Metagenome / Metatranscriptome Family F092385

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092385
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	63 residues
Representative Sequence	GLQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPHGYFPGKHAAVPTADKPDY
Number of Associated Samples	86
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.08 %
% of genes near scaffold ends (potentially truncated)	84.11 %
% of genes from short scaffolds (< 2000 bps)	87.85 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.832 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.972 % of family members)
Environment Ontology (ENVO)	Unclassified (34.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.486 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 16.09% Coil/Unstructured: 83.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF17200	sCache_2	10.28
PF12071	DUF3551	1.87
PF08281	Sigma70_r4_2	1.87
PF02661	Fic	1.87
PF00355	Rieske	1.87
PF13358	DDE_3	1.87
PF03401	TctC	0.93
PF01434	Peptidase_M41	0.93
PF00293	NUDIX	0.93
PF01292	Ni_hydr_CYTB	0.93
PF13376	OmdA	0.93
PF00351	Biopterin_H	0.93
PF00892	EamA	0.93
PF01593	Amino_oxidase	0.93
PF00805	Pentapeptide	0.93
PF13089	PP_kinase_N	0.93
PF03992	ABM	0.93
PF04023	FeoA	0.93
PF08448	PAS_4	0.93
PF13950	Obsolete Pfam Family	0.93
PF13751	DDE_Tnp_1_6	0.93
PF13450	NAD_binding_8	0.93
PF03972	MmgE_PrpD	0.93
PF03466	LysR_substrate	0.93
PF09587	PGA_cap	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.93
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.93
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.93
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.93
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.93
COG3038	Cytochrome b561	Energy production and conversion [C]	0.93
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.93
COG3186	Phenylalanine-4-hydroxylase	Amino acid transport and metabolism [E]	0.93
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.93
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.58 %
Unclassified	root	N/A	26.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.02 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	11.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.10 %
Unclassified	root	N/A	26.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.02 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	10.28 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.02 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.02 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	10.28 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.87 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.02 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	10.28 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	8.41 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.87 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.02 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	10.28 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	8.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.87 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.93 %
Shinella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella	0.93 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.02 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	10.28 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	8.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.87 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	0.93 %
Shinella lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → Shinella lacus	0.93 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.93 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.02 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	10.28 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	8.41 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.87 %
Bradyrhizobium sp. AT1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	0.93 %
Novosphingobium sp. Rr 2-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Rr 2-17	0.93 %
Shinella lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → Shinella lacus	0.93 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003351\|JGI26346J50198_1028397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	558	Open in IMG/M
3300004092\|Ga0062389_100785517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1131	Open in IMG/M
3300005332\|Ga0066388_104559099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300005332\|Ga0066388_105028172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	672	Open in IMG/M
3300005332\|Ga0066388_107488352	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300005364\|Ga0070673_100185275	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1784	Open in IMG/M
3300005454\|Ga0066687_10401000	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005538\|Ga0070731_10239870	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300005764\|Ga0066903_106495017	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005921\|Ga0070766_10263683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1096	Open in IMG/M
3300005921\|Ga0070766_10883385	Not Available	612	Open in IMG/M
3300006032\|Ga0066696_10484895	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300006052\|Ga0075029_100416553	Not Available	875	Open in IMG/M
3300006176\|Ga0070765_101992856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300006844\|Ga0075428_101794089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	639	Open in IMG/M
3300010048\|Ga0126373_11631289	Not Available	709	Open in IMG/M
3300010048\|Ga0126373_11967967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300010359\|Ga0126376_11870346	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	639	Open in IMG/M
3300010359\|Ga0126376_12985196	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010360\|Ga0126372_10831760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300010360\|Ga0126372_11100136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AT1	813	Open in IMG/M
3300010360\|Ga0126372_11248226	Not Available	769	Open in IMG/M
3300010360\|Ga0126372_11814795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300010366\|Ga0126379_12488188	Not Available	616	Open in IMG/M
3300010366\|Ga0126379_13787617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300010376\|Ga0126381_103479883	Not Available	619	Open in IMG/M
3300010376\|Ga0126381_103530122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300010379\|Ga0136449_101659607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	966	Open in IMG/M
3300010398\|Ga0126383_10562580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300010880\|Ga0126350_11653636	Not Available	663	Open in IMG/M
3300011120\|Ga0150983_14004040	Not Available	525	Open in IMG/M
3300012363\|Ga0137390_11099479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300012363\|Ga0137390_11418270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300012930\|Ga0137407_10626840	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300012944\|Ga0137410_10085217	All Organisms → cellular organisms → Bacteria → Proteobacteria	2317	Open in IMG/M
3300012971\|Ga0126369_11402523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300012971\|Ga0126369_12649529	Not Available	586	Open in IMG/M
3300014199\|Ga0181535_10454422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300014200\|Ga0181526_11082131	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	503	Open in IMG/M
3300014489\|Ga0182018_10206674	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300014489\|Ga0182018_10356390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → Shinella lacus	787	Open in IMG/M
3300014879\|Ga0180062_1010763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Rr 2-17	1823	Open in IMG/M
3300016270\|Ga0182036_10284617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1251	Open in IMG/M
3300016371\|Ga0182034_12062599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300016404\|Ga0182037_10978254	Not Available	736	Open in IMG/M
3300017970\|Ga0187783_10448841	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300017970\|Ga0187783_11304398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300017975\|Ga0187782_10322269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300018086\|Ga0187769_11079428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	608	Open in IMG/M
3300020582\|Ga0210395_10250348	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300021171\|Ga0210405_11430004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300021180\|Ga0210396_10395955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1215	Open in IMG/M
3300021401\|Ga0210393_10659461	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	854	Open in IMG/M
3300021405\|Ga0210387_11566213	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300021407\|Ga0210383_10864214	Not Available	772	Open in IMG/M
3300021476\|Ga0187846_10087796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1346	Open in IMG/M
3300021476\|Ga0187846_10490581	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	502	Open in IMG/M
3300021477\|Ga0210398_10186287	All Organisms → cellular organisms → Bacteria → Proteobacteria	1691	Open in IMG/M
3300021478\|Ga0210402_11728500	Not Available	552	Open in IMG/M
3300021861\|Ga0213853_10389806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300022716\|Ga0242673_1139695	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	501	Open in IMG/M
3300024225\|Ga0224572_1053881	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	748	Open in IMG/M
3300026467\|Ga0257154_1063505	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	580	Open in IMG/M
3300026494\|Ga0257159_1054576	Not Available	681	Open in IMG/M
3300026514\|Ga0257168_1084713	Not Available	703	Open in IMG/M
3300027692\|Ga0209530_1196644	Not Available	557	Open in IMG/M
3300027869\|Ga0209579_10155153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1221	Open in IMG/M
3300027875\|Ga0209283_10664203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300028906\|Ga0308309_11513991	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	573	Open in IMG/M
3300030007\|Ga0311338_11342324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300031090\|Ga0265760_10157579	Not Available	748	Open in IMG/M
3300031564\|Ga0318573_10299350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	861	Open in IMG/M
3300031708\|Ga0310686_101992005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1597	Open in IMG/M
3300031708\|Ga0310686_112922674	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	548	Open in IMG/M
3300031719\|Ga0306917_10638745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300031719\|Ga0306917_10960408	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300031736\|Ga0318501_10331961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
3300031744\|Ga0306918_11016226	Not Available	644	Open in IMG/M
3300031771\|Ga0318546_10850491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300031778\|Ga0318498_10507496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	531	Open in IMG/M
3300031793\|Ga0318548_10402663	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031845\|Ga0318511_10370576	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300031893\|Ga0318536_10417971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	677	Open in IMG/M
3300031896\|Ga0318551_10798470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300031897\|Ga0318520_10374062	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	868	Open in IMG/M
3300031945\|Ga0310913_10147867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1622	Open in IMG/M
3300031946\|Ga0310910_11340349	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	552	Open in IMG/M
3300031954\|Ga0306926_10098773	All Organisms → cellular organisms → Bacteria	3577	Open in IMG/M
3300031954\|Ga0306926_10529767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1445	Open in IMG/M
3300031959\|Ga0318530_10239868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	746	Open in IMG/M
3300032055\|Ga0318575_10707992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300032076\|Ga0306924_11051102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	891	Open in IMG/M
3300032261\|Ga0306920_101620569	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	920	Open in IMG/M
3300032515\|Ga0348332_10262718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300032515\|Ga0348332_13426259	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300034090\|Ga0326723_0509369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.26%
Host-Associated	Host-Associated	3.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.72%
Aquatic	Environmental → Aquatic	6.54%
Plants	Host-Associated → Plants	3.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.11%
Freshwater	Environmental → Aquatic → Freshwater	4.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.80%
Sediment	Environmental → Aquatic → Sediment	1.87%
Peat	Environmental → Terrestrial → Peat	1.87%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.87%
Cave	Environmental → Terrestrial → Cave	1.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.16%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.87%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.87%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014879	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10D	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26346J50198_10283971	3300003351	Bog Forest Soil	LARNPDYKGNGLQLEFTVEDDGVFTKPWSAAVSYRRQGEWPEMVCAENPNEYFHGRRAAVPTADKPDF*
Ga0062389_1007855171	3300004092	Bog Forest Soil	EFTVEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPDGYFHGKRAAVPTADKPDF*
Ga0066388_1045590992	3300005332	Tropical Forest Soil	DPGFARNPDYKGKGLQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPQGHFAETHAAVPTANKPDF*
Ga0066388_1050281722	3300005332	Tropical Forest Soil	FARNPDYRGPGLQLDFTVEDEGAFTTPWSAAVSYRRPLGGWPEVSCAEDVHVYLPGRQLALPTADKPDF*
Ga0066388_1074883521	3300005332	Tropical Forest Soil	DYKGKGLQLEFTVEDVGVFTKSWSAGISYRRPLGEWPEMVCAENPNGYFHGRQAAVPTADKPDF*
Ga0070673_1001852752	3300005364	Switchgrass Rhizosphere	GLSRLGRDPGLVTNPDYRGKGLQLEFTVEDENVFTKPWSASISYRRPLGEWPEMACADSTRDYVGRAIDLPYADKPDF*
Ga0066687_104010001	3300005454	Soil	DNPDYRGKGLQLEFTVEDENVFTGPWSASISYRRPLGEWPEMACADNTNDYIARGLKVPAANKPDF*
Ga0070731_102398701	3300005538	Surface Soil	NPKYQGEGLQLDFTVEDAGVFTMPWSASISYRRPLGQWPEVSCAENPHGYFPGKHAAIPTADKPDF*
Ga0066903_1064950172	3300005764	Tropical Forest Soil	KGRGLQLEFTVEDDGVFTRPWSAAISYRRPLGEWPEMVCAENPNGYFHGKQAAVPTADKPDF*
Ga0068860_1011839901	3300005843	Switchgrass Rhizosphere	GLAANPDYRGKGLQLEFMVEDESVFTKAWSASISYRRPLGEWSEMVCADSTRDYVGRAIALPHADKPDF*
Ga0070766_102636833	3300005921	Soil	LQLEFTVEDAGVFTTPWSATITYRRPLGEWPEVACAENRQFYPGKYAAVPTADKPDF*
Ga0070766_108833852	3300005921	Soil	MLVEGAPLLLRPQPRYRGKGLQLEFTVEDDGVFTEPWSAAISYRSPEMACAETTRDFLAGGAVKVPTADKPDF*
Ga0066696_104848953	3300006032	Soil	YTGKGLQLEFTVEDENVFTGPWSASISYRRPLGEWPEMACADNTNDYIARGLKVPAANKPDF*
Ga0075029_1004165531	3300006052	Watersheds	DDGVFTGPWSASISYRRPIGAWPEMVCAENPTEHFSGKRAAIPTADRPDF*
Ga0070765_1019928562	3300006176	Soil	DGVFTKPWSAAISYRRPLGEWPEMACAETTRDLFTGGAVKVPTADKPDF*
Ga0075428_1017940892	3300006844	Populus Rhizosphere	QKGLSRLGRDPGLAANPDYRGKGLQLEFTVEDGEVFTAPWSAGISYRRPSGEWPEMACADNPRDLVGRTLELPQASKPDF*
Ga0126373_114303792	3300010048	Tropical Forest Soil	LDPNYRDKALQLQFTVEDQGVFTMAWSATITRRRSSSEWPEFVCVENPHGYFPGKHAAVPTAEKPDF*
Ga0126373_116312891	3300010048	Tropical Forest Soil	KGKGLQLDFTVEDDGVFPKPWSAAISYRRPIGEWPEIVCAENPQGYFRGKRTALPTADKPDF*
Ga0126373_119679672	3300010048	Tropical Forest Soil	NSDPGFAPNPNYRGNGLQLQFTVKDEGVFTMPWSAAITYRRPLGEWPEMVCAENPHGYYPGKYAAVPTAEKPDF*
Ga0126376_118703461	3300010359	Tropical Forest Soil	GVGIDLGYRGKALQVQFTVEDENVFTEPWSAAISYRRPLGEWPEMACADNTNDYIGRGLKTPTATKPDF*
Ga0126376_129851961	3300010359	Tropical Forest Soil	GVFTGPWSAAISYRRPLGQWPEMACAENNREYFSGRQAAVPAAVKPDF*
Ga0126372_108317602	3300010360	Tropical Forest Soil	EFTVEDDGVFTKPWSGAISYRRPLGEWPEMVCAENPDGHFPGKRTAVPTANKSDF*
Ga0126372_111001362	3300010360	Tropical Forest Soil	FARNPDYKGKGLQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPQGHFPETHAAVPTADKPDF*
Ga0126372_112482261	3300010360	Tropical Forest Soil	ARNPDYKGKGLQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPQGYFPGTHAAVPTADKPDF*
Ga0126372_118147951	3300010360	Tropical Forest Soil	GLSRLGRDPGLDANPDYRGQGLQLEFTVEDENVFTKPWSAAVSYRRPLGDWPEMACADTTRDYSGRALAPPKADKPDF*
Ga0126379_124881881	3300010366	Tropical Forest Soil	VEDDGVFTRPWSAAISYRRPLGEWPEMVCAENPNGYFHGKQAAVPTADKPDF*
Ga0126379_137876172	3300010366	Tropical Forest Soil	KGLSRLGRDPGLAANPDYRGKGLQLDFTVDDENVFFKPWSASISYRRPSGDWPEMVCADNTNDYIGRAINAPKADKPDF*
Ga0126381_1034798831	3300010376	Tropical Forest Soil	PGFVSNPDYKGKGLQLDFTVEDGDVFTKPWWASISYRRPIGEWPEIVCAENPQGYFRGKRTALPTADKPDF*
Ga0126381_1035301222	3300010376	Tropical Forest Soil	GLLSDPDYKGKGLQLEFTVEDEGVFTRPWSAGISYRRPRGEWPEMVCAENPDGYFRGRHVAVPTAATPDF*
Ga0136449_1016596071	3300010379	Peatlands Soil	FTVEDDGVFTKPWSAAVSYRRPSGEWPEMACAENPHKYNTEKDATAPTADKPDF*
Ga0126383_105625802	3300010398	Tropical Forest Soil	LQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPQGHFAETHAAVPTADKPDF*
Ga0126350_116536361	3300010880	Boreal Forest Soil	RNYKGSGLALQFTVEDDGVFTTPWTAGITYRRPLGGWPEMVCAENPHKYRDGKAASLPTADGPDF*
Ga0150983_140040402	3300011120	Forest Soil	DEGVFTKPWSAAISYRRPLGQWPEMACAETTRDFFSGKAVGVPTANKPDF*
Ga0137390_110994791	3300012363	Vadose Zone Soil	RNPDYKGPGLQLEFTVEDEGVFTKPWSASISYRRPLGDWPEMVCAENPHEYFSGRHAATPTAVKPDF*
Ga0137390_114182701	3300012363	Vadose Zone Soil	DGVFTKPWSAAISYRRPLGEWPEMACAENPDGYFPGKHAAVPTADKPDF*
Ga0137407_106268402	3300012930	Vadose Zone Soil	PGLQLEFTVEDEGVFTRPWSAAISYRRPLGQWPEMACAENNREYFSGRHIAVPTAVTPDF
Ga0137410_100852174	3300012944	Vadose Zone Soil	DYRGKGLQLEFTVEDGGVFTKTWSAAISYRRPLGEWPEMACADNTHDYLGRGIKPPQAAKPDF*
Ga0126369_114025231	3300012971	Tropical Forest Soil	RDPGFARNPDYKGKGLQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPQGHFPETHAAVPTADKPDF*
Ga0126369_126495292	3300012971	Tropical Forest Soil	TVEDDGVFTKPWSAAISYRRPLGEWPEMACAENPQGHFPETHAAVPTAGKQDF*
Ga0181535_104544221	3300014199	Bog	EDDGVFTKPWSAAISYRRPLGEWPEMACAETTRDFFSGGAVKVPTADKPDF*
Ga0181526_110821313	3300014200	Bog	GLQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMACAETTRDFFSGGAVKVPTADKPDF*
Ga0182018_102066742	3300014489	Palsa	DGVFTKPWSASISYRRPLGEWPEMACAETTRDFFTGGAVKVPTADKPDF*
Ga0182018_103563902	3300014489	Palsa	VSNYLQLEFTVEDDGVFAKRSAAVSYRRQGEWPEMLYAENPNEYFHGWRAAVPTADNPDF
Ga0180062_10107631	3300014879	Soil	DPGLIANPDYRGQGLQLEFTVEDGGVFTAPWSAGISYRRPSGEWPEMACADNPRDLVGRTLDLPQASKPDF*
Ga0182036_102846173	3300016270	Soil	VEDEGVFTRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0182034_120625991	3300016371	Soil	QLEFTVEDEGVFTRPWSAGISYRRPLGEWPEMVCAENPDGYFRGRRVAIPTAATPDF
Ga0182037_109782542	3300016404	Soil	GRDPGFVSNPDYKGKGLQLDFTIEDGVVFTKPWSASISYRRPIGEWPEVVCAENPQGYFRGKRTALPTADKPDF
Ga0187783_104488411	3300017970	Tropical Peatland	VEDQGVFTMPWSATITRRRSSSEWPEFVCVENPNGYFPGKHAAVPAADRSDF
Ga0187783_113043981	3300017970	Tropical Peatland	VSGNGLELDPKYADRALQLVFTVEDAGVFTMPWTATITRRRSSSDWLEFVCAENPNGYFPGKQTAIPTADRPDF
Ga0187782_103222691	3300017975	Tropical Peatland	GLQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPHGYFPGKHAAVPTADKPDY
Ga0187769_110794281	3300018086	Tropical Peatland	KGLQLEFTVEDNGVFTGPWSAAVSYRRPLGEWPEVACADNLGGFLSGKRVAAPAANKPDF
Ga0210395_102503481	3300020582	Soil	NPAYRGEGLQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMACAETTRDFFTGGAVMVPTADKPDF
Ga0210405_114300041	3300021171	Soil	QNSDPGLARNRDYKGKGLQLEFTVEDEGVFTTPWSAAISYRRPLGQWPEMVCAETRHGYSPGKDTEVPTAEKPDF
Ga0210396_103959553	3300021180	Soil	EGLQLEFTVEDEGVFTKPWSAAISYRRPVGQWPEMACAETTRDFFSGKTVGVPTANKPDF
Ga0210393_106594612	3300021401	Soil	MGKGLQLEFTVEDDSVFTSPWSAAVSYRRPLGEWPEVACAENPDGYWPGRHVAAPTADKPDF
Ga0210387_115662132	3300021405	Soil	EFTVEDDGVFTKPWSAAISYRRPLGEWPEMACAETTRDLFTGGAVKVPTADKPDF
Ga0210383_108642141	3300021407	Soil	EDEGVLTQPWSASISYRRPLGDWPEMACAENSAGHFGGEKAPAMPIAGKPDF
Ga0187846_100877963	3300021476	Biofilm	YRGPGLQLEFTVEDEGVFTKPWSAAISYRRPLGQWPEMACAENNREYFSGRQAAVPTAVKPDF
Ga0187846_104905811	3300021476	Biofilm	LARNPDYKGKGLQLEFTVEDDGVFTRSWSAAISYRRPLGGWPEMVCAENPQGHFPGTHAAVPTADKPNF
Ga0210398_101862874	3300021477	Soil	LQLEFTVEDAGVFTTPWSATITYRRPLGEWPEVACAENRQFYPGKYAAVPTADKPDF
Ga0210402_117285002	3300021478	Soil	EFTVEDGGVFTKPWSAAISYRRPLGEWPEMVCAENPNGYFHGTRAAVPTADKLDF
Ga0126371_138382881	3300021560	Tropical Forest Soil	VEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPHGYFPGKHAAVPTADKPDF
Ga0213853_103898062	3300021861	Watersheds	LEFTVEDDGVFTRPWSASISYRRPLGAWPEMVCAETTHDFFTGTAVRMPIADKPDF
Ga0242673_11396951	3300022716	Soil	GLTRNPDYKGEGLQLEFTVEDEGVFTKPWSAAISYRRPLGQWPEMACAETTRDFFSGKTVGVPTANKPDF
Ga0224572_10538812	3300024225	Rhizosphere	DPGLARNPDYKGNGLQLEFTVEDDGVFTKPWSAAVSYRRQGEWPEMVCAENPNEYFHGRRAAVPTADKPDF
Ga0257154_10635053	3300026467	Soil	PNYKGKGLQLEFTVEDDSIFTGPWSAAVSYRRPLGEWPEVACAENANGHLPGRRVAAPTADKPDF
Ga0257159_10545761	3300026494	Soil	GVFTKPWSASISYRRPLGEWPEMVCAENPHEYFSGRHAAVPTAVNPDF
Ga0257168_10847131	3300026514	Soil	DDGVFTKPWSAAISYRRPLGEWPEMVCAENPDGYFPGKHAAVPTADKPDF
Ga0209530_11966441	3300027692	Forest Soil	DYKGKGLQLEFTVEDDVFTKPWSAAISYRRPLGEWPEMACAENPDGYFPGRRAAVPTADKPDF
Ga0209579_101551531	3300027869	Surface Soil	PGFAPNPKYQGEGLQLDFTVEDAGVFTMPWSASISYRRPLGQWPEVSCAENPHGYFPGKHAAIPTADKPDF
Ga0209283_106642031	3300027875	Vadose Zone Soil	DYKGPGLQLEFTVEDEGVFTKPWSASISYRRPLGDWPEMVCAENPHEYFSGRHAATPTAVKPDF
Ga0308309_115139911	3300028906	Soil	PGFVRDPDYRGPGLQLDFTVEDEGAFTMPWGASISYRRPLGNWPEMACAEARDYFPGKRVATPTADKPDF
Ga0311338_113423241	3300030007	Palsa	SDPGFARDLNYRGKGLQLEFTVEDEGVFTKPWSAAVSYRRPLAPLGQWPEMVCAETTHDAFTGTAVRLPTADKPDF
Ga0265760_101575791	3300031090	Soil	NGLQLEFTVEDDGVFTKPWSAAVSYRRQGEWPEMVCAENPNEYFHGRRAAVPTADKPDF
Ga0318528_106480851	3300031561	Soil	VVGRVGGANGLELDPNYRDEALQLQFTVEDEGVFTMPWSATITRRRSSSEWPEFVCVENPHGYFPGKHAAVPTADKPDF
Ga0318573_102993502	3300031564	Soil	FAPDPNYRGQGLQLQFTVEDEGMFTTPWSAAVTYQRPLGEWREMACAENPHGYFRGKRAAIPTADKPDF
Ga0310686_1019920053	3300031708	Soil	ARDANDKGKGLRLEFTVEDGGVFTMPWSASVTYRRPLGVWPEMVCADTTHELFTGREIEVPRADKPDF
Ga0310686_1129226741	3300031708	Soil	DPGFRRNPDDKGEGLQLEFTVEDDGVFTKPWSAAVSYRRPLGEWLEMVCAENPDGYFPGQHVVVPTAANSDF
Ga0306917_106387453	3300031719	Soil	EDEGVFTRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0306917_109604082	3300031719	Soil	PDYKGKGLQLDFTIEDGVVFTKPWSASISYRRPIGEWPEVVCAENPQGYFRGKRTALPTADKPDF
Ga0318501_103319611	3300031736	Soil	PDYKGEGLQLEFTVEDEGVFTRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0306918_110162261	3300031744	Soil	EGVFTRPWSAGISYRRPLGEWPEMVCAENPDGYFRGRRVAIPTAATPDF
Ga0318535_100789123	3300031764	Soil	TRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0318546_108504912	3300031771	Soil	GLQLEFTVEDDGVFTKPWSAAISYRRPLGEWPEMVCAENPQGHFPETHAAVPTADKPDF
Ga0318498_105074962	3300031778	Soil	GLLPDPDYKGKGLQLEFTVEDEGVFTRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0318548_104026632	3300031793	Soil	PDYKGRGLQLEFTVEDDGVFTRPWSAAISYRRPLGEWPEMVCAENPNGYFHGKQAAVPTADKPDF
Ga0307478_104476093	3300031823	Hardwood Forest Soil	DGVFTMPWSATITRRRSSSEWPEFVCAENPNGYFPEKHTAVPTADKPDF
Ga0318511_102732501	3300031845	Soil	GGGNGLELDPNYRDEALQLQFTVEDEGVFTMPWSATITRRRSSSEWPEFVCVENPHGYFPGKHAAVPTADKPDF
Ga0318511_103705761	3300031845	Soil	SSDPGFAPDPNYRGQGLQLQFTVEDEGMFTTPWSAAVTYQRPLGEWREMACAENPHGYFRGKRAAIPTADKPDF
Ga0318536_104179711	3300031893	Soil	PDYKGKGLQLEFTVEDEGVFTRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRRVAIPTAATPDF
Ga0318551_107984701	3300031896	Soil	YKGEGLQLEFTVEDEGVFTRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0318520_103740621	3300031897	Soil	LGRDPGFVSNPDYKGKGLQLDFTVEDGVVFTKPWSASISYRRPIGEWPEIVCAENPQGYFRGKRTALPTADKPDF
Ga0306921_121949322	3300031912	Soil	RVVGRVGGGNGLALDPNYRDKALQLQFTVEDEGVFTMPWSATITRRRSSSEWPEFVCVENPHGYFPGKHAAVPTADKPDF
Ga0310913_101478674	3300031945	Soil	EGLQLEFTVEDEGVFTRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0310910_113403491	3300031946	Soil	SDPGFAPDPNYRGQGLQLQFTVEDEGMFTTPWSAAVTYQRPLGEWREMACAENPHGYFRGKRAAIPTADKPDF
Ga0310909_109040362	3300031947	Soil	DPNYRDEALQLQFTVEDEGVFTMPWSATITRRRSSSEWPEFVCVENPHGYFPGKHAAVPTADKPDF
Ga0306926_100987735	3300031954	Soil	RLGRDPGFVSNPDYKGKGLQLDFTVEDGVVFTKPWSASISYRRPIGEWPEIVCAENPQGYFRGKRTALPTADKPDF
Ga0306926_105297673	3300031954	Soil	RDEALQLQFTVEDEGVFTMPWSATITRRRSSSEWPEFVCVENPHGYFPGKHAAVPTADKPDF
Ga0318530_102398682	3300031959	Soil	PDPDYKGKGLQLEFTVEDEGVFTRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0318532_100953193	3300032051	Soil	FTRPWSAGISYRRPRGDWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0318575_107079921	3300032055	Soil	TVEDEGVFTRPWSAGISYRRPLGEWPEMVCAENPDGYFRGRHVAVPAAATPDF
Ga0318504_105812532	3300032063	Soil	SYRDEALQLQFTVEDEGVFTMPWSATITRRRSSSEWPEFVCVENPHGYFPGKHAAVPTADKPDF
Ga0306924_110511021	3300032076	Soil	SDPGFAPNPNYRGEGLQLDFTVDDAGAFTMPWSASISYRRPLGQWPEVVCAENPHGYFPGKHAAIPTADKPDF
Ga0306920_1016205691	3300032261	Soil	GLARNPDYRGKGLQLEFTVEDDGVFTKSWSAGISYRRPLGEWPEMVCAENPNGYFHGRQAAVPTADKPDF
Ga0348332_102627183	3300032515	Plant Litter	EFTVEDEGVFTKPWSAAISYRRPLGQWPEMACAETTRDFFTGKTVGVPTAVKPDF
Ga0348332_134262591	3300032515	Plant Litter	RDPGLVPNPNYKGQGLQLDFTVEDAEVFTTPWSATVSYRRPLGDWPEVACTESAGGYLPGRHVAPPTANKSDF
Ga0326723_0509369_341_553	3300034090	Peat Soil	PGLASNPDYKGKGLQLDFTVEDDGVFAKPWSASISYRRPLGEWPEMACADNTHDYVGRGIKLPQASKPDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092385

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences