Metagenome / Metatranscriptome Family F092521

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092521
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	93 residues
Representative Sequence	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEH
Number of Associated Samples	89
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.06 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	97.20 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.832 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.271 % of family members)
Environment Ontology (ENVO)	Unclassified (52.336 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (49.533 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.88% β-sheet: 1.75% Coil/Unstructured: 47.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00248	Aldo_ket_red	15.89
PF00202	Aminotran_3	12.15
PF04237	YjbR	9.35
PF08241	Methyltransf_11	3.74
PF12867	DinB_2	3.74
PF00106	adh_short	2.80
PF12277	DUF3618	1.87
PF00196	GerE	0.93
PF00561	Abhydrolase_1	0.93
PF01370	Epimerase	0.93
PF00383	dCMP_cyt_deam_1	0.93
PF01738	DLH	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	9.35

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.83 %
Unclassified	root	N/A	26.17 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.07 %
Unclassified	root	N/A	26.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidothermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales	1.87 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
unclassified Acidothermales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales	1.87 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.17 %
Acidothermales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	1.87 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.93 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.93 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004613\|Ga0068937_1230345	Not Available	513	Open in IMG/M
3300005163\|Ga0066823_10074757	All Organisms → cellular organisms → Bacteria → Terrabacteria group	656	Open in IMG/M
3300005546\|Ga0070696_100887969	All Organisms → cellular organisms → Bacteria → Terrabacteria group	739	Open in IMG/M
3300005764\|Ga0066903_100713666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1771	Open in IMG/M
3300005921\|Ga0070766_10576455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300005921\|Ga0070766_10782620	Not Available	649	Open in IMG/M
3300006059\|Ga0075017_101206698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300006174\|Ga0075014_100562952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	647	Open in IMG/M
3300009520\|Ga0116214_1411284	Not Available	529	Open in IMG/M
3300009700\|Ga0116217_10534823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300010341\|Ga0074045_10357982	Not Available	950	Open in IMG/M
3300010358\|Ga0126370_10567760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300010358\|Ga0126370_11606830	All Organisms → cellular organisms → Bacteria → Terrabacteria group	622	Open in IMG/M
3300010375\|Ga0105239_13207689	All Organisms → cellular organisms → Bacteria → Terrabacteria group	532	Open in IMG/M
3300010379\|Ga0136449_102088408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300010379\|Ga0136449_102162978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300012971\|Ga0126369_10499615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1274	Open in IMG/M
3300012971\|Ga0126369_12717276	All Organisms → cellular organisms → Bacteria → Terrabacteria group	579	Open in IMG/M
3300016357\|Ga0182032_10318212	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300016387\|Ga0182040_10619069	All Organisms → cellular organisms → Bacteria → Terrabacteria group	878	Open in IMG/M
3300017928\|Ga0187806_1139918	Not Available	793	Open in IMG/M
3300017959\|Ga0187779_10843281	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300017973\|Ga0187780_11139423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	571	Open in IMG/M
3300017999\|Ga0187767_10328793	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300018001\|Ga0187815_10138562	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1028	Open in IMG/M
3300018006\|Ga0187804_10109955	Not Available	1138	Open in IMG/M
3300018037\|Ga0187883_10726425	Not Available	519	Open in IMG/M
3300018044\|Ga0187890_10491272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300018058\|Ga0187766_11040544	Not Available	585	Open in IMG/M
3300018060\|Ga0187765_10854543	Not Available	612	Open in IMG/M
3300018060\|Ga0187765_10912405	Not Available	595	Open in IMG/M
3300018085\|Ga0187772_11454355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300021088\|Ga0210404_10670888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300021181\|Ga0210388_11330609	Not Available	605	Open in IMG/M
3300021403\|Ga0210397_10145164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	1653	Open in IMG/M
3300021406\|Ga0210386_11379879	Not Available	591	Open in IMG/M
3300021420\|Ga0210394_10628943	Not Available	943	Open in IMG/M
3300021433\|Ga0210391_10620430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300021474\|Ga0210390_10423041	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300021477\|Ga0210398_10623542	Not Available	875	Open in IMG/M
3300021560\|Ga0126371_11340766	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300021560\|Ga0126371_11647087	All Organisms → cellular organisms → Bacteria → Terrabacteria group	767	Open in IMG/M
3300021560\|Ga0126371_12176939	All Organisms → cellular organisms → Bacteria → Terrabacteria group	669	Open in IMG/M
3300025494\|Ga0207928_1042658	Not Available	869	Open in IMG/M
3300025885\|Ga0207653_10212293	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300026294\|Ga0209839_10208562	Not Available	625	Open in IMG/M
3300027604\|Ga0208324_1194617	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300027884\|Ga0209275_10608234	Not Available	627	Open in IMG/M
3300030730\|Ga0307482_1041183	Not Available	1083	Open in IMG/M
3300031543\|Ga0318516_10275106	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300031543\|Ga0318516_10512962	All Organisms → cellular organisms → Bacteria → Terrabacteria group	687	Open in IMG/M
3300031544\|Ga0318534_10203950	Not Available	1141	Open in IMG/M
3300031544\|Ga0318534_10234275	Not Available	1059	Open in IMG/M
3300031546\|Ga0318538_10143173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1259	Open in IMG/M
3300031564\|Ga0318573_10588057	All Organisms → cellular organisms → Bacteria → Terrabacteria group	599	Open in IMG/M
3300031572\|Ga0318515_10549219	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031573\|Ga0310915_10608833	Not Available	774	Open in IMG/M
3300031640\|Ga0318555_10213812	Not Available	1040	Open in IMG/M
3300031640\|Ga0318555_10216810	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300031679\|Ga0318561_10175484	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300031680\|Ga0318574_10156558	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300031680\|Ga0318574_10596609	All Organisms → cellular organisms → Bacteria → Terrabacteria group	647	Open in IMG/M
3300031681\|Ga0318572_10319985	All Organisms → cellular organisms → Bacteria → Terrabacteria group	918	Open in IMG/M
3300031682\|Ga0318560_10541899	All Organisms → cellular organisms → Bacteria → Terrabacteria group	630	Open in IMG/M
3300031682\|Ga0318560_10810286	All Organisms → cellular organisms → Bacteria → Terrabacteria group	505	Open in IMG/M
3300031747\|Ga0318502_10296369	All Organisms → cellular organisms → Bacteria → Terrabacteria group	950	Open in IMG/M
3300031768\|Ga0318509_10812153	All Organisms → cellular organisms → Bacteria → Terrabacteria group	517	Open in IMG/M
3300031771\|Ga0318546_10033155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3094	Open in IMG/M
3300031777\|Ga0318543_10314824	Not Available	700	Open in IMG/M
3300031777\|Ga0318543_10576658	All Organisms → cellular organisms → Bacteria → Terrabacteria group	504	Open in IMG/M
3300031778\|Ga0318498_10503543	Not Available	533	Open in IMG/M
3300031781\|Ga0318547_10384101	All Organisms → cellular organisms → Bacteria → Terrabacteria group	860	Open in IMG/M
3300031782\|Ga0318552_10559946	All Organisms → cellular organisms → Bacteria → Terrabacteria group	583	Open in IMG/M
3300031793\|Ga0318548_10153603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1123	Open in IMG/M
3300031793\|Ga0318548_10424886	All Organisms → cellular organisms → Bacteria → Terrabacteria group	651	Open in IMG/M
3300031794\|Ga0318503_10170836	All Organisms → cellular organisms → Bacteria → Terrabacteria group	703	Open in IMG/M
3300031796\|Ga0318576_10376308	All Organisms → cellular organisms → Bacteria → Terrabacteria group	671	Open in IMG/M
3300031797\|Ga0318550_10252651	All Organisms → cellular organisms → Bacteria → Terrabacteria group	855	Open in IMG/M
3300031799\|Ga0318565_10081931	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300031821\|Ga0318567_10129425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1385	Open in IMG/M
3300031821\|Ga0318567_10757014	All Organisms → cellular organisms → Bacteria → Terrabacteria group	551	Open in IMG/M
3300031835\|Ga0318517_10530646	Not Available	530	Open in IMG/M
3300031845\|Ga0318511_10269191	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300031846\|Ga0318512_10197869	All Organisms → cellular organisms → Bacteria → Terrabacteria group	982	Open in IMG/M
3300031859\|Ga0318527_10135997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300031879\|Ga0306919_10197626	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300031893\|Ga0318536_10483209	All Organisms → cellular organisms → Bacteria → Terrabacteria group	623	Open in IMG/M
3300031894\|Ga0318522_10353708	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031896\|Ga0318551_10409668	All Organisms → cellular organisms → Bacteria → Terrabacteria group	771	Open in IMG/M
3300031912\|Ga0306921_11615934	All Organisms → cellular organisms → Bacteria → Terrabacteria group	704	Open in IMG/M
3300031941\|Ga0310912_10959938	All Organisms → cellular organisms → Bacteria → Terrabacteria group	656	Open in IMG/M
3300031959\|Ga0318530_10262827	All Organisms → cellular organisms → Bacteria → Terrabacteria group	712	Open in IMG/M
3300032001\|Ga0306922_10198355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2154	Open in IMG/M
3300032008\|Ga0318562_10730645	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300032010\|Ga0318569_10368576	All Organisms → cellular organisms → Bacteria → Terrabacteria group	669	Open in IMG/M
3300032041\|Ga0318549_10236613	All Organisms → cellular organisms → Bacteria → Terrabacteria group	821	Open in IMG/M
3300032041\|Ga0318549_10323430	Not Available	695	Open in IMG/M
3300032043\|Ga0318556_10377651	All Organisms → cellular organisms → Bacteria → Terrabacteria group	741	Open in IMG/M
3300032043\|Ga0318556_10739706	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300032063\|Ga0318504_10010806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3159	Open in IMG/M
3300032065\|Ga0318513_10643226	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300032076\|Ga0306924_11131960	Not Available	851	Open in IMG/M
3300032160\|Ga0311301_12817334	Not Available	530	Open in IMG/M
3300032261\|Ga0306920_102552861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300032897\|Ga0335071_10261374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	1684	Open in IMG/M
3300033158\|Ga0335077_10415864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1441	Open in IMG/M
3300033158\|Ga0335077_10534463	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.52%
Aquatic	Environmental → Aquatic	6.54%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.52%
Freshwater	Environmental → Aquatic → Freshwater	4.67%
Sediment	Environmental → Aquatic → Sediment	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	5.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.02%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004613	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 25 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068937_12303451	3300004613	Peatlands Soil	VTGDEQDPAAYAADIDAARERMIGFVSGCSDEEWGSAPLDGDPRPVAVVVDHVAHAYEYLAGWISQLVAGQPVEVNSGVVDALNAEHARDA
Ga0066823_100747572	3300005163	Soil	MGEDTRSPAELAADIDAARERLAGFVGSCTDADWRSAPLDGDPRPVGLVVDHVADAYEYLAGWIRQLVAGQPVDVNNEVVDALNAEHARTAGSVTRA
Ga0070696_1008879692	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGEDTRSPAELAADIDAARERLAGFVAGCTDTDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWMRQLVAGQPVDVNNEVV
Ga0066903_1007136664	3300005764	Tropical Forest Soil	VAFVTEDDRAPAAYAADIEAARDRLIAFAAGCSEEGWRAAPLDGDPRPVAVVVDHVADSYEYLAGWIRQLVAGQSVEVTGEIVDDLNAEHAAEASAVSQADAV
Ga0070766_105764551	3300005921	Soil	MCRAAFVTDDERDPAAYAADIDAARERMIGFVSGCTDEEWGAAPLNADPRPVAVVVDHVAHAYEYLAGWISQLVAGQ
Ga0070766_107826201	3300005921	Soil	VTEDTRDPATYAAEIEAARDRLIAFASGCPDVQWRAAPLDGDPRPVAVVVDHVAHSYEYMSGWIRQAVAGQPVQVTEDQVDGLNAE
Ga0075017_1012066982	3300006059	Watersheds	VTDDERDPAAYAADIDAARERMIGFASGCSDEEWRAAPLDGDPRPVAVVVDHVAHAYEYMAGWISQFVAGQPVEVNSGVVDALNA
Ga0075014_1005629521	3300006174	Watersheds	MAEDTRSPAAYAADIDAARERMIAFVGGCSDKEWRTAPLNGDPRPVAVVVDHVAHAYEYLAGWMRQIVAGQRVEVTSDAVDDLNAQHARDAVAVSKVERRSTCAAAG*
Ga0116214_14112842	3300009520	Peatlands Soil	VAFVTGDEQDPAAFAADIDAARERMIGFVSGCSDEEWGSAPLDGDPRPVAVVVDHVAHAYEYLAGWISQLVAGQPVEVNSGVVDALNAQHA
Ga0116217_105348231	3300009700	Peatlands Soil	VTGDEQDPAAYAADIDAARERMIGFVSGCSDEEWASAPLAGDPRPVAVVVDHVAHAYEYLASWISQLVAGQPVEVNSGVVDSLNAQHAR
Ga0074045_103579822	3300010341	Bog Forest Soil	MIAFVSGCSDEEWHAAPLDGDPRPVAVVVDHVAHAYEYLAGWMRQIVAGQRVEVNSDAVDALNAQHALDAAAVSKVEATGHLRRSGVAISGLVAGLSAADLAAEDGRVRRLA
Ga0126370_105677602	3300010358	Tropical Forest Soil	MQEDARSPAELAADIDAARKRLIGFVDGCTDAQWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQPVEVDGGVVDTLNAHA
Ga0126370_116068302	3300010358	Tropical Forest Soil	MQNERSPAEFAAGIDAARDRLIGFVDSCTDGDWRSAPLGGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQ
Ga0105239_132076891	3300010375	Corn Rhizosphere	MGEDTRSPAELAADIDAARERLAGFVAGCTDTDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWMRQLVAGQPV
Ga0136449_1020884082	3300010379	Peatlands Soil	VTGDEQDPAAYAADIDAARERMIGFVSGCSDEEWASAPLAGDPRPVAVVVDHVAHAYEYLASWISQLVAGQPVEVNSGVVDSLNAQHARHAAAVGKTEATEHLRRSGGAISVLVAGLSP
Ga0136449_1021629782	3300010379	Peatlands Soil	VTGDEQDPAAYAADIDAARERMIGFVHGCSDEEWASAPLAVAGDPRPVAVVVDHVAHAYEYLAGWIGQLVAGQPVEVNSGVVDSLNAQHARDATAVSKTDATEHLRRSGG
Ga0126369_104996151	3300012971	Tropical Forest Soil	MKEDVRSPAELAVDIDAARERLIGFVDGCTDAQWHSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQPVEVDGEVVDALNAE
Ga0126369_127172761	3300012971	Tropical Forest Soil	MQNERSPAEFAAGIDAARGRLIGFVDGCTDGDWRSAPLDGDPRPVGVVVDHVADAYEYLAEWIRQLVAGQPVEVNGDVVDALNAEHARAAASVSRAEATGH
Ga0182032_103182121	3300016357	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEV
Ga0182040_106190692	3300016387	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRELVAGQPVEVNGDVVDALNAEHAR
Ga0187806_11399181	3300017928	Freshwater Sediment	VADEARDPAAYAADIDAARERMIAFAGSCTEQEWRAAPLDGDPRPVAVVVDHVADAYDYLAGWIREIVAGQQVEVNGDVVDALNARHALAAAAVTRADATDHLQR
Ga0187779_108432812	3300017959	Tropical Peatland	MQNERSPAEFAAGIDAARDRLIGFVDGCTDADWRSAPLAGDPRSVAVVVDHVAHAYEYLGGWIRQLVAGPRRCRSVRFRHA
Ga0187780_111394231	3300017973	Tropical Peatland	VRAPAAYAADIDAARERMIAFVGHCSEQEWRAAPLDGDPRPVAVVVDHVADAYDYLARWMRQIVAGQQVEVNSDVV
Ga0187767_103287932	3300017999	Tropical Peatland	MQEDERSPVELAADIDAARERLIGFVAGCTDADWRSAPLDGDPRPVGVVVDHVAHAYEYLGGWIRELAAGQPVEVSGEAVDALNAEHARAAASVTRAEAT
Ga0187815_101385622	3300018001	Freshwater Sediment	VAEDERPPAAYAADIEAARDRLLAFAGACSEAEWLAAPLNGDPRPVAVVVDHVADSYEYLAGFIRQLVVGQPVEVTGEIVDDLNAEHAAQAA
Ga0187804_101099553	3300018006	Freshwater Sediment	VAEDERPPAAYAADIEAARDRLLAFAGACSEAEWLAAPLNGDPRPVAVVVDHVADSYEYLAGFIRQLVAGQPVEVTGEIVD
Ga0187883_107264251	3300018037	Peatland	VTGDEQDPAAYAADIDAARERMIGFVKGCSDEEWASAPLAAAGDPRPVAVVADHVAHAYEYLAGWIAQLVAGQPVEVNSGVVDSLNAQHARDATAVSKTEATEHLRRSGGAISVLVAGLS
Ga0187890_104912721	3300018044	Peatland	VTGDEQDPAAYAADIDAARERMIGFVKGCSDEEWASAPLAAAGDPRPVAVVADHVAHAYEYLAGWIAQLVAGQPVEVNSGVVDS
Ga0187766_110405442	3300018058	Tropical Peatland	MADDAQDAAAYAASIDAAADRLIGFVTGCRDEDWRSAPLAGDPRPVAVVVDHVAHAYEYLGGWIRQLVAGQPVDVNGAVVDALNARH
Ga0187765_108545432	3300018060	Tropical Peatland	MDEDTTSPAELAAGIDAARDRLIGFVQGCTDAQWRSAPLEGDPRPVGVVVDHVADAYEYLAEWIRQLAAGQPVE
Ga0187765_109124051	3300018060	Tropical Peatland	MGEDTRSPAELAADIDAARERLAGFVGSCTDADWRSSPLDGDPRPVGVVVDHVAHSYEYLAGWMRQLVAGQPVEVNNEVVDALNAEHAQ
Ga0187772_114543552	3300018085	Tropical Peatland	MDEDERDPAAYAADIGAARDRMIAFVAGCGEQEWRSAPLDGDPRPVGVVVDHVADAYDYLAGFIRQIVAGQQVELNSDVVD
Ga0210404_106708881	3300021088	Soil	VTEDTRDPATYAAEIEAARDRLIAFASGCPDVQWRAAPLDGDPRPVAVVVDHVAHSYEYMSGWIRQAVAGQPVQVTEDQVDGLNAEHAAASAAVSQA
Ga0210388_113306092	3300021181	Soil	VTDDERDPAAYAADIDAARDRMIGFVSGCGDEEWRAAPLDGDPRPVAVVVDHVAHAYEYLAGWISQLVAGQPVEVDSDVVDALNAQHARDAKAVSRDEATEHLRRSGSAISVLVAGLGP
Ga0210397_101451641	3300021403	Soil	MCRAAFVTDDERDPAAYAADIDAARERMIGFVSGCSDEEWGAAPLKADPRPVAVVVDHVAHAYEYLAGWISQFVAGQSVEVNGSVVDALN
Ga0210386_113798791	3300021406	Soil	MCRAAFVTDDERDPAAYAADIDAARERMIGFVSGCSDEEWGAAPLNADPRPVAVVVDHVAHAYEYMAGWISQLVAGQSVEVNSSVVDALNAQHARDATAVSKTEATGHLRRSGEAISVLVAGLS
Ga0210394_106289431	3300021420	Soil	MCRAAFVTDDERDPAAYAADIDAARERMIGFVSGCSDEEWGAAPLNADPRPVAVVVDHVAHAYEYMAGWISQLVAGQSVEVNGSVVDALNAQHARDATAVSKTEAT
Ga0210391_106204301	3300021433	Soil	MCRAAFVTDDERDPAAYAADIDAARERMIGFVSGCSDEEWGAAPLNADPRPVAVVVDHVAHAYEYMAGWISQLVAGQSVEVNSSVVDALNAQHARDATAVSNTGATGHLPR
Ga0210390_104230412	3300021474	Soil	VTDDERDPAAYAADIDAARERMIGFVSGCSDEEWGAAPLKADPRPVAVVVDHVAHAYEYLAGWISQFVAGQSVEVNGSVVD
Ga0210398_106235422	3300021477	Soil	VTDDERDPAAYAADIDAARERMIGFVSGCTDEEWGAAPLNADPRPVAVVVDHVAHAYEYMAGWISQLVAGQSVEVNGSVVDALNAQHARDATAVSKTEATGHLRRSGEA
Ga0126371_113407662	3300021560	Tropical Forest Soil	MGEDTRSPAELAADIDAARERLTGFVGSCTDADWHSAPLHGDPRPVGVVVDHVAHAYEYLAGWMRQLVAGQPVEVDSEVVDELNAEHARAAGSVTRADAAGHLRRSGTDIAALVAG
Ga0126371_116470872	3300021560	Tropical Forest Soil	MQNERSPAEFAAGIDAARDRLIGFVDSCTDGDWRSAPLGGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQPVEVNGEVVDALNAEHARAAASVS
Ga0126371_121769392	3300021560	Tropical Forest Soil	MQNERSPAEFAAGIDAARDRLIGFVDGCTDADWRSAPLDGDPRPVGVVVDHVADAYEYLAGWIRQLVAGQPVEVNGEVVDALNAEHARAAASVS
Ga0207928_10426581	3300025494	Arctic Peat Soil	MAQEVRSPAAYAADIDAAKDRMISFVDGCIDEDWHAAPVDGDPRPVAVIVDHVAHAYEYLAGWIRQIVVGQQVEINSDVVDALNAQHAREAAAVSKAEAAVHLSRNGAAV
Ga0207653_102122931	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MGEDTRSPAELAADIDAARERLAGFVAGCTDTDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWMRQPVAGQPVD
Ga0209839_102085621	3300026294	Soil	MAQEVRSPAAYAAGIDAAKDRMISFVDGCTDEDWHAAPVDGDPRPVAVIVDHVAHAYEYLAGWIRQIVVGQQVEINSDVVDALNAQHAREAAAVSKAGAAVHLRRNGAAISGLV
Ga0208324_11946172	3300027604	Peatlands Soil	MPLCRVALVAEDVRSPAAYAADIDAARERMIAFVGGCSDKEWRAAPLNGDPRPVAVVVDHVAHAYEYLAGWMRQIVAG
Ga0209275_106082342	3300027884	Soil	MTDEERDPAGCAADIDAARERIIAFVSGCTEDEWRAAPLDGDPRPVSVVVDHVADAYDYLAGWIRRIVAGEPVEVTSDILDA
Ga0307482_10411832	3300030730	Hardwood Forest Soil	VTEDERDAAAYAADIEAARDRLIVFASGCSEAQWRAAPLDGDPRPVAVVVDHVADSYEYLAGFIRQILAGQAAEVTGE
Ga0318516_102751062	3300031543	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVNGEVVDALNAEHARDQLAY
Ga0318516_105129622	3300031543	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEASGHLHRSGTAISALVANLSAAGLQLGGG
Ga0318534_102039504	3300031544	Soil	MGGFVAGETRDPAAYAADIDAARDRMIAFVGSCTEQEWSAAPLDGDPRPVAVVVDHVADAYDYLAGWMRQMVAGQRVEVDSDVVDALNARHALAA
Ga0318534_102342751	3300031544	Soil	VAFVTEDDRAPAAYAADIEAARDRLITFAVGCSEEEWRAAPLDGDPRPVAVVVDHVADSYEYLAGWIRQLVAGQPVEVTSEIVDDLNAKH
Ga0318538_101431734	3300031546	Soil	MGGFVAGETRDPAAYAADIDAARDRMIAFVGSCTEQEWSAAPLDGDPRPVAVVVDHVADAYDYLAGWMRQMVAGQVVI
Ga0318573_105880572	3300031564	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAAVSRAE
Ga0318515_105492191	3300031572	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEASGHLHRSGTAISALVAN
Ga0310915_106088332	3300031573	Soil	MGGFVAGETRDPAAYAADIDAARDRMIAFVGSCTEQEWSAAPLDGDPRPVAVVVDHVADAYDYLAGWMRQMVAGQRVEVDSDVVDALNARHAL
Ga0318555_102138121	3300031640	Soil	MGGFVAGETRDPAAYAADIDAARDRMIAFVGSCTEQEWSAAPLDGDPRPVAVVVDHVADAYDYLAGWMRQMVAGQRVEVDSDV
Ga0318555_102168101	3300031640	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVNGEVVDALNAEHARDQLAYP
Ga0318561_101754842	3300031679	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAASAASISDRWSSACVIAI
Ga0318574_101565581	3300031680	Soil	MAGDEQDPAAYAADIDAARDRMIAFMSGCGDGEWRSAPLDADPRPVAVVVDHVAHAYEYLARWISQLVTGETVEVNSDVVD
Ga0318574_105966091	3300031680	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEASGHLHRSGTAISALVA
Ga0318572_103199851	3300031681	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEASGHLHRSGTAISALVANL
Ga0318560_105418992	3300031682	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEASGHLHRSGT
Ga0318560_108102861	3300031682	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVNGEVVDALNAEHARAAAAVQV
Ga0318502_102963691	3300031747	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVS
Ga0318509_108121531	3300031768	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVE
Ga0318546_100331554	3300031771	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAAVSRA
Ga0318543_103148242	3300031777	Soil	MGGFVAGETRDPAAYAADIDAARDRMIAFVGSCTEQEWSAAPLDGDPRPVAVVVDHVADAYDYLAGWMRQMVAGQRVEVDSDVVD
Ga0318543_105766581	3300031777	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVNGEVVDALNAEHARAAAAVSR
Ga0318498_105035431	3300031778	Soil	MLGGMSEDARGPARYAAEIDEARERLVAFAGGLGDEQWHAAPLDGDPRPVGVVVDHVAHAYEYLAGWMRQILDGQTAAVSGEVVDALNAEHAARA
Ga0318547_103841012	3300031781	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVV
Ga0318552_105599462	3300031782	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAK
Ga0318548_101536034	3300031793	Soil	MGGFVAGETRDPAAYAADIDAARDRMIAFVGSCTEQEWSAAPLDGDPRPVAVVVDHVADAYDYLAGWMRQMVAGQRVEVDSDVVDALNA
Ga0318548_104248861	3300031793	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSR
Ga0318503_101708361	3300031794	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVNGEVVDALNAEHARAAAAVSRAEATGHLHRSGTAISA
Ga0318576_103763081	3300031796	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVHD
Ga0318550_102526511	3300031797	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEASGHLHRSGTAISA
Ga0318565_100819311	3300031799	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEASGHLHRSGTAIS
Ga0318567_101294254	3300031821	Soil	MGGFVAGETRDPAAYAADIDAARDRMIAFVGSCTEQEWSAAPLDGDPRPVAVVVDHVADAYDYLAGWMRQMVAGQRVEVDSDVVDALNARHALT
Ga0318567_107570142	3300031821	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAE
Ga0318517_105306462	3300031835	Soil	VAFVTEDDRAPAAYAADIEAARDRLITFAVGCSEEEWRAAPLDGDPRPVAVVVDHVADSYEYLAGWIRQLVAGQPVEVTSEIVDDL
Ga0318511_102691912	3300031845	Soil	MLGGMSEDARGPARYAAEIDEARERLVAFAGGLGDEQWHAAPLDGDPRPVGVVVDHVAHAYEYLAGWMRQILDGQTAAVSGEVVDA
Ga0318512_101978691	3300031846	Soil	MSCSVAFVTEDDRTPAAYAADIEAARDRLIAFAVGCTEEEWRAAPLDGDPRPVAVVVDHVADSYEYLAGWIRQLVAGQVLVG
Ga0318527_101359973	3300031859	Soil	MGGFVAGETRDPAAYAADIDAARDRMIAFVGSCTEQEWSAAPLDGDPRPVAVVVDHVADAYDYLAGWMRQMVAGQRVEVDSDVV
Ga0306919_101976262	3300031879	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVNGEVVDALN
Ga0318536_104832092	3300031893	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEA
Ga0318522_103537081	3300031894	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRA
Ga0318551_104096681	3300031896	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVNGEVVDALNAEHARAAAAVSRAEATGHLHRSG
Ga0306921_116159342	3300031912	Soil	MSCSVAFVTEDDRTPAAYAADIEAARDRLIAFAVGCTEEEWRAAPLDGDPRPVAVVVDHVAHSYEYLAGWIRQLVAGQPVEVT
Ga0310912_109599382	3300031941	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEASGHLHR
Ga0318530_102628271	3300031959	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDADWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQPVEVNGEVVDALNAEHARAAAEVSRAEATGHLHRSGTA
Ga0306922_101983551	3300032001	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEH
Ga0318562_107306451	3300032008	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAEASGH
Ga0318569_103685761	3300032010	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEV
Ga0318549_102366131	3300032041	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALN
Ga0318549_103234302	3300032041	Soil	MGGFVAGETRDPAAYAADIDAARDRMIAFVGSCTEQEWSAAPLDGDPRPVAVVVDHVADAYDYLAGWMRQMVAGQRVEVDSDVVDALNARHALTW
Ga0318556_103776512	3300032043	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVDALNAEHARAAAKVSRAE
Ga0318556_107397061	3300032043	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVNGEVVDALNAEHARAAAAVSRAEATGHLHRS
Ga0318504_100108061	3300032063	Soil	MQNERSPAEFAAGIDAGRDRLIGFVDGCTDVDWRSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGEPVEVNGEVVDALNAEHARAAAAVSRAEATGHLHRSGTAISALVTN
Ga0318513_106432262	3300032065	Soil	MQNERSPAAFAAAIDAGRDRLIGFVDGCTDVDWCSAPLDGDPRPVGVVVDHVAHAYEYLAGWIRQLVAGQSVEVNGEVVD
Ga0306924_111319602	3300032076	Soil	VARSGIRLAFVTDEARAPAAYAADIDAARERMIVFVGSCTEQEWRAAPLDGDPRPVAVVADHVADAYDYLAGWIRQIVVGQQVEVNSDVVDALNARHALAAAAVTRADATDHLRRSGTAISDLVAGLS
Ga0311301_128173342	3300032160	Peatlands Soil	VTGDEQDPAAYAADIDAASERMIGFVNGCSDEEWASAPLAVTGDPRPMAVVVDHVAHAYEYLAGWIGQLVAGQPVEVNSGVVDSLNAQHARDATAVSKTEATEHLRRSGGAIS
Ga0306920_1025528611	3300032261	Soil	MADDERDPAAYAADIDAARDRMIGFVSGCGDAEWRSAPLDGDPRPVAVVVDHVAHAYEYLAGWISQLVAGETVEVNSDVVDALNA
Ga0335071_102613741	3300032897	Soil	VPDDLPDPAAYAADIDAARDRMIGFVSGCSDQDWRAAPLDGDPRPVAVVVDHVAHAYEYLAGWIREFVAGEPV
Ga0335077_104158643	3300033158	Soil	MGEDTRSPAELAADIDAARERLGGFVSSCTDAGWCSAPLDGDPRPVGVVVDHVAHAYEYLGGWMRQLVAGEPVEVNGEVVDAL
Ga0335077_105344632	3300033158	Soil	MGEDTRSPAELAADIDAARERLAGFVGSCSDADWHSAPLDGDPRPVGVVVDHVAHAYEYLAGWMRQLVAGQPADVSSEI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092521

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences