Metagenome Family F092147

Basic Information
Family ID	F092147
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	88 residues
Representative Sequence	MAAVLDLEPAYWRLLVIHAPRIAVDRLTRDIRSGRFGRDGLRARARDLRAHLRPDIRERARTELFPALDMASDGLEPSAHFD
Number of Associated Samples	88
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	33.02 %
% of genes near scaffold ends (potentially truncated)	44.86 %
% of genes from short scaffolds (< 2000 bps)	80.37 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Most Common Taxonomy
Group	Unclassified (50.467 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.822 % of family members)
Environment Ontology (ENVO)	Unclassified (47.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.439 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.45% β-sheet: 1.82% Coil/Unstructured: 52.73%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.25.1: TROVE domain-like	d1yvra1	1yvr	0.72491
a.47.1.1: STAT	d1bg1a1	1bg1	0.70536
e.25.1.1: Sec1/munc18-like (SM) proteins	d1mqsa_	1mqs	0.6847
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.68307
a.118.1.2: HEAT repeat	d1b3ua_	1b3u	0.67058

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13977	TetR_C_6	10.28
PF12900	Pyridox_ox_2	6.54
PF00118	Cpn60_TCP1	4.67
PF07992	Pyr_redox_2	1.87
PF00440	TetR_N	1.87
PF00069	Pkinase	1.87
PF13545	HTH_Crp_2	0.93
PF13060	DUF3921	0.93
PF03819	MazG	0.93
PF00166	Cpn10	0.93
PF00990	GGDEF	0.93
PF09998	DUF2239	0.93
PF13443	HTH_26	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.48
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	4.67
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
All Organisms	root	All Organisms	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
cellular organisms	root	All Organisms → cellular organisms	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	20.56 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	10.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.56 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	10.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.56 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.56 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	6.54 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.56 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6.54 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2127587	Not Available	759	Open in IMG/M
3300000559\|F14TC_100511440	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300000956\|JGI10216J12902_106518886	Not Available	3173	Open in IMG/M
3300003997\|Ga0055466_10071982	Not Available	897	Open in IMG/M
3300004114\|Ga0062593_100154076	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1749	Open in IMG/M
3300004156\|Ga0062589_100142996	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300005327\|Ga0070658_11202324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	659	Open in IMG/M
3300005333\|Ga0070677_10293558	Not Available	823	Open in IMG/M
3300005337\|Ga0070682_100548758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	904	Open in IMG/M
3300005337\|Ga0070682_101064540	Not Available	675	Open in IMG/M
3300005338\|Ga0068868_100671912	Not Available	924	Open in IMG/M
3300005340\|Ga0070689_101085309	Not Available	715	Open in IMG/M
3300005343\|Ga0070687_101532941	Not Available	502	Open in IMG/M
3300005345\|Ga0070692_10229855	Not Available	1101	Open in IMG/M
3300005355\|Ga0070671_100818212	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	812	Open in IMG/M
3300005355\|Ga0070671_102032381	Not Available	512	Open in IMG/M
3300005356\|Ga0070674_100055221	All Organisms → cellular organisms → Bacteria	2749	Open in IMG/M
3300005365\|Ga0070688_101733902	Not Available	512	Open in IMG/M
3300005367\|Ga0070667_100084025	Not Available	2728	Open in IMG/M
3300005444\|Ga0070694_100271329	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1290	Open in IMG/M
3300005456\|Ga0070678_101521387	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	627	Open in IMG/M
3300005459\|Ga0068867_100858879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	814	Open in IMG/M
3300005467\|Ga0070706_101161522	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	710	Open in IMG/M
3300005564\|Ga0070664_100914783	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300005578\|Ga0068854_100304195	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1291	Open in IMG/M
3300005578\|Ga0068854_102082352	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	524	Open in IMG/M
3300005615\|Ga0070702_100802719	Not Available	728	Open in IMG/M
3300005617\|Ga0068859_100977706	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	929	Open in IMG/M
3300005718\|Ga0068866_10225732	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300005718\|Ga0068866_10326750	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	967	Open in IMG/M
3300005834\|Ga0068851_10582445	Not Available	679	Open in IMG/M
3300006049\|Ga0075417_10522619	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	598	Open in IMG/M
3300006358\|Ga0068871_100210869	Not Available	1680	Open in IMG/M
3300006755\|Ga0079222_10356227	Not Available	992	Open in IMG/M
3300006806\|Ga0079220_12150140	Not Available	501	Open in IMG/M
3300006844\|Ga0075428_100182701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2270	Open in IMG/M
3300006844\|Ga0075428_100241302	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300006844\|Ga0075428_102269923	Not Available	559	Open in IMG/M
3300006845\|Ga0075421_100105478	All Organisms → cellular organisms → Bacteria	3543	Open in IMG/M
3300006845\|Ga0075421_100852270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1044	Open in IMG/M
3300006846\|Ga0075430_100671866	Not Available	854	Open in IMG/M
3300006847\|Ga0075431_101084469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	766	Open in IMG/M
3300006847\|Ga0075431_101939878	Not Available	544	Open in IMG/M
3300006880\|Ga0075429_100915733	Not Available	767	Open in IMG/M
3300006880\|Ga0075429_101123727	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	686	Open in IMG/M
3300006969\|Ga0075419_10512372	Not Available	835	Open in IMG/M
3300009094\|Ga0111539_10086696	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3679	Open in IMG/M
3300009100\|Ga0075418_10210345	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2071	Open in IMG/M
3300009147\|Ga0114129_10374647	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1881	Open in IMG/M
3300009147\|Ga0114129_13049823	Not Available	549	Open in IMG/M
3300009176\|Ga0105242_10073876	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300009176\|Ga0105242_12631160	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	552	Open in IMG/M
3300009551\|Ga0105238_11702634	Not Available	662	Open in IMG/M
3300009553\|Ga0105249_10062797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3411	Open in IMG/M
3300010038\|Ga0126315_10478844	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	791	Open in IMG/M
3300010375\|Ga0105239_10075898	Not Available	3696	Open in IMG/M
3300010399\|Ga0134127_12197305	Not Available	631	Open in IMG/M
3300012509\|Ga0157334_1043173	Not Available	597	Open in IMG/M
3300012514\|Ga0157330_1038169	Not Available	634	Open in IMG/M
3300012519\|Ga0157352_1074876	Not Available	555	Open in IMG/M
3300012955\|Ga0164298_10052236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1970	Open in IMG/M
3300012957\|Ga0164303_10481144	Not Available	790	Open in IMG/M
3300012958\|Ga0164299_10432278	Not Available	856	Open in IMG/M
3300012961\|Ga0164302_10043523	All Organisms → cellular organisms → Bacteria	2173	Open in IMG/M
3300012987\|Ga0164307_10255628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1225	Open in IMG/M
3300013297\|Ga0157378_12005125	Not Available	629	Open in IMG/M
3300013306\|Ga0163162_10021435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6364	Open in IMG/M
3300015265\|Ga0182005_1082662	Not Available	888	Open in IMG/M
3300015371\|Ga0132258_10069247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	8176	Open in IMG/M
3300015371\|Ga0132258_11403855	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300015371\|Ga0132258_12613643	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1261	Open in IMG/M
3300015371\|Ga0132258_13009215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1168	Open in IMG/M
3300015371\|Ga0132258_13475500	Not Available	1080	Open in IMG/M
3300015372\|Ga0132256_100164488	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2240	Open in IMG/M
3300015373\|Ga0132257_100179411	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300015373\|Ga0132257_100378142	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300015374\|Ga0132255_101283073	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300025315\|Ga0207697_10005753	All Organisms → cellular organisms → Bacteria	5713	Open in IMG/M
3300025321\|Ga0207656_10434031	Not Available	663	Open in IMG/M
3300025899\|Ga0207642_10329546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	894	Open in IMG/M
3300025912\|Ga0207707_10026184	All Organisms → cellular organisms → Bacteria	5098	Open in IMG/M
3300025925\|Ga0207650_10167533	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300025931\|Ga0207644_10684569	Not Available	855	Open in IMG/M
3300025934\|Ga0207686_10219042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1373	Open in IMG/M
3300025936\|Ga0207670_10966315	Not Available	716	Open in IMG/M
3300025941\|Ga0207711_12029205	Not Available	518	Open in IMG/M
3300025945\|Ga0207679_10797304	Not Available	861	Open in IMG/M
3300025945\|Ga0207679_11088965	Not Available	733	Open in IMG/M
3300025960\|Ga0207651_11586922	Not Available	589	Open in IMG/M
3300025981\|Ga0207640_10549174	Not Available	970	Open in IMG/M
3300025981\|Ga0207640_10966939	Not Available	747	Open in IMG/M
3300025986\|Ga0207658_11067994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	737	Open in IMG/M
3300025986\|Ga0207658_11165448	Not Available	704	Open in IMG/M
3300026088\|Ga0207641_10272499	Not Available	1588	Open in IMG/M
3300026089\|Ga0207648_10057572	All Organisms → cellular organisms → Bacteria	3391	Open in IMG/M
3300026142\|Ga0207698_12120432	Not Available	575	Open in IMG/M
3300026905\|Ga0207516_1020648	Not Available	544	Open in IMG/M
3300027787\|Ga0209074_10161049	Not Available	815	Open in IMG/M
3300027907\|Ga0207428_10147184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1795	Open in IMG/M
3300027909\|Ga0209382_10126490	All Organisms → cellular organisms → Bacteria	2978	Open in IMG/M
3300028379\|Ga0268266_10546124	Not Available	1110	Open in IMG/M
3300031716\|Ga0310813_10091947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2341	Open in IMG/M
3300031938\|Ga0308175_100512438	Not Available	1277	Open in IMG/M
3300031996\|Ga0308176_12876917	Not Available	511	Open in IMG/M
3300033412\|Ga0310810_10957211	Not Available	740	Open in IMG/M
3300033475\|Ga0310811_11135355	Not Available	656	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	66.36%
Environmental	Environmental	33.64%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	66.36%
Terrestrial	Environmental → Terrestrial	32.71%
Aquatic	Environmental → Aquatic	0.93%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	41.12%
Soil	Environmental → Terrestrial → Soil	32.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	24.30%
Marine	Environmental → Aquatic → Marine	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.95%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.87%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.41%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-10 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_21275872	3300000033	Soil	MAVPDGLARRRRTLGXXXSPXTRXXAVLXLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD*
F14TC_1005114402	3300000559	Soil	RRRRTLGVSLSPFTPIGAVLDLEPAYWRLLVLHVPGTAVDRLTRDIRSGRFGRDGLRARARXXRAHLRPDIRERARTELFPVLDMANDGLEP*
JGI10216J12902_1065188865	3300000956	Soil	MAIPDGLARRRRTLGLSRSSVTRIAAVLELEPAYWHLLVLHVPGIAVDRLTRDIRSGRFGRDGLRARARHLRAHLRPDIRERARTELFPMLDMANDGLEP*
Ga0055466_100719821	3300003997	Natural And Restored Wetlands	NAQPLSLAELAPAYWHILVSRAPRIAADRLARDIQSGQFGVEGLRARARDLGAHLRPDIRERARTELFPALDIGDDGVAPTAHLDWR*
Ga0062593_1001540764	3300004114	Soil	MDLAPAYWRLLVRRVPGTVVDRLTRDIRSGLFGIDELRERARDLRTHLRPDIRERARLEVFPALEMATDGPDPAARLD*
Ga0062589_1001429962	3300004156	Soil	MAVPDGLARRRRTLGGLPSPFTRVPAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD*
Ga0070658_112023241	3300005327	Corn Rhizosphere	MAIPDGLARRRRTLGVSRSPFTRAAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGPDGLLARAQDLRAHLRPDIRERARTE
Ga0070677_102935581	3300005333	Miscanthus Rhizosphere	MAVPDGLARRRRTLGGLPSPFTRVPSVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD*
Ga0070682_1005487582	3300005337	Corn Rhizosphere	MAIPDGLARRRRTLGVSRSPFTRAAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGPDGLLARAQDLRAHLRPD
Ga0070682_1010645401	3300005337	Corn Rhizosphere	PDGLARRRRTLGGLPSPFTRVPAVLDLEPAYWRLLVLHAPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD*
Ga0068868_1006719122	3300005338	Miscanthus Rhizosphere	MAIPDGLARRRRTLGVSRSPFTRAAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGPDGLLARAQDLRAHLRPDIRERARTELFPELDTANDGLEPSARFD*
Ga0070689_1010853091	3300005340	Switchgrass Rhizosphere	MEPAYWRLLVLHVPRIAVDRLTRDIHSGRFGRDGLRARARHLRAHLRPDIRERARTELFPVLDMANDRLVP*
Ga0070687_1015329411	3300005343	Switchgrass Rhizosphere	RRTLGLSRSPFTRIAAVLEMEPAYWRLLVLHVPRIAVDRLTRDIHSGRFGRDGLRARARHLRAHLRPDIRERARTELFPVLDMANDRLVP*
Ga0070692_102298552	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MAVPDGLARRRRTLGGLPSPFTRVPAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLD
Ga0070671_1008182122	3300005355	Switchgrass Rhizosphere	MAIPDGLARRRRTLGLSRSPVTPIAAVLDLEPAYWRLLVLHVPRTAVDRLTRDIRSGRFGRDGLRARAQDLRAHPRPDIRERARTELFPVLDMANDGLEPVSAPRLTLTP*
Ga0070671_1020323811	3300005355	Switchgrass Rhizosphere	MAIPDGLARRRRTLGLSRSPFTPIAAVLDLEPAYWRLLVLHVPRTAVDRLTRDIRSGRFGRDGLRARARDLRAHLRPDIRERARTELF
Ga0070674_1000552213	3300005356	Miscanthus Rhizosphere	LSRSPFTPIAAVLDLEPAYWRLLVLHVPRTAVDRLTRDIRSGRFGRDGLRARARDLRAHLRPDIRERARTELFPVLDMANDGLEPSTHFD*
Ga0070688_1017339021	3300005365	Switchgrass Rhizosphere	LVLHVPGIALDRLTRDIRSGRFGPDGLLARAQDLRAHLRPDIRERARTELFPELDTANDGLEPSARFD*
Ga0070667_1000840253	3300005367	Switchgrass Rhizosphere	VYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD*
Ga0070694_1002713293	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAVPDGLARRRRTLGGLPSPFTRVPAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRP
Ga0070678_1015213871	3300005456	Miscanthus Rhizosphere	MAIPDGLARRRRTLGVSRSPFTRVAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGPDGLLARAQDLRAHLRPDIRE
Ga0068867_1008588792	3300005459	Miscanthus Rhizosphere	MHDPRDAEGRIGSAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMASDGIESSAHFD*
Ga0070706_1011615222	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTLELAPAYWRILLLHVPRTAVDRVTRDIRTGQFGGEGLRARARDLRAHMRPDIRERARLELFPALEMGDDGLEPSAHFD*
Ga0070664_1009147833	3300005564	Corn Rhizosphere	VPDGLARRRRTLGVSRSPVAPVGAVLELEPAYWRLLVLHVPGTAVDRLTRDIRSGRFGRDGLRARARQLRAHVRPDVRERARTEVLPVLDMANDGLDASAHFDCPDSP*
Ga0068854_1003041952	3300005578	Corn Rhizosphere	MAIPDGLARRRRTLGVSRSPFTRVAPVLDLEPAYWRLLVLHVPGTAVDRLTRDIRSGRFGRDGLLARAQDLRAHFRPDIRERARTELFPELDTANDGLEPSARFD*
Ga0068854_1020823522	3300005578	Corn Rhizosphere	LVLWAPDIAVEHLARDIGSGRFHHGGLRARAQDLRAHLRPEIRERARTEFFTALDMGDDGLGPGARFD*
Ga0070702_1008027191	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MAIPDGLARRRRTLGVSRSPFTRVAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPELDTANDGLEPSARFD*
Ga0068859_1009777061	3300005617	Switchgrass Rhizosphere	LEMEPAYWRLLVLHVPRIAVDRLTRDIHSGRFGRDGLRARARHLRAHLRPDIRERARTELFPVLDMANDRLVP*
Ga0068866_102257321	3300005718	Miscanthus Rhizosphere	MHDPRDAEGRIGSAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMASDGLESSAHFD*
Ga0068866_103267502	3300005718	Miscanthus Rhizosphere	VLHVPGIALDRLTRDIRSGRFGWDGLLARAQDLRAHLRPVIRERARTELFPVLDMANDGLEPSTHFD*
Ga0068851_105824451	3300005834	Corn Rhizosphere	PAYWRLLVRRVPGTVVDRLTRDIRSGLFGIDELRERARDLRTHLRPDIRERARLEVFPALEMATDGPDPAARLD*
Ga0075417_105226192	3300006049	Populus Rhizosphere	AIPHALARRRRALGLSRSPVAPLIALMDLAPAYWHLLVLHVPQIAVDRLARDIRSGRFGRDGLRARARDLRAHLRPDIRERARLELFPALDMGTDGLEPPAYFD*
Ga0068871_1002108692	3300006358	Miscanthus Rhizosphere	MAIPDGLARRRRTLGVSRSPFTRVAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGWDGLLARAQDLRAHLRPVIRERARTELFPELDTANDGLEPSARFD*
Ga0079222_103562272	3300006755	Agricultural Soil	MMPPPVPPTGTLVELAPAYWRILVSRVPRTAADRLARDIRSGRFGRDGLQARARDLSVHSRADIRERARTEFLPALDLGEDGLEPSSHVD*
Ga0079220_121501402	3300006806	Agricultural Soil	MVRSPFTRVAVVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGRDGLRARAQDLRAHLRRDIRERARTELLVRDMANDGLDPSARSD*
Ga0075428_1001827012	3300006844	Populus Rhizosphere	VSHSPFTRVAAVLDLEPAYWRLLVLRAPGIAVDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPVLDMANDGLEPSVHFD*
Ga0075428_1002413023	3300006844	Populus Rhizosphere	MDLAPAYWRLLVLHVPQIAVDRLARDIRSGRFGRDGLRARARDLRAHLRPDIRERARLELFPALDMGTDGLEPPAYFD*
Ga0075428_1022699232	3300006844	Populus Rhizosphere	MTRIAAVRDLEPAYWRLLVRHAPRIAVDRLMRDIRSRQFDHEGLRARARDLRAHGRAEIRERALAELVHVLDMR
Ga0075421_1001054783	3300006845	Populus Rhizosphere	MAISDGLARRRWTLGVSHSPFTRVAAVLDLEPAYWRLLVLRAPGIAVDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPVLDMANDGLEPSVHFD*
Ga0075421_1008522702	3300006845	Populus Rhizosphere	HALARRRRALGLARSPFAPLIALMDLAPAYWRLLVLHVPQIAVDRLARDIRSGRFGRDGLRARARDLRAHLRPDIRERARLELFPALDMGTDGLEPPAYFD*
Ga0075430_1006718662	3300006846	Populus Rhizosphere	MDLSPAYWRILVTRGPRVATDLLARDIRSGLFARDGLRARARDLRAHLYADIRERARTEFFPALDMGPDPLEQSTRFD*
Ga0075431_1010844691	3300006847	Populus Rhizosphere	RRPHRVRSDEPVMAISDGLARRRWTLGVSHSPFTRVAAVLDLEPAYWRLLVLRAPGIAVDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPVLDMANDGLEPSVHFD*
Ga0075431_1019398781	3300006847	Populus Rhizosphere	DEPVMAIPDALARRRGTLGVSRSPMTRIAAVRDLEPAYWRLLVRHAPRIAVDRLMRDIRSRQFDHEGLRARARDLRAHGRAEIRERALAELVHVLDMRNDGLEPAAEHRLTLMP*
Ga0075429_1009157332	3300006880	Populus Rhizosphere	MAISDGLARRRWTLGVSHSPFTRVAAVLDLEPAYWRLLVLRAPGIAVDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRE
Ga0075429_1011237272	3300006880	Populus Rhizosphere	RLLVLHVPQIAVDRLARDIRSGRFGRDGLRARARDLRAHLRPDIRERARLELFPALDMGTDGLEPPAYFD*
Ga0075419_105123722	3300006969	Populus Rhizosphere	MDLSPAYWRILVTRGPRVATDLLARDIRSGLFARDGLRARARDLSAHLYADICERARTEFFPALDMGPDPLEQSTRFD*
Ga0111539_100866967	3300009094	Populus Rhizosphere	SDEPVMAISDGLARRRWTLGVSHSPFTRVAAVLDLEPAYWRLLVLRAPGIAVDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPVLDMANDGLEPSVHFD*
Ga0075418_102103452	3300009100	Populus Rhizosphere	LDLEPAYWRLLVLRAPGIAVDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPVLDMANDGLEPSVHFD*
Ga0114129_103746474	3300009147	Populus Rhizosphere	MDVAPAYWRLLVHTVPGIAVDRLAREIRSGRFVTEGLRARARDLRTHPRGDIRERARLELFPVLDMGDDGLEPSAHFD*
Ga0114129_130498231	3300009147	Populus Rhizosphere	MYFAPTSIATTMEIAPAYWRLLVHDVPGIAVDRLVREIRSGRLITEGLRARARDLRTHLRADIRERARLELFP
Ga0105243_127551632	3300009148	Miscanthus Rhizosphere	ARDIRSGRFGPDGLLARAQDLRAHLRPDIRERARTELFPELDTANDGLEPSARFD*
Ga0105242_100738763	3300009176	Miscanthus Rhizosphere	MHDPRDAEGRIGSAAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMASDGLESSAHFD*
Ga0105242_126311602	3300009176	Miscanthus Rhizosphere	RDIGSGQFHHGGLRARAQDLRAHLRPEIRERARTEFFTALDMGDDGLGPGARFD*
Ga0105238_117026341	3300009551	Corn Rhizosphere	LDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFPELDTANDGLEPSARFD*
Ga0105249_100627971	3300009553	Switchgrass Rhizosphere	LDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD*
Ga0126315_104788442	3300010038	Serpentine Soil	ERLARDIGSGRFHNGGLRARAQDLRAHLRPEIRERARTEFFTALDMGDDGLGPGARFD*
Ga0105239_100758985	3300010375	Corn Rhizosphere	LDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGRDGLLARAQDLRAHFRPDIRERARAELFPELDTANDGLEPSARFD*
Ga0134127_121973051	3300010399	Terrestrial Soil	MHDPRDAEGRIGSAAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRVHLRPDVRERARTELFPALDMASDGLESSAHFD*
Ga0157334_10431732	3300012509	Soil	MSRSPVTRIAAVLELEPAYWRLLVLHVPRIAVDRLTRDIRSGRFGRDGLCGRAQDLRAHLRPDIRERARTELFPLLDMANDGLEPSAHFD*
Ga0157330_10381691	3300012514	Soil	MSYFTSISTVATPEIAPAYWRLLVHDVPGIAVDRLAREIRSGQFISEGLRARARDLRTHLRADIRERARLELFPTLDMGNDGLEPSAHFD*
Ga0157352_10748761	3300012519	Unplanted Soil	MAIPDGLARRRRTLGLSGSPFTRIGAVLELEPAYWRLLVLHVPSIAVDRLTRDIRSGRFGRDGLCGRAQDLRAHLRPDIRERARTELFPMLDMANDGLEPTAQFD*
Ga0164298_100522362	3300012955	Soil	MHDRRDAEGRIGSAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMASDGLESSAHFD*
Ga0164303_104811441	3300012957	Soil	MHDPHDAEGRIGSAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMA
Ga0164299_104322781	3300012958	Soil	MHDPHDAEGRIGSAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMASDGLESSAHFD*
Ga0164302_100435232	3300012961	Soil	MHDPHDAEGRIGSAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRELARTELFPALDMASDGLESSAHFD*
Ga0164307_102556281	3300012987	Soil	MHDPHDAECRIGSAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMASDGLESSAHFD*
Ga0157378_120051252	3300013297	Miscanthus Rhizosphere	LDLEPAYWRLLVLHVPRTAVDRLTRDIRSGRYGRDGLRARARDLRAHLRPDIRERARTELFPVLDMANDGLEPSTHFD*
Ga0163162_100214354	3300013306	Switchgrass Rhizosphere	LDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRDHLRPDIRERARTELFVRDMANDGLDPSARFD*
Ga0182005_10826622	3300015265	Rhizosphere	MPRIATDMDVAPAYWRLLVRRVPGTAVDRLTRDIRSGLFGIEELRERARDLRTHLRPDIRERARLEVFPALEMATDGPDPAARLD*
Ga0132258_1006924710	3300015371	Arabidopsis Rhizosphere	MSRSPVTRIAAVLELEPAYWRLLVLHVPRIAVDRLTRDIRSGRFGHDGLRARARHLRAHLRPDIRERARTELFPMLDMANDGLEPTAQFD*
Ga0132258_114038553	3300015371	Arabidopsis Rhizosphere	LSGSPFTRIGAVLELEPAYWRLLVLHVPSIAVDRLTRDIRSGRFGRDGLCGRAQDLRAHLRPDIRERARTELFPLLDMANDGLEPSAHFD*
Ga0132258_126136432	3300015371	Arabidopsis Rhizosphere	MAAVLDLEPAYWRLLVIHAPRIAVDRLTRDIRSGRFGRDGLRARARDLRAHLRPDIRERARTELFPALDMASDGLEPSAHFD*
Ga0132258_130092152	3300015371	Arabidopsis Rhizosphere	MSPSPVLAAGTLLDLAPAYWRILVSRVPRTAADRLARDIRSGQFARDGLRSRARDLRTHSRPDIRERARLEFFPALDMGHDGLEPAADGTA*
Ga0132258_134755002	3300015371	Arabidopsis Rhizosphere	LAAAYWRILVSRVPRTAADRLARDIRSGQFARAGLRDRARDLAAHTRADIRDRARTELFPALDMDDDGLGPALRC*
Ga0132256_1001644881	3300015372	Arabidopsis Rhizosphere	LSGSPFTRIGAVLELEPAYWRLLVLHVPSIAVDRLTRDIRSGRFGRDGLCGRAQDLRAHLRPDIRERARTELFPMLDMANDGLEPTAQFD*
Ga0132257_1001794115	3300015373	Arabidopsis Rhizosphere	LSGSPFTRIGAVLELEPAYWRLLVLHVPSIAVDRLTRDIRSGRFGRDGLCGRAQDLRAHLRPDIRERARTELFPLLDMANDGLEPTAQFD*
Ga0132257_1003781421	3300015373	Arabidopsis Rhizosphere	IGANLDGPGMAIPDGLARRRRTLGVSRSPFPPLAAVLDLEPAYWRLLVLHAPRIAVDRLTRDIRSGRFGRDGLRARARDLRAHLRPDIRERARTELFPALDMASDGLEPSAHFD*
Ga0132255_1012830731	3300015374	Arabidopsis Rhizosphere	LVLHVPRIAVDRLTRDIRSGRFGHDGLRARARHLRAHLRPDIRERARTELFPMLDMANDRLEP*
Ga0207697_100057535	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MAVPDGLARRRRTLGGLPSPFTRVPAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD
Ga0207656_104340312	3300025321	Corn Rhizosphere	LARRRRTLGGLPSPFTRVPAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD
Ga0207642_103295462	3300025899	Miscanthus Rhizosphere	PRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMASDGLESSAHFD
Ga0207707_100261844	3300025912	Corn Rhizosphere	MDLAPAYWRLLVRRVPGTVVDRLTRDIRSGLFGIDELRERARDLRTHLRPDIRERARLEVFPALEMATDGPDPAARLD
Ga0207650_101675331	3300025925	Switchgrass Rhizosphere	RSDEPVMAIADGLARRRWTLGMSRSPFTRVAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPELDTANDGLEPSARFD
Ga0207644_106845691	3300025931	Switchgrass Rhizosphere	MAIPDGLARRRRTLGVSRSPFTRVAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGWDGLLARAQDLRAHLRPVIRERARTELFPELDTANDGLEPSARFD
Ga0207686_102190422	3300025934	Miscanthus Rhizosphere	MHDPRDAEGRIGSAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMASDGLESSAHFD
Ga0207670_109663152	3300025936	Switchgrass Rhizosphere	MEPAYWRLLVLHVPRIAVDRLTRDIHSGRFGRDGLRARARHLRAHLRPDIRERARTELFPVLDMANDRLVP
Ga0207711_120292052	3300025941	Switchgrass Rhizosphere	RRRRTLGLSRSPFTRIAAVLEMEPAYWRLLVLHVPRIAVDRLTRDIHSGRFGRDGLRARARHLRAHLRPDIRERARTELFPVLDMANDRLVP
Ga0207679_107973042	3300025945	Corn Rhizosphere	AVPDGLARRRRTLGVSRSPVAPVGAVLELEPAYWRLLVLHVPGTAVDRLTRDIRSGRFGRDGLRARARQLRAHVRPDVRERARTEVLPVLDMANDGLDASAHFDCPDSP
Ga0207679_110889651	3300025945	Corn Rhizosphere	RRRPHRIRSDEPVMAIPDGLARRRRTLGVSRSPFTRVAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPELDTANDGLEPSARFD
Ga0207651_115869221	3300025960	Switchgrass Rhizosphere	VGSATDMDLAPAYWRLLVRRVPGTVVDRLTRDIRSGLFGIDELRERARDLRTHLRPDIRERARLEVFPALEMATDGPDPAARLD
Ga0207640_105491741	3300025981	Corn Rhizosphere	MEPAYWRLLVLHVPRIAVDRLTRDIHSGRFGRDGLRARARHLRAHLRPDIRERARTEFPVLD
Ga0207640_109669392	3300025981	Corn Rhizosphere	AVDRLTRDIHSGRFGRDGLRARARHLRAHLRPDIRERARTELFPELDTANDGLEPSARFD
Ga0207658_110679941	3300025986	Switchgrass Rhizosphere	MAIPDGLARRRRTLGVSRSPFTRVAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGWDGLLARAQDLRAHLRPVIRERARTELFPELDTANDG
Ga0207658_111654482	3300025986	Switchgrass Rhizosphere	VRRLPSPFTRVPAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD
Ga0207641_102724992	3300026088	Switchgrass Rhizosphere	LDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGREGLRARAQDLRAHLRPDIRERARTELFVRDMANDGLDPSARFD
Ga0207648_100575724	3300026089	Miscanthus Rhizosphere	MHDPRDAEGRIGSAAAAVLDLEPTYWRLLVLHAPRTAVDRLARDISSGQFGRDGLRARARDLRAHLRPDVRERARTELFPALDMASDGLESSAHFD
Ga0207698_121204322	3300026142	Corn Rhizosphere	MAITDGLARRRRTLGLSRSPFTRIAAVLEMEPAYWRLLVLHVPRIAVDRLTRDIHSGRFGRDGLRARARHLRAHLRPDIRERARTEFPVLDMANDRLVP
Ga0207516_10206482	3300026905	Soil	MAIPHALARRRRTLGVSRSPFTRAAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGPDGLLARAQDLRAHLRPDIRERARTEFPELDTADDGLEPNLEGESLR
Ga0209074_101610492	3300027787	Agricultural Soil	MMPPPVPPTGTLVELAPAYWRILVSRVPRTAADRLARDIRSGRFGRDGLQARARDLSVHSRADIRERARTEFLPALDLGEDGLEPSSHVD
Ga0207428_101471843	3300027907	Populus Rhizosphere	AVDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPVLDMANDGLEPSVHFD
Ga0209382_101264907	3300027909	Populus Rhizosphere	MAISDGLARRRWTLGVSHSPFTRVAAVLDLEPAYWRLLVLRAPGIAVDRLTRDIRSGRFGRDGLRARAQDLRAHLRPDIRERARTELFPVLDMANDGLEPSVHFD
Ga0268266_105461242	3300028379	Switchgrass Rhizosphere	MEPAYWRLLVLHVPRIAVDRLTRDIHSGRFGRDGLRARARHLRAHLRLDIRERARTELFVRDMANDGLDPSARFD
Ga0310813_100919475	3300031716	Soil	MAIPDGLARRRRTLGVSRSPFTRAAAVLDLEPAYWRLLVLHVPGIALDRLTRDIRSGRFGPDGLLARAQDLRAHLRPDIRERARTEFP
Ga0308175_1005124382	3300031938	Soil	MPRIATDMDLAPAYWRLLVRRVPSTAVDRLTRDIRSALFGIEGLRERARDLRTHIRPDIRERARLEVFPALEMETDGLEPAAPVD
Ga0308176_128769171	3300031996	Soil	PGTAVDRLTRDIRSALFGIEGLRERARDLRTHIRPDIRERARLEVFPALEMETDGLEPAAPVD
Ga0310810_109572111	3300033412	Soil	SAPTGVLDLAPAYWRILVDRVPRIAADRLARDIRSGGFGQEGLRARVQDLRSHIRPDIRDRARMEFLPMLDLAPDGIEPFMHFD
Ga0310811_111353551	3300033475	Soil	AAVLEMEPAYWRLLVLHVPRIAVDRLTRDIHSGRFGRDGLRARARHLRAHLRPDIRERARTELFPVLDMANDRLVP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092147

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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