Metagenome / Metatranscriptome Family F092435

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092435
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	97 residues
Representative Sequence	MESKSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRGSEAYQVEIGTEVPHVGSAVGRA
Number of Associated Samples	80
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.24 %
% of genes near scaffold ends (potentially truncated)	97.20 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.944 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.495 % of family members)
Environment Ontology (ENVO)	Unclassified (42.056 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.50% β-sheet: 19.66% Coil/Unstructured: 53.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00158	Sigma54_activat	4.67
PF13185	GAF_2	4.67
PF13744	HTH_37	2.80
PF02585	PIG-L	1.87
PF07228	SpoIIE	1.87
PF00072	Response_reg	0.93
PF05368	NmrA	0.93
PF13474	SnoaL_3	0.93
PF12680	SnoaL_2	0.93
PF00440	TetR_N	0.93
PF02055	Glyco_hydro_30	0.93
PF02705	K_trans	0.93
PF13305	TetR_C_33	0.93
PF07885	Ion_trans_2	0.93
PF14559	TPR_19	0.93
PF14534	DUF4440	0.93
PF08241	Methyltransf_11	0.93
PF14310	Fn3-like	0.93
PF00561	Abhydrolase_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.87
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.93
COG5520	O-Glycosyl hydrolase	Cell wall/membrane/envelope biogenesis [M]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.94 %
Unclassified	root	N/A	42.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.94 %
Unclassified	root	N/A	42.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.94 %
Unclassified	root	N/A	42.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.36 %
Elusimicrobia	phylum	All Organisms → cellular organisms → Bacteria → Elusimicrobia	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.06 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.21 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.35 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %
unclassified Elusimicrobiota	no rank	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.06 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.06 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.06 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.93 %
Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.06 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.93 %
Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.06 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.35 %
Granulicella sp. S156	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	0.93 %
Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1026479	Not Available	568	Open in IMG/M
3300001159\|JGI12650J13346_1005181	Not Available	615	Open in IMG/M
3300004080\|Ga0062385_10260120	Not Available	973	Open in IMG/M
3300004082\|Ga0062384_100169485	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300004082\|Ga0062384_100290578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1010	Open in IMG/M
3300004082\|Ga0062384_101071595	Not Available	580	Open in IMG/M
3300004082\|Ga0062384_101324440	Not Available	528	Open in IMG/M
3300004091\|Ga0062387_101576845	Not Available	529	Open in IMG/M
3300004091\|Ga0062387_101697815	Not Available	513	Open in IMG/M
3300004092\|Ga0062389_100681519	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91	1200	Open in IMG/M
3300004092\|Ga0062389_102216590	Not Available	723	Open in IMG/M
3300004092\|Ga0062389_103294218	Not Available	605	Open in IMG/M
3300004635\|Ga0062388_101309655	Not Available	723	Open in IMG/M
3300004635\|Ga0062388_101617295	Not Available	659	Open in IMG/M
3300005467\|Ga0070706_101877153	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005471\|Ga0070698_101337914	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005554\|Ga0066661_10107272	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300005610\|Ga0070763_10381776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300005921\|Ga0070766_10010248	All Organisms → cellular organisms → Bacteria	4795	Open in IMG/M
3300005921\|Ga0070766_10038152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2653	Open in IMG/M
3300005921\|Ga0070766_10122673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1564	Open in IMG/M
3300006176\|Ga0070765_100196440	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300006176\|Ga0070765_100218212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1738	Open in IMG/M
3300006755\|Ga0079222_12114484	Not Available	557	Open in IMG/M
3300007982\|Ga0102924_1122699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	1255	Open in IMG/M
3300009143\|Ga0099792_10735152	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300012203\|Ga0137399_10730065	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300012205\|Ga0137362_10878227	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300012361\|Ga0137360_11065245	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300012362\|Ga0137361_11923634	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300014495\|Ga0182015_10846080	Not Available	574	Open in IMG/M
3300019888\|Ga0193751_1101627	Not Available	1105	Open in IMG/M
3300020062\|Ga0193724_1104804	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300020199\|Ga0179592_10328303	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300020580\|Ga0210403_10642310	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300020582\|Ga0210395_10168739	Not Available	1637	Open in IMG/M
3300020583\|Ga0210401_10880681	Not Available	754	Open in IMG/M
3300021168\|Ga0210406_10136383	All Organisms → cellular organisms → Bacteria → Acidobacteria	2065	Open in IMG/M
3300021168\|Ga0210406_10362971	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300021170\|Ga0210400_10636722	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300021401\|Ga0210393_11635143	Not Available	510	Open in IMG/M
3300021402\|Ga0210385_11314404	Not Available	554	Open in IMG/M
3300021404\|Ga0210389_10476145	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300021405\|Ga0210387_10224154	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
3300021405\|Ga0210387_10233813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1604	Open in IMG/M
3300021405\|Ga0210387_10332989	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300021407\|Ga0210383_11048531	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300021432\|Ga0210384_10282900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300021477\|Ga0210398_10399107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1121	Open in IMG/M
3300021559\|Ga0210409_10532948	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300021559\|Ga0210409_11561768	Not Available	536	Open in IMG/M
3300022533\|Ga0242662_10038882	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300024330\|Ga0137417_1306764	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300025320\|Ga0209171_10486669	Not Available	614	Open in IMG/M
3300026376\|Ga0257167_1061608	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300026467\|Ga0257154_1051923	Not Available	636	Open in IMG/M
3300026498\|Ga0257156_1110202	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300027064\|Ga0208724_1033885	Not Available	525	Open in IMG/M
3300027609\|Ga0209221_1002590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4521	Open in IMG/M
3300027633\|Ga0208988_1140025	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300027652\|Ga0209007_1002333	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5429	Open in IMG/M
3300027676\|Ga0209333_1116831	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300027698\|Ga0209446_1179744	Not Available	545	Open in IMG/M
3300027829\|Ga0209773_10309286	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300027829\|Ga0209773_10358353	Not Available	607	Open in IMG/M
3300027889\|Ga0209380_10027374	All Organisms → cellular organisms → Bacteria	3214	Open in IMG/M
3300027889\|Ga0209380_10158157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300027889\|Ga0209380_10428586	Not Available	774	Open in IMG/M
3300027895\|Ga0209624_10562035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300028047\|Ga0209526_10466694	Not Available	828	Open in IMG/M
3300028747\|Ga0302219_10373483	Not Available	557	Open in IMG/M
3300028906\|Ga0308309_10042305	All Organisms → cellular organisms → Bacteria → Acidobacteria	3224	Open in IMG/M
3300029910\|Ga0311369_11521787	Not Available	501	Open in IMG/M
3300029951\|Ga0311371_12190026	Not Available	577	Open in IMG/M
3300030007\|Ga0311338_10106525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3466	Open in IMG/M
3300030007\|Ga0311338_10718780	Not Available	1007	Open in IMG/M
3300030053\|Ga0302177_10355333	Not Available	773	Open in IMG/M
3300030057\|Ga0302176_10141712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	951	Open in IMG/M
3300030399\|Ga0311353_11327547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	589	Open in IMG/M
3300030503\|Ga0311370_11799402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	623	Open in IMG/M
3300030520\|Ga0311372_12455192	Not Available	588	Open in IMG/M
3300030617\|Ga0311356_10931917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	816	Open in IMG/M
3300030618\|Ga0311354_10306218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1641	Open in IMG/M
3300030998\|Ga0073996_12020303	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300031023\|Ga0073998_10029758	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031057\|Ga0170834_100413406	Not Available	940	Open in IMG/M
3300031057\|Ga0170834_104655268	Not Available	596	Open in IMG/M
3300031231\|Ga0170824_114759124	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300031231\|Ga0170824_120514352	Not Available	677	Open in IMG/M
3300031233\|Ga0302307_10495928	Not Available	618	Open in IMG/M
3300031236\|Ga0302324_101038980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1109	Open in IMG/M
3300031236\|Ga0302324_102594775	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031708\|Ga0310686_100422676	Not Available	599	Open in IMG/M
3300031708\|Ga0310686_113334904	Not Available	671	Open in IMG/M
3300031715\|Ga0307476_10403569	Not Available	1009	Open in IMG/M
3300031718\|Ga0307474_10170063	Not Available	1651	Open in IMG/M
3300031718\|Ga0307474_10175755	All Organisms → cellular organisms → Bacteria → Acidobacteria	1623	Open in IMG/M
3300031718\|Ga0307474_10832312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300031753\|Ga0307477_10600411	Not Available	742	Open in IMG/M
3300031754\|Ga0307475_10426167	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300031823\|Ga0307478_10370721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300031823\|Ga0307478_11136483	Not Available	651	Open in IMG/M
3300031823\|Ga0307478_11691486	Not Available	521	Open in IMG/M
3300031962\|Ga0307479_10737253	Not Available	963	Open in IMG/M
3300031962\|Ga0307479_11663681	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032205\|Ga0307472_101185769	Not Available	728	Open in IMG/M
3300034163\|Ga0370515_0019932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3093	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.11%
Aquatic	Environmental → Aquatic	15.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.09%
Freshwater	Environmental → Aquatic → Freshwater	14.02%
Peat	Environmental → Terrestrial → Peat	14.02%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.60%
Loam	Environmental → Terrestrial → Soil → Loam	19.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.02%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.28%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	14.02%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.02%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.74%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001159	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10264791	3300001084	Forest Soil	VREMEARSAADGRYRTLLEVSGAIASQPNLKAVLRSLRGLLSSIVAFDSVSLCLLSDKGNSVRLMAFDRDPEAHHVEIGTEVPHAGSAVGRAIDEQNPVYIP
JGI12650J13346_10051812	3300001159	Forest Soil	MESRSAADGRYRTLLEVSGAIASQPNLKAVLHSLRRLLSSVVAFDSVSLSLLSDNGKSVRLIAFDRGSEAYQVEIGTEFPHVGSAVGRALDEQKPIYIPDLQAELSKIPQLASQ
Ga0062385_102601202	3300004080	Bog Forest Soil	MPAGEMESKSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLV
Ga0062384_1001694853	3300004082	Bog Forest Soil	MESKSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLVAF
Ga0062384_1002905783	3300004082	Bog Forest Soil	VGEMESKRAADGRYRTLLEVSGAIASEPNLQAVLQSLRRLLSSVVAFDSISLCLLSDNGNSVRLVAFDRSPDAHQVDIGTEVPHVGSAVGRAIDEQKPIYIHDLQAELSRIPQL
Ga0062384_1010715951	3300004082	Bog Forest Soil	MPVGVMESRSAGGGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVGAFDSVSLSLLSNHGNSVRLMAFDRSPEAHQVEIGTEVPHLG
Ga0062384_1013244401	3300004082	Bog Forest Soil	MEARSAADGRYRTLLEVSGAIASQPNLQAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRSPEAYHVELGTEVSHVGTAVGRAIDEQKPIYI
Ga0062387_1015768451	3300004091	Bog Forest Soil	MESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSISLSLLSDHGNSVRLIAFDRGSDA
Ga0062387_1016978151	3300004091	Bog Forest Soil	MPVGVMESRSAGDGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLADNGTSVRLIAFDRSPEAYQVE
Ga0062389_1006815191	3300004092	Bog Forest Soil	VREMESRSAVDGRYRTLLEVSGAIASQPNLQAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLTAFDRSPDAHQVDIGTEVPHKGSAVGRAIDEQKPIYIPDLQAE
Ga0062389_1022165901	3300004092	Bog Forest Soil	VGVMESRSAGGGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVGAFDSVSLSLLSNHGNSVRLMAFDRSPEAHQVEIGTEVPHLG
Ga0062389_1032942181	3300004092	Bog Forest Soil	VGVMESRSAADGRYRTLIEVSGAVASQPNLKAVLQSLRRLLSSVVTFDSVSLSMLSDNGNSIRLIAFDRSPEAHQVEVGT
Ga0062388_1013096551	3300004635	Bog Forest Soil	MESRSAGGGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVGAFDSVSLSLLSNHGNSVRLMAFDRSPEAHQVEIGTEVPHLG
Ga0062388_1016172951	3300004635	Bog Forest Soil	VGVESRSTADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVPFDSASLSLLSDNGNSVRLIAF
Ga0070706_1018771531	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSFQQAALLNMPVGEMESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSRVVAFDSIGLLLLSDDGNSVQLIALD
Ga0070698_1013379141	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPVGEMESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSRVVAFDSIGLLLLSDDGNSVQLIALDRGPEA
Ga0066661_101072721	3300005554	Soil	LLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGNSVQLIALDRGPEAHEVEIGTEVRHAGTAVGRAIDEQKPIYIPDQQAEISRIP
Ga0070763_103817761	3300005610	Soil	MPAGEMESQSAADSRYRTLLEVSGAIASQPNLKTVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRVIAFDRGSEAYQVEIGTEVPH
Ga0070766_100102481	3300005921	Soil	VREMVSRSAVDGRYRTLLEVSGAIASQPSLQAVLQSLRPLLSSVVAFDSVSLSLLSDKGSSVRLIAFDRSPEAYQVELGTEVSHVGTAVGRAIDEQKPIYIPDLQ
Ga0070766_100381521	3300005921	Soil	MESKSAADGRYRTLLEVSGAIASQPNLKALLQSLRRLLSSVVAFDSVSLSLLSDSGNSVRVVAFDRSPEAHAVDVGTEVPHAGIAIGRAIDEQKPIYIPDLQAELSKIP
Ga0070766_101226733	3300005921	Soil	VGEMESKSGTDGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLIAFDRSPEALQVEVGTEVPHAGSALGRAIDEQKPIYIPDLQAEMSKFPQLASQARLAIPHSAYIFPISISG
Ga0070765_1001964402	3300006176	Soil	MPIGELESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSQVVAFDSIGLLLLSDNGSSVRLVAFDRSPEAREFEIGTQVPYAGTA
Ga0070765_1002182121	3300006176	Soil	MLVGEMESKSGTDGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLIAFDRSPEALQVELGTEVPHLGSAVGRAIDEQKPIYIPDLQAELSRIPQLASQAKLRIPHSAYIFPISIS
Ga0079222_121144841	3300006755	Agricultural Soil	MESKSAADSRYRTLLEVSGAIASQPNLKAVLQSLRRLLSRVVAFDSVSLSLLSNNGSSVRLIAFERGSE
Ga0102924_11226991	3300007982	Iron-Sulfur Acid Spring	MPVGEMESKRAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLIAFDRSPE
Ga0099792_107351522	3300009143	Vadose Zone Soil	MPISEMESRSAADGRYRTLLEVSGAIAAQPNFKAVLESLRRLLSRVVAFDSIGLLLLSDNGNSVQLIALDRGPEAYEVAIGTVVTHAGTAVGRAIDEQKPIYVPDQQTEISR
Ga0137399_107300652	3300012203	Vadose Zone Soil	VTFQQAALLNMPVGETESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGNSVQLIALDRGPEAHEVEIGTEVRHAGTAVGRAIDEQKPIYVPDQQTEISRIPQLASKVRLGTPHSAYIFPIST
Ga0137362_108782271	3300012205	Vadose Zone Soil	MESRSATDGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGNSVQLIALDRGPEAHEVEIGTEVRHAGTAVGRAIDEQKPVYIPDQQAEISRIPQL
Ga0137360_110652452	3300012361	Vadose Zone Soil	MPVGEIESRSATDGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSSGHLLLSDNGNSVQLIALDRGPEAHEVEIGTEVPHAGTAVGQAIDEQAPIYVPDQQTEIARIPQLAKKVTLG
Ga0137361_119236341	3300012362	Vadose Zone Soil	MPVGETESRSARDGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGNSVQLIALDRGPEAHEVEIGTEVRHAGTAVGRAIDEQKPVYIPDQQAEISRIPQL
Ga0182015_108460801	3300014495	Palsa	MPGGEMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRSPEAHQVAIGTEVPHLGNSVGRAIDEQKPIYVPDLQAEL
Ga0193751_11016272	3300019888	Soil	VSEMESRSAADGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVVAFDSVDLCLLSDNGNSVRLMAFDRSPEAHQVEIGTEVPHAGSAAGRAIDEQKPIYVPDLQAELSRIPQLA
Ga0193724_11048041	3300020062	Soil	MESRSAADGRYRTLLEVSGAIAAQPNFKAVLQSLRRLLSKVVAFDSIGLLLLSDNGSSVQLIAFDRG
Ga0179592_103283032	3300020199	Vadose Zone Soil	MPVGQMESRSATDGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGNSVQLIALDRGPEAHEVEIGTE
Ga0210403_106423102	3300020580	Soil	VREMEARSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDDGNSVRLIAFDRSLEALQ
Ga0210395_101687394	3300020582	Soil	VREMVSRSAVDGRYRTLLEVSGAIASQPSLQAVLQSLRPLLSSVVAFDSVSLSLLSDKGSSVRLIAFDRSPEAYQVELGT
Ga0210401_108806811	3300020583	Soil	VGELESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLIAFDRSP
Ga0210406_101363831	3300021168	Soil	MPVSEMESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSRVVAFDSISLLLLSDNGSSVQLIAF
Ga0210406_103629712	3300021168	Soil	MPVSEMESRSATDGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGNSVQLIALDRGPEAYEVEIGTEVSHAGTAVGRALDEQKPIYVPDQQAEIARIPQLASKVRIGTPHSAYIFPVSTSG
Ga0210400_106367221	3300021170	Soil	MPIGELESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSQVVAFDSIGLLLLSDNGSSVRLVAFDRSPEAREFEIGTQVPYAGTAVGRAIEEQKPIYIAD
Ga0210393_116351431	3300021401	Soil	VAVMESRSVGDGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDDGTSVRLIAFDRSPEAHQVEI
Ga0210385_113144041	3300021402	Soil	MESKSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRGSEAYQVEIGTEVPHVGSAVGRALDEQKPIYIPDLQAELSKIPQLAAQARLSTPHSAYIFPISIS
Ga0210389_104761452	3300021404	Soil	MESKSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRGSEAYQVEIGTEVPHVGSAVGRA
Ga0210387_102241541	3300021405	Soil	VGVMEPRSAGDGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRSPQAYQVEIGTEVQHLGTAVGRAIDEQKPIYVP
Ga0210387_102338133	3300021405	Soil	LLEVSGAIASQPNLKTVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRVIAFDRGSEAYRVEIGTEVPHVGSAVGKALDEQKPIYIP
Ga0210387_103329891	3300021405	Soil	MPIDEMESRSAADGRYRTLLEVSGAIATQPNWKAGLQSLRRLLSSVVAFDSVGLLLLSDNGNSVRLTAFDRDPEADEFEI
Ga0210383_110485311	3300021407	Soil	MPVGELESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSRVVAFDSIGLLLLSDDGNSVQLIALDRGPEAYEVEIGTEVPHAGTAVGRAIDEQKPIYI
Ga0210384_102829001	3300021432	Soil	MESQSAADSRYRTLLEVSGAIASQPNLKTVLQSLRRLLSSVVAFDSVNLSLLSDNGNSVRVIAFDRGSEAYRVEIGTEVPHVGSAVGKALDEQKPIYIPDLQAELSKIPQLASQARLSTPHSAYI
Ga0210398_103991071	3300021477	Soil	VREMVSRSAVDGRYRTLLEVSGAIASQPSLQAVLQSLRHLLSSVVAFDSVSLSLLSDKGSSVRLIAFDRSPEAYQVELGT
Ga0210409_105329481	3300021559	Soil	MESKSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSRVVAFDSVSLSLLSNNGSSVRLIAFERGSEA
Ga0210409_115617681	3300021559	Soil	MPAGEMESQSAADSRYRTLLEVSGAIASQPNLKTVLQSLRRLLSSVVAFDSVNLSLLSDNGNSVRVIAFDRGSEAYRVEIGTEVPHVGSAVGKALDEQK
Ga0242662_100388821	3300022533	Soil	MPIGELESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSQVVAFDSIGLLLLSDNGSSVQLIAFDRSPGAREFEIGTQVPYA
Ga0137417_13067644	3300024330	Vadose Zone Soil	MPVGEMESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGNSVQLIALDRGPEAHEVEIGTEVRHAGTAVGRAIDEQKPIYVPDQQAEISRIPQLHRRS
Ga0209171_104866691	3300025320	Iron-Sulfur Acid Spring	MPAGEVETKSATDGRYRTLLEVSGAIASQPNLMAILQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLIAFDRGSEAYQVEIGTEVPHAGSAVGRALEEQKPIYIPDLQAELS
Ga0257167_10616081	3300026376	Soil	MPIGELESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGSSVQLIAFDRSPE
Ga0257154_10519231	3300026467	Soil	MESKSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSISLSLLSDNGNSLRLIAFDRGSEAYQVEIGTEVPHVGSAVGRALDEQKPIYIPDLQAELSKIPQLASQARLGTPHSAY
Ga0257156_11102021	3300026498	Soil	MPISEMESRSAADGRYRTLLEVSGAIAAQPNFKAVLESLRRLLSRVVAFDSIGLLLLSDNGNSVQLIALDRGPEAYEVAI
Ga0208724_10338851	3300027064	Forest Soil	MPIDEMESRSAADGRYRTLLEVSGAIATQPNWKAALQSLRRLLSSVVAFDSVGLLLLSDNGNSVRLTAFDRDPEADEFEIGTQVPHAGTAV
Ga0209221_10025905	3300027609	Forest Soil	MPAGEMESKSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVAAFDSVSLSLLSDNGNSVRLIAFDRGSEAYQVEIG
Ga0208988_11400252	3300027633	Forest Soil	VTFQQAALLNMPVGETESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGNSVRLVAFDRGPEAHQVEINTEVPHLGTAVGRAIDE
Ga0209007_10023331	3300027652	Forest Soil	MESKSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRGSEAYQVEIGTEVPHVGSAVGRALDEQKPIYIPDLQAELSKIPQLASQVRLGTP
Ga0209333_11168312	3300027676	Forest Soil	VGVMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSIRVIAFDRGPEAYQVEIGFECPHVGTAIGRAIDEQK
Ga0209446_11797441	3300027698	Bog Forest Soil	MPAGEMESKSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLVAFDRSPDAHQVDIGTEVPHVGSAVGRAIDEQKP
Ga0209773_103092861	3300027829	Bog Forest Soil	VREMESRSAVDGRYRTLLEVSGAIASQPNLQAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLTAFDRSPDAHQVDIGTEVPHKGSAVG
Ga0209773_103583531	3300027829	Bog Forest Soil	VGVMESRSAGDGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLADNGTSVRLIAFDRSPEAYQVEIGTEVQHLGTAVGRA
Ga0209380_100273747	3300027889	Soil	VREMVSRSAVDGRYRTLLEVSGAIASQPSLQAVLQSLRPLLSSVVAFDSVSLSLLSDKGSSVRLIAFDRSPEAYQVELGTEVSHVGTAVGRAIDEQKPIYIPDLQAELSRIPQL
Ga0209380_101581572	3300027889	Soil	MPAGEMESQSAADSRYRTLLEVSGAIASQPNLKTVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRVIAFDRGSEAYQVEIGTEVPHVGSAVGRALDEQKPIYIADLQAELSKIP
Ga0209380_104285861	3300027889	Soil	MPAGEMESKSAADGRYRTLLEVSGAIASQPNLKALLQSLRRLLSSVVAFDSVSLSLLSDSGNSVRVVAFDRSPEAHAVDVGTEVPHAGIAIGRAIDEQKPIYIPDLQAELSKIPQLASQARFGVPHS
Ga0209624_105620352	3300027895	Forest Soil	MESKSATDGRYRTLLEVSDAIASQPNLKAVLQSLRRLLSSVVVFDSVSLSLLIDKGNSVRLIAFDRGSEA
Ga0209526_104666941	3300028047	Forest Soil	MESTSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLIAFDRGSEAYQVEIGTEVPQVGSG
Ga0302219_103734831	3300028747	Palsa	VGVMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRSPEAHHVE
Ga0308309_100423051	3300028906	Soil	MPIDEIESRSAADGRYRTLLEVCGAIAKQPNWKAALQSLRRLLSSVVAFDSVGLLLLSDNGNSVRLTAFDRDPEADEFEIGTQVPHAGTAVGRAIDEQKPIYVPDVKTELSM
Ga0311369_115217871	3300029910	Palsa	VSEMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLASVVAFDSVSLSLLSDSGDSVRLIAFDRSPEAHQVEIGTEVPHLGNAVGRAIDEQKPIYVPDLQAEISRIPQLASQAKLRTPHSAYIFPIS
Ga0311371_121900262	3300029951	Palsa	VGVMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRSPEAHQAEIGTEVQHLGTAVGRAIDEQKPIYVPDLQ
Ga0311338_101065255	3300030007	Palsa	VGVMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDR
Ga0311338_107187801	3300030007	Palsa	VSEMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLASVVAFDSVSLSLLSDSGDSVRLIAFDRSPEAHQVEIGTEVP
Ga0302177_103553332	3300030053	Palsa	VGVMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRSPEAHQAEIGTEVQHLGTAVGRAIDEQKPIYVPDLQAELSRIPQLASQAKLRVPHSAYIFPISISGK
Ga0302176_101417121	3300030057	Palsa	VGVMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRSPEAHQAEIGTEVQHLGTAVGRAIDEQKPIYVPDLQAELSRIPQLASQAKLRVP
Ga0311353_113275471	3300030399	Palsa	MPVGVMESRSAGDGRYRTLLEVSSAIASQPNLKAVLQSLRRLLASVVAFDSVSLSLLSDSGDSVRLIAFDRSPEAHQVEIGTEVPHL
Ga0311370_117994022	3300030503	Palsa	MPVGVMESRSAGDGRYRTLLEVSSAIASQPNLKAVLQSLRSLLSSVVPFDSVSLSLLADNGNSVRLIAFDRGPEAYQVEIGTEVPHSGTAVGRAIDE
Ga0311372_124551921	3300030520	Palsa	MESRSAGDGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDSGDSVRLIAFDRSPEAHQVEIGTEVPH
Ga0311356_109319171	3300030617	Palsa	VGVMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLASVVAFDSVSLSLLSDSGDSVRLIAFDRSPEAHQVEIGTEVPHL
Ga0311354_103062181	3300030618	Palsa	VGVMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRSPEAHQAEIGTEVQHLGTAVGRAIDEQKPIYVPDLQAELSRIPQLASQAKLRVPHS
Ga0073996_120203032	3300030998	Soil	MPVGEMESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGNSVQLIALDRGPEAHEVEIGTEARLEAIALGRSDRAMAVEVRGAHSFNRI
Ga0073998_100297582	3300031023	Soil	MPIGELESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSEVVAFDSIGLLLLSDNGSSVQLIAFDRSPEAREFEIGTQVPYAGTAVGR
Ga0170834_1004134062	3300031057	Forest Soil	MVRPFSILTAGQEGAISEHLQMPIDEMESRSAADGRYRTLLEVPGAIATQPDWKAALQSLRRLLSSVVAFDSVGLLLLSDNGNSVRLTAFDRDPKADEFEIGTQVPHAGTAVGRAIDE
Ga0170834_1046552681	3300031057	Forest Soil	VGEMESRSAADGRYRTLLEVSDAIATQPNLKAVLQSLRRLLSSVVAFDSASLSLLSDNGNSVRLIAFDRSPEAHQVEIGTEVPH
Ga0170824_1147591242	3300031231	Forest Soil	ATQPDWKAALQSLRRLLSSVVAFDSVGLLLLSDNGNSVRLTAFDRDPKADEFEIGTQVPHAGTAVGRAIDE
Ga0170824_1205143521	3300031231	Forest Soil	VGEMESRSAADGRYRTLLEVSDAIATQPNLKAVLQSLRRLLSSVVAFDSASLSLLSDNGNSVRLIAFDRSPEAHQVEIGTEVPHFGTAVGRAIDEQKP
Ga0302307_104959282	3300031233	Palsa	MPVGEMESRSAADGRYRALLEVSGAIASQPSLQAVLQSLRHLLSSVVAFDSVSLSLLSDNGNSVRVIAFDRSPEAHEVEVGTEVPHAGIAVGRAIDEQKPIYV
Ga0302324_1010389801	3300031236	Palsa	MESRSAGDGRYRTLLEVSSAIASQPNLKAVLQSLRSLLSSVVPFDSVSLSLLADNGNSVRLIAFDRGPEAYQVEIGTEVPHSGTAVGRAIDEQKPIYVPDLQAELSRIPQLAS
Ga0302324_1025947751	3300031236	Palsa	VGVMESKSAGDGRYRTLLEVSSAIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLADDGNSVRLIAFDRSPEAYQVEIGTEVQHLG
Ga0310686_1004226761	3300031708	Soil	VSEMESRSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLASVVAFDSVSLSLLSDSGDSVRLIAFDRSPEAHQVEIGTEVPHLGNAVGR
Ga0310686_1133349042	3300031708	Soil	VREMESRRAADGRYRTLLEVSGAIASQPNLQAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLVAFDRSPEAHQVDVGTEVPHVGSA
Ga0307476_104035692	3300031715	Hardwood Forest Soil	VGQMESRSAADGRYRALLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLVAFDRGSDALQVEVGTEVPHAGSAVGRAIDEQSPIYIPDLEAELSRIPQLASQAKLPTPHSA
Ga0307474_101700632	3300031718	Hardwood Forest Soil	MLAGEMESESATDGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLIAFDRSPEAFQVEVGTEVPHVGSAVGRAIDEQKPIYIPDLQAE
Ga0307474_101757553	3300031718	Hardwood Forest Soil	MPARQMESKSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSISLSLLSDHGNSVRLIAFDRGSEAYQIEIGTEVPHVGSAVGRALDEQKPIYIPD
Ga0307474_108323121	3300031718	Hardwood Forest Soil	MPAGEMESKSGADSRYRTLLEVSGVIASQPNLKAVLQSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRGSEAYQVEIGTEVPHVGS
Ga0307477_106004111	3300031753	Hardwood Forest Soil	MESKSAADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSRVVAFDSVSLSLLSNNGSSVRLIAFERGSEAYQVE
Ga0307475_104261672	3300031754	Hardwood Forest Soil	MPVGEMESRSAADGRYRTLLEVSGAIAAQPNLKAVLQSLRRLLSRVVAFDSIGLLLLSDDGNSVQLIALDRGPEAYEVEIGTEVPHAGTAVGQAID
Ga0307478_103707212	3300031823	Hardwood Forest Soil	MPAGEMESRSAADGRYRTLLEVSGAIASQPNLKAVLHSLRRLLSSVVAFDSVSLSLLSDNGNSVRLIAFDRASEAYQVEIGTEVPHVGTAVGR
Ga0307478_111364832	3300031823	Hardwood Forest Soil	VGQMESRSAADGRYRALLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLVAFDRGSDALQVEVGTEVPHAGSAVGRAIGEQNPIY
Ga0307478_116914861	3300031823	Hardwood Forest Soil	VGEMESKSATDGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSSVVAFDSVSLCLLSDNGNSVRLIAFDRSPEALQVELGTEVPHLGSAVGRAIDEQKPIYIPDLQAELSK
Ga0307479_107372531	3300031962	Hardwood Forest Soil	MESKSAADGRYRALLEVSGAIASQPNLKAVLQSLRRLLSRVVAFDSVSLSLLSNNGSSVRLIAFERGSEAYQVEIGTEVPHVGSAVGRALDEQKPI
Ga0307479_116636812	3300031962	Hardwood Forest Soil	VTFQQAALLNMPIGEMESRSAADGRYRTLLEVSGVIAAQPNLKAVLQSLRRLLSKVVAFDSIGLLLLSDNGSSVQLIALDRGPDAYEVEIGTEVPHAGTAVGRAIDEQKPIYVPDQHTEIARIPQLASKVRLGTPHSAY
Ga0307472_1011857691	3300032205	Hardwood Forest Soil	MPVDEMVSRSGADGRYRTLLEVSGAIASQPNWKVVLQSLRRLLSSVVAFDSLSLCLLSDKGTSIRLIAFDRSAEAYQVEIGTEVPHAGIAVGRAIDEQKPTYIPDLQ
Ga0370515_0019932_1_243	3300034163	Untreated Peat Soil	MGVMESRSVADGRYRTLLEVSGAIASQPNLKAVLQSLRRLLSNVVAFDSVSLSLLSDNGNSVRLIAFDRSPEAHQVEIGTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092435

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences