Metagenome Family F092384

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092384
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	44 residues
Representative Sequence	MDQRGYRGGLPRLPLLPLHDEQKKRLSEFLATLEPAAVRA
Number of Associated Samples	81
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	96.26 %
% of genes from short scaffolds (< 2000 bps)	91.59 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.065 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (46.729 % of family members)
Environment Ontology (ENVO)	Unclassified (46.729 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.533 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.41% β-sheet: 0.00% Coil/Unstructured: 70.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF10079	BshC	74.77
PF13620	CarboxypepD_reg	2.80
PF00958	GMP_synt_C	0.93
PF01894	UPF0047	0.93
PF09587	PGA_cap	0.93
PF02786	CPSase_L_D2	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.93
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	83.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.87 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.74 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.93 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.74 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	0.93 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.67 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.93 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Unclassified	root	N/A	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02HWPV3	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300002908\|JGI25382J43887_10121880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1356	Open in IMG/M
3300005174\|Ga0066680_10329932	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300005174\|Ga0066680_10405792	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005447\|Ga0066689_10037908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	2512	Open in IMG/M
3300005447\|Ga0066689_10600134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	694	Open in IMG/M
3300005526\|Ga0073909_10725696	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300005542\|Ga0070732_10569259	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005554\|Ga0066661_10153365	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300005555\|Ga0066692_10665063	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005557\|Ga0066704_10721993	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006059\|Ga0075017_100889087	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300006176\|Ga0070765_102005937	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300006354\|Ga0075021_11101119	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006755\|Ga0079222_12101388	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300006806\|Ga0079220_10089194	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300006806\|Ga0079220_11583785	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300007265\|Ga0099794_10200925	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300007265\|Ga0099794_10220647	All Organisms → cellular organisms → Bacteria → Acidobacteria	974	Open in IMG/M
3300007265\|Ga0099794_10408373	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300009012\|Ga0066710_100083997	All Organisms → cellular organisms → Bacteria	4170	Open in IMG/M
3300009089\|Ga0099828_10900213	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300009090\|Ga0099827_10143644	All Organisms → cellular organisms → Bacteria → Acidobacteria	1947	Open in IMG/M
3300009137\|Ga0066709_103071664	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300010048\|Ga0126373_10270082	All Organisms → cellular organisms → Bacteria → Acidobacteria	1682	Open in IMG/M
3300010048\|Ga0126373_12458239	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300010325\|Ga0134064_10217891	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300010337\|Ga0134062_10380206	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300010366\|Ga0126379_11046070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300010379\|Ga0136449_104664626	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300011269\|Ga0137392_11112660	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300011271\|Ga0137393_10221716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1600	Open in IMG/M
3300011444\|Ga0137463_1074393	All Organisms → cellular organisms → Bacteria → Acidobacteria	1273	Open in IMG/M
3300012096\|Ga0137389_10046244	All Organisms → cellular organisms → Bacteria → Acidobacteria	3261	Open in IMG/M
3300012096\|Ga0137389_10942593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300012096\|Ga0137389_11110214	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300012096\|Ga0137389_11773248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	513	Open in IMG/M
3300012096\|Ga0137389_11847039	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300012189\|Ga0137388_10835460	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300012189\|Ga0137388_10939587	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300012189\|Ga0137388_11316093	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300012189\|Ga0137388_11322871	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300012202\|Ga0137363_11403179	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300012202\|Ga0137363_11482779	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300012202\|Ga0137363_11716826	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300012203\|Ga0137399_10474704	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300012203\|Ga0137399_10685333	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300012203\|Ga0137399_10976615	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300012205\|Ga0137362_10244081	All Organisms → cellular organisms → Bacteria → Acidobacteria	1551	Open in IMG/M
3300012205\|Ga0137362_10888874	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300012205\|Ga0137362_11526502	Not Available	555	Open in IMG/M
3300012206\|Ga0137380_11271475	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300012357\|Ga0137384_11130804	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300012361\|Ga0137360_10345767	All Organisms → cellular organisms → Bacteria → Acidobacteria	1244	Open in IMG/M
3300012361\|Ga0137360_11384341	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300012362\|Ga0137361_10518853	All Organisms → cellular organisms → Bacteria → Acidobacteria	1094	Open in IMG/M
3300012363\|Ga0137390_11685908	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300012582\|Ga0137358_10034674	All Organisms → cellular organisms → Bacteria → Acidobacteria	3327	Open in IMG/M
3300012582\|Ga0137358_11092246	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300012685\|Ga0137397_10643184	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300012918\|Ga0137396_10508435	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300012925\|Ga0137419_10534626	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300012925\|Ga0137419_10814396	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300012927\|Ga0137416_10741241	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300012927\|Ga0137416_11080273	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300012929\|Ga0137404_11376848	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300012930\|Ga0137407_10645623	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300012957\|Ga0164303_10656213	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300015052\|Ga0137411_1370528	All Organisms → cellular organisms → Bacteria	5518	Open in IMG/M
3300015193\|Ga0167668_1105684	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300015241\|Ga0137418_10339869	All Organisms → cellular organisms → Bacteria → Acidobacteria	1242	Open in IMG/M
3300015245\|Ga0137409_10170629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1977	Open in IMG/M
3300017973\|Ga0187780_10446971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300020579\|Ga0210407_10689576	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300021168\|Ga0210406_11055822	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300021432\|Ga0210384_11555318	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300021559\|Ga0210409_10424996	All Organisms → cellular organisms → Bacteria → Acidobacteria	1187	Open in IMG/M
3300024288\|Ga0179589_10322106	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300024330\|Ga0137417_1260458	All Organisms → cellular organisms → Bacteria → Acidobacteria	1615	Open in IMG/M
3300025912\|Ga0207707_10842229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	761	Open in IMG/M
3300025939\|Ga0207665_10732770	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300025941\|Ga0207711_10095023	All Organisms → cellular organisms → Bacteria → Acidobacteria	2628	Open in IMG/M
3300026281\|Ga0209863_10180805	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300026306\|Ga0209468_1197384	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300026325\|Ga0209152_10456341	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300026482\|Ga0257172_1104946	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300026514\|Ga0257168_1055164	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300026557\|Ga0179587_10760075	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300027660\|Ga0209736_1112934	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300027729\|Ga0209248_10016402	All Organisms → cellular organisms → Bacteria → Acidobacteria	2321	Open in IMG/M
3300027765\|Ga0209073_10046317	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300027842\|Ga0209580_10143511	All Organisms → cellular organisms → Bacteria → Acidobacteria	1172	Open in IMG/M
3300027862\|Ga0209701_10081599	All Organisms → cellular organisms → Bacteria → Acidobacteria	2038	Open in IMG/M
3300027862\|Ga0209701_10308023	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300027882\|Ga0209590_10148801	All Organisms → cellular organisms → Bacteria → Acidobacteria	1450	Open in IMG/M
3300027894\|Ga0209068_10971010	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300028906\|Ga0308309_10494164	All Organisms → cellular organisms → Bacteria → Acidobacteria	1057	Open in IMG/M
3300030054\|Ga0302182_10480969	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300030057\|Ga0302176_10346662	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300030617\|Ga0311356_11684387	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300031754\|Ga0307475_10409334	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300031754\|Ga0307475_10483647	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300031823\|Ga0307478_11064548	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300031947\|Ga0310909_10498645	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300031962\|Ga0307479_10173123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2121	Open in IMG/M
3300031962\|Ga0307479_10818816	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300032205\|Ga0307472_100317629	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.39%
Aquatic	Environmental → Aquatic	4.67%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.59%
Sediment	Environmental → Aquatic → Sediment	3.74%
Peat	Environmental → Terrestrial → Peat	2.80%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.05%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	57.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	46.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_08815120	2170459005	Grass Soil	YAMDQRGYRGGVPRLPLQPLNDERKRRVSDLLGELEPATARA
JGI25382J43887_101218801	3300002908	Grasslands Soil	MDQRGYRGGIPRLPLLPLHAEQKKRLTEFLLNLEPAAVRA*
Ga0066680_103299321	3300005174	Soil	KLIVSEGGVAGVKFVMDQRGYRGGIPRLPLQPLSNEQKTRISDFLARLEPATARA*
Ga0066680_104057921	3300005174	Soil	KLIVSEGGVAGVKFVMDQRGYRGGIPRLPLQPLSNEQKTRISEFVTHLEPATASA*
Ga0066689_100379081	3300005447	Soil	MDQRGYSGGLPRLPLLPLHQEQKKRLNALLATLEPAAVRA*
Ga0066689_106001341	3300005447	Soil	SEMGIAGLKYIMDQRGYRGGIPRLPLRPLQNEQKKRLSEFLAILEPIAVRA*
Ga0073909_107256963	3300005526	Surface Soil	PGVKFVMDQRGYRGGAPRSPLLPLTDAAKRRVLELLAAFEPAAARA*
Ga0070732_105692592	3300005542	Surface Soil	MDQRGYHGGAPRLPLLPLADAAKRRVLELLATFEPIAARA*
Ga0066661_101533651	3300005554	Soil	KYSMDQRGYRGGIPRPPLLPLHHEQKKRLTEFLTTLEPAAVRR*
Ga0066692_106650631	3300005555	Soil	GGVAGVKFVMDQRGYRGGIPRLPLQPLSNEQKTRISEFVTHLEPATASA*
Ga0066704_107219931	3300005557	Soil	SKLIVSEGGVAGVKFVMDQRGYRGGIPRLPLQPLSNEQKTRISEFVTHLEPATASA*
Ga0075017_1008890872	3300006059	Watersheds	FVMDQRGYRGGAPRSPLLPLSDAARRRVSALLATFEPVAARA*
Ga0070765_1020059372	3300006176	Soil	YRGGIPRLPLLPLHDEQKKRVNELLAGLEPAAMRA*
Ga0075021_111011192	3300006354	Watersheds	VKHAMDQRGYRGGIPRLPLQPLHHEQKKRLTELLATLEPAAVRA*
Ga0079222_121013881	3300006755	Agricultural Soil	DQRGYRGGLPRPPLLPIPEALKHKLVELLAAVEPVAARA*
Ga0079220_100891942	3300006806	Agricultural Soil	MDQRGYRGGVPRLPLLPLQEEQKKRITALLETFEPAAMRA*
Ga0079220_115837852	3300006806	Agricultural Soil	GVKYVMDQRGYRGGVPRLPLLPLKDEQKKRLKAFVETLEPAAMRA*
Ga0099794_102009251	3300007265	Vadose Zone Soil	MDQRGYRGGLPRLPLLPLHDEQKKRLSEFLATLEPAAVRA*
Ga0099794_102206472	3300007265	Vadose Zone Soil	GLKHVMDLRGYRGGLPRLPLLPLQPEQKTRLSEFIATLEPAVARA*
Ga0099794_104083732	3300007265	Vadose Zone Soil	GIPGVKFVMDQRGYHGGIPRLPLQPLSEAAKQRVLELLATFDPIAARA*
Ga0066710_1000839973	3300009012	Grasslands Soil	MGIAGLKYVMDQRGYRGGIPRLPLRPLQNEQKKRLSEFLAILEPIAVRA
Ga0099828_109002131	3300009089	Vadose Zone Soil	HGGAPRLPLLPLSDAAKRRVLDVVAAFEPAAARA*
Ga0099827_101436443	3300009090	Vadose Zone Soil	GLKYIMDQRGYRGGIPRLPLRPLQNEQKKRLSEFLAVLEPIAVRA*
Ga0066709_1030716641	3300009137	Grasslands Soil	AMDQRGYRGGNPRLPLLPLHSEQKKRLTELLQTLEPAAVRA*
Ga0126373_102700821	3300010048	Tropical Forest Soil	DQRGYRGGLPRLPLLPLHDEQKKRLNALLETFEAAAMRA*
Ga0126373_124582391	3300010048	Tropical Forest Soil	GIPAVKFVMDHRGYKGGVPRLPIPALHEEQKKRLMELLGTLEPAAARV*
Ga0134064_102178911	3300010325	Grasslands Soil	AGVKYAMDQRGYRGGIPRLPLLPLHAEQKKRLTEFLLNLEPAAVRA*
Ga0134062_103802062	3300010337	Grasslands Soil	AMDQRGYRGALPRLPLLPLHDEQKKRLIEFLRTLEPAAVRA*
Ga0126379_110460702	3300010366	Tropical Forest Soil	AGIKFAMDQRGYRGGMPRLPLLPLADAAKPRILQSLAKLEEPLAARV*
Ga0136449_1046646262	3300010379	Peatlands Soil	GVKYVMDQRGYRGGLPRLPLLPLSDSQKHRIDELLATLEPAAMRA*
Ga0137392_111126601	3300011269	Vadose Zone Soil	QKNLLRASKLIVSELGIPGVKFVMDQRGYHGGIPRLPLQPLSDAAKRRVLELLAAFEPAAARA*
Ga0137393_102217161	3300011271	Vadose Zone Soil	AMDQRGYRGGIPRLPLQPLSDERKAWISSLLADLEPAAARA*
Ga0137463_10743932	3300011444	Soil	IAGLKHAMDQRGYRGGIPRLPLLPLHHEQKKRLNDFLATLEPAVVRA*
Ga0137389_100462441	3300012096	Vadose Zone Soil	GYRGGIPRPPLLPLQHEQKKRLTEFLATLEPATARA*
Ga0137389_109425932	3300012096	Vadose Zone Soil	YRGGIPRLPLQPLTDEEKRRISDFLAELEPATARA*
Ga0137389_111102141	3300012096	Vadose Zone Soil	ELQKNLLRASKLIVSELGIPGVKFVMDQRGYHGGIPRLPLQPLSDAAKRRVLELLAAFEPAAARA*
Ga0137389_117732481	3300012096	Vadose Zone Soil	KLIVSELGIPGVKFVMDQRGYHGGIPRLPLQPLSEAAKQRVLELLATFDPIAARA*
Ga0137389_118470392	3300012096	Vadose Zone Soil	RGGIPRLPLFPLHQEQKKRLNDFLATLEPAAVRA*
Ga0137388_108354601	3300012189	Vadose Zone Soil	IAGVKHAMDQRGYRGGIPRLPLLPLHHEQKKRLTEFLASLEPAAVRA*
Ga0137388_109395871	3300012189	Vadose Zone Soil	QRGYRGGIPRPPLLPLHHEQKKRLTEFLITLEPATVRA*
Ga0137388_113160932	3300012189	Vadose Zone Soil	VMDLRGYRGGLPRLPLLPLQPEQKTRLSEFIATLEPAVARA*
Ga0137388_113228711	3300012189	Vadose Zone Soil	VKFVMDQRGYHGGIPRLPLQPLSEAAKRRVLELLVTFEPAAATA*
Ga0137363_114031791	3300012202	Vadose Zone Soil	QRGYRGGIPRLPLRPLQNEQKKRLSEFLAILEPMAVRA*
Ga0137363_114827791	3300012202	Vadose Zone Soil	AMDQRGYRGGIPRPPLLPLHHEQKKRLTEFLATLEPAVMRA*
Ga0137363_117168262	3300012202	Vadose Zone Soil	VKFVMDQRGYRGGVPRSPLLPLSDAAKRRVLELLGTFEPAAARA*
Ga0137399_104747042	3300012203	Vadose Zone Soil	AMDQRGYRGGVPRLPLLPLQHEQKKRLTEFLANLEPAAVRA*
Ga0137399_106853331	3300012203	Vadose Zone Soil	VSEMGIAGVKFAMDQRGYRGGVPRLPLVPLHQEQKKRLNDFVATLEPAAVRA*
Ga0137399_109766152	3300012203	Vadose Zone Soil	VSEMGIAGVKFAMDQRGYRGGVPRLPLVPLHQEQKKRLNDFLASLEPAAVRA*
Ga0137362_102440811	3300012205	Vadose Zone Soil	RGGIPRLPLLPLHAEQKKRLTEFLLNLEPAAVRA*
Ga0137362_108888741	3300012205	Vadose Zone Soil	HAMDQRGYRGGIPRLPLLPLHHEQKKRLTEFLASLEPAAVRA*
Ga0137362_115265022	3300012205	Vadose Zone Soil	QRGYRGGAPRSPLLPLSDAAKRRVLDLLATFEPVAARA*
Ga0137380_112714752	3300012206	Vadose Zone Soil	MDQRGYRGGLPRLPLLPLHDEQKKRLNTLLETLEPAAMRA*
Ga0137384_111308042	3300012357	Vadose Zone Soil	YRGEQPRLPLPPRNDEQKKRLVTLLETLEPAAMLA*
Ga0137360_103457671	3300012361	Vadose Zone Soil	KHAMDQRGYRGGIPRLPLLPLHHEQKKRLTEFLASLEPAAVRA*
Ga0137360_113843411	3300012361	Vadose Zone Soil	YAMDQRGYRGGIPRPPLLPLQHEQKKRLTEFLATLEPATARA*
Ga0137361_105188531	3300012362	Vadose Zone Soil	HAMDQRGYSGGLPRLPLLPLHQEQKKRLNALLATLEPAAVRA*
Ga0137390_116859082	3300012363	Vadose Zone Soil	LKYVMDQRGYRGGIPRLPLQPLQNEQKKRLSEFLAILEPIAVRA*
Ga0137358_100346741	3300012582	Vadose Zone Soil	VKFVMDQRGYYGGLPRLPLLPLSDGAKKRVLELLAALEPAAARA*
Ga0137358_110922462	3300012582	Vadose Zone Soil	RGYRGGLPRLPLLPLHDEQKKRLSELLATLEPAAVRA*
Ga0137397_106431842	3300012685	Vadose Zone Soil	GIPVVKFVMDQRGYRGGAPRSPLLPLSDAGKRRVLDLLAAFEPAAARA*
Ga0137396_105084352	3300012918	Vadose Zone Soil	GVKFAMDQRGYRGGVPRLPLVPLHQEQKKRLNDFVATLEPAAVRA*
Ga0137419_105346262	3300012925	Vadose Zone Soil	GIAGVKFAMDQRGYRGGVPRLPLVPLHQEQKKRLNDFLASLEPAAVRA*
Ga0137419_108143962	3300012925	Vadose Zone Soil	YRGGAPRSPLLPLSDAAKRRVLELLAAFEPAAARA*
Ga0137416_107412412	3300012927	Vadose Zone Soil	VSEMGIAGVKFAMDQRGYRGGVPRLPLVPLHQEQKKRLNDFLATLEPAAVRA*
Ga0137416_110802731	3300012927	Vadose Zone Soil	LIVSEAGIAGVKFVMDQRGYRGGIPRPPLPSLTEEVKKRLIALLAALEPAVARA*
Ga0137404_113768482	3300012929	Vadose Zone Soil	DLRGYRGGLPRLPLLPLQPEQKTRLSEFFATLEPAVARA*
Ga0137407_106456231	3300012930	Vadose Zone Soil	VMDLRGYRGGLPRLPLLPLQLEQKTRLSEFIATLEPAVARA*
Ga0164303_106562131	3300012957	Soil	MDQRGYRGGIPRLPIPPPTEAAKQRILEVLATLEPAAARV*
Ga0137411_13705281	3300015052	Vadose Zone Soil	MDQRGYRGGIPRLPLQPLNDERKRRVSDLLGELEPATARA*
Ga0167668_11056841	3300015193	Glacier Forefield Soil	PGVKFVMDQRGYRGGVTRSPLLPLSDAAKVRVLEFLATFEPVAARA*
Ga0137418_103398693	3300015241	Vadose Zone Soil	RGGAPRSPLLPLSDAAKRRVLDLLANFEPVAARA*
Ga0137409_101706291	3300015245	Vadose Zone Soil	GYRGGLPRLPLQPLNEEQRKRISEMLASLEPATARA*
Ga0187780_104469712	3300017973	Tropical Peatland	VKYAMDQRGYRGGIPRLPLQPLHEEQKKRICQVLESLEPAVARA
Ga0210407_106895761	3300020579	Soil	QRGYRGGIPRLPLQPLSDAAKGRVLELLATSEPAAARA
Ga0210406_110558222	3300021168	Soil	VKFVMDQRGYRGGIPRLPLQPLSDAAKGRVLELLATSEPAAARA
Ga0210384_115553181	3300021432	Soil	LQAVLARASKLIVSELSIAGVKCAMDQRGYRGGIPRLPLQPLHHEQKKRVTDVLAALEPAAVRA
Ga0210409_104249962	3300021559	Soil	LKHVMDQRGYRGGLPRLPLLPLHQEQKKRLNEFLVTLEPAAVRA
Ga0179589_103221062	3300024288	Vadose Zone Soil	DFGIAGVKHVMDLRGYKGGHPRLPLLPLEDWHKKRIDGVVAGVEPAAVGACAQ
Ga0137417_12604582	3300024330	Vadose Zone Soil	GVKFVMDQRGYRGGLPRLPLVPLSDAAKKRVLEFLATLEPAAARA
Ga0207707_108422291	3300025912	Corn Rhizosphere	SVMDQRGYYGGLPRLPLLPVADAAKKRVLELLSTLEPAAARA
Ga0207665_107327701	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	KYVMDLRGYRGGLPRLPLLPLQPEQKTRLSEFVATLEPAVARA
Ga0207711_100950233	3300025941	Switchgrass Rhizosphere	AMDQRGYRGGIPRLPIPPPAESAKQRILEMLATLEPVAARA
Ga0209863_101808052	3300026281	Prmafrost Soil	VSEMGIAGVKYAMEQRGYRGGIPRLPLPALSAEQKTKLAAFLATLEQPIMASA
Ga0209468_11973841	3300026306	Soil	KYAMDQRGYRGGNPRLPLLPLHSEQKKRLTELLQTLEPAAVRA
Ga0209152_104563412	3300026325	Soil	YAMDQRGYRGGNPRLPLLPLHSEQKKRLTELLQTLEPAAVRA
Ga0257172_11049461	3300026482	Soil	AGVKFVMDQRGYRGGIPRLPLQPLSDERKARISSLLADLEPATARA
Ga0257168_10551641	3300026514	Soil	VSEMGIAGVKFAMDQRGYRGGVPRLPLVPLHQEQKKRLNDFLATLEPAAVRA
Ga0179587_107600751	3300026557	Vadose Zone Soil	QRGYHGGLPRLPLLPLADGAKRRVLELLATFEPAAARA
Ga0209736_11129341	3300027660	Forest Soil	IVSEMGIAGIKYVMDQRGYRGGIPRLPLQPLSTDQKSRLTTFLATLEQPAMAAT
Ga0209248_100164022	3300027729	Bog Forest Soil	VKFVMDQRGYHGGVPRLPLAPLHDEQKKRLSEFLGSLELVAARA
Ga0209073_100463172	3300027765	Agricultural Soil	MDQRGYRGGVPRLPLLPLQEEQKKRITALLETFEPAAMRA
Ga0209580_101435113	3300027842	Surface Soil	FRGGLPRLPLLPLKDEQKKRVNALLETLEPAAMRA
Ga0209701_100815992	3300027862	Vadose Zone Soil	DQRGYRGGAPRSPLLPLSDAAKRRVLDLLATFEPVAARA
Ga0209701_103080232	3300027862	Vadose Zone Soil	IPGVKFVMEQRGYHGGAPRLPLQPLSEAAKKRVLEFLATFEPAAATA
Ga0209590_101488011	3300027882	Vadose Zone Soil	ELGIPGVKFVMDQRGYHGGAPRLPLQPLSEAAKKRVLEFLATFEPAAATA
Ga0209068_109710101	3300027894	Watersheds	DLREYRGGDPRLPLLPLQEEQKKQLSGLLASLEPATARA
Ga0308309_104941641	3300028906	Soil	GLTGVKYVMDQRGYRGGIPRLPLLPLHDEQKKRVNELLAGLEPAAMRA
Ga0302182_104809691	3300030054	Palsa	SEMGIAGVKFVMDQRGYRGGLPRLPLLPLEEWHKKRITGLLATIEPAAVGACAT
Ga0302176_103466622	3300030057	Palsa	KFVMDQRGYRGGLPRLPLLPLEEWHKKRITGLLATIEPAAVGACAT
Ga0311356_116843872	3300030617	Palsa	IAGVKFVMDQRGYRGGLPRLPLLPLEEWHKKRITGLLATIEPAAVGACAT
Ga0307475_104093341	3300031754	Hardwood Forest Soil	AGVKHTMDQRGYRGGIPRLPLPPLHHEQKKRLTEFLATLEPAAVRA
Ga0307475_104836472	3300031754	Hardwood Forest Soil	RGYSGGLPRLPLQPLADSAKRRVLELLATFEPSVARA
Ga0307478_110645481	3300031823	Hardwood Forest Soil	IAGVKFVMDQRGYRGGAPRSPLLPLSDAAKRRVLELLATFEPAAARA
Ga0310909_104986451	3300031947	Soil	DQRGYRGGLPRLPLLPLQDEQKKRLNAFLEALEPAAMRA
Ga0307479_101731233	3300031962	Hardwood Forest Soil	QRGYRGGLPRLPLLPLHDEQKKRLSEFLATMEPAAVRA
Ga0307479_108188162	3300031962	Hardwood Forest Soil	MGIAGVKHVMDQRGYRGGIPRLPLLPLHHEQKKRLMEFLANLEPAAVRA
Ga0307472_1003176291	3300032205	Hardwood Forest Soil	ASKAIISESGIAGLKHIMDLRGYRGGIPRLPLQPLQPEQKTRLSEFMATLEPAVARA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092384

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences