Metagenome / Metatranscriptome Family F092268

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F092268
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	93 residues
Representative Sequence	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Number of Associated Samples	90
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.15 %
% of genes near scaffold ends (potentially truncated)	49.53 %
% of genes from short scaffolds (< 2000 bps)	81.31 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (89.720 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.168 % of family members)
Environment Ontology (ENVO)	Unclassified (40.187 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.45% β-sheet: 20.17% Coil/Unstructured: 45.38%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12867	DinB_2	27.10
PF13545	HTH_Crp_2	14.02
PF00005	ABC_tran	10.28
PF01464	SLT	7.48
PF12848	ABC_tran_Xtn	3.74
PF00072	Response_reg	1.87
PF00523	Fusion_gly	0.93
PF08448	PAS_4	0.93
PF06863	DUF1254	0.93
PF01339	CheB_methylest	0.93
PF07635	PSCyt1	0.93
PF01739	CheR	0.93
PF02518	HATPase_c	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.87
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.87
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.93
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.72 %
Unclassified	root	N/A	10.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.72 %
Unclassified	root	N/A	10.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.72 %
Unclassified	root	N/A	10.28 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	13.08 %
Unclassified	root	N/A	10.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	29.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11.21 %
Unclassified	root	N/A	10.28 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	4.67 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.21 %
Unclassified	root	N/A	10.28 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	4.67 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.87 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.91 %
Bifidobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales	11.21 %
Unclassified	root	N/A	10.28 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	4.67 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	1.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.91 %
Bifidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae	11.21 %
Unclassified	root	N/A	10.28 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	4.67 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	1.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.91 %
Bifidobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium	11.21 %
Unclassified	root	N/A	10.28 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4.67 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	1.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.91 %
Bifidobacterium pullorum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	11.21 %
Unclassified	root	N/A	10.28 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4.67 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	1.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_107205885	Not Available	551	Open in IMG/M
3300000891\|JGI10214J12806_11128897	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300000956\|JGI10216J12902_106776329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1345	Open in IMG/M
3300000956\|JGI10216J12902_109180219	All Organisms → cellular organisms → Bacteria → Proteobacteria	2691	Open in IMG/M
3300004114\|Ga0062593_100015077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3834	Open in IMG/M
3300004480\|Ga0062592_100147046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1570	Open in IMG/M
3300005093\|Ga0062594_100452961	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300005288\|Ga0065714_10095328	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300005290\|Ga0065712_10019584	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300005335\|Ga0070666_10418391	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005353\|Ga0070669_100101020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2176	Open in IMG/M
3300005354\|Ga0070675_100023296	All Organisms → cellular organisms → Bacteria	4949	Open in IMG/M
3300005354\|Ga0070675_100333592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1342	Open in IMG/M
3300005356\|Ga0070674_100010107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	5686	Open in IMG/M
3300005364\|Ga0070673_100189503	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300005466\|Ga0070685_11272020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	561	Open in IMG/M
3300005544\|Ga0070686_101161495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	640	Open in IMG/M
3300005548\|Ga0070665_101227032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300005618\|Ga0068864_100956241	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005719\|Ga0068861_100984723	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005841\|Ga0068863_102682080	Not Available	507	Open in IMG/M
3300006237\|Ga0097621_100431579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300006845\|Ga0075421_100326232	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300006846\|Ga0075430_100467128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300006865\|Ga0073934_10004352	All Organisms → cellular organisms → Bacteria	23793	Open in IMG/M
3300007004\|Ga0079218_12614721	Not Available	600	Open in IMG/M
3300009094\|Ga0111539_10465426	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300009156\|Ga0111538_11519803	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300009162\|Ga0075423_10917145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300009177\|Ga0105248_11366884	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300009610\|Ga0105340_1098549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300009678\|Ga0105252_10069726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
3300011333\|Ga0127502_10215385	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300012232\|Ga0137435_1181141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	648	Open in IMG/M
3300012884\|Ga0157300_1112212	Not Available	517	Open in IMG/M
3300012895\|Ga0157309_10352305	Not Available	512	Open in IMG/M
3300012905\|Ga0157296_10051673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300012905\|Ga0157296_10069795	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300012911\|Ga0157301_10013702	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300012912\|Ga0157306_10477201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	506	Open in IMG/M
3300012913\|Ga0157298_10009454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1582	Open in IMG/M
3300012943\|Ga0164241_10677782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300013096\|Ga0157307_1085529	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300014326\|Ga0157380_10114877	All Organisms → cellular organisms → Bacteria	2269	Open in IMG/M
3300014326\|Ga0157380_10200333	All Organisms → cellular organisms → Bacteria → Acidobacteria	1771	Open in IMG/M
3300014745\|Ga0157377_10062867	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300015374\|Ga0132255_102350764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300017792\|Ga0163161_10602984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300017965\|Ga0190266_10052431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1451	Open in IMG/M
3300018067\|Ga0184611_1007980	All Organisms → cellular organisms → Bacteria	2901	Open in IMG/M
3300018073\|Ga0184624_10392972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300018083\|Ga0184628_10080672	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300018469\|Ga0190270_10378901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1300	Open in IMG/M
3300018476\|Ga0190274_10042758	All Organisms → cellular organisms → Bacteria	3211	Open in IMG/M
3300018476\|Ga0190274_12257076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300018476\|Ga0190274_12702148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	593	Open in IMG/M
3300019356\|Ga0173481_10023746	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1894	Open in IMG/M
3300019356\|Ga0173481_10072877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1248	Open in IMG/M
3300019361\|Ga0173482_10181143	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300019361\|Ga0173482_10577323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	561	Open in IMG/M
3300021082\|Ga0210380_10345408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	679	Open in IMG/M
3300025310\|Ga0209172_10023935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4274	Open in IMG/M
3300025893\|Ga0207682_10010447	All Organisms → cellular organisms → Bacteria → Acidobacteria	3639	Open in IMG/M
3300025908\|Ga0207643_10008076	All Organisms → cellular organisms → Bacteria → Proteobacteria	5645	Open in IMG/M
3300025925\|Ga0207650_10478264	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300025925\|Ga0207650_11322013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	613	Open in IMG/M
3300025926\|Ga0207659_11261510	Not Available	635	Open in IMG/M
3300025932\|Ga0207690_11224464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	627	Open in IMG/M
3300025933\|Ga0207706_10121719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2295	Open in IMG/M
3300025933\|Ga0207706_10432925	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300025933\|Ga0207706_10710437	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300025938\|Ga0207704_11076427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300025941\|Ga0207711_10945297	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300025942\|Ga0207689_10972254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300026075\|Ga0207708_11101064	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300026075\|Ga0207708_11182762	Not Available	668	Open in IMG/M
3300026095\|Ga0207676_11166768	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300026116\|Ga0207674_10863630	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300027909\|Ga0209382_10425499	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300028592\|Ga0247822_10293148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242	Open in IMG/M
3300031170\|Ga0307498_10144842	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031198\|Ga0307500_10264363	Not Available	535	Open in IMG/M
3300031226\|Ga0307497_10651458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300031538\|Ga0310888_10781583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300031547\|Ga0310887_10105642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1404	Open in IMG/M
3300031562\|Ga0310886_10114532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1366	Open in IMG/M
3300031716\|Ga0310813_10980735	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300031740\|Ga0307468_100078584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1869	Open in IMG/M
3300031847\|Ga0310907_10601785	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031847\|Ga0310907_10661919	Not Available	574	Open in IMG/M
3300031854\|Ga0310904_11077622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	575	Open in IMG/M
3300031858\|Ga0310892_10308971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300031908\|Ga0310900_11637763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	545	Open in IMG/M
3300031913\|Ga0310891_10044547	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300031943\|Ga0310885_10152270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1107	Open in IMG/M
3300032000\|Ga0310903_10680050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300032012\|Ga0310902_10871672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300032017\|Ga0310899_10464278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300032075\|Ga0310890_10066574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2129	Open in IMG/M
3300032122\|Ga0310895_10021157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2105	Open in IMG/M
3300032144\|Ga0315910_10566987	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300032144\|Ga0315910_10772235	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300032144\|Ga0315910_11134778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium pullorum	610	Open in IMG/M
3300032144\|Ga0315910_11597993	Not Available	508	Open in IMG/M
3300032157\|Ga0315912_10013746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	6792	Open in IMG/M
3300032157\|Ga0315912_10073579	All Organisms → cellular organisms → Bacteria	2684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.55%
Host-Associated	Host-Associated	36.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.27%
Plants	Host-Associated → Plants	36.45%
Aquatic	Environmental → Aquatic	10.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.21%
Sediment	Environmental → Aquatic → Sediment	6.54%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.87%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.54%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	14.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.28%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	14.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.80%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1072058852	3300000559	Soil	MADLDATNVMRIAREVTLEQSXXXXXXXXXXAGGGGDYVELLINIDGCPSEPCQFAIGAFRGGSETELRDEIGERLRTYLDHYRSVHMRRTA*
JGI10214J12806_111288972	3300000891	Soil	MGLGIAVALFRAMADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDRLRQYLDDYRFVHM*
JGI10216J12902_1067763291	3300000956	Soil	MADLDATNVMRIAREVTLEQSLPLKVAGVVFAGGGGDYVELLINIDGCPCEPCQFAIGAFRGASETELRDEIGERLRTYLDHYRSVHMRRTA*
JGI10216J12902_1091802192	3300000956	Soil	MIDLDATNIVRIAREVTLEQSLPLKVAGVVFAGGGGDYVEILINIDGCPCEPCQFTIGAFRGGSEVDLRDEIGARLRQYLDGYRSVQMRRTA*
Ga0062593_1000150771	3300004114	Soil	MIDLDATNIMRIAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSVHMRRTA*
Ga0062592_1001470462	3300004480	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYLDDHHSILMRRTA*
Ga0062594_1004529612	3300005093	Soil	MADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDRLRQYLDDYRFVHM*
Ga0065714_100953282	3300005288	Miscanthus Rhizosphere	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0065712_100195841	3300005290	Miscanthus Rhizosphere	RAALSFSFVNLAQWPRSRLSERTRPNAFERTSTGDGHTRCNFSVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0070666_104183912	3300005335	Switchgrass Rhizosphere	MRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0070669_1001010204	3300005353	Switchgrass Rhizosphere	MADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDRLRQYLDDYRF
Ga0070675_1000232961	3300005354	Miscanthus Rhizosphere	QWPRSRLSERTRPIAFERNSTGDGHTSCSFPVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0070675_1003335922	3300005354	Miscanthus Rhizosphere	MGLGTAVALFRAMADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDRLRQYLDDYRFVHM*
Ga0070674_1000101071	3300005356	Miscanthus Rhizosphere	LSERTRPNAFERTSTGDGHTRCNFSVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0070673_1001895033	3300005364	Switchgrass Rhizosphere	FSVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0070685_112720201	3300005466	Switchgrass Rhizosphere	EHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0070686_1011614952	3300005544	Switchgrass Rhizosphere	IAFERNSTGDGHTSCSFPVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0070665_1012270322	3300005548	Switchgrass Rhizosphere	MIDLDATNIMRIAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSV
Ga0068864_1009562411	3300005618	Switchgrass Rhizosphere	RNSTGDGHTRCRPPVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0068861_1009847231	3300005719	Switchgrass Rhizosphere	AMADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDRLRQYLDDYRFVHM*
Ga0068863_1026820801	3300005841	Switchgrass Rhizosphere	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQLAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0097621_1004315793	3300006237	Miscanthus Rhizosphere	MAHWDATNVMRIARETTLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0075421_1003262322	3300006845	Populus Rhizosphere	MADLDATNVMRIAREATLEQSLPLKVAGIVLAGGSDYIEILINIDGCPCEPCQFAIGAFRDGSEVALRDAIGEHLRRYLDEYRSVLRRRIA*
Ga0075430_1004671281	3300006846	Populus Rhizosphere	MADLDATNVMRIAREATLEQSLPLKVAGIVLAGGSDYIEILINIDGCPCEPCQFAIGAFRDGSEVALRDAIGEHLRRYLDEYR
Ga0073934_1000435216	3300006865	Hot Spring Sediment	MADFDVSSLMRIAREVTLEHSLPLKVAGVVFSGGGDYVEILINIDGCKSDPCQFAIGAFRDASEDELRDEIAFQLRRALEDHRALYAPIERRSTSQISAAS*
Ga0079218_126147211	3300007004	Agricultural Soil	MADFDVSSLMRIAREVTLEQSLPLKVAGVVFSGGGDYVEILINIDGCKSDPCQFAIGAFRDASEDELRDEIAFQLRRALEDHRALYAPVDRSSTSQISAAS*
Ga0111539_104654263	3300009094	Populus Rhizosphere	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVTLRDEIGERLRQYLDDHHSILMRRTA*
Ga0111538_115198032	3300009156	Populus Rhizosphere	MRIARAATLEQSLPLKVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGTFRDGSEVALRDEIGDRLRQYLDDYRSVHM*
Ga0075423_109171451	3300009162	Populus Rhizosphere	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAVGAFRDGSEVALRDEIGKRLRQYL
Ga0105248_113668841	3300009177	Switchgrass Rhizosphere	PNAFERTSTGDGHTRCNFSVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0105340_10985493	3300009610	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFATGAFRDGSEVALRDEIGRRLRQYLDDHHSIHMRRTA*
Ga0105252_100697262	3300009678	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSSEVDLRDQIGERLRKYLDDHHSLHMRRTA*
Ga0127502_102153852	3300011333	Soil	VSSLMRIAREVTLEQSLPLKVAGVVFSGGGDYVEILINIDGCKSDPCQFAIGAFRDASEDELRDEIAFQLRRALEDHRALYAPVDRSSTSQISAAS*
Ga0137457_13414881	3300011443	Soil	QSLPVRVVIVVLAGGGSDYVEILINIDGCPCEPCQFAIGAFRDGSSEVDLRDQIGERLRKYLDDHHSLHMRRTA*
Ga0137435_11811411	3300012232	Soil	RNSTGHGHTRCNLPVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLEDHHSILMRRTA*
Ga0157300_11122121	3300012884	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAVGAFRDGSEVALRDEIGKRLRQYLDDHHSIRMRRTA*
Ga0157309_103523052	3300012895	Soil	SPSNATRPAMGTPVASYQSWHHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYLDDHHSILMRRTA*
Ga0157296_100516731	3300012905	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQ
Ga0157296_100697952	3300012905	Soil	RIAREATLEHSLPVQVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0157301_100137022	3300012911	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSIRMRRTA*
Ga0157306_104772012	3300012912	Soil	RIAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSVHMRRTA*
Ga0157298_100094543	3300012913	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMGRTA*
Ga0164241_106777822	3300012943	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRGGSESALRDEIGKRLRRYIND
Ga0157307_10855292	3300013096	Soil	ATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0157380_101148773	3300014326	Switchgrass Rhizosphere	LSFSFVKYAMTRSRLSERTRPIAFERNSTGDGHTSCSFPVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0157380_102003331	3300014326	Switchgrass Rhizosphere	ATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIVDRLRQYLDDYRFVHM*
Ga0157377_100628673	3300014745	Miscanthus Rhizosphere	VSGQAHHIERNSTGDGHTSCSFPVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA*
Ga0132255_1023507641	3300015374	Arabidopsis Rhizosphere	MADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGTFRDGSEVALRDEIGDRLRQYLDDYRFVHM*
Ga0163161_106029841	3300017792	Switchgrass Rhizosphere	MADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDR
Ga0190266_100524312	3300017965	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSSEVALRDQIGERLRKYLDDHHSIHMRRSA
Ga0184611_10079803	3300018067	Groundwater Sediment	MAHWDATNIMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0184624_103929722	3300018073	Groundwater Sediment	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMR
Ga0184628_100806722	3300018083	Groundwater Sediment	MMDLDATNIVRIAREVTLEQSLPLKVAGVVFAGGGGDYVEILINIDGCPSEPCQFAIGAFRGGSEDELRDEIGEGLRKYLDSYRAVHMRRTA
Ga0190270_103789012	3300018469	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSSEVDLRDQIGERLRKYLDDHHSLHMRRTA
Ga0190274_100427581	3300018476	Soil	MADLDASNVMRIAQEVTLEQSLPLKVAGVVFAGGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDQIGERLRHYLDDYRSVHMPRTA
Ga0190274_122570761	3300018476	Soil	MADLDATNVMRIAREVTLEQSLPLKVAGVVFAGGGGDYVELLINIDGCPCEPCQFAIGAFRGGSETELRDEIGERLRTYLDHYRSVHMRRTA
Ga0190274_127021482	3300018476	Soil	REATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0173481_100237461	3300019356	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0173481_100728771	3300019356	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAVGAFRDGSEVALRDEIGKRLRQYLDDHHSIRMRRTA
Ga0173482_101811431	3300019361	Soil	FSVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0173482_105773232	3300019361	Soil	IAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSVHMRRTA
Ga0210380_103454081	3300021082	Groundwater Sediment	RNSTGDGHTRCRPPVMAHWDATNIMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSSEVDLRDQIGERLRKYLDDHHSLHMRRTA
Ga0209172_100239353	3300025310	Hot Spring Sediment	MADFDVSSLMRIAREVTLEHSLPLKVAGVVFSGGGDYVEILINIDGCKSDPCQFAIGAFRDASEDELRDEIAFQLRRALEDHRALYAPIERRSTSQISAAS
Ga0207682_100104472	3300025893	Miscanthus Rhizosphere	MADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDRLRQYLDDYRFVHM
Ga0207643_100080764	3300025908	Miscanthus Rhizosphere	MIDLDATNIMRIAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSVHMRRTA
Ga0207650_104782641	3300025925	Switchgrass Rhizosphere	RCSFSVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0207650_113220131	3300025925	Switchgrass Rhizosphere	RLHHPAVMIDLDATNIMRIAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSVHMRRTA
Ga0207659_112615102	3300025926	Miscanthus Rhizosphere	MGLGTAVALFRAMADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDRLRQYLDDYRFVHM
Ga0207690_112244641	3300025932	Corn Rhizosphere	LRELVQWPRSRLSERTRPIAFERNSTGDGHTSCSFPVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0207706_101217191	3300025933	Corn Rhizosphere	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMSRTA
Ga0207706_104329253	3300025933	Corn Rhizosphere	MADLDATNVMRIARAATLEQSLPLKVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDRLRQYLDDYRFVHM
Ga0207706_107104371	3300025933	Corn Rhizosphere	IDLDATNIMRIAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSVHMRRTA
Ga0207704_110764272	3300025938	Miscanthus Rhizosphere	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDRSEVALRDEISERLRRYLDDYRAVHMRRTA
Ga0207711_109452971	3300025941	Switchgrass Rhizosphere	PNAFERTSTGDGHTRCNFSVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0207689_109722541	3300025942	Miscanthus Rhizosphere	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHS
Ga0207708_111010642	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0207708_111827622	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGLGTAVALFRAMADFDATNVMRIAQEATLEQSLPLRVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRDGSEVALRDEIGDRLRQYLDDRRSVHMRRTA
Ga0207676_111667682	3300026095	Switchgrass Rhizosphere	MRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0207674_108636302	3300026116	Corn Rhizosphere	MADLDATNVMRIAREVTLEQSLPLKVAGVVFAGGGGDYVELLINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSVHMRRTA
Ga0209382_104254992	3300027909	Populus Rhizosphere	MADLDATNVMRIAREATLEQSLPLKVAGIVLAGGSDYIEILINIDGCPCEPCQFAIGAFRDGSEVALRDAIGEHLRRYLDEYRSVLRRRIA
Ga0247822_102931483	3300028592	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRR
Ga0307498_101448422	3300031170	Soil	LGCSNVMRIARAATLEQSLPLKVAGVVLAGGSDYVELLINIDDCPCEPCQFAIGAFRNGSEVALRDEIGERLRQYLDDRRSVHMRRTA
Ga0307500_102643631	3300031198	Soil	RSQRDNIWCWRFESQRVHQLQNPRVMVDFDATNVMRIAREVTLEQSLPLKVAGVVFAGGGGDYIEILINIDGCPCEPCQFTIGAFRTGSEVALRDEIGERLRHYLDGYRSVHMRRTA
Ga0307497_106514581	3300031226	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVELRDEIGERLRQYLDDHHSILMRRTA
Ga0310888_107815831	3300031538	Soil	MIDLDATNIMRIAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGER
Ga0310887_101056422	3300031547	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYLDDHHSIHMRRTA
Ga0310886_101145322	3300031562	Soil	MAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYLDDHHSILMRRTA
Ga0310813_109807351	3300031716	Soil	LPCSLVVQLRELAQWPRSRLSERTRPLAFERNSTGDGHTRCRPPVMAHWDATNIMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAVGAFRDGSEVALRDEIGKRLRQYLDDHHSIRMRRTA
Ga0307468_1000785841	3300031740	Hardwood Forest Soil	ATNVMRIARDATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDRSEVALRDEISERLRQYLDGYRAVHMRRTA
Ga0310907_106017851	3300031847	Soil	EHSLPVQVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYLDDHHSIHMRRTA
Ga0310907_106619192	3300031847	Soil	LVQWPRSRLSERTRPIAFERNSTGDGHTSCSFPVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0310904_110776221	3300031854	Soil	VHRLHHPAVMIDLDATNIMRIAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSVHMRRTA
Ga0310892_103089712	3300031858	Soil	MAHWDATNVMRIAREATLEHSLPVQVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYLDDHHSIHMRRTA
Ga0310900_116377631	3300031908	Soil	MRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYLDDHHSILMRRTA
Ga0310891_100445472	3300031913	Soil	MAHWDATNVMRIAREATLEHSLPVQVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0310885_101522701	3300031943	Soil	DATNVMRIAREATLEHSLPVQVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYLDDHHSIHMRRTA
Ga0310903_106800501	3300032000	Soil	MAHWDATNVMRIARDATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYLDDHHSILMRRTA
Ga0310902_108716722	3300032012	Soil	MIDLDATNIMRIAREVTLEQSLPLKVAGVVRAGGGDYIEILINIDGCPCEPCQFAVGAFRNGSEVEFRDQVGERLRHYLDGYRSVHM
Ga0310899_104642782	3300032017	Soil	MAHWDATNVMRIAREATLEHSLPVQVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGKRLRQYL
Ga0310890_100665741	3300032075	Soil	ATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIGERLRQYLDDHHSILMRRTA
Ga0310895_100211573	3300032122	Soil	PSKRNSTGDGHTSCSFSVMAHWDATNVMRIAREATLEHSLPVKVAGVVFAGGSDYVEILINIDGCPCEPCQFAIGAFRDGSEVTLRDEIGERLRQYLDDHHSILMRRTA
Ga0315910_105669872	3300032144	Soil	MADLDATNVMRIAREATLEQSLPLKVAGVVFAGGGGDYVEILINIDGCPSEPCQFSIGAFRNSSEVALRDEIAEHLRRYLDEYRSFHARTA
Ga0315910_107722352	3300032144	Soil	MVDLDASNVMRIAREATLEQSLPLKVAGVVFTGGGSDYVEILINIDGCPCEPCQFAIGAFRDRSEVALRDEISERLRQYLDDYRSVHMRRTA
Ga0315910_111347782	3300032144	Soil	PVAKSTVMADLDATNVMRIAREVTLEQSLPLKVAGVVFAGGGGDYVEILINIDGCPCEPCQFAIGAFRTGSEVELRDEIGERLREYLDGYRAVHMRRTA
Ga0315910_115979932	3300032144	Soil	MADLDATNVMRIAREATLEQSLPLKVAGVVFAGGGGDYVEILITIDGCPSEPCRFSIGTFRHGSEAELRDEIGERLRRYYDAYRTFHARRTA
Ga0315912_100137462	3300032157	Soil	MADLDASNIMRIAREATLEQTLPLKVAGVVCTGGDYIEILINIDGCPCEPCQFAIGAFRDGSEVALRDEIAERLRQYLDGYRSVHMRRTA
Ga0315912_100735793	3300032157	Soil	MADLDATNVMRIAREVTLEQSLPLKVAGVVFAGGGGDYVEILINIDGCPCEPCQFAIGAFRGGSESALRDEIGDRLRRYIENYRSVHMRRTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092268

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences