NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F092491

Metagenome / Metatranscriptome Family F092491

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092491
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 109 residues
Representative Sequence TVWDIMAWVVVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Number of Associated Samples 97
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.57 %
% of genes near scaffold ends (potentially truncated) 37.38 %
% of genes from short scaffolds (< 2000 bps) 90.65 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (72.897 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(17.757 % of family members)
Environment Ontology (ENVO) Unclassified
(31.776 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.009 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 53.96%    β-sheet: 0.00%    Coil/Unstructured: 46.04%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF04545Sigma70_r4 44.86
PF02634FdhD-NarQ 32.71
PF13193AMP-binding_C 2.80
PF00753Lactamase_B 1.87
PF02776TPP_enzyme_N 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG1526Formate dehydrogenase assembly factor FdhD, a sulfurtransferaseEnergy production and conversion [C] 32.71

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.90 %
UnclassifiedrootN/A27.10 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004139|Ga0058897_10081399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales916Open in IMG/M
3300005329|Ga0070683_101604387All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300005332|Ga0066388_105278693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales655Open in IMG/M
3300005337|Ga0070682_100939017Not Available714Open in IMG/M
3300005337|Ga0070682_101690488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales549Open in IMG/M
3300005341|Ga0070691_10244726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales959Open in IMG/M
3300005364|Ga0070673_100022987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura4548Open in IMG/M
3300005366|Ga0070659_100157868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1853Open in IMG/M
3300005434|Ga0070709_10203156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1404Open in IMG/M
3300005434|Ga0070709_10561514Not Available874Open in IMG/M
3300005435|Ga0070714_100338178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1411Open in IMG/M
3300005435|Ga0070714_100469925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1196Open in IMG/M
3300005437|Ga0070710_11138242All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300005439|Ga0070711_101371765Not Available614Open in IMG/M
3300005455|Ga0070663_100122845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1963Open in IMG/M
3300005458|Ga0070681_11034262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales741Open in IMG/M
3300005468|Ga0070707_100144378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2316Open in IMG/M
3300005471|Ga0070698_102063255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales524Open in IMG/M
3300005536|Ga0070697_101485230Not Available606Open in IMG/M
3300005549|Ga0070704_101015836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales750Open in IMG/M
3300005574|Ga0066694_10045155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1995Open in IMG/M
3300005718|Ga0068866_11406448Not Available510Open in IMG/M
3300005843|Ga0068860_102776904Not Available508Open in IMG/M
3300006028|Ga0070717_12040213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales516Open in IMG/M
3300006046|Ga0066652_101342047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales672Open in IMG/M
3300006175|Ga0070712_100428581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1097Open in IMG/M
3300006175|Ga0070712_101143166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales676Open in IMG/M
3300006176|Ga0070765_101526690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales628Open in IMG/M
3300006358|Ga0068871_100075451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2783Open in IMG/M
3300006804|Ga0079221_10145617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1232Open in IMG/M
3300006854|Ga0075425_101872035Not Available673Open in IMG/M
3300006954|Ga0079219_11809423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia572Open in IMG/M
3300009012|Ga0066710_104425607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia525Open in IMG/M
3300009093|Ga0105240_11061070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria864Open in IMG/M
3300009162|Ga0075423_10108872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2901Open in IMG/M
3300009545|Ga0105237_11287865All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300010154|Ga0127503_10522715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales702Open in IMG/M
3300010358|Ga0126370_11034076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales752Open in IMG/M
3300010362|Ga0126377_10717324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1054Open in IMG/M
3300010371|Ga0134125_10094423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3328Open in IMG/M
3300010371|Ga0134125_12275809Not Available589Open in IMG/M
3300010373|Ga0134128_10821752Not Available1030Open in IMG/M
3300010373|Ga0134128_11800243Not Available674Open in IMG/M
3300010401|Ga0134121_10934006Not Available846Open in IMG/M
3300010856|Ga0126358_1167643Not Available608Open in IMG/M
3300010861|Ga0126349_1017274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales586Open in IMG/M
3300010861|Ga0126349_1018547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales727Open in IMG/M
3300011120|Ga0150983_12638019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales605Open in IMG/M
3300012200|Ga0137382_10043829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2759Open in IMG/M
3300012201|Ga0137365_10673932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria756Open in IMG/M
3300012206|Ga0137380_10495970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1076Open in IMG/M
3300012207|Ga0137381_10337148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1314Open in IMG/M
3300012349|Ga0137387_10597562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales800Open in IMG/M
3300012349|Ga0137387_10878734Not Available649Open in IMG/M
3300012356|Ga0137371_10143707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1870Open in IMG/M
3300012492|Ga0157335_1000642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1665Open in IMG/M
3300012955|Ga0164298_10860709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales655Open in IMG/M
3300012960|Ga0164301_10462861All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria905Open in IMG/M
3300012961|Ga0164302_10267310Not Available1096Open in IMG/M
3300012985|Ga0164308_10503929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1013Open in IMG/M
3300012986|Ga0164304_11059035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales646Open in IMG/M
3300013308|Ga0157375_11070951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria943Open in IMG/M
3300014968|Ga0157379_11596099Not Available637Open in IMG/M
3300014969|Ga0157376_10137504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2188Open in IMG/M
3300015372|Ga0132256_100890870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1006Open in IMG/M
3300015373|Ga0132257_100322742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1860Open in IMG/M
3300020062|Ga0193724_1017400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1526Open in IMG/M
3300020069|Ga0197907_11255889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales811Open in IMG/M
3300020070|Ga0206356_10158407Not Available648Open in IMG/M
3300020140|Ga0179590_1014070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1786Open in IMG/M
3300020579|Ga0210407_10914840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales672Open in IMG/M
3300020580|Ga0210403_10179554Not Available1735Open in IMG/M
3300021178|Ga0210408_10177664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1690Open in IMG/M
3300021403|Ga0210397_11328689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales558Open in IMG/M
3300021432|Ga0210384_11879680Not Available504Open in IMG/M
3300021478|Ga0210402_10305710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis1472Open in IMG/M
3300021478|Ga0210402_10380971Not Available1309Open in IMG/M
3300022724|Ga0242665_10311271Not Available554Open in IMG/M
3300024245|Ga0247677_1033481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales741Open in IMG/M
3300024254|Ga0247661_1020155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1163Open in IMG/M
3300024283|Ga0247670_1016767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1314Open in IMG/M
3300025735|Ga0207713_1172180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales682Open in IMG/M
3300025898|Ga0207692_10315974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria954Open in IMG/M
3300025898|Ga0207692_11018049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia547Open in IMG/M
3300025903|Ga0207680_11174958Not Available547Open in IMG/M
3300025906|Ga0207699_10071382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura pelletieri2123Open in IMG/M
3300025912|Ga0207707_11410176All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300025916|Ga0207663_10782680All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300025922|Ga0207646_10282644All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1499Open in IMG/M
3300025927|Ga0207687_10743116Not Available835Open in IMG/M
3300025928|Ga0207700_10918909Not Available783Open in IMG/M
3300025929|Ga0207664_10906654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria791Open in IMG/M
3300025931|Ga0207644_10096568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura2212Open in IMG/M
3300025939|Ga0207665_11628020All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300025942|Ga0207689_10007119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9834Open in IMG/M
3300025945|Ga0207679_11814302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales557Open in IMG/M
3300025981|Ga0207640_11226557Not Available668Open in IMG/M
3300026095|Ga0207676_11174512Not Available760Open in IMG/M
3300031226|Ga0307497_10251604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria790Open in IMG/M
3300031231|Ga0170824_109132884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales602Open in IMG/M
3300031740|Ga0307468_101164905Not Available692Open in IMG/M
3300031820|Ga0307473_10823890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales664Open in IMG/M
3300032174|Ga0307470_10418420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria953Open in IMG/M
3300032180|Ga0307471_101576960Not Available813Open in IMG/M
3300032205|Ga0307472_100757107Not Available881Open in IMG/M
3300032770|Ga0335085_11676815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia656Open in IMG/M
3300032828|Ga0335080_12323016Not Available513Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere17.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.28%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.54%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.67%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.67%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.67%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.80%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil2.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.87%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.87%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.87%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010856Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012492Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610Host-AssociatedOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024245Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18EnvironmentalOpen in IMG/M
3300024254Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025735Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058897_1008139923300004139Forest SoilIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWQEASGAVLGVAAGILVLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0070683_10160438713300005329Corn RhizosphereVTVWDIMAWVVVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0066388_10527869313300005332Tropical Forest SoilMRFWDVMAWVVVVLGTLATIYTAAMLVTGPARARRARHGAHVRVALTGPGAPREAWEKISRFVPAVASGIILLTINSMSHVRWLLLVPIVTVLVTDQVLSYRDRHRAPAEPS*
Ga0070682_10093901713300005337Corn RhizosphereVTVWDIMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0070682_10169048813300005337Corn RhizosphereIMAWVVVVLGTVFTIYTAAMLVTGPARARRARRGAHVRVTMTGPGAPREAWRKISRVVPAVMSGIILLTIHSMSHLRWVLLVPITAILVIDHVLSYRDRRRAKAQPS*
Ga0070691_1024472623300005341Corn, Switchgrass And Miscanthus RhizosphereMTVWDILAWVVVALATVKTIYYVVMLATGPARARRARRGAHARVALTGTGALREAWQETSGAVFGIAAGIFLLTVNSMSHVRWLLLVPMAAVLVIDQVLRHRDRHRAPAEPA*
Ga0070673_10002298713300005364Switchgrass RhizosphereVVALATVKTIYYVVMLATGPARARRARRGAHVRVALTGTGALREAWQETSGAVFGIAAGIFLLTVNSMSHVRWLLLVPMAAVLVIDQVLRHRDRHRAPAEPA*
Ga0070659_10015786823300005366Corn RhizosphereWDIMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0070709_1020315623300005434Corn, Switchgrass And Miscanthus RhizosphereMTVWDIMAWVVVVLGTVFTIYTAAMLVTGPARARRTRRGAHVRVTMTGPGAPREAWRKISRVVPAVMSGIILLTIHSMSHLRWVLLVPITAILVIDHVLSYRDRRRAKAQPS*
Ga0070709_1056151423300005434Corn, Switchgrass And Miscanthus RhizosphereMRVFDVMAWVVVALATVKTIYYVVMLATGPARVRRAARRAAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLCYRDRHRASAEPA*
Ga0070714_10033817823300005435Agricultural SoilMRVFDVMAWVVVALATVKTIYYVVMLATGPARVRRAARRAAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRASAEPA*
Ga0070714_10046992523300005435Agricultural SoilMTVWDIMAWVVVVLGTVFTIYTAAMLVTGPARARRTGRGAHVRVALVGPGAPREAWRRISRIVPAVMSGIILLTIHSMSHVRWLLLVPITAILVIDHFLSYRDRRGAKAQPS*
Ga0070710_1113824213300005437Corn, Switchgrass And Miscanthus RhizosphereMTVWDIMAWMVVVLGTVFTIYTAAMLVTGPARARRTRRGAHVRVTMTGPGAPREAWRKISRVVPAVMSGIILLTIHSMSHLRWVLLVPITAILVIDHVLSYRDRRRAKAQPS*
Ga0070711_10137176513300005439Corn, Switchgrass And Miscanthus RhizosphereMRVFDVMAWVVVALATVKTIYYVVMLATGPARVRRAARRAAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLR
Ga0070663_10012284513300005455Corn RhizosphereTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0070681_1103426213300005458Corn RhizosphereTVWDIMAWVVVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0070707_10014437833300005468Corn, Switchgrass And Miscanthus RhizosphereMRVFDVLAWVIVALATMKTIYYVVMLATGPARARRARRGAHVRIALTGPGAPREAWQEASGPVLGMASGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0070698_10206325513300005471Corn, Switchgrass And Miscanthus RhizosphereAVMRFWDVLAWVVVVLCTVVTIYTAAMLATGPARARRARHGAHVRLALTGPGAPREAWQEISGAVLGIASAIILLTVNSMSHVRWLLLVPIAAVLVIDQVLNYRDRHRAKAQPS*
Ga0070697_10148523013300005536Corn, Switchgrass And Miscanthus RhizosphereMRVFDVLAWVIVALATMKTIYYVVMLATGPARARRARRGAHVRIALTGPGAPREAWQEASGPVLGIASGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0070704_10101583613300005549Corn, Switchgrass And Miscanthus RhizosphereVTVWDIMAWVIVVLGMVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0066694_1004515523300005574SoilMQFWDILAWVAVVLCTVVTIYTAAMLATGPARARRARHGAHVRLALTGPGAPREAWRKISKLVPVIAAGTILLTINSTSHIRWLLAVPIIAVPAIDLVLSYRDRRRAKAQPS*
Ga0068866_1140644823300005718Miscanthus RhizosphereVTFWDIMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWGKISKFVPAIAAGIILLTINSTSHIRWLLAVPIIAVPAIDLVLSYRDRRRAKVQPS*
Ga0068860_10277690413300005843Switchgrass RhizosphereMTVWDILAWVVVALATVKTIYYVVMLATGPARARRARRGAHVRVALTGTGALREAWQETSGAVFGIAAGIFLLTVNSMSHVRWLLLVPMAAVLVIDQVLRHRDRHRAPAEPA*
Ga0070717_1204021313300006028Corn, Switchgrass And Miscanthus RhizosphereLATVKTIYYVVILATGPARARRAARRGAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRASAEPA*
Ga0066652_10134204713300006046SoilILAWVAVVLCTVVTIYTAAMLATGPARARRARHGAHVRLALTGPGAPREAWRKISKLVPVIAAGTILLTINSTSHIRWLLAVPIIAVPAIDLVLSYRDRRRAKAQPS*
Ga0070712_10042858123300006175Corn, Switchgrass And Miscanthus RhizosphereVTVWDIMAWVIVVLGTVKAIYNVVMLATGPARTRRGAHVRVELTSPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0070712_10114316623300006175Corn, Switchgrass And Miscanthus RhizosphereMRVFDVLAWVIVALATMKTIYYVVMLATGPARARRARRGAHVRIALTGPGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLCYRDRHRASAEPA*
Ga0070765_10152669013300006176SoilMRVFDVMAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHIRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0068871_10007545113300006358Miscanthus RhizosphereIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0079221_1014561723300006804Agricultural SoilMRVFDVMAWVIVVLATVKASYNVAMLATGPARARRTRRGAHVRVALAGPGASREAWPEIPGAVLGIASAIILLTVNSTSHVRWLLLVPILAVLVIDQVLNYRDRHRAKAQPS*
Ga0075425_10187203523300006854Populus RhizosphereMTVWDIMAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWREASGAVLAVPAGILLLTVNSMSHVRWLLLVPMAAVLVIDQVLNYRD
Ga0079219_1180942323300006954Agricultural SoilMRVFDVMAWVIVVLATVKASYNVAMLATGPARARRTRRGAHVRVALAGPGASREAWPEISGAVLGIASAIILLTVNSTSHVRWLLLVPILAVLVIDQVL
Ga0066710_10442560723300009012Grasslands SoilMRFWDVLAWVAVVLCTVVTIYTAAMLATGPARARRAARLGAHVRVALTGPGAPREAWGKISRLVPVIAAGIIRLTLTSMGPIRSLPAAPIIALPL
Ga0105240_1106107023300009093Corn RhizosphereMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0075423_1010887213300009162Populus RhizosphereMTVWDIMAWVVVALATVKAIYNVVMLATGPARARRTRRGAHVRVELTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMAAVLVIDHVLNHRDRRSAKAQPS*
Ga0105237_1128786513300009545Corn RhizosphereMTVWDILAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWREASGAVLAVPAGILLLTVNSMSHVRWLLLVPMAAVLVIDQVLRYRDRHRAPAEPA*
Ga0127503_1052271513300010154SoilMRVFDVMAWVIVVLGTVKAIYYVVMLATGSARARRTRRGAHVRVALTGPGAPREAWQEISGAVLGIASASILLTVNSMSHVRWLLLVPIAAVLVIDQVLNYRDRHRAKVQPS*
Ga0126370_1103407623300010358Tropical Forest SoilMRFWDVMAWVVVVLGTLATIYTAAMLVTGPARARRARHGAHVRVALTGPGAPREAWEKISRFVPAVASGIILLTINSMSHVRWLLLVPIVTVLVIDQVLSYRDRHRAPAEPS*
Ga0126377_1071732423300010362Tropical Forest SoilMRFWDVMAWVVVVLGTLATIYTAAMLVTGPARARRARRARHGAHVRVALTGPGAPREAWEKISRFVPAVASGIILLTINSMSHVRWLLLVPIVTVLVTDQVLSYRDRHRAPAEPS*
Ga0134125_1009442333300010371Terrestrial SoilMTVWDILAWVVVALATVKTIYYVVMLATGPARARRARRGAHVRVALTGTGALREAWQETSGAVFGIAAGIFLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0134125_1227580913300010371Terrestrial SoilMRVFDVMAWVVVALATVKTIYYVVMLATGPARVRRAARRAAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMIAVLGIDQVLNYRDRRSAKAQPS*
Ga0134128_1082175223300010373Terrestrial SoilMRVFDVLAWVVVALATVKTIYYVVMLATGPARARRARRGAHVRVALTGTGALREAWQETSGAVFGIAAGIFLLTVNSMSHVRWLLLVPMAAVLVIDQVLRHRDRHRAPAEPA*
Ga0134128_1180024313300010373Terrestrial SoilMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQ
Ga0134121_1093400613300010401Terrestrial SoilMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLLPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0126358_116764313300010856Boreal Forest SoilMRVFDVMACVIVVLGTVVTIYNVVMLATGPARVRRTRRGAHVRVALTGPGAPREAWQEISGAVLGIASAIILLTVNSMSHVRWLLLVPIVALLVIDQVLRYRDRHRAPAEPA*
Ga0126349_101727413300010861Boreal Forest SoilLCQEPWVLGTVATIYTAAMLATGPARARRTGRGAHVRVALVGPGAPREAWRKISRVVPAVTSGIILLTINSMSHIRWLLIVPLFTVLVIDQVLSYRDRHRVPAEPT*
Ga0126349_101854713300010861Boreal Forest SoilMRVFDVLAWVVVALATVKTIYYVVMLATGPARARRAPRRGAHGRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHIRWLLLVPMVAVLVIDQVLRYRDRRRAPAEPA*
Ga0150983_1263801913300011120Forest SoilMRVFDVLAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWQEASGAVLGVAAGILVLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0137382_1004382923300012200Vadose Zone SoilMPVLDILAWVFIVLGTVITVYSTAMLATGNARARRTRRGTHVRVALTGPGAPQEAWREISGAVLAVMSGIIVLTINSTSHIRWLLLVPGVTILAIDQVLRYRDRRAAPAEPS*
Ga0137365_1067393223300012201Vadose Zone SoilMPVLDILAWVFIVLGTVITVYSTAMLATGNARARRTRRGTHVRVALTGPGAPQEAWREISGAVLAVMSGIIVLTINSTSHIRWLLLVPGVAILAIDQVLRYRDRRAAPAEPS*
Ga0137380_1049597023300012206Vadose Zone SoilMRVFDVLAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLNYRDRRSAKAQPS*
Ga0137381_1033714823300012207Vadose Zone SoilMRVFDVLAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLNYRDRRSAKAQPS*
Ga0137387_1059756213300012349Vadose Zone SoilMRVFDVLAWVVVALATVKTIYCVVMLATGPDRARRAARRGAHVRVAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLNYRDRRSAKAQPS*
Ga0137387_1087873423300012349Vadose Zone SoilMPVLDILAWVFIVLGTVITVYNTAMLATGNARARRTRRGTHVRVALTGPGAPQEAWLEISGAVLAVMSGIIVLTINSTSHIRWLLLVPGVTILAIDQVLRYRDRRAAPAEPS*
Ga0137371_1014370733300012356Vadose Zone SoilMPVLDILAWVFIVLGTVITVYNTAMLATGNARARRTRRGTHVRVALTGPGAPQEAWREISGAVLAVMSGIIVLTINSTSHIRWLLLVPGVAILAIDQVLRYRDRRAAPAEPS*
Ga0157335_100064213300012492Arabidopsis RhizosphereTLATIYTAAMLATGPARARRTRRGAHGRVALAGPGAPREAWGRISRFVPAVASGIILLTVNSMSHVRWLLLVPIVAVLVTDHVLSYRDRHRAPAEPS*
Ga0164298_1086070923300012955SoilMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGTHVRVELTSPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0164301_1046286123300012960SoilMRVWDVLAWVVVALATVKTIYYVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0164302_1026731023300012961SoilMAWVVVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALAGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVVRYRDRHRAPAEPA*
Ga0164308_1050392913300012985SoilNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLVLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0164304_1105903523300012986SoilMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDQHRAPAEPA*
Ga0157375_1107095123300013308Miscanthus RhizosphereMAWVVVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA*
Ga0157379_1159609913300014968Switchgrass RhizosphereMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMAAVLVIDQVLRHRDRHRAPAEPA*
Ga0157376_1013750423300014969Miscanthus RhizosphereMAWVVVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPIVAVLVIDHVLSCRDRHRAPAEPS*
Ga0132256_10089087023300015372Arabidopsis RhizosphereMWVFDIMAWVVVVLGTLATIYTAAMLATGPARARRTRRGAHGRVALAGPGAPREAWGRISRFVPAVASGIILLTVNSMSHVRWLLLVPIVAVLVTDHVLSYRDRHRAPAEPS*
Ga0132257_10032274223300015373Arabidopsis RhizosphereMWVFDIMAWVVVVLGTLATIYTAAMLATGPARARRTRREAHRRVALVGPGAPREAWGRISRFVPAVASGIILLTVNSMSHVRWLLLVPIVAVLVIDHVLSYRDRHRAPAEPS*
Ga0193724_101740033300020062SoilVTVWDIMAWVVVVLGTVVTIYTAAMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGISLLTVNSMSHVRWLLLVPMVAVL
Ga0197907_1125588923300020069Corn, Switchgrass And Miscanthus RhizosphereVTVWDIMAWVVVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0206356_1015840723300020070Corn, Switchgrass And Miscanthus RhizosphereVTVWDIMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLV
Ga0179590_101407033300020140Vadose Zone SoilVTVWDIMAWVVVVLGTVATIYTAAMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0210407_1091484023300020579SoilMRVFDVLAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTDAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0210403_1017955433300020580SoilMTVWDIMAWVVVVLGTVATIYTAAMLATGPARARRTRRGAHVRVALVGPGAPREAWRKISRVVPAVTSGIILLTINSMSHIRWLLIVPIFTVLAIDQVLSYRDRHRAPAEPT
Ga0210408_1017766423300021178SoilMRVWDVLAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWQETSGAVLEIAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0210397_1132868923300021403SoilRSERSGYAVWDVLAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWQEASGAVLGVAAGILVLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0210384_1187968023300021432SoilVMRVFDVLAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTDAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0210402_1030571023300021478SoilMTVWDIMAWVVVVLGTVATIYTAAMLATGPARARRTGRGAHVRVALVGPGAPREAWRKISRVVPAVTSGIILLTINSMSHIRWLLIVPIFTVLVIDQVLSYRDRHRAPAEPT
Ga0210402_1038097133300021478SoilMRVWDVLAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPRETWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVL
Ga0242665_1031127113300022724SoilMTVWDIMAWVVVVLGTVATIYTAAMLATGPARARRTRRGAHVRVALVGPGAPREAWRKISRVVPAVTSGIILLTINSMSHIRWLLIVPIFTVLVIDQVLSYRDRHRAPAEPT
Ga0247677_103348113300024245SoilTVKAIYNVVMLATGPARARRTRRGAHVRVELTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0247661_102015513300024254SoilCDRRPNGAVMTVWDIMAWVVVALATVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLNYRDRRSAKAQP
Ga0247670_101676713300024283SoilLGTLATIYTAAMLATGPARARRTRRGAHGRVALAGPGAPREAWWRISRFVPAVASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLNYRDRRSAKAQPS
Ga0207713_117218023300025735Switchgrass RhizosphereTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0207692_1031597423300025898Corn, Switchgrass And Miscanthus RhizosphereMRVFDVMAWVVVALATVKTIYYVVMLATGPARVRRAARRAAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLCYRDRHRASAEPA
Ga0207692_1101804923300025898Corn, Switchgrass And Miscanthus RhizosphereMTVWDIMAWVVVVLGTVFTIYTAAMLVTGPARARRTRRGAHVRVTMTGPGAPREAWRKISRVVPAVMSGIILLTIHSMSHLRWVLLVPITAILVIDHVLSYRDR
Ga0207680_1117495823300025903Switchgrass RhizosphereVTVWDIMAWVVVVLGTVITIYTAAMLATGPARARRARHGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRARA
Ga0207699_1007138223300025906Corn, Switchgrass And Miscanthus RhizosphereMTVWDIMAWVVVVLGTVFTIYTAAMLVTGPARARRTRRGAHVRVTMTGPGAPREAWRKISRVVPAVMSGIILLTIHSMSHLRWVLLVPITAILVIDHVLSYRDRRRAKAQPS
Ga0207707_1141017613300025912Corn RhizosphereVTVWDIMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPA
Ga0207663_1078268013300025916Corn, Switchgrass And Miscanthus RhizosphereMRVFDVMAWVVVALATVKTIYYVVMLATGPARVRRAARRAAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0207646_1028264423300025922Corn, Switchgrass And Miscanthus RhizosphereMRVFDVLAWVIVALATMKTIYYVVMLATGPARARRARRGAHVRIALTGPGAPREAWQEASGPVLGMASGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0207687_1074311613300025927Miscanthus RhizosphereVTVWDIMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAP
Ga0207700_1091890913300025928Corn, Switchgrass And Miscanthus RhizosphereVTVWDIMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDR
Ga0207664_1090665423300025929Agricultural SoilMRVFDVMAWVVVALATVKTIYYVVMLATGPARVRRAARRAAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRASAEPA
Ga0207644_1009656823300025931Switchgrass RhizosphereMTVWDIMAWVVVALATVKTIYYVVMLATGPARARRARRGAHARVALTGTGALREAWQETSGAVFGIAAGIFLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0207665_1162802023300025939Corn, Switchgrass And Miscanthus RhizosphereMRVFDVMAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQV
Ga0207689_1000711993300025942Miscanthus RhizosphereVTVWDIMAWVVVVLGTVKAIYYVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLCYRDRHRAPAEPA
Ga0207679_1181430213300025945Corn RhizosphereWVIVVMGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0207640_1122655713300025981Corn RhizosphereVTVWDIMAWVVVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLCYRD
Ga0207676_1117451213300026095Switchgrass RhizosphereVTVWDIMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPADPDGWQGQR
Ga0307497_1025160423300031226SoilMGFFDVMAWVIVVLGTVKAIYYVVMLATGPARARRTRRGAHVRLALTGPGAPREAWQEISGAVLGIATAIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0170824_10913288413300031231Forest SoilRGPNGAVMTVWDIMAWVVVALATVKTIYYVVMLATGPARARRAARRGSHVRVALTGTGAPREAWQEASGAVIAVAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0307468_10116490513300031740Hardwood Forest SoilMTVWDIMAWVVVVLGTVKAIYNVVMVATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRH
Ga0307473_1082389023300031820Hardwood Forest SoilMAWVIVVLGTVKAIYNVVMLATGPARARRTRRGAHVRVALTGPGAPREAWQEISGAVFGIASGIILLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0307470_1041842023300032174Hardwood Forest SoilMTVWDILAWVVVALATVKTIYYVVMLATGPARARRARRGAHVRVALTGTGALREAWQETSGAVFGIAAGIFLLTVNSMSHVRWLLLVPMAAVLVIDQVLRYRDRHRAPAEPA
Ga0307471_10157696013300032180Hardwood Forest SoilMRVWDVLAWVVVALATVKTIYYVVMLATGPARARRAARRGAHVRVALTGTGAPREAWQEASGAVIAVAAGIFLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0307472_10075710713300032205Hardwood Forest SoilMTVWDILAWVVVALATVKTIYYVVMLATGPARARRARRGAHVRVALTGTGALREAWRETSGAVFGIAAGILLLTVNSMSHVRWLLLVPMVAVLVIDQVLRYRDRHRAPAEPA
Ga0335085_1167681513300032770SoilMRFWDVMAWVVVVLGTLATVYSAAMLVTGPARARRARHGAHARVALTGPRAPREAWEKISRFVPAVASGIILLTINSMSHVRWLLLVPIVTVLVIEQVLSYRDRHRAQAEASGKA
Ga0335080_1232301623300032828SoilVRILDVMVWVVVALAMVKTIYYVVMLATGPGRARRAARHGAHARVALTGPRAPREAWQEVSGTVLAIASGIVILTVNSMSHVRWLLIVPIAAVLAIDHALSYRDRH

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.