NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F092142

Metagenome Family F092142

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092142
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 60 residues
Representative Sequence MTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERIERKEADRV
Number of Associated Samples 80
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 51.40 %
% of genes near scaffold ends (potentially truncated) 29.91 %
% of genes from short scaffolds (< 2000 bps) 78.50 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (58.879 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(22.430 % of family members)
Environment Ontology (ENVO) Unclassified
(74.766 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(79.439 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Mixed Signal Peptide: No Secondary Structure distribution: α-helix: 60.23%    β-sheet: 0.00%    Coil/Unstructured: 39.77%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF06123CreD 45.79
PF09859Oxygenase-NA 4.67
PF00563EAL 2.80
PF00990GGDEF 1.87
PF00814TsaD 0.93
PF027373HCDH_N 0.93
PF03448MgtE_N 0.93
PF13147Obsolete Pfam Family 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG4452Inner membrane protein CreD involved in colicin E2 resistanceDefense mechanisms [V] 45.79
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 2.80
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 2.80
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 2.80
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 2.80
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.93
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 0.93
COG0533tRNA A37 threonylcarbamoyltransferase TsaDTranslation, ribosomal structure and biogenesis [J] 0.93
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.93
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.93
COG1214tRNA A37 threonylcarbamoyladenosine modification protein TsaBTranslation, ribosomal structure and biogenesis [J] 0.93
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.93
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 0.93
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 0.93
COG2239Mg/Co/Ni transporter MgtE (contains CBS domain)Inorganic ion transport and metabolism [P] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.88 %
UnclassifiedrootN/A41.12 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459015|G14TP7Y02HLSRINot Available582Open in IMG/M
3300005328|Ga0070676_11460460All Organisms → cellular organisms → Bacteria → Proteobacteria526Open in IMG/M
3300005329|Ga0070683_100939944Not Available830Open in IMG/M
3300005331|Ga0070670_100131816All Organisms → cellular organisms → Bacteria → Proteobacteria2158Open in IMG/M
3300005331|Ga0070670_100161769All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1940Open in IMG/M
3300005335|Ga0070666_10043274All Organisms → cellular organisms → Bacteria → Proteobacteria3015Open in IMG/M
3300005335|Ga0070666_10084990All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2167Open in IMG/M
3300005336|Ga0070680_100171952All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1823Open in IMG/M
3300005339|Ga0070660_100572833All Organisms → cellular organisms → Bacteria → Proteobacteria943Open in IMG/M
3300005344|Ga0070661_100371912All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella1125Open in IMG/M
3300005344|Ga0070661_100486010Not Available987Open in IMG/M
3300005347|Ga0070668_100162054All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella fugitiva1815Open in IMG/M
3300005347|Ga0070668_101445485Not Available628Open in IMG/M
3300005355|Ga0070671_100032566All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4309Open in IMG/M
3300005364|Ga0070673_100058288All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae3053Open in IMG/M
3300005367|Ga0070667_100002019All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria17976Open in IMG/M
3300005367|Ga0070667_100887270All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300005367|Ga0070667_101762939Not Available583Open in IMG/M
3300005437|Ga0070710_10809701Not Available670Open in IMG/M
3300005439|Ga0070711_100241055Not Available1414Open in IMG/M
3300005439|Ga0070711_100589799All Organisms → cellular organisms → Bacteria → Proteobacteria926Open in IMG/M
3300005535|Ga0070684_101933194Not Available557Open in IMG/M
3300005539|Ga0068853_100306157All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella1470Open in IMG/M
3300005539|Ga0068853_101346914Not Available690Open in IMG/M
3300005548|Ga0070665_100032338All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae5265Open in IMG/M
3300005548|Ga0070665_100457929All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella vulcania1285Open in IMG/M
3300005548|Ga0070665_100722017All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica1009Open in IMG/M
3300005548|Ga0070665_102467580Not Available522Open in IMG/M
3300005563|Ga0068855_100664221All Organisms → cellular organisms → Bacteria1118Open in IMG/M
3300005564|Ga0070664_101283601Not Available691Open in IMG/M
3300005614|Ga0068856_100164782All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales2228Open in IMG/M
3300005618|Ga0068864_101180640Not Available763Open in IMG/M
3300005843|Ga0068860_100738756All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria995Open in IMG/M
3300005937|Ga0081455_10485535Not Available834Open in IMG/M
3300005983|Ga0081540_1000647All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae32945Open in IMG/M
3300006358|Ga0068871_100683926All Organisms → cellular organisms → Bacteria → Proteobacteria939Open in IMG/M
3300006881|Ga0068865_101173668Not Available679Open in IMG/M
3300009093|Ga0105240_11876355Not Available624Open in IMG/M
3300009101|Ga0105247_10032036All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella fugitiva3192Open in IMG/M
3300009174|Ga0105241_12068943Not Available562Open in IMG/M
3300009177|Ga0105248_10041074All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae5185Open in IMG/M
3300009545|Ga0105237_10351667All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1478Open in IMG/M
3300009551|Ga0105238_11692570All Organisms → cellular organisms → Bacteria → Proteobacteria663Open in IMG/M
3300010371|Ga0134125_10601724All Organisms → cellular organisms → Bacteria → Proteobacteria1215Open in IMG/M
3300010375|Ga0105239_10665302All Organisms → cellular organisms → Bacteria → Proteobacteria1190Open in IMG/M
3300011119|Ga0105246_12226402All Organisms → cellular organisms → Bacteria → Proteobacteria534Open in IMG/M
3300012212|Ga0150985_121559838All Organisms → cellular organisms → Bacteria → Proteobacteria816Open in IMG/M
3300012469|Ga0150984_108185197Not Available537Open in IMG/M
3300012469|Ga0150984_117078415Not Available605Open in IMG/M
3300012924|Ga0137413_11782126Not Available508Open in IMG/M
3300012943|Ga0164241_11330121Not Available530Open in IMG/M
3300012960|Ga0164301_10884770Not Available691Open in IMG/M
3300013105|Ga0157369_10116301All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae2840Open in IMG/M
3300013105|Ga0157369_12201233Not Available559Open in IMG/M
3300013296|Ga0157374_12184979All Organisms → cellular organisms → Bacteria → Proteobacteria580Open in IMG/M
3300013307|Ga0157372_11494564All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300014969|Ga0157376_11832355All Organisms → cellular organisms → Bacteria → Proteobacteria643Open in IMG/M
3300020027|Ga0193752_1127498All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300020060|Ga0193717_1000774All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae20341Open in IMG/M
3300020060|Ga0193717_1066876All Organisms → cellular organisms → Bacteria → Proteobacteria1215Open in IMG/M
3300020061|Ga0193716_1004879All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter7169Open in IMG/M
3300021403|Ga0210397_10797765All Organisms → cellular organisms → Bacteria → Proteobacteria729Open in IMG/M
3300021445|Ga0182009_10677567Not Available557Open in IMG/M
3300021475|Ga0210392_10296299All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300022897|Ga0247764_1074332All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella1048Open in IMG/M
3300022897|Ga0247764_1247557Not Available542Open in IMG/M
3300022897|Ga0247764_1276240Not Available512Open in IMG/M
3300022910|Ga0247768_1147152Not Available717Open in IMG/M
3300023275|Ga0247776_10095504All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella1153Open in IMG/M
3300025900|Ga0207710_10259114Not Available871Open in IMG/M
3300025903|Ga0207680_10017908All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales3751Open in IMG/M
3300025903|Ga0207680_10060098All Organisms → cellular organisms → Bacteria → Proteobacteria2312Open in IMG/M
3300025903|Ga0207680_11168422All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis549Open in IMG/M
3300025911|Ga0207654_10635079All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300025911|Ga0207654_10923607Not Available633Open in IMG/M
3300025912|Ga0207707_10121309All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae2286Open in IMG/M
3300025914|Ga0207671_11370745Not Available549Open in IMG/M
3300025919|Ga0207657_10721996All Organisms → cellular organisms → Bacteria → Proteobacteria773Open in IMG/M
3300025919|Ga0207657_11168000Not Available586Open in IMG/M
3300025924|Ga0207694_10086962All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2461Open in IMG/M
3300025925|Ga0207650_10124911All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella immobilis2007Open in IMG/M
3300025931|Ga0207644_10468339Not Available1036Open in IMG/M
3300025933|Ga0207706_10469200Not Available1088Open in IMG/M
3300025938|Ga0207704_10126769Not Available1759Open in IMG/M
3300025938|Ga0207704_11559219Not Available567Open in IMG/M
3300025942|Ga0207689_10200041All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella immobilis1649Open in IMG/M
3300025972|Ga0207668_10991989Not Available750Open in IMG/M
3300025986|Ga0207658_10057475All Organisms → cellular organisms → Bacteria2891Open in IMG/M
3300026035|Ga0207703_10306410Not Available1450Open in IMG/M
3300026035|Ga0207703_11871675Not Available576Open in IMG/M
3300026041|Ga0207639_10268403All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella1496Open in IMG/M
3300026041|Ga0207639_11811616Not Available571Open in IMG/M
3300026088|Ga0207641_10595766All Organisms → cellular organisms → Bacteria → Proteobacteria1081Open in IMG/M
3300026088|Ga0207641_11163649Not Available770Open in IMG/M
3300026116|Ga0207674_10710481All Organisms → cellular organisms → Bacteria → Proteobacteria970Open in IMG/M
3300026116|Ga0207674_11263448All Organisms → cellular organisms → Bacteria → Proteobacteria708Open in IMG/M
3300028379|Ga0268266_10032130All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales4459Open in IMG/M
3300028379|Ga0268266_10669464All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella999Open in IMG/M
3300028380|Ga0268265_10136314All Organisms → cellular organisms → Bacteria → Proteobacteria2048Open in IMG/M
3300028381|Ga0268264_10278132All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella1566Open in IMG/M
3300031616|Ga0307508_10223676All Organisms → cellular organisms → Bacteria → Proteobacteria1482Open in IMG/M
3300032074|Ga0308173_12279476Not Available511Open in IMG/M
3300032770|Ga0335085_10171458All Organisms → cellular organisms → Bacteria → Proteobacteria2693Open in IMG/M
3300032828|Ga0335080_11240148Not Available748Open in IMG/M
3300033004|Ga0335084_11735350Not Available613Open in IMG/M
3300033004|Ga0335084_11846031Not Available591Open in IMG/M
3300033179|Ga0307507_10419596Not Available752Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere22.43%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere8.41%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere7.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere6.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.61%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter4.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.74%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.87%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.87%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza1.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.93%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.93%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459015Litter degradation PV4EngineeredOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300020027Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300020061Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1EnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300022897Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4EnvironmentalOpen in IMG/M
3300022910Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6EnvironmentalOpen in IMG/M
3300023275Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4PV_000024102170459015Switchgrass, Maize And Mischanthus LitterMTQYKTTDELYNEKRRERAAEIISALMRKRRRTTTDEALLDQEALRAAAQRADDNEAGQA
Ga0070676_1146046023300005328Miscanthus RhizosphereMTQFKTNDELYSEQRRQRAAELIAAIVRKRRRVTTDESLLDQEALRAAAERADRRERQLAD*
Ga0070683_10093994423300005329Corn RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERIERKEADRVE*
Ga0070670_10013181623300005331Switchgrass RhizosphereMTQYKTSEELYSEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAASTRAEQTETDHVG*
Ga0070670_10016176923300005331Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRAAAERIERKEADRVE*
Ga0070666_1004327433300005335Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRAAAERIERNEADRVE*
Ga0070666_1008499023300005335Switchgrass RhizosphereMTQYKTSDELYNEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAALTRAEQTETDRAG*
Ga0070680_10017195223300005336Corn RhizosphereMTQSKTSDELYNEKRRQHAAELISAIVSKRRRITTDESLLDQEALRAAAERAARKETRRAD*
Ga0070660_10057283313300005339Corn RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERIERKQADRVE*
Ga0070661_10037191223300005344Corn RhizosphereMTQYKTSDELYNEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAAAVRADESEIERAG*
Ga0070661_10048601013300005344Corn RhizosphereMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERA
Ga0070668_10016205423300005347Switchgrass RhizosphereMTQTKTSEELYNEQRRQRAAELIAAIVRKRRRVTTDEALLDQEALRAAAERMPTQET*
Ga0070668_10144548513300005347Switchgrass RhizosphereMNQSKSGEELYNEQRRQRAAELIAAIVRKRRRVDTDESLLDQEALRADAERIATSQKRA*
Ga0070671_10003256623300005355Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRVAAERIERKQADRVE*
Ga0070673_10005828813300005364Switchgrass RhizosphereVVHAGPAYGILMTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERIERKEADRVE*
Ga0070667_100002019143300005367Switchgrass RhizosphereMTQSKTSDELYNEQRRQRAAELIAALVRKRQRVSTDEALLDQAALREAAERAGLAEKSAD
Ga0070667_10088727013300005367Switchgrass RhizosphereMTQSKTSEELYNEQRRQRAAELIAALVRKRRRVSTDEALLDQDALRRAAERNANRQNPD*
Ga0070667_10176293913300005367Switchgrass RhizosphereMTQYKTSEELYSEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAASTRAEQTEADHVG*
Ga0070710_1080970113300005437Corn, Switchgrass And Miscanthus RhizosphereMTQSKTSDELYTEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAVGKEAENVD*
Ga0070711_10024105523300005439Corn, Switchgrass And Miscanthus RhizosphereMTQSKNSDELYNEQRRQRAAELIAAIVRKRRRVTTDESLLDLEALRTAAGRVRTNER
Ga0070711_10058979923300005439Corn, Switchgrass And Miscanthus RhizosphereMTQSKSTDELFNEQRRRHAAELIAALVRKRRRITTDEALLDQESLRAAADRLARKESERAD*
Ga0070684_10193319423300005535Corn RhizosphereMTQSKTSDELYNEKRRQHAAELISAIVRKRRRITTDESLLDQEALRAAAERI
Ga0068853_10030615713300005539Corn RhizosphereMTQSKSSDELYSEKRRQHAAELIRALVRKRRRITTDESLLDQEALREAAERAAIKEAESAD*
Ga0068853_10134691423300005539Corn RhizosphereMTQYKTSDELYNEKRRERAAEIIGALMRKRRRTTTDEALLDQEALRAAAARTDPSDAERLG*
Ga0070665_10003233843300005548Switchgrass RhizosphereMANTKTSDELYSEQRRQRAAELIRAIVRNRRRVKTDQSLLDQEALRTAVEQGTVSERELAD*
Ga0070665_10045792923300005548Switchgrass RhizosphereMDFVSARKTERMTQYKTSDELYNEKRRERAAEIIGALMRKRRRTTTDEALLDQEALRAASVRTDESETGRAD*
Ga0070665_10072201723300005548Switchgrass RhizosphereMDFVSARKTERMTQYKTSDELYNEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAAAVRVDESEIERAG*
Ga0070665_10246758023300005548Switchgrass RhizosphereDNAQLPTLRVVHVGPAHGILMTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERIERKEADRVE*
Ga0068855_10066422123300005563Corn RhizosphereMTQSKNSDELYNEQRRQRAAELIAAIVRKRRRVTTDESLLDQEALRNAAGRVGQAERELAD*
Ga0070664_10128360123300005564Corn RhizosphereMTQYKTSEELYSEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAASTRAGQTEADHVG*
Ga0068856_10016478213300005614Corn RhizosphereMTQSKTSDELYNEKRRQHAAELISAIVSKRRRITTDESLLDQEALRAAAERIERKEADRVE*
Ga0068864_10118064023300005618Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERIERK
Ga0068860_10073875623300005843Switchgrass RhizosphereMTQSKSSEEIYTEQRRQRAAELIAALVRKRRRVTTDEALLDQEALRAASERAERRQTSE*
Ga0081455_1048553523300005937Tabebuia Heterophylla RhizosphereMTQYKTSDELYNEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAASTRAEQNETDHAG*
Ga0081540_100064763300005983Tabebuia Heterophylla RhizosphereMDRVMTQSKNSDELYAEQRRQRAAEIIAALMRKRRRVTTDEALLDQETLRAATERARTREKIAE*
Ga0068871_10068392623300006358Miscanthus RhizosphereTNDELYSEQRRQRAAELIAAIVRKRRRVTTDESLLDQEALRAAAERADRRERQLAD*
Ga0068865_10117366823300006881Miscanthus RhizosphereMDFVSARKTERMTQYKTSDELYNEKRRERAAEIIAALMRKRRRTTTDEALLDQEALR
Ga0105240_1187635523300009093Corn RhizosphereMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAARKDAGPAD*
Ga0105247_1003203623300009101Switchgrass RhizosphereMTQTKTSEELYNEQRRQRAAELIAAIVRKRRRVTTDEALLDQEALRAAVERMPTQET*
Ga0105241_1206894313300009174Corn RhizosphereMTQSKSSDELYSEKRRQHAAELIRALVRKRRRITTDESLLDQEALREAAERTAIKEAESAD*
Ga0105248_1004107433300009177Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRAAAERIERKQADRVE*
Ga0105237_1035166723300009545Corn RhizosphereMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAARKEAGPAD*
Ga0105238_1169257013300009551Corn RhizosphereMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAARKEAGLAD*
Ga0134125_1060172423300010371Terrestrial SoilMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAASERAARREAEPRE*
Ga0105239_1066530223300010375Corn RhizosphereMTQYKTSEELYSEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAALTRAEQTETDRAG*
Ga0105246_1222640213300011119Miscanthus RhizosphereAMTESKSTEELYNEQRRQRAAELIAAIVRKRRRVDTDEALLDHEALRATIERVKTPRKQA
Ga0150985_12155983823300012212Avena Fatua RhizosphereMTQSKTNDELYSEQRRQRAAELIAALVRKRRRVTTDEALLDQESLRTAAEHIKGKVKDAELL*
Ga0150984_10818519723300012469Avena Fatua RhizosphereMTETKSSDELYNEQRRQRAAELIAAIVRKRRRVTTDEALLDQEALRAATNPQRNERGQAPRSA*
Ga0150984_11707841523300012469Avena Fatua RhizosphereMTQSKTSDELFSEKRRRHAAEQIAALVRRRRRITTDEALLDQEALREAAERAARNEGEHAD*
Ga0137413_1178212613300012924Vadose Zone SoilMTQSKNSDELYNEQRRQRAVELIAAIVRKRRRVTTDESLLDQEALRAAAGR
Ga0164241_1133012113300012943SoilMTQSKTSDELYNEKRRQHAAELISAIVSKRRRITTDESLLDQEALRAAAERAARREAERAD*
Ga0164301_1088477023300012960SoilMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAARKEAGRID*
Ga0157369_1011630133300013105Corn RhizosphereMTQSKTSDELYNEKRRQHAAELISAIVSRRRRITTDESLLDQEALRAAAERAARKETRRAD*
Ga0157369_1220123313300013105Corn RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERIERKEA
Ga0157374_1218497923300013296Miscanthus RhizosphereFINDTPTTEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAVGKEAENVD*
Ga0157372_1149456423300013307Corn RhizosphereMTQSKASDELYNEKRRQHAAELISAIVSKRRRITTDESLLDQEALRAAAERAARKETRRAD*
Ga0157376_1183235523300014969Miscanthus RhizosphereTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRVAAERIERKQADRVE
Ga0193752_112749813300020027SoilMTQSKTNEELYTEQRRQRAAELIAALVRKRRRVSTDESLLDQEALRRAAERTTLRQIPD
Ga0193717_1000774113300020060SoilMTQSKTNEELYTEQRRQRAAELIAALVRKRRRVSTDESLLDQEALRAAAERTALRQNPD
Ga0193717_106687623300020060SoilMTEAKSSDELYNEQRRQRAAELIAAIVRKRRRTTTDEALLDQEALRTAAERVDVNGRKHV
Ga0193716_100487953300020061SoilMTEAKSSDELYNEQRRQRAAELIAAIVRKRRRLTTDEALLDQESLRAAAERMNSNGRERV
Ga0210397_1079776513300021403SoilMTQSKTSDELYNEKRRQYAAELIGAIVRKRRRITTDESLLDQEALRAAAERAARKEAERA
Ga0182009_1067756713300021445SoilHVRSASEILMTQSKNSDELYNEQRRRRAAELIAALVRKRRRITTDESLLDQEALRAAAERIERKEADRVE
Ga0210392_1029629923300021475SoilMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAARTEV
Ga0247764_107433213300022897Plant LitterMTQYKTSDEIYNEKRRERAAEIIGALLRKRRRTTTDEALLDQEALRAATTRVDHDDAEGM
Ga0247764_124755713300022897Plant LitterMDFVSARKTERMTQYKTSDELYNEKRRERAAEIIGALMRKRRRTTTDEALLDQEALRAAAVRTDESEAGRAD
Ga0247764_127624023300022897Plant LitterMTTQFKNDHQRFNEQRRQRAAELIAAIVRKRRRVTTDEALLDHETLRT
Ga0247768_114715213300022910Plant LitterMDFVSARKTERMTQYKTSDELYNEKRRERAAEIIGALMRKRRRTTTDEALLDQEALRAASVRTDESETGRAD
Ga0247776_1009550413300023275Plant LitterMTQYKTSDELYNEKRRERAAEIIGALMRKRRRTTTDEALLDQEALRAASVR
Ga0207710_1025911413300025900Switchgrass RhizosphereMTQTKTSEELYNEQRRQRAAELIAAIVRKRRRVTTDEALLDQEALRAAAERMPTQET
Ga0207680_1001790823300025903Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRAAAERIERNEADRV
Ga0207680_1006009823300025903Switchgrass RhizosphereMTQYKTSEELYSEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAASTRAEQTEADHV
Ga0207680_1116842213300025903Switchgrass RhizosphereMTQYKTSDELYNEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAALTRAEQTETDRA
Ga0207654_1063507913300025911Corn RhizosphereMTQSKNSDELYNEQRRQRAAELIAAIVRKRRRVTTDESLLDQEALRNAAG
Ga0207654_1092360723300025911Corn RhizosphereMTQSKSSDELYSEKRRQHAAELIRALVRKRRRITTDESLLDQEALREAAERTAIKEAESA
Ga0207707_1012130923300025912Corn RhizosphereMTQSKTSDELYNEKRRQHAAELISAIVSKRRRITTDESLLDQEALRAAAERAARKETRRA
Ga0207671_1137074513300025914Corn RhizosphereMTQSKNSDELYNEQRRQRAAELIAAIVRKRRRVTTDESLLDQEALRNAAGRVGQAERELA
Ga0207657_1072199613300025919Corn RhizosphereDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRAAAERIERNEADRVE
Ga0207657_1116800023300025919Corn RhizosphereMTQYKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAARKEA
Ga0207694_1008696213300025924Corn RhizosphereMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAARKEAGPA
Ga0207650_1012491123300025925Switchgrass RhizosphereMTQYKTSEELYSEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAASTRAEQTETDHV
Ga0207644_1046833923300025931Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRVAAERIERKQADRV
Ga0207706_1046920023300025933Corn RhizosphereMTQYKTSEELYSEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAASTRAEQTET
Ga0207704_1012676923300025938Miscanthus RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRAAAERIERKEADRV
Ga0207704_1155921923300025938Miscanthus RhizosphereMDFVSARKTERMTQYKTSDELYNEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAAAVRADESE
Ga0207689_1020004123300025942Miscanthus RhizosphereMTQFKTNDELYSEQRRQRAAELIAAIVRKRRRVTTDESLLDQEALRAAAERADRRERQLA
Ga0207668_1099198923300025972Switchgrass RhizosphereMNQSKSGEELYNEQRRQRAAELIAAIVRKRRRVDTDELLLDQEALRADAERIATSQKRA
Ga0207658_1005747533300025986Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERIERKEADRV
Ga0207703_1030641023300026035Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERI
Ga0207703_1187167513300026035Switchgrass RhizosphereMTQFKTNDELYSEQRRQRAAELIAAIVRKRRRVTTDESLLDQEALRAAAERADRRERQAADWARWMATIAA
Ga0207639_1026840313300026041Corn RhizosphereMTQSKSSDELYSEKRRQHAAELIRALVRKRRRITTDESLLDQEALREAAERAAIKEAESA
Ga0207639_1181161613300026041Corn RhizosphereMTQYKTSDELYNEKRRERAAEIIAALMRKRRRTSTDEALLDQEALRAALTRAEQTETDRA
Ga0207641_1059576613300026088Switchgrass RhizosphereGILMTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRAAAERIERNEADRVE
Ga0207641_1116364923300026088Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRIITDESLLDQEALRVA
Ga0207674_1071048113300026116Corn RhizosphereFGDYLMTQSKTSDELYNEKRRQHAAELISAIVSKRRRITTDESLLDQEALRAAAERAARKETRRAD
Ga0207674_1126344823300026116Corn RhizosphereMTQSKSSDELYNELRRRHAAELIAALVRKRRRIITDESLLDQEALRAAAERIERNEADRV
Ga0268266_1003213033300028379Switchgrass RhizosphereMANTKTSDELYSEQRRQRAAELIRAIVRNRRRVKTDQSLLDQEALRTAVEQGTVSERELA
Ga0268266_1066946423300028379Switchgrass RhizosphereMDFVSARKTERMTQYKTSDELYNEKRRERAAEIIAALMRKRRRTTTDEALLDQEALRAAAVRADESEIERAG
Ga0268265_1013631433300028380Switchgrass RhizosphereMTQSKSSEEIYTEQRRQRAAELIAALVRKRRRVTTDEALLDQEALRAASERAERRQTSE
Ga0268264_1027813223300028381Switchgrass RhizosphereMTQSKSSDELYNEQRRRHAAELIAALVRKRRRITTDESLLDQEALRAAAERIERKQADRV
Ga0307508_1022367623300031616EctomycorrhizaIPLMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAERAARKEAEHAD
Ga0308173_1227947623300032074SoilMTHSKTSDELYTEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAVAERAARKETEHA
Ga0335085_1017145833300032770SoilMTQTKTNEELYSEKRRERAAELIAAIVRKRRRVTTDESLLDQEALRATTDRAERESAR
Ga0335080_1124014823300032828SoilMTQAKTSEELYSEKRRERAAELIAAIVRKRRRVTTDESLLDQESLRAAAERAEREPAR
Ga0335084_1173535013300033004SoilMTQSKTSDELYSEKRRQHAAELIGAIVRKRRRITTDESLLDQEALREAAERAARDEAE
Ga0335084_1184603123300033004SoilKTSDELYSEKRRRHAAELIGAIVRKRRRITTDESLLDQEALREAAERAARDEAERAD
Ga0307507_1041959613300033179EctomycorrhizaMTQSKTSDELYNEKRRQHAAELIGAIVRKRRRITTDESLLDQEALRAAAE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.