Metagenome / Metatranscriptome Family F092390

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092390
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	50 residues
Representative Sequence	MTYAKPEINRIAEATSAICLDNSLTKSVSGADLSNPHQQTAPAYFDDEE
Number of Associated Samples	79
Number of Associated Scaffolds	89

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.64 %
% of genes near scaffold ends (potentially truncated)	28.04 %
% of genes from short scaffolds (< 2000 bps)	79.44 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.159 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.084 % of family members)
Environment Ontology (ENVO)	Unclassified (26.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.551 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.36% β-sheet: 0.00% Coil/Unstructured: 63.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 89 Family Scaffolds
PF00733	Asn_synthase	28.09
PF00326	Peptidase_S9	7.87
PF13560	HTH_31	3.37
PF13537	GATase_7	3.37
PF03544	TonB_C	2.25
PF03972	MmgE_PrpD	1.12
PF13470	PIN_3	1.12
PF13338	AbiEi_4	1.12
PF13676	TIR_2	1.12
PF07043	DUF1328	1.12
PF08681	DUF1778	1.12
PF04014	MazE_antitoxin	1.12
PF00271	Helicase_C	1.12
PF00583	Acetyltransf_1	1.12
PF06411	HdeA	1.12
PF07228	SpoIIE	1.12
PF00670	AdoHcyase_NAD	1.12

COG ID	Name	Functional Category	% Frequency in 89 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.25
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	1.12
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	1.12
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	1.12
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	1.12

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.16 %
Unclassified	root	N/A	30.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.16 %
Unclassified	root	N/A	30.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.16 %
Unclassified	root	N/A	30.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	53.27 %
Unclassified	root	N/A	30.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	2.80 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	2.80 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.76 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	2.80 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	2.80 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZN2CUW02FJ0EO	Not Available	508	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105565424	All Organisms → cellular organisms → Bacteria → Acidobacteria	1993	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105565424	All Organisms → cellular organisms → Bacteria → Acidobacteria	1993	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1033288	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	664	Open in IMG/M
3300000789\|JGI1027J11758_11616764	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300000955\|JGI1027J12803_104985370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1455	Open in IMG/M
3300000955\|JGI1027J12803_106897971	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300001593\|JGI12635J15846_10002358	All Organisms → cellular organisms → Bacteria	16504	Open in IMG/M
3300004092\|Ga0062389_100522104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1338	Open in IMG/M
3300005332\|Ga0066388_101008753	Not Available	1395	Open in IMG/M
3300005529\|Ga0070741_10002408	All Organisms → cellular organisms → Bacteria	50590	Open in IMG/M
3300005529\|Ga0070741_10002408	All Organisms → cellular organisms → Bacteria	50590	Open in IMG/M
3300005529\|Ga0070741_10004073	All Organisms → cellular organisms → Bacteria	34742	Open in IMG/M
3300005531\|Ga0070738_10002617	All Organisms → cellular organisms → Bacteria → Acidobacteria	26747	Open in IMG/M
3300005541\|Ga0070733_10236511	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300005586\|Ga0066691_10715083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300005607\|Ga0070740_10124457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300005764\|Ga0066903_102535670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	993	Open in IMG/M
3300005764\|Ga0066903_108086424	Not Available	539	Open in IMG/M
3300006176\|Ga0070765_101495252	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300006904\|Ga0075424_101838926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	640	Open in IMG/M
3300007076\|Ga0075435_100317482	All Organisms → cellular organisms → Bacteria → Acidobacteria	1333	Open in IMG/M
3300009792\|Ga0126374_10859114	Not Available	699	Open in IMG/M
3300010043\|Ga0126380_11412009	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300010343\|Ga0074044_10164160	All Organisms → cellular organisms → Bacteria → Acidobacteria	1483	Open in IMG/M
3300010358\|Ga0126370_10231052	All Organisms → cellular organisms → Bacteria → Acidobacteria	1420	Open in IMG/M
3300010359\|Ga0126376_11041142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300010360\|Ga0126372_10277165	All Organisms → cellular organisms → Bacteria → Acidobacteria	1458	Open in IMG/M
3300010360\|Ga0126372_12332274	Not Available	585	Open in IMG/M
3300010362\|Ga0126377_11343680	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300010366\|Ga0126379_10155644	All Organisms → cellular organisms → Bacteria → Acidobacteria	2137	Open in IMG/M
3300010376\|Ga0126381_101297615	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300012202\|Ga0137363_10910192	Not Available	747	Open in IMG/M
3300012202\|Ga0137363_10910192	Not Available	747	Open in IMG/M
3300012203\|Ga0137399_10736008	Not Available	830	Open in IMG/M
3300012203\|Ga0137399_10736008	Not Available	830	Open in IMG/M
3300012918\|Ga0137396_11178260	Not Available	542	Open in IMG/M
3300012944\|Ga0137410_11317928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012971\|Ga0126369_11104046	Not Available	882	Open in IMG/M
3300014501\|Ga0182024_10527047	Not Available	1496	Open in IMG/M
3300015371\|Ga0132258_10017126	All Organisms → cellular organisms → Bacteria	15629	Open in IMG/M
3300016341\|Ga0182035_11548853	Not Available	597	Open in IMG/M
3300016341\|Ga0182035_11548853	Not Available	597	Open in IMG/M
3300016357\|Ga0182032_10061319	All Organisms → cellular organisms → Bacteria → Acidobacteria	2494	Open in IMG/M
3300016404\|Ga0182037_10700467	Not Available	867	Open in IMG/M
3300016445\|Ga0182038_12079352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300017822\|Ga0187802_10053209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1482	Open in IMG/M
3300017822\|Ga0187802_10053209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1482	Open in IMG/M
3300017822\|Ga0187802_10370303	Not Available	564	Open in IMG/M
3300017928\|Ga0187806_1174176	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300017928\|Ga0187806_1174176	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300017933\|Ga0187801_10470442	Not Available	529	Open in IMG/M
3300017943\|Ga0187819_10569487	Not Available	643	Open in IMG/M
3300017972\|Ga0187781_10167875	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300017972\|Ga0187781_10167875	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300017975\|Ga0187782_10573947	Not Available	866	Open in IMG/M
3300017975\|Ga0187782_10573947	Not Available	866	Open in IMG/M
3300018006\|Ga0187804_10078702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1330	Open in IMG/M
3300018062\|Ga0187784_10263074	All Organisms → cellular organisms → Bacteria → Acidobacteria	1403	Open in IMG/M
3300018062\|Ga0187784_10263074	All Organisms → cellular organisms → Bacteria → Acidobacteria	1403	Open in IMG/M
3300020579\|Ga0210407_11484870	Not Available	500	Open in IMG/M
3300020579\|Ga0210407_11484870	Not Available	500	Open in IMG/M
3300021170\|Ga0210400_10034908	All Organisms → cellular organisms → Bacteria → Acidobacteria	3898	Open in IMG/M
3300021170\|Ga0210400_10034908	All Organisms → cellular organisms → Bacteria → Acidobacteria	3898	Open in IMG/M
3300021559\|Ga0210409_10846110	Not Available	788	Open in IMG/M
3300022504\|Ga0242642_1079507	Not Available	550	Open in IMG/M
3300022504\|Ga0242642_1079507	Not Available	550	Open in IMG/M
3300022712\|Ga0242653_1076012	Not Available	584	Open in IMG/M
3300024331\|Ga0247668_1114686	Not Available	546	Open in IMG/M
3300025922\|Ga0207646_10054777	All Organisms → cellular organisms → Bacteria → Acidobacteria	3567	Open in IMG/M
3300026555\|Ga0179593_1173634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1632	Open in IMG/M
3300026557\|Ga0179587_11170646	Not Available	506	Open in IMG/M
3300027334\|Ga0209529_1035828	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300027559\|Ga0209222_1007030	All Organisms → cellular organisms → Bacteria → Acidobacteria	2367	Open in IMG/M
3300027609\|Ga0209221_1000081	All Organisms → cellular organisms → Bacteria	57570	Open in IMG/M
3300027619\|Ga0209330_1001445	All Organisms → cellular organisms → Bacteria	7069	Open in IMG/M
3300027706\|Ga0209581_1001118	All Organisms → cellular organisms → Bacteria	35265	Open in IMG/M
3300027706\|Ga0209581_1072846	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300027706\|Ga0209581_1263165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300027773\|Ga0209810_1001791	All Organisms → cellular organisms → Bacteria → Acidobacteria	29748	Open in IMG/M
3300027908\|Ga0209006_10043947	All Organisms → cellular organisms → Bacteria	4025	Open in IMG/M
3300028047\|Ga0209526_10175065	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300028047\|Ga0209526_10175065	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300028281\|Ga0247689_1026031	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300030399\|Ga0311353_10449967	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300031231\|Ga0170824_106726046	Not Available	532	Open in IMG/M
3300031231\|Ga0170824_112764443	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300031231\|Ga0170824_112764443	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300031231\|Ga0170824_126942467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300031446\|Ga0170820_10792666	Not Available	630	Open in IMG/M
3300031545\|Ga0318541_10257172	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300031668\|Ga0318542_10590814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300031751\|Ga0318494_10846044	Not Available	536	Open in IMG/M
3300031890\|Ga0306925_10493191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300031945\|Ga0310913_10711242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300031962\|Ga0307479_10170761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2136	Open in IMG/M
3300031962\|Ga0307479_10170761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2136	Open in IMG/M
3300032180\|Ga0307471_100646146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1220	Open in IMG/M
3300032205\|Ga0307472_102165560	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300032261\|Ga0306920_102416737	Not Available	725	Open in IMG/M
3300032261\|Ga0306920_102416737	Not Available	725	Open in IMG/M
3300032770\|Ga0335085_10052419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5503	Open in IMG/M
3300032770\|Ga0335085_10993572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300032782\|Ga0335082_10783052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300032783\|Ga0335079_11626864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300032893\|Ga0335069_10054940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5197	Open in IMG/M
3300032893\|Ga0335069_10054940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5197	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.20%
Host-Associated	Host-Associated	2.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.78%
Aquatic	Environmental → Aquatic	8.41%
Plants	Host-Associated → Plants	2.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.85%
Freshwater	Environmental → Aquatic → Freshwater	8.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Peat	Environmental → Terrestrial → Peat	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	12.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.35%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	9.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_05366630	2170459003	Grass Soil	MTYERPEINRIAEATTAICVDNSLIKSISGADLSNPHQMTPP
INPhiseqgaiiFebDRAFT_1055654242	3300000364	Soil	MTYSKPQINKIAEATSAIRIDNALIKSVSGADLSNPHQQTAPAYAADEE*
INPhiseqgaiiFebDRAFT_1055654243	3300000364	Soil	MNYCKPEITKIAEATTAIRLDSSLTKSVAGADLSNPHQMTAPAYAAADDD*
AP72_2010_repI_A10DRAFT_10332881	3300000651	Forest Soil	MVMTYAKPEINKIAEATSAICLDNSLLKSVSGADISNPHRQSVPAYAVDDD*
JGI1027J11758_116167641	3300000789	Soil	MTYSKPQINKIAEATSAIRIDNALIKSVSGADLSNPHQQTAPAYAAD
JGI1027J12803_1049853701	3300000955	Soil	EITKIAEATTAIRLDSSLTKSVAGADLSNPHQMTAPAYAAADDD*
JGI1027J12803_1068979711	3300000955	Soil	MTYSKPQINKIAEATSAIRIDNALIKSVSGADLSNPHQQTAPAYAADE
JGI12635J15846_1000235810	3300001593	Forest Soil	VIAVKYTKPEITRIAEATTAICLDNSLAKSIVGFDLTNPHRMTPPAYSADEE*
Ga0062389_1005221042	3300004092	Bog Forest Soil	MKYSKPEITKIADAVNAICNDGSVTKSIVGHDLSNPHWMTPPAYSADED*
Ga0066388_1010087533	3300005332	Tropical Forest Soil	MTYAKPEINRIAEATSAICLDNSLLKSVSGADISNPHRQSVPAYAVDED*
Ga0070741_1000240830	3300005529	Surface Soil	MTYSKPEINKIAEATSAICLDNVLAKSVIGADLSNPHQQTAPAYAVDED*
Ga0070741_1000240831	3300005529	Surface Soil	MSYTKPEITKIAEATTAIRFENALTKSVAGADLSNPHQMTPPAYSAEGD*
Ga0070741_1000407312	3300005529	Surface Soil	MTYSKPELCDIAEATAAICLDNALIKSVFGADLSNPHQQTAPAYAAEEE*
Ga0070738_1000261712	3300005531	Surface Soil	MTYSTPEINEIAEATSAICLDNPLIKSVFGADLSNPHQQTAPAYAAEDE*
Ga0070733_102365111	3300005541	Surface Soil	MKYSKPEITKIAEAVTAICLDDSLNKSVIGRDLTNPHQMTPPAYSADE
Ga0066691_107150832	3300005586	Soil	MTYAKPEINRIAEATSAICLDNSLTKSVSGADLSNPHQQTAPAYFDDEE*
Ga0070740_101244573	3300005607	Surface Soil	EVTAMSYTKPEITKIAEATTAIRFENALTKSVAGADLSNPHQMTPPAYSAEGD*
Ga0066903_1025356702	3300005764	Tropical Forest Soil	MTYAKPEINKIAEATSAICLDNSLLKSVSGADISNPHRQSVPAYAVDED*
Ga0066903_1080864241	3300005764	Tropical Forest Soil	MTYQKPEINKIAEASAAICLDNSLLKSVAGADIANPHRQTVPAY
Ga0070765_1014952521	3300006176	Soil	NKKEVIAMRYTKPEITRIAEATTAICLDNSLAKSIFGFDLTNPHRMTPVAYSADEE*
Ga0075424_1018389262	3300006904	Populus Rhizosphere	MTYRKPEINKIAEASLAICLDNSLLKSVSGADIANPHRQTVPAYAVDED*
Ga0075435_1003174822	3300007076	Populus Rhizosphere	MTYRKPEINKIAEASLAICLDNSLLKSVSGADIANPHRQ
Ga0126374_108591142	3300009792	Tropical Forest Soil	MTYQKPRINKIAEASTAICLDNSLLKSVSGADISNPHRQTVPAYAVDED*
Ga0126380_114120092	3300010043	Tropical Forest Soil	MTYRKPEINKIAEASSAICLDNSLLKSVAGADIANPHRQTVPAYAVDED*
Ga0074044_101641602	3300010343	Bog Forest Soil	MKYSKPEITKIAEAVNSICFDNSLTKAVIGRDLSNPHQMTPTAYSADED*
Ga0126370_102310522	3300010358	Tropical Forest Soil	MTYQKPEINKIAEASAAICLDNSLLKSVAGADIANPHRQTVPAYAVDED*
Ga0126376_110411422	3300010359	Tropical Forest Soil	MTYRKPEINKIAEASLAICLDNSLLKSVAGADIANPHRQTVPAYAVDED*
Ga0126372_102771654	3300010360	Tropical Forest Soil	MIYVRPQLNRITDATTAICLDNSLIKSIAGADLSNPHQMTPPAYSASDED*
Ga0126372_123322742	3300010360	Tropical Forest Soil	HHDRKEVMVMTYAKPEINRIAEATSAICLDNSLLKSVSGADISNPHRQSVPAYAVDED*
Ga0126377_113436802	3300010362	Tropical Forest Soil	MVMTYSKPEINKIAEATSAIRLDNSLQKSISGADLSNPHQQTAPAYAADED*
Ga0126379_101556442	3300010366	Tropical Forest Soil	MTYRKPEINKIAEASSAICLDNSLLKSVAGADIANPRRQTVPAYAVDED*
Ga0126381_1012976152	3300010376	Tropical Forest Soil	YRKPEINKIAEASSAICLDNSLLKSVAGADIANPHRQTVPAYAVDED*
Ga0137363_109101922	3300012202	Vadose Zone Soil	MTYAKPEINRIAEATSAICLDNSLTKSVSGADLSNPHQQTAPAYFDDGE*
Ga0137363_109101923	3300012202	Vadose Zone Soil	MTYVRPQLTRIADATTAICVDNSLIKSISGADLSNPHQMTPPAYSASDGD*
Ga0137399_107360082	3300012203	Vadose Zone Soil	MTYAKPEINRIADATSAICLDNSLTKSVSGADLSNPHQQTAPAYFDDEE*
Ga0137399_107360083	3300012203	Vadose Zone Soil	MTYVRPQLTRIADATTAICLDNSLIKSIAGADLSNPHQMTPPAYSASDED*
Ga0137396_111782602	3300012918	Vadose Zone Soil	MTYVRPQLTRIADATTAICLDNSLIKYIAGADLSNPHQMTPPAYSASDED*
Ga0137410_113179281	3300012944	Vadose Zone Soil	AMTYVRPQLTRIADATTAICLDNSLIKSIAGADLSNPHQMTPPAYSASDED*
Ga0126369_111040462	3300012971	Tropical Forest Soil	MSYAKPEIMKIADATAAICFGSTMSKSMAGADLSNPHQMTPPAYSVDEE*
Ga0182024_105270471	3300014501	Permafrost	KKGVIAMKYTKPEITRIAEATTAICLDNSLAKSILGFDLTNPHRMTPVAYSADEE*
Ga0132258_100171267	3300015371	Arabidopsis Rhizosphere	MNYCKPEITKIAEATTGIRLDSSLTKSVAGADLSNPHQMTAPAYAAADDD*
Ga0182035_115488531	3300016341	Soil	MTYAKPEINRIAEATSAICLDTALFKSVAGADLSNPHQMTPPAYAADED
Ga0182035_115488532	3300016341	Soil	RMTYSKPEINQMAEATSAICLDNALIKSVSGADLSNPHQQTAPAYAADED
Ga0182032_100613195	3300016357	Soil	TYQKPEINKIAEASSAICLDNSLLKSVAGADIANPHRQTVPAYAVDED
Ga0182037_107004672	3300016404	Soil	TYAKPEINRIAEATSAICLDTALFKSVAGADLSNPHQMTPPAYAADED
Ga0182038_120793521	3300016445	Soil	TYAKPEIMKIADATAAICLDSALSKSMAGADLSNPHQMTPPAYSADEE
Ga0187802_100532092	3300017822	Freshwater Sediment	VTYSKPQITKVAEATAAICLDNALIKSVSGADLSNPHQQTAPAYAADEE
Ga0187802_100532093	3300017822	Freshwater Sediment	MNYAKPEIAKIADATSAICLDNALTKSVAGADLSNPHQMTAPAYAATDED
Ga0187802_103703032	3300017822	Freshwater Sediment	MTYSKPEIAKIADATSAICLDNALIKSVSGADLSNPHEQTAPAYAADDE
Ga0187806_11741762	3300017928	Freshwater Sediment	VTYSKPQITKVAEATAAICLDNALIKSVFGADLSNPHQQTAPAYAADEE
Ga0187806_11741763	3300017928	Freshwater Sediment	MNYAKPEIAKIADATSAICLDNTLTKSVAGADLSNPHQMTAPAYAATDED
Ga0187801_104704421	3300017933	Freshwater Sediment	MTYAKPEIAKIAEATSAIRLDNPLTKSVAGADLSNPHQMTAPAYAATDED
Ga0187819_105694873	3300017943	Freshwater Sediment	MTYTKPEIAKIADATSAICLDNTLTKSVAGADLSNPHQMTAPAYAATDED
Ga0187781_101678754	3300017972	Tropical Peatland	MTYAKPEITRIAEATSAICLDNTLTKSVVGADLSNPHQMTAPAYTATEDD
Ga0187781_101678755	3300017972	Tropical Peatland	VTYPKPQITEVAEATEAICLDNTLIKSVAGADLSNPHQQTAPAYAADDE
Ga0187782_105739471	3300017975	Tropical Peatland	MTYAKPEITRIAEATSAICLDNTLTKSVVGADLSNPHQMTAPAYAATEDD
Ga0187782_105739472	3300017975	Tropical Peatland	MVTYSKPQITEVAEATEAICLDNTLIKSVAGADLSNPHQQTAPAYAADDE
Ga0187804_100787022	3300018006	Freshwater Sediment	MTYAKPEIAKIADATSAICLDNALTKSVAGADLSNPHQMTAPAYAATDED
Ga0187784_102630743	3300018062	Tropical Peatland	MTYAKPEITKIAEATSAICLDNTLTKSVAGADLSNPHQMTAPAYAATEDD
Ga0187784_102630744	3300018062	Tropical Peatland	VTYSKPQITKVAEATEAICLDNTLIKSVAGADLSNPHQQTAPAYAADDE
Ga0210407_114848701	3300020579	Soil	MTYERPKLSRIAEATTAICVDNSLIKSIAGADLSNPHQMTAPAYAAEDEG
Ga0210407_114848702	3300020579	Soil	MTYAKPEINRIAEATSAICLDNSLTKSVSGADLSNPHQQTAPAYFDDEE
Ga0210400_100349084	3300021170	Soil	MRYTKPEITKIAEATSAICLDNALIKSVAGADLSNPLQQTAPAYAADED
Ga0210400_100349085	3300021170	Soil	MTYAKPEITKIAEATSAICLDNALIKSVAGADLSNPNLMTPPAYSAADEE
Ga0210409_108461102	3300021559	Soil	MTYERPEINRIAEATTAICVDNSLIKSVSGADLSNPHQMTPPAYSASDED
Ga0242642_10795071	3300022504	Soil	QNRKEVTAMTYAKPEINRIAEATSAICLDNSLTKSVSGADLSNPHQQTAPAYFDDEE
Ga0242642_10795072	3300022504	Soil	MTYVRPQLTRIADATMAICLDNSLIKSIAGADLSNPHQMTPPAYSASDED
Ga0242653_10760121	3300022712	Soil	NHQNRKEVTAMTYAKPEINRIAEATSAICLDNSLTKSVSGADLSNPHQQTAPAYFDDEE
Ga0247668_11146861	3300024331	Soil	MNYCKPEITKIAEATTGIRLDSSLTKSVAGADLSNPHQMTAPAYAASDDD
Ga0207646_100547771	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TKIAAATSAICLDNALTKSVAGADLSNPRQMTAPAYFAADED
Ga0179593_11736343	3300026555	Vadose Zone Soil	MTYVRPQLTRIADATTAICLDNSLIKSIAGADLSNPHQMTPPAYSASDED
Ga0179587_111706461	3300026557	Vadose Zone Soil	MTYAKPEINRIAEATSAICLDNSLTKSVSGADLSNPHQQTAPAYFDDGE
Ga0209529_10358281	3300027334	Forest Soil	SHNKKGVIAVKYTKPEITRIAEATTAICLDNSLAKSIVGFDLTNPHRMTPPAYSADEE
Ga0209222_10070302	3300027559	Forest Soil	VIAVKYTKPEITRIAEATTAICLDNSLAKSIVGFDLTNPHRMTPPAYSADEE
Ga0209221_100008112	3300027609	Forest Soil	VKYTKPEITRIAEATTAICLDNSLAKSIVGFDLTNPHRMTPPAYSADEE
Ga0209330_10014454	3300027619	Forest Soil	MRYTKPEITRIAEATTAICLDNSLAKSIFGFDLTNPHRMTPVAYSADEE
Ga0209581_100111819	3300027706	Surface Soil	MTYSKPELCDIAEATAAICLDNALIKSVFGADLSNPHQQTAPAYAAEEE
Ga0209581_10728461	3300027706	Surface Soil	MTYSKPEINKIAEATSAICLDNVLAKSVIGADLSNPHQQTAPAYAVDED
Ga0209581_12631652	3300027706	Surface Soil	EVTAMSYTKPEITKIAEATTAIRFENALTKSVAGADLSNPHQMTPPAYSAEGD
Ga0209810_100179117	3300027773	Surface Soil	MTYSTPEINEIAEATSAICLDNPLIKSVFGADLSNPHQQTAPAYAAEDE
Ga0209006_100439472	3300027908	Forest Soil	MKYTKPEITRIAEATTAICLDNSLAKSILGFDLTNPHRMTPVAYSADEE
Ga0209526_101750651	3300028047	Forest Soil	MIYVKPELTRIAEATTAICVDNSLIKSIAGADLSNPHQMTPPAYSASDEE
Ga0209526_101750652	3300028047	Forest Soil	MTYTKPEINRIAEATSAICLDNSLTKSVSGADLSNPHQQTAPAYFDNEE
Ga0247689_10260311	3300028281	Soil	YCKPEITKIAEATTGIRLDSSLTKSVAGADLSNPHQMTAPAYAASDDD
Ga0311353_104499671	3300030399	Palsa	AVKYTKPEITRIAEATTAICLDNSLAKSIVGFDLTNPHRMTPPAYSADEE
Ga0170824_1067260461	3300031231	Forest Soil	LESRCPGSFHRKGKEVIAAMTYERPELTKIAEATTAICVDNSLIKSIAGADLSNPQHMTAPVYSASDED
Ga0170824_1127644431	3300031231	Forest Soil	MTYQRPELNRIAEATTAICVDNSLIKSIAGADLSNPHQMTPPAYSASDED
Ga0170824_1127644432	3300031231	Forest Soil	MTYAKPEINTIAEATSAIRLDNSLTKSVSGADLSNPHQQTPPAYFDDED
Ga0170824_1269424672	3300031231	Forest Soil	MTYAKPEINTIAEATSAIRLDNSLSKSVSGADLSNPHQQTPPAYFDDEE
Ga0170820_107926661	3300031446	Forest Soil	RKGKEVIAAMTYERPELTKIAEATTAICVDNSLIKSIAGADLSNPQHMTAPVYSASDED
Ga0318541_102571721	3300031545	Soil	MTYQKPEINKIAEASSAICLDNSLLKSVAGADIANPHRQTVPAYAVDED
Ga0318542_105908142	3300031668	Soil	SHCRKEVTAMTYAKPEIMKIADATAAICLDSALSKSMAGADLSNPHQMTPPAYSADEE
Ga0318494_108460442	3300031751	Soil	MTYSKPEIKHIAEATSAICLDNVLIKSVSGADLSNPHQQTVPAYAVDED
Ga0306925_104931912	3300031890	Soil	MTYAKPEIMKIADATAAICLDSALSKSMAGADLSNPHQMTPPAYSADEE
Ga0310913_107112421	3300031945	Soil	KPEIKHIAEATSAICLDNVLIKSVSGADLSNPHQQTVPAYAVDED
Ga0307479_101707612	3300031962	Hardwood Forest Soil	MTYAKPEINTIAEATSAIRLDNSLTKSVSGADLSNPQQQTAPAYFDDEE
Ga0307479_101707613	3300031962	Hardwood Forest Soil	MTYERPELTKIAEATTAICVDNSLIKSIAGADLSNPQHMTAPAYSASDED
Ga0307471_1006461462	3300032180	Hardwood Forest Soil	MTYVRPRLTRIADATTAICLDNSLIKSIAGADLSNPHQMTPPAYSASDED
Ga0307472_1021655601	3300032205	Hardwood Forest Soil	MTYAKPEINTMAEATSAIRFDNLLTKSVSGADLSNPQHQTAPAY
Ga0306920_1024167372	3300032261	Soil	MTYSKPEIRHIAEAISAICLDNALIKSVSGADLSNPHQQTVPAYAVDED
Ga0306920_1024167373	3300032261	Soil	MSYAKPEIGKIADAIAGICLDNALSKSMAGADLSNPHQMTPPAYSAEEE
Ga0335085_100524194	3300032770	Soil	VTYVKPQIVRIADATSAVCLDNALTKSVAGADLSNPHQMTAPAYSTTEE
Ga0335085_109935722	3300032770	Soil	TYAKPQIVRIADATSAVCLDNALTKSVAGADLSNPHQMTAPAYSTTEE
Ga0335082_107830522	3300032782	Soil	VTHVKPQIVRIADATSAVCLDNALTKSVAGADLSNPHQMTAPAYSTTEE
Ga0335079_116268641	3300032783	Soil	MTYAKPEIARIAEATSAIRLDNTLSKSVAGADLSNPHQMTAPAYAATDDH
Ga0335069_100549403	3300032893	Soil	MTYSKPEIAKIADAASAICLDNALIKSVSGADLSNPHEQTAPAYAADDE
Ga0335069_100549404	3300032893	Soil	VTYAKPQIVRIADATSAVCLDNALTKSVAGADLSNPHQMTAPAYSTTEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092390

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences