Metagenome / Metatranscriptome Family F092249

Basic Information
Family ID	F092249
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	58 residues
Representative Sequence	HVAEAAALCAELADLPEKIGPRLTHDQIEQTMRETHSVEMLKADGIWDDWVSGKRGRQK
Number of Associated Samples	99
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	97.20 %
% of genes from short scaffolds (< 2000 bps)	89.72 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Most Common Taxonomy
Group	Bacteria (88.785 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (9.346 % of family members)
Environment Ontology (ENVO)	Unclassified (17.757 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.336 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.68% β-sheet: 0.00% Coil/Unstructured: 56.32%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03741	TerC	69.16
PF13456	RVT_3	3.74
PF02910	Succ_DH_flav_C	3.74
PF12867	DinB_2	1.87
PF01761	DHQ_synthase	1.87
PF00364	Biotin_lipoyl	0.93
PF00873	ACR_tran	0.93
PF08281	Sigma70_r4_2	0.93
PF04389	Peptidase_M28	0.93
PF00890	FAD_binding_2	0.93
PF00275	EPSP_synthase	0.93
PF01209	Ubie_methyltran	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	69.16
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.93
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.79 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.75 %
Unclassified	root	N/A	11.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.21 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_2778147	All Organisms → cellular organisms → Bacteria → Acidobacteria	1172	Open in IMG/M
3300000955\|JGI1027J12803_103017740	Not Available	831	Open in IMG/M
3300001084\|JGI12648J13191_1003302	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300002245\|JGIcombinedJ26739_100194327	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300004080\|Ga0062385_10258688	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300004080\|Ga0062385_10290731	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300004152\|Ga0062386_101294705	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300004479\|Ga0062595_100665136	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300005434\|Ga0070709_10109925	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300005467\|Ga0070706_100106361	All Organisms → cellular organisms → Bacteria	2610	Open in IMG/M
3300005545\|Ga0070695_100155376	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300005712\|Ga0070764_10617641	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005764\|Ga0066903_107381103	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300005884\|Ga0075291_1033433	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005952\|Ga0080026_10119585	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006032\|Ga0066696_10823602	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006059\|Ga0075017_101689701	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006162\|Ga0075030_100592745	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300006237\|Ga0097621_101193714	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300006755\|Ga0079222_11799196	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006893\|Ga0073928_10259011	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300006893\|Ga0073928_10365156	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300006903\|Ga0075426_10965826	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006954\|Ga0079219_10852245	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300009683\|Ga0116224_10187015	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300010048\|Ga0126373_12912629	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300010048\|Ga0126373_13032914	Not Available	523	Open in IMG/M
3300010359\|Ga0126376_11719672	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300010364\|Ga0134066_10126892	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300010937\|Ga0137776_1378517	All Organisms → cellular organisms → Bacteria → Acidobacteria	1094	Open in IMG/M
3300012210\|Ga0137378_10147945	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300012683\|Ga0137398_10663690	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300012925\|Ga0137419_10983400	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300012971\|Ga0126369_10012181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6672	Open in IMG/M
3300012971\|Ga0126369_11069411	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300014169\|Ga0181531_10260667	All Organisms → cellular organisms → Bacteria → Acidobacteria	1058	Open in IMG/M
3300015054\|Ga0137420_1443654	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300015241\|Ga0137418_10901496	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300015264\|Ga0137403_10940018	Not Available	713	Open in IMG/M
3300015265\|Ga0182005_1058799	Not Available	1049	Open in IMG/M
3300015372\|Ga0132256_101482382	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300016270\|Ga0182036_11425635	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300016445\|Ga0182038_10297911	All Organisms → cellular organisms → Bacteria → Acidobacteria	1317	Open in IMG/M
3300017961\|Ga0187778_10303006	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300017961\|Ga0187778_11048009	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300017972\|Ga0187781_10143438	All Organisms → cellular organisms → Bacteria → Acidobacteria	1674	Open in IMG/M
3300017973\|Ga0187780_10009621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7138	Open in IMG/M
3300017973\|Ga0187780_11176245	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300017975\|Ga0187782_10253253	All Organisms → cellular organisms → Bacteria → Acidobacteria	1323	Open in IMG/M
3300018006\|Ga0187804_10038798	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300018037\|Ga0187883_10157063	All Organisms → cellular organisms → Bacteria → Acidobacteria	1170	Open in IMG/M
3300018042\|Ga0187871_10464637	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300018047\|Ga0187859_10453084	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300018085\|Ga0187772_10546588	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300018088\|Ga0187771_10652974	All Organisms → cellular organisms → Bacteria → Acidobacteria	892	Open in IMG/M
3300018090\|Ga0187770_10675929	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300018090\|Ga0187770_10860062	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300019256\|Ga0181508_1245236	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300020579\|Ga0210407_11314619	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300020580\|Ga0210403_10846967	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300020583\|Ga0210401_11557217	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300021402\|Ga0210385_10011814	All Organisms → cellular organisms → Bacteria → Acidobacteria	5350	Open in IMG/M
3300021403\|Ga0210397_10045243	All Organisms → cellular organisms → Bacteria	2803	Open in IMG/M
3300021404\|Ga0210389_11085792	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300021479\|Ga0210410_10147994	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300022557\|Ga0212123_10243919	All Organisms → cellular organisms → Bacteria → Acidobacteria	1295	Open in IMG/M
3300024271\|Ga0224564_1123464	Not Available	531	Open in IMG/M
3300025509\|Ga0208848_1076776	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300025906\|Ga0207699_11164676	Not Available	571	Open in IMG/M
3300025910\|Ga0207684_11316691	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300025915\|Ga0207693_11200539	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300025928\|Ga0207700_10382363	All Organisms → cellular organisms → Bacteria → Acidobacteria	1231	Open in IMG/M
3300026217\|Ga0209871_1043648	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300026308\|Ga0209265_1144242	Not Available	608	Open in IMG/M
3300027334\|Ga0209529_1082683	Not Available	544	Open in IMG/M
3300027537\|Ga0209419_1060145	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300027587\|Ga0209220_1002432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5068	Open in IMG/M
3300027667\|Ga0209009_1080202	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300027821\|Ga0209811_10252105	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300027826\|Ga0209060_10178310	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300027911\|Ga0209698_10013367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8101	Open in IMG/M
3300029910\|Ga0311369_11000281	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300029943\|Ga0311340_11590002	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300029951\|Ga0311371_12100470	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300030057\|Ga0302176_10423308	Not Available	537	Open in IMG/M
3300030618\|Ga0311354_11806100	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300030707\|Ga0310038_10163746	All Organisms → cellular organisms → Bacteria → Acidobacteria	1093	Open in IMG/M
3300030862\|Ga0265753_1013658	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300031090\|Ga0265760_10076013	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300031128\|Ga0170823_12844629	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300031128\|Ga0170823_15793007	Not Available	518	Open in IMG/M
3300031249\|Ga0265339_10149996	All Organisms → cellular organisms → Bacteria → Acidobacteria	1180	Open in IMG/M
3300031546\|Ga0318538_10782578	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300031718\|Ga0307474_10401206	All Organisms → cellular organisms → Bacteria → Acidobacteria	1067	Open in IMG/M
3300031753\|Ga0307477_10663249	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300031823\|Ga0307478_11542734	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300031833\|Ga0310917_10309569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1069	Open in IMG/M
3300031845\|Ga0318511_10439752	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300031890\|Ga0306925_10972058	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300031938\|Ga0308175_100345388	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300031954\|Ga0306926_12500087	Not Available	566	Open in IMG/M
3300032160\|Ga0311301_10635631	All Organisms → cellular organisms → Bacteria → Acidobacteria	1525	Open in IMG/M
3300032180\|Ga0307471_102005112	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300032805\|Ga0335078_12641767	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300032892\|Ga0335081_10145232	All Organisms → cellular organisms → Bacteria	3406	Open in IMG/M
3300032895\|Ga0335074_10426893	All Organisms → cellular organisms → Bacteria → Acidobacteria	1420	Open in IMG/M
3300033158\|Ga0335077_11552228	Not Available	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.33%
Host-Associated	Host-Associated	4.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.37%
Aquatic	Environmental → Aquatic	14.95%
Plants	Host-Associated → Plants	4.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.70%
Freshwater	Environmental → Aquatic → Freshwater	8.41%
Peat	Environmental → Terrestrial → Peat	4.67%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.74%
Sediment	Environmental → Aquatic → Sediment	2.80%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.89%
Loam	Environmental → Terrestrial → Soil → Loam	14.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.02%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.74%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.35%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.74%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02042870	2088090014	Soil	AEAAALGFELANLYEKVGPRLTHNQIEQTMRDSNSVEMFKAFGLWDDWQSGKRGRQK
JGI1027J12803_1030177402	3300000955	Soil	HVAEAAAFAFELADLPQKIGPRLTHDQIEQTMRDTNSVEMLKADGIWDDWVSGKRGRQK*
JGI12648J13191_10033023	3300001084	Forest Soil	AQLKKHVAEAAALCVELADLSEKIGPRLTHDQIEQTMRETNSVEMLKADGIWDDWVSGKRGRQK*
JGIcombinedJ26739_1001943271	3300002245	Forest Soil	VLSFGLANLPEKVGPRLTHEQIDQTIRDTHSDDLFKAFGLWDDWTSGKRGRQK*
Ga0062385_102586881	3300004080	Bog Forest Soil	LSVELANLPQKIGPRLTHDQIHQTIVDTHSEELFKGFGLWDDWVSGQRGRQK*
Ga0062385_102907312	3300004080	Bog Forest Soil	LANLPEKVGPRLTHEQIDQIIHETHSDDLFKAFGLWDDWSSGKRGRQK*
Ga0062386_1012947051	3300004152	Bog Forest Soil	LKKHVAEAALLSLELADLPQKIGPRLTHDQIEQTMRATNSVGMLKADGIWDDWVSGKRGRQK*
Ga0062595_1006651362	3300004479	Soil	YDKVDFPQLKKHVAEATLLSLELANLDQKIGARLTHDQIEQTMRESNSVEMMKANGIWDDWISGKRGRQK*
Ga0070709_101099251	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LKKHVAEAAALSVELADLPGKIGPRLTHDQIEQTMRDTKSVGLLKAFGIWDDWASGQRGRQK*
Ga0070706_1001063613	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AEAAALSVELADLPTKIGPRLTRDQIEQTMRETNSVEMFKAFGIWDDWVSGQRGRQK*
Ga0070695_1001553761	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VDFPQLKKHVAEAALLSLELADLPEKIGPRLTHDQIEQTMRETNSVDMLKADGIWDDWVSGKRGRQK*
Ga0070764_106176411	3300005712	Soil	LKKHVAEAAALSVELADLPEKIGPRLTHDQIEQTIRETNSVELFKAFGIWDDWTSGQRGRQK*
Ga0066903_1073811031	3300005764	Tropical Forest Soil	LRKHVAETAVLSFGLANLKEKIGPRLTHDQIEQTIEESHSDALFKTLGLWDDWTTGKRGRQK*
Ga0075291_10334331	3300005884	Rice Paddy Soil	HVAEATLLSLELANLDQKIGARLTHDQIEQTMRESNSVEMMKDNGIWGDWVSGKRGRQK*
Ga0080026_101195852	3300005952	Permafrost Soil	GLADLPEKIGPRLTHDQIEQTMRDSNSVDMLKADGIWDEWVSGKRGREK*
Ga0066696_108236022	3300006032	Soil	QLKKHVAEAALLALELANLDQKVGPHLTHDQIEQTMRESKSVEMMKANGIWEDWVSGKRGRQK*
Ga0075017_1016897011	3300006059	Watersheds	VGLADMPEKIGPRLTHDQIEQTIRDSNSVELFKAFGIWDEWVGGKRGRAK*
Ga0075030_1005927452	3300006162	Watersheds	LANLPQKIGPRLTHDQIDQTIRDSNSVELFKSFGLWDDWVSGKRGRQP*
Ga0097621_1011937142	3300006237	Miscanthus Rhizosphere	ELADLPGKIGPRLTHDQIEQTMRDTKSVELLKAFGIWDDWANGKRGRQN*
Ga0079222_117991962	3300006755	Agricultural Soil	DFPQLKKHVAEAALLSLELADLPEKIGPRLTHDQIEQTMRETNSVDMLKADGIWDDWVSGKRGRQK*
Ga0073928_102590113	3300006893	Iron-Sulfur Acid Spring	DKVDFAQLKKHVAEAAAISVELADLPGKIGPRLSHDQIEQTMRETNSVELLKAFGIWDDWASGQRGRQK*
Ga0073928_103651561	3300006893	Iron-Sulfur Acid Spring	VDFPQLKRHVAEAATLSFELANLPERIGPRLTHAQIEQTMRDSHSYEMLKAAGVWDDWVGGKRGRQK*
Ga0075426_109658261	3300006903	Populus Rhizosphere	EAALLALEFANLDQKIGPRLTHDQIEQTMRESKSVEMMKANGIWEDWVSGKRGRQK*
Ga0079219_108522451	3300006954	Agricultural Soil	ELSFGLADLPEKIGPRLTHEQIEQTMRDSNSVEMLKADGIWDEWVSGKRGREK*
Ga0116224_101870152	3300009683	Peatlands Soil	VDFAQLKKHVAEAASLSVELANLPKKIGPRLTRDQIEQTMRETNSVELFKAFGIWDDWVNGQRGRQK*
Ga0126373_129126292	3300010048	Tropical Forest Soil	EAAALAVEMANLPQKIGPRLTHDEIEQTMRDTNSLDQFKAFGVWDDWVSGRRGRQK*
Ga0126373_130329142	3300010048	Tropical Forest Soil	SQLKKHVAEAAALTVELANLPEKIGARLTHDQIEQTMRDTNSVEMMKADGVWDDWVSGKRGRQK*
Ga0126376_117196722	3300010359	Tropical Forest Soil	HVAEAAALAFQLANLNEKVGPRLTHDQIEQTMRDTNSVDLFKAFGLWNDWQSGKRGRQK*
Ga0134066_101268922	3300010364	Grasslands Soil	EATLLSLELANLDQKIGVRLTHDQIEQTMRQSNSVEMMKANGIWDDWVSGKRGRQK*
Ga0137776_13785172	3300010937	Sediment	LKKHVAEAAALTVELANLPEKIGPRLTHDQIEQTMRDTDSVEMMKADGIWDDWVSGKRGRQK*
Ga0137378_101479453	3300012210	Vadose Zone Soil	ELADLPGKIGPRLTHDEIEQTMRETKSVDLLKAFGIWDDWASGQRGRQK*
Ga0137398_106636901	3300012683	Vadose Zone Soil	LKKHVAEAAGLSFGLADLPEKIGPRLSHEQIEQTMRDSNSVDMLKAEGIWDEWVSGKRGREK*
Ga0137419_109834002	3300012925	Vadose Zone Soil	FELANLPERIGPRLTHAQIEQTIDDSHSDEMLKAAGVWDDWVGGKRGREK*
Ga0126369_100121811	3300012971	Tropical Forest Soil	QLANLNEKVGPRLTHDQIEQTMRDTNSVEMFKSFGLWDDWQSGKRGRQK*
Ga0126369_110694111	3300012971	Tropical Forest Soil	VDFSQLKKHVAEAAALSLELADVDTKVGPRLTHDQIEQTMRDTNSVEMFRAFGLWDDWQSGKRGRQK*
Ga0181531_102606672	3300014169	Bog	EAAVLSFGLANLPEKVGPRLTHEQIDQTIRDTHSDDLFKAFGLWDDWTSGKRGRQK*
Ga0137420_14436548	3300015054	Vadose Zone Soil	VAEAATLSFELANLPEIIGPRLTHAQIEQAIHDSHFDEMLKAVGVWDDWVGGKRGRQK*
Ga0137418_109014962	3300015241	Vadose Zone Soil	YDKVDFPQLKKHVAEASVLAFELANLPEKIGRRLTRNQIEQSLRATHGDEMLKAAGIWDDWASGKRGREK*
Ga0137403_109400181	3300015264	Vadose Zone Soil	AELTFGLADLPEKIGPRLTHDQIEQTMRDSNSVDMLKADGIWDEWVSGKRGREK*
Ga0182005_10587992	3300015265	Rhizosphere	ALLALELANLDQKIGPRLTHEQIEQTMRESNSVDMFKAEGIWDDWQSGKRGRQK*
Ga0132256_1014823821	3300015372	Arabidopsis Rhizosphere	SFELASMDARIGPRLTHDQIEQTMRDSKSVEMFKAFGLWDDWQSGKRGRQK*
Ga0182036_114256351	3300016270	Soil	HVAETAVLSFGLASLPKKIGPRLSHDKIEQTIEESHSDALFKNLGLWDDWTSGKRGREK
Ga0182038_102979113	3300016445	Soil	VAEAAALAFQLANLNEKVGPRLTHDQIEQTMRDTNSVELFKAFGLWDDWQSGKRGRQK
Ga0187778_103030062	3300017961	Tropical Peatland	LANLPEKIGPRLTHDQIEQTMRESNGVDLLKTEGVWNDWVSGKRGRQK
Ga0187778_110480092	3300017961	Tropical Peatland	LANLPEKIGPRLTRDQIEQTMRDSNSVDELKADGIWDDWVNGKRGRQK
Ga0187781_101434381	3300017972	Tropical Peatland	KVDFEQLKKHVAEAAALSVELANLPEKIGPRLTHDQIEQTMRDTNSIEMLKAEGSWDDWVSGKRGRQK
Ga0187780_100096219	3300017973	Tropical Peatland	AALSTGLANLPEKIGPRLTHDQIEQTMRETNGVELLKSEGIWDDWVSGKRGRQK
Ga0187780_111762452	3300017973	Tropical Peatland	IELADLPQKIGPRLTHDEIEQTMRDTDSVDMLKADGVWDDWVSGKRGRQK
Ga0187782_102532531	3300017975	Tropical Peatland	AEATLLALELASLPEKIGPRLTHDQIEQTMRDTNSVEMLKADGIWDDWVSGKRGRQK
Ga0187804_100387981	3300018006	Freshwater Sediment	SVGLANLPEKIGPRLTHDQIEQTMRDTNSVDLLKADGIWDDWVSGKRGRQK
Ga0187883_101570631	3300018037	Peatland	LSVELADLPVKIGPRLSHDQIEQTMRESNSVEMLKANAIWDDWVSGQRGRQK
Ga0187871_104646371	3300018042	Peatland	KVDFPQLKKHVAEAAVLGLELASLSEKIGPRLTHDQIEQTMRESNSVDMLKADGIWDDWVSGKRGRQK
Ga0187859_104530842	3300018047	Peatland	YDKVDFAHLKKHVAEAAALSVEIADLPAKIWPRLTHDQIEQTMRESNSVDMLKANGIWDDWVSGKRGRQK
Ga0187772_105465882	3300018085	Tropical Peatland	AEAAALSVGLSNLPEKIGPRLTRDQIEQTMRDSNSVEMLKADGIWDDWVSGKRGRQK
Ga0187771_106529741	3300018088	Tropical Peatland	VDFAQLKKHVAEAAALCVGLANLPEKIGPRLTHDQIEQTMRDTNSVDLLKADGIWDDWVSGKRGRQK
Ga0187770_106759292	3300018090	Tropical Peatland	KKHVAEAAALSVGLANLPEKIGPRLTHDQIEQTMRESNGVELLKSDGVWDDWVSGKRGRQ
Ga0187770_108600622	3300018090	Tropical Peatland	ALELASLPEKIGPRLTHDQIEQTMRDTNSVEMLKADGIWDDWVSGKRGRQK
Ga0181508_12452361	3300019256	Peatland	DKVDFAQLKKHVAEAAALSVEIADLPAKIWPRLTHDQIEQTMRESNSVDMLKANGIWDDWVSGKRGRQK
Ga0210407_113146192	3300020579	Soil	EAAALSFELANLYEKVGPRLTHDQIEQTMRDTNSVEMFKAFGLWDDWQSGKRGRQK
Ga0210403_108469672	3300020580	Soil	AAALSVGIADLPAKVWPRLTHDQIEQTMRESNSVDMLKANGSWNDWVSGQRGRAK
Ga0210401_115572171	3300020583	Soil	AEAAVLSFGLANLPEKVGPRLTHDQIDQTIRDTHSDDLFKAFGLWDDWTSGKRGRQK
Ga0210385_100118142	3300021402	Soil	LKKHVAEAAVLGLELASLSEKIGPRLTHDQIEQTMRESNSVDMLKADGIWDDWVSGKRGRQK
Ga0210397_100452431	3300021403	Soil	QLKKHVAEAAALSIELADLPTKIGPRLTHDQIEQTMRDTNSVEMFKAFGIWDEWVSGQRGRQK
Ga0210389_110857921	3300021404	Soil	ELADLPTKIGPRLTHDQIEQTMRDTNSVEMFKAFGIWDEWVSGQRGRQK
Ga0210410_101479943	3300021479	Soil	YSLANLYEKIGPRLTHDQIEQTMRDSNSVDMLKADGIWDEWVSGKRGREK
Ga0212123_102439192	3300022557	Iron-Sulfur Acid Spring	EAAAISVELADLPGKIGPRLSHDQIEQTMRETNSVELLKAFGIWDDWASGQRGRQK
Ga0224564_11234642	3300024271	Soil	KHVAEAAALSVELANLPTKIGPRLTHDQIEQTMRESNSVEMLKANDIWDDWVSGQRGRQK
Ga0208848_10767761	3300025509	Arctic Peat Soil	LKKHVAEAAALSVELADLPTKIGPRLTRDQIELTMRETNSVELFKAFGIWDDWASGQRGRQK
Ga0207699_111646761	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AAALAFELADLPQKIGPRLTHDQIEQTIRDTKSVEMLKADGIWDDWVSGKRGRQK
Ga0207684_113166912	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VAEAAALSVELADLPTKIGPRLTRDQIEQTMRETNSVEMFKAFGIWDDWVSGQRGRQK
Ga0207693_112005391	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LSVELADVDTKVGPRLTHDQIEQTMRDTNSVEMFKAFGLWDDWQSGKRGRQK
Ga0207700_103823631	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AAALSFELANLYEKVGPRLTHDQIEQTMRDTNSVEMFKAFGLWDDWQSGKRGRQK
Ga0209871_10436482	3300026217	Permafrost Soil	GLADLPEKIGPRLTHDQIEQTMRDSNSVDMLKADGIWDEWVSGKRGREK
Ga0209265_11442421	3300026308	Soil	DAALLALELANLDQKIGPRLTHDQIEQTMRESKSVEMMKANGIWEDWVSGKRGRQK
Ga0209529_10826831	3300027334	Forest Soil	AAVLSFGLANLPEKVGPRLTHEQIDQTIRDTHSDDLFKAFGLWDDWTSGKRGRQK
Ga0209419_10601451	3300027537	Forest Soil	HVAEAAQLSVALADLPEKIGPRFTHEQIEQTMDETKSVDMLKANGIWDDWVSGKRGRQK
Ga0209220_10024326	3300027587	Forest Soil	GFELANLPERIGPRLTHAQIEQTMHDSHSDEMLKAAGIWDDWVGGRRGRQK
Ga0209009_10802022	3300027667	Forest Soil	AEAAELSVALADLPEKIGPRFTHEQIEQTMDETKSVDMLKANGIWDDWVSGKRGRQK
Ga0209811_102521051	3300027821	Surface Soil	HVAEAAALGFELANLYEKVGPRLTHDQIEQTMRDSNSVELFKAFGLWDDWQSGKRGRQK
Ga0209060_101783101	3300027826	Surface Soil	VAEAAVLSVELANLPQKIGPRLTHDQIEQTMRESNSIDMLKADGIWDDWVSGRRGRQK
Ga0209698_1001336710	3300027911	Watersheds	LSLELADLDDRVGPRLTHEQIEQTMRDTNSVEMFKAFGLWDDWQSGIRGRQK
Ga0311369_110002812	3300029910	Palsa	FGLANLPEKVGLRLTHEQIDQTIRETHSDDLFKAFGLWDDWTSGKRGRQK
Ga0311340_115900021	3300029943	Palsa	VAEAAALSVELADLPHKIGPRLTHDQIEQTMRDSNSVDMLKEDGVWEDWVSGKRGRQK
Ga0311371_121004701	3300029951	Palsa	TFGLANLPEKVGPRLTHEQIDQTIRDTHSDDLFKAFGLWDDWTSGKRGRQK
Ga0302176_104233082	3300030057	Palsa	VDFAQLKKHVAEAAELSFALADLPEKIGPRLTRPQIEQTMRDSHSIELFKAFGLWDDWESGRIGRQK
Ga0311354_118061001	3300030618	Palsa	KKHVAEAAVLSFGLANLPEKVGPRLTHEQIDQTIRETHSDDLFKAFGLWDDWTSGKRGRQ
Ga0310038_101637461	3300030707	Peatlands Soil	DFVQLKKHVAEAAALSVGLANLYAKVGPRLTHDQIEQTMRETNSVDMLKAFGLWDDWVGGTRGREK
Ga0265753_10136581	3300030862	Soil	QLKKHVAEAAELSVALADLPERIGPRFTHEQIEQTMDETKSVDMLKANGIWDDWVSGKRGRQK
Ga0265760_100760131	3300031090	Soil	HVAEAAALCAELADLPEKIGPRLTHDQIEQTMRETHSVEMLKADGIWDDWVSGKRGRQK
Ga0170823_128446292	3300031128	Forest Soil	DFVQLKKHVAEAATLSVELADLPEKIGPRLSHDQIEQTMRDTNSVELFKAFGIWDDWVSGQRGRQK
Ga0170823_157930071	3300031128	Forest Soil	PQLKKHVAEAAELSFGLADLPEKIGPRLTHDQIEQTMHDSNSVDMLKADGIWDEWVSGKRGREK
Ga0265339_101499961	3300031249	Rhizosphere	AEAAALSVELADLPTRIGPRLTHDQVEQTMRDTNSVEMFKAFGIWDEWVSGQRGRQK
Ga0318538_107825782	3300031546	Soil	KKHVAEAAALAFQLANLNEKVGPRLTHDQIEQTMRDTNSVELFKAFGLWDDWQSGKRGRQ
Ga0307474_104012061	3300031718	Hardwood Forest Soil	VLSFGLANLPQKIGARLTHEQIEQTILESHSDEMFKAFGLWDDWVSGKRGRQK
Ga0307477_106632492	3300031753	Hardwood Forest Soil	SVELANLPQKIGPRLTHDQIEQTMRDTNSVEMFKAFGIWDDWVSGQRGRQK
Ga0307478_115427342	3300031823	Hardwood Forest Soil	SFELAGLPERIGPRLTHAQIEQTIDDSHSAEMLKAAGVWDDWISGKRGRQK
Ga0310917_103095691	3300031833	Soil	LPQLSKHVAATAVLSFGLANLKEKIGPRLTHDQIEKTIEESHSEALFKTLGLWDDWTTGKRGRQK
Ga0318511_104397522	3300031845	Soil	DKVDLPQLSKHVAATAVLSFGLANLKEKIGPRLTHDQIEKTIEESHSEALFKTLGLWDDWTTGKRGRQK
Ga0306925_109720583	3300031890	Soil	LTKHVAETAVLSFGLANLKEKIGPRLTHDQIEQTIEESHSEALFKTLGLWDDWTTGKRGRQK
Ga0308175_1003453883	3300031938	Soil	DFNQLKNHVAEAALFALELANLDQKIGPRLTHDQIERTMRESKSVEMMKANGIWDDWVSGKRGRQK
Ga0306926_125000871	3300031954	Soil	EAAALSFELANLNEKIGPRLAREQIEQTIRDTNSVQMFKDFGLWDEWQAGKRGRQK
Ga0311301_106356313	3300032160	Peatlands Soil	YDKVDFAQLKKNVAEAAALSFGLANLYAKIGPRLTHDQIEQTMRDSNSLDMLKADGVWDEWVSGARGREK
Ga0307471_1020051121	3300032180	Hardwood Forest Soil	FPQLKKHVAEAAALSFELANLYEKVGPRLTHDQIEQTMRDSNSVGVFKAFGLWDDWQSGKRGRQK
Ga0335078_126417671	3300032805	Soil	VAEAAVLAVGLANLPEKIGPRLTHDQIEQTMKDTNSIEMMKADGRWDDWVSGKRGRQK
Ga0335081_101452324	3300032892	Soil	IELANLPQRLGSRLTHDQIEQTMRDTNSLELFKAFGLWDDWVNGRRGRQK
Ga0335074_104268933	3300032895	Soil	LKKHVAEAAALSIGLADLPQKIGPRLSRAEIDRSIRESNSVEMFKAFGLWDEWTSGQRGREK
Ga0335077_115522282	3300033158	Soil	LANLPQKVGPRLTHDQIEQTMRDTNSVDMLKANGIWDDWVSGKRGRAK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092249

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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