Metagenome Family F092382

Basic Information
Family ID	F092382
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	41 residues
Representative Sequence	EKGIDASRISTRVGTASTEKGSEKENRRVDFVFVPEGATY
Number of Associated Samples	97
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.87 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	91.59 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Most Common Taxonomy
Group	Bacteria (52.336 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.234 % of family members)
Environment Ontology (ENVO)	Unclassified (31.776 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.206 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.29% β-sheet: 0.00% Coil/Unstructured: 89.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00072	Response_reg	7.48
PF00158	Sigma54_activat	6.54
PF13570	PQQ_3	5.61
PF02012	BNR	2.80
PF14870	PSII_BNR	1.87
PF02954	HTH_8	1.87
PF01797	Y1_Tnp	1.87
PF08241	Methyltransf_11	0.93
PF00889	EF_TS	0.93
PF14559	TPR_19	0.93
PF15902	Sortilin-Vps10	0.93
PF02518	HATPase_c	0.93
PF01590	GAF	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.87
COG0264	Translation elongation factor EF-Ts	Translation, ribosomal structure and biogenesis [J]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	47.66 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.30 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001137\|JGI12637J13337_1000751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2459	Open in IMG/M
3300004080\|Ga0062385_10309892	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300004091\|Ga0062387_101652828	Not Available	519	Open in IMG/M
3300004092\|Ga0062389_103966208	Not Available	556	Open in IMG/M
3300004635\|Ga0062388_102413591	Not Available	550	Open in IMG/M
3300005148\|Ga0066819_1013250	Not Available	620	Open in IMG/M
3300005436\|Ga0070713_101031038	Not Available	794	Open in IMG/M
3300005534\|Ga0070735_10016850	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5373	Open in IMG/M
3300005561\|Ga0066699_10635895	Not Available	766	Open in IMG/M
3300005591\|Ga0070761_10807616	Not Available	590	Open in IMG/M
3300005602\|Ga0070762_10092778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1735	Open in IMG/M
3300005712\|Ga0070764_10360263	Not Available	851	Open in IMG/M
3300005952\|Ga0080026_10123542	Not Available	735	Open in IMG/M
3300006176\|Ga0070765_102017477	Not Available	539	Open in IMG/M
3300006354\|Ga0075021_10546623	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300006358\|Ga0068871_101042291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300006358\|Ga0068871_101607189	Not Available	615	Open in IMG/M
3300007265\|Ga0099794_10601496	Not Available	582	Open in IMG/M
3300009088\|Ga0099830_10286859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1311	Open in IMG/M
3300009545\|Ga0105237_10921815	Not Available	881	Open in IMG/M
3300009553\|Ga0105249_11108348	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300009615\|Ga0116103_1125123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300009635\|Ga0116117_1192002	Not Available	537	Open in IMG/M
3300009764\|Ga0116134_1038282	All Organisms → cellular organisms → Bacteria → Acidobacteria	1872	Open in IMG/M
3300009792\|Ga0126374_10250172	Not Available	1157	Open in IMG/M
3300010046\|Ga0126384_11083874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300010047\|Ga0126382_12327578	Not Available	518	Open in IMG/M
3300010343\|Ga0074044_10259084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300010343\|Ga0074044_10578414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300010359\|Ga0126376_12437387	Not Available	570	Open in IMG/M
3300010376\|Ga0126381_100384015	All Organisms → cellular organisms → Bacteria → Acidobacteria	1951	Open in IMG/M
3300010376\|Ga0126381_102396661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300010376\|Ga0126381_104804311	Not Available	519	Open in IMG/M
3300012096\|Ga0137389_10806100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300012189\|Ga0137388_10474646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300012202\|Ga0137363_11438091	Not Available	580	Open in IMG/M
3300012211\|Ga0137377_11212850	Not Available	684	Open in IMG/M
3300012349\|Ga0137387_10942413	Not Available	622	Open in IMG/M
3300012361\|Ga0137360_10991135	Not Available	725	Open in IMG/M
3300012918\|Ga0137396_10824738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012923\|Ga0137359_10618235	Not Available	949	Open in IMG/M
3300013308\|Ga0157375_11465177	Not Available	805	Open in IMG/M
3300014201\|Ga0181537_10482762	Not Available	848	Open in IMG/M
3300015373\|Ga0132257_104634486	Not Available	500	Open in IMG/M
3300016387\|Ga0182040_11127781	Not Available	658	Open in IMG/M
3300016422\|Ga0182039_11066123	Not Available	727	Open in IMG/M
3300017974\|Ga0187777_10087836	All Organisms → cellular organisms → Bacteria → Acidobacteria	2030	Open in IMG/M
3300017995\|Ga0187816_10576767	Not Available	506	Open in IMG/M
3300018006\|Ga0187804_10079997	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300018038\|Ga0187855_10787942	Not Available	554	Open in IMG/M
3300018482\|Ga0066669_10326618	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M
3300019788\|Ga0182028_1091647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300020579\|Ga0210407_10775713	Not Available	740	Open in IMG/M
3300020581\|Ga0210399_10321742	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300020581\|Ga0210399_10528690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300021168\|Ga0210406_10656293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300021178\|Ga0210408_10569960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300021401\|Ga0210393_10010540	All Organisms → cellular organisms → Bacteria → Acidobacteria	7192	Open in IMG/M
3300021405\|Ga0210387_10372512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300021420\|Ga0210394_10997228	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300021432\|Ga0210384_11830776	Not Available	513	Open in IMG/M
3300021475\|Ga0210392_10190051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1427	Open in IMG/M
3300021475\|Ga0210392_10653548	Not Available	781	Open in IMG/M
3300021477\|Ga0210398_10386854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300021478\|Ga0210402_10815341	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300021559\|Ga0210409_10012298	All Organisms → cellular organisms → Bacteria	8547	Open in IMG/M
3300021559\|Ga0210409_10450631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300021559\|Ga0210409_11510068	Not Available	548	Open in IMG/M
3300024179\|Ga0247695_1011011	All Organisms → cellular organisms → Bacteria → Acidobacteria	1274	Open in IMG/M
3300024182\|Ga0247669_1026908	Not Available	975	Open in IMG/M
3300025914\|Ga0207671_10605080	Not Available	873	Open in IMG/M
3300025916\|Ga0207663_10492191	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300025961\|Ga0207712_12050817	Not Available	512	Open in IMG/M
3300026839\|Ga0207764_115846	Not Available	687	Open in IMG/M
3300027288\|Ga0208525_1020668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300027605\|Ga0209329_1122502	Not Available	572	Open in IMG/M
3300027645\|Ga0209117_1083200	Not Available	893	Open in IMG/M
3300027795\|Ga0209139_10356798	Not Available	511	Open in IMG/M
3300027857\|Ga0209166_10504959	Not Available	621	Open in IMG/M
3300027894\|Ga0209068_10512877	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300027908\|Ga0209006_10640048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300027986\|Ga0209168_10052929	All Organisms → cellular organisms → Bacteria → Acidobacteria	2166	Open in IMG/M
3300028536\|Ga0137415_11039671	Not Available	631	Open in IMG/M
3300028759\|Ga0302224_10162677	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300028906\|Ga0308309_11557295	Not Available	563	Open in IMG/M
3300031057\|Ga0170834_102466482	Not Available	576	Open in IMG/M
3300031545\|Ga0318541_10702324	Not Available	565	Open in IMG/M
3300031546\|Ga0318538_10372737	Not Available	771	Open in IMG/M
3300031573\|Ga0310915_10581398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300031682\|Ga0318560_10062688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1859	Open in IMG/M
3300031771\|Ga0318546_10652130	Not Available	741	Open in IMG/M
3300031879\|Ga0306919_10424291	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300031912\|Ga0306921_11514139	Not Available	733	Open in IMG/M
3300031912\|Ga0306921_12343440	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300031942\|Ga0310916_10831973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300032042\|Ga0318545_10020550	All Organisms → cellular organisms → Bacteria → Acidobacteria	2097	Open in IMG/M
3300032091\|Ga0318577_10108288	All Organisms → cellular organisms → Bacteria → Acidobacteria	1305	Open in IMG/M
3300032174\|Ga0307470_10143045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300032180\|Ga0307471_100073197	All Organisms → cellular organisms → Bacteria → Acidobacteria	2968	Open in IMG/M
3300032180\|Ga0307471_104243983	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300032770\|Ga0335085_10687714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1139	Open in IMG/M
3300032782\|Ga0335082_10714851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300032897\|Ga0335071_11971574	Not Available	527	Open in IMG/M
3300032955\|Ga0335076_11359349	Not Available	596	Open in IMG/M
3300033158\|Ga0335077_10090448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3612	Open in IMG/M
3300033289\|Ga0310914_10612362	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300033983\|Ga0371488_0131414	All Organisms → cellular organisms → Bacteria → Acidobacteria	1337	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.52%
Host-Associated	Host-Associated	7.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.44%
Aquatic	Environmental → Aquatic	13.08%
Plants	Host-Associated → Plants	7.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.57%
Freshwater	Environmental → Aquatic → Freshwater	11.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.67%
Sediment	Environmental → Aquatic → Sediment	1.87%
Peat	Environmental → Terrestrial → Peat	1.87%
Roots	Host-Associated → Plants → Roots	1.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.01%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12637J13337_10007513	3300001137	Forest Soil	LSRVSTRVGTASTEKGSEKANRRVDFIFVPEGANY*
Ga0062385_103098922	3300004080	Bog Forest Soil	AKKYLGEKGIDASRVSTRTGEAAAGPEKDNRRVDFIFVPEGATY*
Ga0062387_1016528281	3300004091	Bog Forest Soil	AKKYLGEKGIDASRISTRVGTASTEKGSEKDNRRVDFILVPEGATY*
Ga0062389_1039662082	3300004092	Bog Forest Soil	LGEKGIDASRSTTRTGQASTEKGTEKENRRVEFIFVPEGATY*
Ga0062388_1024135911	3300004635	Bog Forest Soil	ELAGKYLIEKGIDASRISTRVGEAKKDSEKDNRRVDFIFVPEGATF*
Ga0066819_10132502	3300005148	Soil	GEKGIDAARISTRVGEASKEKGQEKANRRVDFVIVPEGATY*
Ga0070713_1010310381	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	YIVEKGIDASRISTRTGTASTEKGSEKDNRRVEFVLVPEGATY*
Ga0070735_100168501	3300005534	Surface Soil	KGIDASRSTTRTGQASTEKGSEKENRRVEFIFVPEGATY*
Ga0066699_106358952	3300005561	Soil	LGEKGIDASRGTTRTGQASTEKGSEKENRRVEFIFVPEGATY*
Ga0070761_108076162	3300005591	Soil	YLGEKGIDASRIETRVGTASTEKGSEKDNRRVDFIFVPEGATY*
Ga0070762_100927782	3300005602	Soil	EKGIDASRSTTRTGQASTEKGSEKENRRVEFIFVPEGATY*
Ga0070764_103602631	3300005712	Soil	GEKGIDASRSTTRTGQASTEKGSEKENRRVEFIFVPEGATY*
Ga0080026_101235421	3300005952	Permafrost Soil	IDASRVTTRTGTASKEKGAEKENRRVDFTFVPEGATY*
Ga0070765_1020174771	3300006176	Soil	AYLGEKGIDASRSTTRTGQASTEKGSEKENRRVEFIFVPEGATY*
Ga0075021_105466231	3300006354	Watersheds	DLAKAFIIEKGIDASRISTRIAKGSADKAAEKDNRRVDFVMVPEGATY*
Ga0068871_1010422911	3300006358	Miscanthus Rhizosphere	KKYIVEKGVDASRISTRTGEASKEKGQEKANRRVDFVIVPEGATY*
Ga0068871_1016071892	3300006358	Miscanthus Rhizosphere	KGVDESRISTRVGEASAEKGQEKANRRVEFVVVPEGATY*
Ga0099794_106014962	3300007265	Vadose Zone Soil	ASRISTRVGTASTEKGSEKTNRRVDFIFVPEGATY*
Ga0099830_102868591	3300009088	Vadose Zone Soil	IDASRISTRAGTASTEKGADNRRVDFVIVPEGAAF*
Ga0105237_109218152	3300009545	Corn Rhizosphere	AYLGEKGIDASRGTTRVGQASTEKGSEKENRRVEFIFVPEGATY*
Ga0105249_111083481	3300009553	Switchgrass Rhizosphere	LAKKYIVEKGVDASRISTRTGEASKEKGQEKANRRVDFVIVPEGATY*
Ga0116103_11251232	3300009615	Peatland	GIDASRISTRAGTASTEKGMEKDNRRVDFIFVPEGATY*
Ga0116117_11920021	3300009635	Peatland	KGIDASRVSTRTGEAAAGPEKDNRRVDFIFVPEGATY*
Ga0116134_10382821	3300009764	Peatland	KKYLGEKGIDASRISTRAGTASTEKGMEKDNRRVDFVFVPEGAAY*
Ga0126374_102501721	3300009792	Tropical Forest Soil	IDAARISTRVGEASKEKGQEKANRRVDFVIVPEGATY*
Ga0126384_110838741	3300010046	Tropical Forest Soil	KAIDASRISTRTGQATGTGADNRRVDFVIVPEGATY*
Ga0126382_123275781	3300010047	Tropical Forest Soil	YIVEKGVDASRISTRTGEASKEKGQEKANRRVDFVVVPEGATY*
Ga0074044_102590841	3300010343	Bog Forest Soil	EKGIDASRISTRVGTASTEKGSEKENRRVDFVFVPEGATY*
Ga0074044_105784142	3300010343	Bog Forest Soil	ASRISTRAGKASTEKGSENANRRVDFVFVPEGATY*
Ga0126376_124373871	3300010359	Tropical Forest Soil	KYIVEKGVDASRISTRVGQASTEKGQEKANRRVDFVIVPEGATY*
Ga0126381_1003840151	3300010376	Tropical Forest Soil	KGIDASRISTRTGTASTEKGAEKENRRVEFIFVPEGATY*
Ga0126381_1023966611	3300010376	Tropical Forest Soil	AKKYLGEKGIDASRISTRVGSASREKGAAAENRRVDFIFVPEGATY*
Ga0126381_1048043112	3300010376	Tropical Forest Soil	IVEKGVDASRISTRVGEASKEKGQEKANRRVDFVVVPEGATY*
Ga0137389_108061002	3300012096	Vadose Zone Soil	DASRVSTRAGSASTEKGSEKANRRVDFVIVPEGATF*
Ga0137388_104746462	3300012189	Vadose Zone Soil	EKGIDASRVSTRAGSASTEKGSEKANRRVDFVIVPEGATF*
Ga0137363_114380911	3300012202	Vadose Zone Soil	KGVDASRISTRAGEASPEKGQEKANRRVDFVIVPEGATY*
Ga0137377_112128501	3300012211	Vadose Zone Soil	IVEKGVDASRIATRTGEASKEKDQEKANRRVDFVVVPEGATY*
Ga0137387_109424131	3300012349	Vadose Zone Soil	AKKYIVEKGVDASRISTRSGEASTEKGQEKANRRVDFVVVPEGATY*
Ga0137360_109911352	3300012361	Vadose Zone Soil	GEKEIDASRISTRVGTASAEKGMEKTNRRVDFIFVPEGANY*
Ga0137396_108247382	3300012918	Vadose Zone Soil	AKQFLGEKGIDASRITARTGEASKEKGSEKENRRIEMVFVPEGATY*
Ga0137359_106182352	3300012923	Vadose Zone Soil	DASRISTRTGEASKEKGQEKANRRVDFIVVPEGATY*
Ga0157375_114651771	3300013308	Miscanthus Rhizosphere	YIVEKGVDASRISTRTGEASKEKGQEKANRRVDFVIVPEGATY*
Ga0181537_104827622	3300014201	Bog	YLGEKGIDASRITTRTGQASTGKGTEKENRRVEFIFVPEGATY*
Ga0132257_1046344862	3300015373	Arabidopsis Rhizosphere	VDASRISTRTGEASKEKGQEKANRRVDFVIVPEGATY*
Ga0182040_111277811	3300016387	Soil	VDASRISTRVGEASTEKGQEKANRHVDFVIVPEGATY
Ga0182039_110661231	3300016422	Soil	KYMVEKGIDASRIETRVGTASTEKGSEKENRRVDFVFVPEGATY
Ga0187777_100878361	3300017974	Tropical Peatland	KGIDASRISTRVGTASTEKGSEKENRRVDFIFVPEGATY
Ga0187816_105767672	3300017995	Freshwater Sediment	ASRISTRVGTASTEKGSEKDNRRVDFIYVPEGASY
Ga0187804_100799973	3300018006	Freshwater Sediment	AKKYLGEKGIDASRISTRVGTASTEKGSEKENRRVDFIFVPEGATY
Ga0187855_107879421	3300018038	Peatland	AKKYLGEKGIDASRITTRTGTANAMKGMEKDNRRVDFVFVPEGATY
Ga0066669_103266181	3300018482	Grasslands Soil	YIVEKGVDASRISTRTGEASKEKGQEKANRRVDFIVVPEGATY
Ga0182028_10916471	3300019788	Fen	VPGGEKGIDASRISTRAGTASTEKGMEKDNRRVDFVFVPEGAAY
Ga0210407_107757131	3300020579	Soil	LIEKEAKAYLGENGIDASRISTRTGEAATEKGAEKVRRTPQEA
Ga0210399_103217422	3300020581	Soil	KYLAEKEIDLSRVSTRVGTASTEKGTEKENRRVDFIFVPEGANY
Ga0210399_105286901	3300020581	Soil	EKEIDLSRVSTRVGTASTEKGTEKENRRVDFIFVPEGANY
Ga0210406_106562932	3300021168	Soil	KYIVEKGVDASRISTRAGEASTEKGQEKANRRVDFVVVPEGATY
Ga0210408_105699602	3300021178	Soil	KKYIVEKGIDASRISTRTGTASTEKGSEKDNRRVEFVLVPEGATY
Ga0210393_100105401	3300021401	Soil	KGIDASRISTRTGTASTEKGSEKDNRRVEFVLVPEGATY
Ga0210387_103725122	3300021405	Soil	IDASRSTTRTGQASTEKGSEKENRRVEFIFVPEGATY
Ga0210394_109972282	3300021420	Soil	ARKFLGEKGIDASRITTRTGTAAKEKGAEKDNRRVEFIFVPEGATY
Ga0210384_118307761	3300021432	Soil	LIEKEAKAYLGEKGIDASRISTRTGEASTEKGAEKVNRRVEFVFVP
Ga0210392_101900512	3300021475	Soil	YLGEKGIDASRISTRTGEATAGAEKDNRRVDFIFVPEGATY
Ga0210392_106535482	3300021475	Soil	LAKKYLGEKGIDASRITTRTGTASTEKGMEKENRRVDFVIVPEGATF
Ga0210398_103868542	3300021477	Soil	DLAKAYLGEKGIDASRSTTRTGQASTEKGSEKENRRVEFIFVPEGATY
Ga0210402_108153411	3300021478	Soil	ELAKKYLGEKGIDASRISTRVGEASAEKGQEKENRRVDFVLVPEGATY
Ga0210409_100122989	3300021559	Soil	VEKGIDASRISTRTGTASTEKGSEKDNRRVEFVLVPEGATY
Ga0210409_104506311	3300021559	Soil	KFLGEKGIDASRITTRTGTASKEKGAEKENRRVEFIFVPEGATY
Ga0210409_115100681	3300021559	Soil	LSRVSSRVGTASTEKGMEKENRRVEFIFVPEGATY
Ga0247695_10110112	3300024179	Soil	LAKKYLGEKGIDAARISTRVGEASKEKGQEKANRRVDFVIVPEGATY
Ga0247669_10269081	3300024182	Soil	KGIDAARISTRVGEASTEKGQEKANRRVDFVIVPEGATY
Ga0207671_106050802	3300025914	Corn Rhizosphere	AYLGEKGIDASRGTTRVGQASTEKGSEKENRRVEFIFVPEGATY
Ga0207663_104921912	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GVDESRISTRVGEASAEKGQEKANRRVEFVVVPEGATY
Ga0207712_120508171	3300025961	Switchgrass Rhizosphere	LAKKYIVEKGVDASRISTRTGEASKEKGQEKANRRVDFVIVPEGATY
Ga0207764_1158462	3300026839	Tropical Forest Soil	IDASRISTRTGTASTEKGAEKENRRVEFIFVPEGATY
Ga0208525_10206681	3300027288	Soil	KGIDAARISTRVGEASKEKGQEKANRRVDFVIVPEGATY
Ga0209329_11225021	3300027605	Forest Soil	IDLSRVSTRVGTASTEKGTEKENRRVDFIFVPEGANY
Ga0209117_10832002	3300027645	Forest Soil	KGIDASRITTRTGTASKEKGAEKENRRVDFIFVPEGATY
Ga0209139_103567982	3300027795	Bog Forest Soil	KKYLIEKGIDASRISTRVGEATKGAEKDNRRVDFIFVPEGATY
Ga0209166_105049591	3300027857	Surface Soil	AKKYLGEKGIDAARISTRVGEASKEKGQEKANRRVDFVIVPEGATY
Ga0209068_105128772	3300027894	Watersheds	DLAKAFIIEKGIDASRISTRIAKGSADKAAEKDNRRVDFVMVPEGATY
Ga0209006_106400481	3300027908	Forest Soil	DASRITTRTGTASKEKGAEKENRRVEFIFVPEGATY
Ga0209168_100529292	3300027986	Surface Soil	KGIDASRSTTRTGQASTEKGSEKENRRVEFIFVPEGATY
Ga0137415_110396712	3300028536	Vadose Zone Soil	AYLGEKGIDASRSTTRTGQASTEKGAEKENRRVEFIFVPEGATY
Ga0302224_101626772	3300028759	Palsa	LGEKGIDASRVSTRTGEAAKGPEKENRRVDFIFVPEGATY
Ga0308309_115572951	3300028906	Soil	AYLGEKGIDASRSTTRTGQASTEKGSEKENRRVEFIFVPEGATY
Ga0170834_1024664821	3300031057	Forest Soil	EKGVDASRISTRSGEASTEKGQEKANRRVDFVVVPEGATY
Ga0318541_107023241	3300031545	Soil	EKGIDASRISTRAGTASTEKGAEKENRRVEFIFVPEGATY
Ga0318538_103727371	3300031546	Soil	DLAKKYMVEKGVDASRISTRTGEASTEKGQEKANRRVDFVIVPEGATY
Ga0310915_105813982	3300031573	Soil	KKYLVEKGIDASRMSTRTGTASTEKGAEKENRRVEFIFVPEGATY
Ga0318560_100626881	3300031682	Soil	YLIEKGIDASRISTRVGTASTEKGQEKANRRVEFIFVPEGATY
Ga0318546_106521301	3300031771	Soil	GIDASRISTRTGTASTEKGTEKENRRVEFIFVPEGATY
Ga0306919_104242912	3300031879	Soil	GIDASRIETRVGQASTEKGTEKENRRVEFIFVPEGATY
Ga0306921_115141391	3300031912	Soil	GVDASRISTRVGEASTEKGQEKANRHVDFVVVPEGATY
Ga0306921_123434401	3300031912	Soil	IVEKGVDASRISTRVGEASTEKGQEKANRHVDFVIVPEGATY
Ga0310916_108319731	3300031942	Soil	IEKGIDASRISTRTGTASTEKGAEKENRRVEFIFVPEGATY
Ga0318545_100205501	3300032042	Soil	EGAKKYLIEKGIDASRISTRTGTASTEKGTEKENRRVEFIFVPEGATY
Ga0318577_101082881	3300032091	Soil	IDASRISTRAGTASTEKGAEKENRRVEFIFVPEGATY
Ga0307470_101430451	3300032174	Hardwood Forest Soil	KEIDLSRVSTRVGTASTEKGSEKANRRVDFIFVPEGATY
Ga0307471_1000731973	3300032180	Hardwood Forest Soil	GEKNIDASRISTRVGQASGAAAENRRVDFVIVPEGATY
Ga0307471_1042439831	3300032180	Hardwood Forest Soil	VEKGVDASRISTRTGEASTEKGQEKANRRVDFVVVPEGATY
Ga0335085_106877142	3300032770	Soil	GIDAARISTRVGEASKEKGQEKANRRVDFVIVPEGATY
Ga0335082_107148512	3300032782	Soil	GEKGIDAARISTRVGEASKEKGQEKANRRVDFVIVPEGATY
Ga0335071_119715742	3300032897	Soil	IDASRISTRVGTASTEKGSEKENRRVDFIFVPEGATY
Ga0335076_113593492	3300032955	Soil	DGAKKYLGEKGIDASRISTRVGTASTERTAEAQKENRRVEFVFVPEGATY
Ga0335077_100904483	3300033158	Soil	VDESRISTRVGEASKEKGEEKANRRVDFVLVPQGATY
Ga0310914_106123622	3300033289	Soil	KYLVEKGIDASRISTRAGTASTEKGAEKENRRVEFIFVPEGATY
Ga0371488_0131414_1202_1330	3300033983	Peat Soil	LGEKGIDASRISTRVGTASTEKGMEKDNRRVDFVFVPEGATY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092382

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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