVNLKQSMNYNRFKDTIADRLGDYMKAHALVRQRPHPFPLLKKWEAARTYSEADLFRALSSLADLEIKRKSGGLPSDLAVETFLLQRLRG
Ga0193722_10399922	3300019877	Soil	QMIGVVSFARTNRIDLRAPMNYNRFKDTLADRLGDSLKANGLVRQKPHPFPLHKKWEAARNQTEAGLFRALAALADLEIKRKSGGIPADLGIETFLLQRLR
Ga0196958_100097951	3300020181	Soil	PLDMHYGRFIFPLADEVRQMIGIHSWARAHNVNLRQSMPYNRFKDTIADRLGDYLKQFGLVRQRPHPFPLHKKWEAARSTSEADLFAALAALADLEIKRKSGGLPVDVGLETFLLQRVRA
Ga0213903_1027471	3300021289	Soil	KMPVDMHYGRFLFPLAEEIRQMIGIHSWARVHDMNLRQSMQYNRFKDTIADRLGDYLKNHGLVRQRPHPFPLHKKWEAARNSTEADLFRALAFVADLEIKRKSGGLPVDIGIETFMLSRLRA
Ga0193695_11307232	3300021418	Soil	VRQMIGIVSFARTQRIDLKAPMNYNRFKDTLADRLGESLKANGLVRQKPHPFPLHKKWEAARNQTEASLFRALAALADLEIKRKSGGIPADLGIETFLLARMRA
Ga0213880_100812342	3300021953	Exposed Rock	FLFPLADEVRQMIGIVSFARTQRIDLKAPMNYNRFKDTLADRLGDYLKTNGLVRQRPHPFPLHKKWEAARNQTEASLFRALAALADLEIKRKSGGIPVDLGIETFLLSRLRA
Ga0233356_10024721	3300023046	Soil	MIGIVSYARMHNIDLRASMNYNRFKDTVADRLGDYLKANGLVRQRPHPFPLHKKWEACRGHNEAELFRALAAIADLEIKRKSGGIAADVGLETFLLSRLRRA
Ga0247748_10596562	3300023168	Soil	KMPVDMHYGRFLFPLADEVRQMIGIHSWARVNNVNLKQRVDYNRFKDTIADRLGDYMKAHALVRQRPHPFPLLKKWEAARNYSEADLFRALKTLADVEIQRKSGGLPADLAIETFLLQRLRA
Ga0247765_10610401	3300023268	Plant Litter	RFLFPLADELRQMIGIVSYARMNNIDLRASMNYNRFKDTVADRLGDYLKANGLVRQRPHPFPLHKKWEACRGRNEAELFRGLSAIAELEIKRKSGGIACDVGLETFLLSRLRRS
Ga0247670_10267261	3300024283	Soil	KAPLDIQYGKFLFPLADEVRQMIGIVSFARTQRIDLKATMNYNRFKDTLADRLGESLKANGLVRQKPHPFPLHKKWEAARNQSEASLFRALAALADLEIKRKSGGIPADLGIETFLLQRLRG
Ga0179589_106309912	3300024288	Vadose Zone Soil	RREDAKAPIEIQYGKFLFPLADELRQMIGIVSFARSQKLDLSRSIQYNRFKDTIADRLGDYLKNNGLVRQRPHPFPLHKKWEAARGANEAQLFRALAEIADLEIKRKSGGLPVDVGLETFLLSRMRS
Ga0247666_11021461	3300024323	Soil	VRQMIGIVSFARTQRIDLKAPMNYNRFKDTLADRLGESLKANGLVRQKPHPFPLHKKWEAARNQSEASLFRALAALADLEIKRKSGGIPADLGIETFLLQRLRG
Ga0247668_10074393	3300024331	Soil	DPKAPLDIQYGKFLFPLADEVRQMIGVVSFARTNRIDLRVPMNYNRFKDTLADRLGDSLKANGLVRQKPHPFPLHKKWEAARNQTEASLFRALAALADLEIKRKSGGIPADLGIETFLLQRLR
Ga0207646_105154962	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LDILYGRYLFPIADELRQTIGIMSFARVNRIDLQKPIQYNRFKDTIADRLGEYLKANGIVRQKPHPFPLHKKWEAAREQTEADLFRALAEIADLDIKRKSGGVPVDLGLEMFLLARR
Ga0207650_115801211	3300025925	Switchgrass Rhizosphere	PLADEVRQMIGVVSFARTHRIDLKAPMNYNRFKDTLADRLGDYLKANGLVRQKPHPFPLHKKWEAARNQTEANLFRALAALADLEIKRKSGGIPADLGIETFLLQRMRG
Ga0207686_104868642	3300025934	Miscanthus Rhizosphere	DAKAPLEIHYGKFLFPLADELRQMIGIVSFARSQNLDLSRSIQYNRFKDTVADRLGDYLKNNGLVRQRPHPFPLHKKWEAARGANEAALFRALAAIADLEVKRKSGGLPVDVGLETFLLARIRA
Ga0207670_117866681	3300025936	Switchgrass Rhizosphere	RREDAKAPLDIHYGKFLFPLADELRQMIGILSYARTNRLDLRASMPYNRFKDTVADRLGEYLKANGIVRQKPHPFPLHKKWEAARGHGEAELFAALAAIADLEIKRKSGGIPVDVGMEAFLLSRAR
Ga0207661_108533721	3300025944	Corn Rhizosphere	KFLFPLADEVRQMIGIVAYARMNNLDLRRSIQYNRFKDTVADRLGDYLKANGLVRQRPHPFPLHKKWEAASRYSEADLFRTLAQLAELEVKRKSGGVPVDVGLETFLLARAR
Ga0207639_122973562	3300026041	Corn Rhizosphere	SIDIQYGKFLFPLADELRQLIAIHSFARAANLNLRQSIQYNRFKDTIAEKLGDYMKNAGIVRQRPHPFPLHKKWSAAGAQREEDLWRALALVADLEVKRKSGGLPVDVGMETFLLSRLRA
Ga0207648_103642483	3300026089	Miscanthus Rhizosphere	EILYGRFLFPIAEELRQMIGILSYARVHGIDIRKSMPYTRFKDTLADRVGDYLKQHGLVRQRPHPFPLHKKWEAARGQSEAELFRALAAVADLEVKRKSGGIPVDVGLETFLLSSLRRP
Ga0207675_1018662981	3300026118	Switchgrass Rhizosphere	FLFPLAEEIRQMIGIHSFARTHNVNLKASMQYNRFKDSIADKLGDYLKTFGLVRQRPHPFPLHKKWEAARTMSESDLFRALAEIADLDIKRKSGGMPVDLGLETFLLQRVRG
Ga0209839_102759472	3300026294	Soil	AIRSYARTKNIDLKASMNYNRFKDTVADALGDYMKTLGLVRQRPHPFSLHKKWEAARSQTDGGLFRALAAIADLDVKRKSGGVPVELGLETFLLSQVKS
Ga0209157_10649003	3300026537	Soil	YLFPIADELRQTIGIISFARANKIDLQKTMQYNRFKDTLADRLGDYLKANGIVRQKPHPFPLHKRWEAARGQSEEELFRALAAIADLDVKRKSGGVPVDLGLEMFLLSRR
Ga0209577_108209221	3300026552	Soil	FPIADEIRQRIGIISFAHANKIDLKKSIQYNRFRDTIADGLGEYLKERGIVRQKPHPFPLHKKWEAAPEHSEADLFRALAEIADLEIKRKSGGVPVDLGLEMFLLSRR
Ga0207505_1056401	3300027459	Soil	IAKLRDLVAQARRDDPKAPLDIQYGKFLFPLADEVRQMIGIVSFARTQRIDLKATMNYNRFKDTLADRLGESLKANGLVRQKPHPFPLHKKWEAARNQSEASLFRALAALADLEIKRKSGGIPADLGIETFLLQRLRG
Ga0247675_10035381	3300028072	Soil	RREDPKAPLDIQYGKFLFPLADEVRQMIGIVSFARTQRIDLKATMNYNRFKDTLADRLGESLKANGLVRQKPHPFPLHKKWEAARNQSEASLFRALAALADLEIKRKSGGIQADLGIETFLLQRLRG
Ga0247682_10124082	3300028146	Soil	PQARREDPKAPLDIQYGKFLFPLADEVRQMIGIVSFARTQRIDLKAPMNYNRFKDTLADRLGESLKANGLVRQKPHPFPLHKKWEAARNQSEASLFRALAALADLEIKRKSGGIPADLGIETFLLQRLRG
Ga0307502_100247151	3300031164	Soil	DPKMPLDMHYGRFLFPLADELRQMIGIHSWARVHDMNLRQSMQYNRFKDTIADRLGDYLKAHGLVRQRPHPFPLHKKWEAARNSSEAELFRALAYVADLEIKRKSGGLPVDIGIETFLLSRLRG
Ga0307468_1018003432	3300031740	Hardwood Forest Soil	MIEAVAKLRGLVAQARREDAKIPTDILYGRYLFPIADELRQMIGIISFARANKIDLKAPMHYNRFKDTLADRLGEYLKSNGIVRQRPHPFPLHKKWEAVRDQNEADLFRALAEIADLDVKRKSGGIPVDLGLEMFLLARR
Ga0335076_103207472	3300032955	Soil	PLADELRQLIAIHSFARTANLNLRQSVQYNRFKDTIAEKLGDSMKNAGIVRQRPHPFPLHKKWSAAGAQREEDLWRALAFVADLEVKRKSGGLPVDIGMETFLLSRLRT
Ga0334938_124511_2_352	3300034236	Biocrust	HYGRFLFPLADEVRQMIGIHSWARVNNVNLKQSMHYNRFKDTIADRLGDYMKNHALVRQRPHPFPLLKKWEAARTYSEADLFRALSQLADLEIKRKSGGLPVDLGIETFLLARLRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092133

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences