Metagenome / Metatranscriptome Family F092495

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092495
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	68 residues
Representative Sequence	LIGAMLNQKGATGKAKPALNFATDLAREGLCALVKLAPSVCGLSVTEALRVLSNSSVPKPADNIGALP
Number of Associated Samples	85
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.38 %
% of genes near scaffold ends (potentially truncated)	24.30 %
% of genes from short scaffolds (< 2000 bps)	92.52 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.617 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.598 % of family members)
Environment Ontology (ENVO)	Unclassified (47.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.271 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.46% β-sheet: 0.00% Coil/Unstructured: 63.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF11000	DUF2840	52.34
PF10134	RPA	24.30
PF10502	Peptidase_S26	8.41
PF12728	HTH_17	0.93
PF01464	SLT	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.62 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.62 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.62 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.34 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48.60 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.87 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Acidiphilium multivorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium multivorum	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100646803	Not Available	935	Open in IMG/M
3300002245\|JGIcombinedJ26739_101642827	Not Available	541	Open in IMG/M
3300004080\|Ga0062385_10006174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3797	Open in IMG/M
3300004082\|Ga0062384_100030463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2429	Open in IMG/M
3300004082\|Ga0062384_100122002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1432	Open in IMG/M
3300004091\|Ga0062387_100513499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	839	Open in IMG/M
3300005435\|Ga0070714_101141190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300005439\|Ga0070711_100602106	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005447\|Ga0066689_10715156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300005467\|Ga0070706_100851489	Not Available	843	Open in IMG/M
3300005468\|Ga0070707_102168986	Not Available	523	Open in IMG/M
3300005552\|Ga0066701_10233029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1137	Open in IMG/M
3300005598\|Ga0066706_11477168	Not Available	512	Open in IMG/M
3300006046\|Ga0066652_100271767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium multivorum	1493	Open in IMG/M
3300006175\|Ga0070712_100309657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1281	Open in IMG/M
3300006804\|Ga0079221_11458267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300007265\|Ga0099794_10402327	Not Available	715	Open in IMG/M
3300007788\|Ga0099795_10321499	Not Available	685	Open in IMG/M
3300009038\|Ga0099829_11066459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300009088\|Ga0099830_11136948	Not Available	648	Open in IMG/M
3300009090\|Ga0099827_10380841	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300009090\|Ga0099827_11504720	Not Available	586	Open in IMG/M
3300009137\|Ga0066709_104165501	Not Available	526	Open in IMG/M
3300009143\|Ga0099792_10207452	Not Available	1118	Open in IMG/M
3300009143\|Ga0099792_10243037	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300011269\|Ga0137392_10580685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300011270\|Ga0137391_10283625	Not Available	1431	Open in IMG/M
3300011270\|Ga0137391_10557724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	965	Open in IMG/M
3300011271\|Ga0137393_10168992	Not Available	1835	Open in IMG/M
3300011271\|Ga0137393_11261407	Not Available	627	Open in IMG/M
3300012096\|Ga0137389_10848299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300012189\|Ga0137388_10690430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	948	Open in IMG/M
3300012201\|Ga0137365_10860214	Not Available	662	Open in IMG/M
3300012201\|Ga0137365_11221064	Not Available	537	Open in IMG/M
3300012202\|Ga0137363_10254896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1427	Open in IMG/M
3300012202\|Ga0137363_10696122	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300012203\|Ga0137399_11447727	Not Available	574	Open in IMG/M
3300012205\|Ga0137362_11481034	Not Available	565	Open in IMG/M
3300012206\|Ga0137380_10540918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1023	Open in IMG/M
3300012207\|Ga0137381_10967025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300012211\|Ga0137377_11703467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300012349\|Ga0137387_10601951	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300012361\|Ga0137360_10421541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1128	Open in IMG/M
3300012361\|Ga0137360_10519795	Not Available	1014	Open in IMG/M
3300012361\|Ga0137360_10594005	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300012361\|Ga0137360_11070802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300012362\|Ga0137361_10525059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300012363\|Ga0137390_10376124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1400	Open in IMG/M
3300012363\|Ga0137390_10842535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	873	Open in IMG/M
3300012363\|Ga0137390_11069898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300012582\|Ga0137358_10477529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	841	Open in IMG/M
3300012683\|Ga0137398_10471784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860	Open in IMG/M
3300012917\|Ga0137395_10961751	Not Available	614	Open in IMG/M
3300012917\|Ga0137395_11178445	Not Available	538	Open in IMG/M
3300012918\|Ga0137396_10423437	Not Available	987	Open in IMG/M
3300012922\|Ga0137394_10563539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	965	Open in IMG/M
3300012927\|Ga0137416_10563634	Not Available	988	Open in IMG/M
3300012927\|Ga0137416_10807036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300012929\|Ga0137404_10369752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1259	Open in IMG/M
3300012930\|Ga0137407_10715248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300015264\|Ga0137403_10495593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1094	Open in IMG/M
3300016294\|Ga0182041_10035771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3234	Open in IMG/M
3300016319\|Ga0182033_10638842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300018433\|Ga0066667_10415861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1091	Open in IMG/M
3300020579\|Ga0210407_10274574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1315	Open in IMG/M
3300020579\|Ga0210407_10425698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300021170\|Ga0210400_10237210	All Organisms → cellular organisms → Bacteria → Proteobacteria	1489	Open in IMG/M
3300021478\|Ga0210402_10627189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	996	Open in IMG/M
3300026551\|Ga0209648_10107550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2274	Open in IMG/M
3300026551\|Ga0209648_10343172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1033	Open in IMG/M
3300026551\|Ga0209648_10459988	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300026551\|Ga0209648_10751568	Not Available	532	Open in IMG/M
3300026557\|Ga0179587_10449597	Not Available	843	Open in IMG/M
3300026557\|Ga0179587_10492772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300026895\|Ga0207758_1013346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	817	Open in IMG/M
3300027703\|Ga0207862_1169254	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300027737\|Ga0209038_10098102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	885	Open in IMG/M
3300027846\|Ga0209180_10372474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	812	Open in IMG/M
3300027882\|Ga0209590_10096596	All Organisms → cellular organisms → Bacteria → Proteobacteria	1757	Open in IMG/M
3300027903\|Ga0209488_10518489	Not Available	872	Open in IMG/M
3300028047\|Ga0209526_10199180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1387	Open in IMG/M
3300028536\|Ga0137415_10414652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1152	Open in IMG/M
3300029636\|Ga0222749_10480282	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031543\|Ga0318516_10068615	All Organisms → cellular organisms → Bacteria → Proteobacteria	1962	Open in IMG/M
3300031640\|Ga0318555_10361658	Not Available	786	Open in IMG/M
3300031679\|Ga0318561_10139407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1297	Open in IMG/M
3300031682\|Ga0318560_10805211	Not Available	507	Open in IMG/M
3300031719\|Ga0306917_10049644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2817	Open in IMG/M
3300031719\|Ga0306917_11124171	Not Available	611	Open in IMG/M
3300031751\|Ga0318494_10400893	Not Available	796	Open in IMG/M
3300031763\|Ga0318537_10279333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300031794\|Ga0318503_10322838	Not Available	502	Open in IMG/M
3300031795\|Ga0318557_10037940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1982	Open in IMG/M
3300031798\|Ga0318523_10616445	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031819\|Ga0318568_10996623	Not Available	517	Open in IMG/M
3300031845\|Ga0318511_10069434	All Organisms → cellular organisms → Bacteria → Proteobacteria	1453	Open in IMG/M
3300031845\|Ga0318511_10625584	Not Available	503	Open in IMG/M
3300031880\|Ga0318544_10115874	Not Available	1016	Open in IMG/M
3300031890\|Ga0306925_11106189	Not Available	800	Open in IMG/M
3300032060\|Ga0318505_10367249	Not Available	680	Open in IMG/M
3300032065\|Ga0318513_10369658	Not Available	699	Open in IMG/M
3300032066\|Ga0318514_10484637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300032091\|Ga0318577_10018896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2836	Open in IMG/M
3300032782\|Ga0335082_10767582	Not Available	826	Open in IMG/M
3300033289\|Ga0310914_10645218	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.33%
Aquatic	Environmental → Aquatic	4.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.33%
Freshwater	Environmental → Aquatic → Freshwater	4.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.05%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026895	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1006468031	3300002245	Forest Soil	MTGAMLDQKGGGKAKLAPNFAMDPAQEWLCALDRLARFVCGLSVAEALRWLPNSFVPK
JGIcombinedJ26739_1016428272	3300002245	Forest Soil	MIGAILNQKGATGKAKPALNCATDPAREGLRAVVKLGPSXCGLSVIETLRVPSNSSLPKPADNLGAPQ*
Ga0062385_100061745	3300004080	Bog Forest Soil	LIGAMLNQKGATGKTKPALNFATDPAREGLCALVKLARSVCSLSVAKTLRVLSNSSLPKPTDNIRGLQ*
Ga0062384_1000304633	3300004082	Bog Forest Soil	MIVAVLDQKGARCKTKPAVHYARDLAPEGLYARIELAASVCGLSVAQPLEVLSNSCLPKPTDNIGAPK*
Ga0062384_1001220022	3300004082	Bog Forest Soil	MLNQKGATGKTKPALNFATDPAREGLCALVKLARSVCSLSVAKTLRVLSNSSLPKPTDNIRGLQ*
Ga0062387_1005134991	3300004091	Bog Forest Soil	GARCKTKPAVHYARDLAPEGLYARIELAASVCGLSVAQPLEVLSNSCLPKPTDNIGAPK*
Ga0070714_1011411902	3300005435	Agricultural Soil	MVPPHRAGEATLIGATLNQKGATGKTKPALNFATDPAREGLCAIVKLARSVCSLSVAKTLRVLSNSSLPKPTDKIRGLQ*
Ga0070711_1006021062	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPNQKGATGNAKPALNFATDSAREEFCAPVKLWPSVYGLNVTEALRALPNNSLPKPA
Ga0066689_107151561	3300005447	Soil	WCHPTAIGETALIGAMRNPRGATGKAKPALNFATHPAREGLCAIVKLGPSVCGLSVTETLRVLSNGFLPKSADNIGAPQ*
Ga0070706_1008514892	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LIGAMLNQKGVTGKTKPALNFATLSAREWLRAPVKLAPSVWRRCVAEALRVLLNSSVREPADNLGARQ*
Ga0070707_1021689862	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LIGAMLSQTGATGKAKTALNFAMDSAREGLRAPVKLAPSVWRRCVAEALRVLLNSSVREPADNLGARQ*
Ga0066701_102330291	3300005552	Soil	KGGYSQRWCHPIAIGEAALIGAMRNQMRATGKTKPARNFATDSAREGLCAPVKLARFVCGFSVAEALRVLPNSSVPKPADNIGAPQ*
Ga0066706_114771682	3300005598	Soil	MLSQKGATGKAKPALKFATDAAREGFRAPVKLGPSVYGLSVTEALRVLSNSSLPKPADNIGAPQ*
Ga0066652_1002717671	3300006046	Soil	RWCHPTATGEAALIGAMRNQMRGTGKTKPALNFATDSAREEFCAPVKLGPSVYGLGVTKALRVLPNSSLAKPADNIGTPQ*
Ga0070712_1003096572	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPNQKGATGNAKPALNFATDSAREEFCAPVKLWPSVYGLNVTEALRALPNNSLPKPADNIGAPQ*
Ga0079221_114582671	3300006804	Agricultural Soil	ARGKTKPAVHFATDLAREGLCARIELGASIWGLSVAQTLRALSNSCLPKPTDDIGAPQ*
Ga0099794_104023272	3300007265	Vadose Zone Soil	MIVAMLNQKGASGKTKPAVHFARDLAREGLCARIKLAASGCGLTVTQRLRVISNSCPPKPGDNIGAPQ*
Ga0099795_103214992	3300007788	Vadose Zone Soil	MIVAMLNQKGATGKTKPALNFATDLTREGLCVRIKLAASGCGLTVTQRLRVLSNSCPPKPGDNIGPPQ*
Ga0099829_110664591	3300009038	Vadose Zone Soil	MTGAMLDQKGATGKAKPALNFATDLAREGLCALVKLAPSVCGLSVTEALRVLSNSSVPKPADNIGALP*
Ga0099830_111369481	3300009088	Vadose Zone Soil	NQMRATGKAKPASNFATYPAREELCATVKLAPSVCGLSVIEALRVLSNSSVPKPADNIGGLQ*
Ga0099827_103808412	3300009090	Vadose Zone Soil	MIVAVLDQKGARCKTKPAVHYARDLAPEGLYARIKLAASVCGLSVAQPLEVLSNTCLPKPTDNIGAPQ*
Ga0099827_115047202	3300009090	Vadose Zone Soil	PKGGYSQRWCHPIATGEAAMIGAMLNQKGATGKTKPALHFATDLTREGLCARIKLAASGCGLTVTQRLRVLSNSCPPKPGDNIGPPQ*
Ga0066709_1041655011	3300009137	Grasslands Soil	LIGATLNQKGAAGKTKPALNFATDPAREGLCALVKLTRSVCSLSVAKTLRALSNSSLPKPTYNIRGLQ*
Ga0099792_102074523	3300009143	Vadose Zone Soil	MIGAMLNQKGATGKTKPALNFATDLTREGLCVRIKLAASGCGLTVTQRLRVLSNSCPPKPGDNIGPPQ*
Ga0099792_102430372	3300009143	Vadose Zone Soil	MIDTMLNQKEATGKANPALNFATDLAREGFRAPVNLSPSVCRLRVTETLRVLSNSSVPKPADNIGGLQ*
Ga0137392_105806852	3300011269	Vadose Zone Soil	LIGAMLNQKEATGKANPALNFATDLAREGFRAPVNLSPSVCGLRVTETLRVLSNSSVPKPADNIGGLQ*
Ga0137391_102836252	3300011270	Vadose Zone Soil	MIVAVLGRKGGRGKTKPALHFAGDLAREGLCARIKLAASVCGLSVDQPLEVLSNSRSSKPTDNIGAPQ*
Ga0137391_105577242	3300011270	Vadose Zone Soil	LIGTMLNQKGATGKAKPALNFATDLAREGLCALVKLAPSVCGLCVTEALRVLSNSSVPKPADNIGALP*
Ga0137393_101689922	3300011271	Vadose Zone Soil	MIVAVLDQKGARCKTKPAVHYARDLAPEGLYARIELAASVCGLSVAQPLEVLSNSCLPKPTDNIGAPQ*
Ga0137393_112614072	3300011271	Vadose Zone Soil	LIDTMLNQKEATGKANPAPNFATDLAREGFRAPVNLSPSVCGLRVIETLRVLSNSSVPKPADNIGGLQ*
Ga0137389_108482992	3300012096	Vadose Zone Soil	MIDTMLNQKEATGKANPAPNFATDLAREGFRAPVNLSPSVCGLRVTETLRVLSNSSVPKPADNIGGLQ*
Ga0137388_106904303	3300012189	Vadose Zone Soil	LIDTMLNQKEATGKANPALNFATDLAREGFRAPVNLSPSVCGLRVTETLRVLSNSSVPKPADNIGGLQ*
Ga0137383_106299413	3300012199	Vadose Zone Soil	LNFATDLVREGLCAPVKLAASVYGLSVTEAFPVLSNSSLPKPADNIGALP*
Ga0137365_108602141	3300012201	Vadose Zone Soil	LIDAMRNQMRGTGKTKPALNFATDSVREEFCAPVKLGPSVYGLGVTKALRVLPNSSLAKPADNIGTPQ*
Ga0137365_112210641	3300012201	Vadose Zone Soil	LIGAMLNQKGATGKAKPALNFATHPAREGLCATVKLGPSVYGLSVTETLRVLSNGFLPKSADNIGAPQ*
Ga0137363_102548962	3300012202	Vadose Zone Soil	LIGAMRNPRGATGKAKPALNFATHPAREGLCATVKLGPSVCGLSVTETLRVLSNGFLPKSADNIGAPQ*
Ga0137363_106961221	3300012202	Vadose Zone Soil	LIGAMLNQKEATGKANPAPNFATDLAREGFRAPVNLSPSVGRLRVTETLRVLSNSSVPKPADNIGWLQ*
Ga0137399_114477272	3300012203	Vadose Zone Soil	MIGAMLNQKGATGKTKPAVHFARDLAREGLCARIKLAASGCGLTVTQRLRVLSNSCPPKPGDNIGPPQ*
Ga0137362_114810341	3300012205	Vadose Zone Soil	MIDTMLNQKEATGKANPAPNFATDLAREGFRAPVNLSPSVCGLRVTETLRVLSNSSVPKPADNIGWLQ*
Ga0137380_105409182	3300012206	Vadose Zone Soil	MRNQMRATGKTKPARNFATDSAREGLCAPVKLARFVCGFSVAEALRVLPNSSVPKPADNIGAPQ*
Ga0137381_109670252	3300012207	Vadose Zone Soil	LIGAMLNQKEATGKANPALNFATDLAREGFRAPVNLSPSVCGLHVTEALRVLPNSSLPDPADNIGALQ*
Ga0137377_117034672	3300012211	Vadose Zone Soil	MIVAMLNQKGATGKTKPAVHFARDLAREGLCARIKLAASGCGLTVTQRLRVLSNSCPPKPGDNIGAPQ*
Ga0137387_106019511	3300012349	Vadose Zone Soil	LIDAMRNQMRGTGKTKPALNFATDSVREEFCAPVKLGPSVYGLGVTEALRVLSNSSLAKPADNIGAPQ*
Ga0137386_111715753	3300012351	Vadose Zone Soil	LIFATHLARQGLCATVKLAASVCGLSVAEALRVLSNSSVPKPADNLGALQ*
Ga0137360_104215413	3300012361	Vadose Zone Soil	LIDTMLNQKEATGKANPAPNFATDLAREGFRAPVNLSPSVCRLRVTETLRVLSNSSVPKPADNIGWLQ*
Ga0137360_105197951	3300012361	Vadose Zone Soil	MIGAMLNQKGATGKTKPALHFATDLTREGLYARIKLPASGCGLTVTQRLRVLSNSCPPKPGDNIGAPQ*
Ga0137360_105940052	3300012361	Vadose Zone Soil	MIVAVLDQKGAKCKTKPAVHYAKDLAPEGLYARIKLAAPVCGLSVAQPLEVLSNSCLPKPTNNIGAPQ*
Ga0137360_110708021	3300012361	Vadose Zone Soil	KGATGKAKPALNFATHPAREGLCATVKLGPSVCGLSVTETLRVLSNGFLPKSADNIGAPQ
Ga0137361_105250592	3300012362	Vadose Zone Soil	LIGTMLNQKGATGKAKLALNFAMDSAQEKFRATVKLGPSVYGLSATEAFRVLPHSSLPKPADNIGAPQ*
Ga0137390_103761241	3300012363	Vadose Zone Soil	PTATGEAALIDTMLNQKEATGKANPALNFATDLAREGFRAPVNLSPSVCGLRVTETLRVLSNSSVPKPADNIGGLQ*
Ga0137390_108425352	3300012363	Vadose Zone Soil	MIGAMLNQKGATGKTKPALNFATDLAREGLSALVKLAPSVCGLRVAETLQVLSKSSLPKPADNIGAPQ*
Ga0137390_110698981	3300012363	Vadose Zone Soil	MIVAVLGRKGGRGKTKPALHFAGDLAREGLCARIKLAASVCGLSVAQPLEVLSNSCLPKPTDNIGAPQ*
Ga0137358_104775292	3300012582	Vadose Zone Soil	MIVAVLDQKGARCKTRPAVHYARDLAPEGLYARIKLAASVCGLSVAQPLKVLSNSCLPKPTDNIGAPQ*
Ga0137398_104717841	3300012683	Vadose Zone Soil	QKEATGKANPAPNFATDLAREGFRAPVNLSPSVCRLRVTETLRVLSNSFVPKRADNIGASQ*
Ga0137395_109617512	3300012917	Vadose Zone Soil	LIDTMLNQKEATGNANPALNFATDLAREGFRAPVNLSPSVCGLRVTETLRVLSNSSVPKPADNI
Ga0137395_111784451	3300012917	Vadose Zone Soil	HSQRWCRPIATGEAALTGAMLNKKEATGKTKPALNFATDLAREGLSALVKLAPSVCGLRVAETLQVLSKSSLPKPADNIGAPQ*
Ga0137396_104234372	3300012918	Vadose Zone Soil	LIGAMRNPKGATGKAKPALNFATHPAREGLCATVKLGPSVCGLSVTETLRVLSNGFLPKS
Ga0137394_105635392	3300012922	Vadose Zone Soil	LISAIPNQKGATGKAKPALNFATDLVREGLCTLVKLAASVYGLSVTDAFRVLSNSFLPKPADNIGAPQ*
Ga0137416_105636342	3300012927	Vadose Zone Soil	LIGAMRNPKGATGKAKPALNFATHPAREGLCATVKLGPSVCGLSVTETLRVLSNGFLPKSADNIGAPQ*
Ga0137416_108070362	3300012927	Vadose Zone Soil	MIGAMLNQKGATGKAKPAPKFATDAAREGFRAPVKLGPSVYGLSVTEALRVLSNSSLPKPADNIGAPQ*
Ga0137404_103697522	3300012929	Vadose Zone Soil	MIGAMLSQKGATGKAKPALKFATDAAREGFRAPVKLGPSVYGLSVTETLRVLPNSSLPKPADNIGAPQ*
Ga0137407_107152482	3300012930	Vadose Zone Soil	LIGAMRNQMRGTGKTKPALNFATDSAREEFCAPVKLGPSVYGLSVTEALRVLSNSSLPEPADNIGAPQ*
Ga0137403_104955933	3300015264	Vadose Zone Soil	MIGAMLSQKGATGKAKPALKFATDAAREGFRAPVKLGPSVYGLSVTEALRVLSNSSLPKPADNIGAPQ*
Ga0182041_100357713	3300016294	Soil	MIAVMLNQKGATGKSKPALNFATDLAREGLCALVKVASSVCDLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0182033_106388423	3300016319	Soil	AAMRNPKGATGKSKPALNFATDLAREGPCALVKLASSVCGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0066667_104158612	3300018433	Grasslands Soil	MTGAMLDQKGATGKTKTASNFATDLAREGLCALIKLARSVCGLSVTQTLRALSNSSVPEPANNIGAPQ
Ga0210407_102745743	3300020579	Soil	MTGAMLDQKGASGKAKLAPNFAMDPAQEWLCALDRLARFVCGLSVAEALRWLPNSFVPEPADNIGAPQ
Ga0210407_104256983	3300020579	Soil	LIDTMLNQKEATGKANPALNFATDLAREGFRAPVNLSPSVCGLRVTETLRVLSNSSVPKPADNIGGLQ
Ga0210400_102372102	3300021170	Soil	MIGAMLNQKGATGKAKPALNFATDPTREGLCALVKLASSVCGLSVIETIRVLSNSSLPKPADNSGAPQ
Ga0210402_106271893	3300021478	Soil	MIGAMLNQKGATGKAKPALNCATDPAREGLRAVVKLGPSFCGLSVIETLRVPSNSSLPKPADNLGAPQ
Ga0209648_101075504	3300026551	Grasslands Soil	MIVAMLNQKGAATGKTKPAVHFARDLAREGLCARIKLPASGCGLTVTQRLRVLSNSCPPKPGDNIGAPQ
Ga0209648_103431721	3300026551	Grasslands Soil	LIGAMLNQKEATGKANPALNFAMALARERFCAPIKLAHSVYGLSVTEALRVLPNSSEPDPADNIGAPQ
Ga0209648_104599882	3300026551	Grasslands Soil	LIGAMLNQKGATGKTKRALSFATDLGREGLCAFVKLARSVCGISVAETPRVLSNSSLPEPADNIGAPQ
Ga0209648_107515682	3300026551	Grasslands Soil	MIVAVLDQKGARCKTKPAVHYARDLAPEGLYARIKLAASVCGLSVAQPLEVLSNSCLPKPTDNIGAPQ
Ga0179587_104495973	3300026557	Vadose Zone Soil	PKDEHSQRWFRPIATGEATLIGAMLNQKWATGKTKPALNFATDPAREGLCALVKLTRSVCSLSVAKTLRMRSNSSLPKPTDKIRGLQ
Ga0179587_104927722	3300026557	Vadose Zone Soil	MIGAMLNQKGATGKTKPTVHFARDLAREGLCARIKLAASVCGLSVAQTLRALSNSCLLKPTDNIGAPQ
Ga0207758_10133463	3300026895	Tropical Forest Soil	AMIGAMLNQKGATGKAKPAPKFATDAAREGFRAPVKLGPSVCGLSVTEALRVLSNSSLPKPADNIGAPP
Ga0207862_11692541	3300027703	Tropical Forest Soil	MIGAMLNQKGATGKAKPAPKFATDAAREGFRAPVKLGPSVCGLSVTEALRVLSNSSLPKPADNIGAPP
Ga0209038_100981021	3300027737	Bog Forest Soil	PAVHYARDLAPEGLYARIELAASVCGLSVAQPLEVLSNSCLPKPTDNIGAPK
Ga0209180_103724742	3300027846	Vadose Zone Soil	LIGAMLNQKGATGKAKPALNFATDLAREGLCALVKLAPSVCGLSVTEALRVLSNSSVPKPADNIGALP
Ga0209590_100965962	3300027882	Vadose Zone Soil	MIGAMLNQKGATGKTKPALNFATDLTREGLCVRIKLAASGCGLTVTQRLRVLSNSCPPKPGDNIGPPQ
Ga0209488_105184892	3300027903	Vadose Zone Soil	MIVAMLNQKGATGKTKPALNFATDLTREGLCVRIKLAASGCGLTVTQRLRVLSNSCPPKPGDNIGPPQ
Ga0209526_101991803	3300028047	Forest Soil	LIGAMLNQKGASGKAKPALNFATDLAREGLCAMVKLSPSVCGLSVIETLRVLSNSSLPKPADNIGARQ
Ga0137415_104146522	3300028536	Vadose Zone Soil	MIGAMLNQKGATGKAKPAPKFATDAAREGFRAPVKLGPSVYGLSVTEALRVLSNSSLPKPADNIGAPQ
Ga0222749_104802822	3300029636	Soil	MIGAILNQKGATGKAKTALNFATDLEREGLCALVKVAPSVCGLSVIETLRVLSNSSVREPTDNIGAPQ
Ga0318516_100686152	3300031543	Soil	MIAAMLNQKRATGKSKPALNFATDLAREGLCALVKLASSACGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318555_103616581	3300031640	Soil	MIAAMLNQKRATGKSKPALNFATDLAREGLCALVKLASSVCGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318561_101394072	3300031679	Soil	MIAVMLNQKGATGKSKPALNFATDLAREGLCALVKLASSVCDLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318560_108052111	3300031682	Soil	MIAVMLNQKGATGKSKPALNFATDLAREGLCALVKLASSACGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0306917_100496444	3300031719	Soil	MIAVMLNQKGATGKSKPALNFATDLAREGLCALVKLASSVCGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0306917_111241711	3300031719	Soil	MIAAMRNPKGATGKSKSALNFATDLAREGLCAVVKLASSVCGLSVTKALRVRSSSSVPKRGDNIGAPQ
Ga0318494_104008931	3300031751	Soil	PIATGEAAMIAVMLNQKGATGKSKPALNFATDLAREGLCALVKLASSVCDLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318537_102793332	3300031763	Soil	TGKSKPALNFATDLAREGLCALVKLASSACGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318503_103228381	3300031794	Soil	MIAAMLNQKRATGKSKPALNFATDLAREGLCALVKLASSVCDLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318557_100379402	3300031795	Soil	MIAAMLNQKRATGKSKPALNFATDLAREGLCALVKVASSVCDLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318523_106164452	3300031798	Soil	MIAAMRNPKGATGKSKSALNFATDLAREGLCAVVKLASSVCGLSVTKALRVRSSSS
Ga0318568_109966231	3300031819	Soil	YSHQWCRPIATGEAAMIAVMLNQKGATGKSKPALNFATDLAREGLCALVKVASSVCDLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318511_100694341	3300031845	Soil	LIGAMFNQKGAIGKAKPTLNFAAASAREGLCALVKLARSVCSLSVAKTVRVLSNSSLSKPADNIRALQ
Ga0318511_106255842	3300031845	Soil	MIAAMLNQKGATGKSKPALNFATDLAREGLCALVKLASSVCDLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318544_101158741	3300031880	Soil	MIAVMLNQKGATGKSKPALHFGTDLAREGLCALVKLASSVCGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0306925_111061891	3300031890	Soil	MIAAMLNQKGAIGKSKPALNFATDLAREGLCALVKLASSACGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318505_103672491	3300032060	Soil	QKGATGKSKPALNFATDLAREGLCALVKLASSVCDLSVTKALRVRSNSSVPKRGDNIGAP
Ga0318513_103696581	3300032065	Soil	CRPIATGETAMIAVMLNQKGATGKSKPALNFATDLAREGLCALVKLASSACGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0318514_104846371	3300032066	Soil	MFNQKGAIGKAKPTLNFAAASAREGLCALVKLARSVCSLSVVKTVRVLSNSSLSKPADNIRALQ
Ga0318577_100188964	3300032091	Soil	MIAAMLNQKRATGKSKPALNFATDLAREGLCALVKLASSACGLSVTKALRVRSSSSVPKRGDNIGAPQ
Ga0335082_107675823	3300032782	Soil	MIVAMLNQKGATGKSKPALNFATDLAREGLCALVKLASSVCGLSVTKALRVRSNSSVPKRGDNIGAPQ
Ga0310914_106452181	3300033289	Soil	MIAAMLNQKGATGKSKPALNFATDLAREGLCALVKLASSACGLSVTKALRVRSNSSVPKRGDNIGAPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092495

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences