Metagenome / Metatranscriptome Family F092523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092523
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	74 residues
Representative Sequence	DNGPRADPNYKGKGLQIELTVEDKGAFTMPWSATVTFRRALDEWTELVCAENQQWHPGTYSEVPIADKPDF
Number of Associated Samples	86
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.61 %
% of genes near scaffold ends (potentially truncated)	90.65 %
% of genes from short scaffolds (< 2000 bps)	96.26 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.178 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.168 % of family members)
Environment Ontology (ENVO)	Unclassified (36.449 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.355 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 5.05% Coil/Unstructured: 94.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03401	TctC	6.54
PF02126	PTE	2.80
PF13565	HTH_32	1.87
PF13360	PQQ_2	1.87
PF00072	Response_reg	0.93
PF01979	Amidohydro_1	0.93
PF00903	Glyoxalase	0.93
PF13699	DUF4157	0.93
PF00027	cNMP_binding	0.93
PF01609	DDE_Tnp_1	0.93
PF00005	ABC_tran	0.93
PF03069	FmdA_AmdA	0.93
PF06823	DUF1236	0.93
PF01638	HxlR	0.93
PF02776	TPP_enzyme_N	0.93
PF00296	Bac_luciferase	0.93
PF13358	DDE_3	0.93
PF01977	UbiD	0.93
PF07690	MFS_1	0.93
PF08447	PAS_3	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	6.54
COG1735	Predicted metal-dependent hydrolase, phosphotriesterase family	General function prediction only [R]	2.80
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.93
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.93
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.93
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.93
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.93
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.93
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.93
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.93
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.18 %
Unclassified	root	N/A	16.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.18 %
Unclassified	root	N/A	16.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.18 %
Unclassified	root	N/A	16.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.10 %
Unclassified	root	N/A	16.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.89 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	13.08 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.56 %
Unclassified	root	N/A	16.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.89 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	12.15 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.93 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.15 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	12.15 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.93 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	12.15 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	9.35 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	12.15 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	9.35 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	12.15 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	9.35 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.93 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.89 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	12.15 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	9.35 %
Novosphingobium sp. Rr 2-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Rr 2-17	0.93 %
Bradyrhizobium sp. SRS-191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRS-191	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.93 %
uncultured bacterium BLR9	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10238733	Not Available	593	Open in IMG/M
3300004080\|Ga0062385_10066596	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300004080\|Ga0062385_10203450	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300004082\|Ga0062384_100692211	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300004091\|Ga0062387_101341294	Not Available	567	Open in IMG/M
3300004152\|Ga0062386_101775660	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300004633\|Ga0066395_10557699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300004635\|Ga0062388_102534826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300005332\|Ga0066388_102304804	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005332\|Ga0066388_107626288	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300005533\|Ga0070734_10258003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300005563\|Ga0068855_101645145	Not Available	656	Open in IMG/M
3300005764\|Ga0066903_104408718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300005764\|Ga0066903_107858736	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300005952\|Ga0080026_10142550	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	689	Open in IMG/M
3300006052\|Ga0075029_101053652	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300006174\|Ga0075014_100544849	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	656	Open in IMG/M
3300006175\|Ga0070712_100738368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Rr 2-17	842	Open in IMG/M
3300007265\|Ga0099794_10482204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRS-191	652	Open in IMG/M
3300007265\|Ga0099794_10648719	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300009524\|Ga0116225_1525878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	525	Open in IMG/M
3300009683\|Ga0116224_10191587	Not Available	980	Open in IMG/M
3300009683\|Ga0116224_10522473	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	566	Open in IMG/M
3300009792\|Ga0126374_10754605	Not Available	738	Open in IMG/M
3300009839\|Ga0116223_10320055	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300010043\|Ga0126380_11798907	Not Available	554	Open in IMG/M
3300010049\|Ga0123356_10648585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1223	Open in IMG/M
3300010358\|Ga0126370_12318005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010359\|Ga0126376_11569937	Not Available	689	Open in IMG/M
3300010359\|Ga0126376_12151982	Not Available	602	Open in IMG/M
3300010360\|Ga0126372_12544373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300010366\|Ga0126379_12317225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300010376\|Ga0126381_102971038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300010379\|Ga0136449_100281690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3051	Open in IMG/M
3300011120\|Ga0150983_13795920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300012205\|Ga0137362_10078500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2748	Open in IMG/M
3300012923\|Ga0137359_10528115	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300012929\|Ga0137404_10644263	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300012971\|Ga0126369_10989294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300012971\|Ga0126369_13637811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300014201\|Ga0181537_10345196	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300016294\|Ga0182041_11912349	Not Available	551	Open in IMG/M
3300016319\|Ga0182033_11892987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300016341\|Ga0182035_10348341	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300016357\|Ga0182032_10172981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1620	Open in IMG/M
3300016371\|Ga0182034_10371780	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300016371\|Ga0182034_11489637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	593	Open in IMG/M
3300016404\|Ga0182037_10640160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300016422\|Ga0182039_11319471	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	654	Open in IMG/M
3300016422\|Ga0182039_11878852	Not Available	550	Open in IMG/M
3300016445\|Ga0182038_11054166	Not Available	721	Open in IMG/M
3300017943\|Ga0187819_10151388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1381	Open in IMG/M
3300017943\|Ga0187819_10654730	Not Available	594	Open in IMG/M
3300017970\|Ga0187783_11080938	Not Available	578	Open in IMG/M
3300017972\|Ga0187781_11264874	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300018007\|Ga0187805_10215244	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300018085\|Ga0187772_10983480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	616	Open in IMG/M
3300020199\|Ga0179592_10334584	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	668	Open in IMG/M
3300021474\|Ga0210390_10444970	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300021478\|Ga0210402_10320086	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium BLR9	1437	Open in IMG/M
3300021560\|Ga0126371_10289905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1761	Open in IMG/M
3300021560\|Ga0126371_10638514	All Organisms → cellular organisms → Bacteria → Proteobacteria	1213	Open in IMG/M
3300024288\|Ga0179589_10248902	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300026481\|Ga0257155_1008022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1367	Open in IMG/M
3300027070\|Ga0208365_1027812	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300027643\|Ga0209076_1209191	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	533	Open in IMG/M
3300027671\|Ga0209588_1049266	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300027696\|Ga0208696_1197393	Not Available	638	Open in IMG/M
3300027729\|Ga0209248_10160347	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	669	Open in IMG/M
3300029999\|Ga0311339_10642389	Not Available	1049	Open in IMG/M
3300031090\|Ga0265760_10179166	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300031234\|Ga0302325_12022307	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	710	Open in IMG/M
3300031572\|Ga0318515_10727305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031573\|Ga0310915_11206604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300031708\|Ga0310686_111607323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	512	Open in IMG/M
3300031708\|Ga0310686_117023929	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	853	Open in IMG/M
3300031715\|Ga0307476_10114798	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300031718\|Ga0307474_10249454	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300031719\|Ga0306917_11503698	Not Available	518	Open in IMG/M
3300031720\|Ga0307469_12016565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	560	Open in IMG/M
3300031724\|Ga0318500_10557852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	578	Open in IMG/M
3300031744\|Ga0306918_11448713	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300031879\|Ga0306919_10735768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300031879\|Ga0306919_10999518	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	640	Open in IMG/M
3300031879\|Ga0306919_11275580	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031890\|Ga0306925_10160245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2423	Open in IMG/M
3300031896\|Ga0318551_10884547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	521	Open in IMG/M
3300031902\|Ga0302322_103188148	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031910\|Ga0306923_10520938	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300031910\|Ga0306923_11188844	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300031912\|Ga0306921_12751179	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	504	Open in IMG/M
3300031941\|Ga0310912_11401292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	528	Open in IMG/M
3300031947\|Ga0310909_11011129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	679	Open in IMG/M
3300031947\|Ga0310909_11650966	Not Available	507	Open in IMG/M
3300031954\|Ga0306926_11394757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300031954\|Ga0306926_12177321	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	618	Open in IMG/M
3300032001\|Ga0306922_10303405	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
3300032001\|Ga0306922_11845469	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300032039\|Ga0318559_10558759	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	534	Open in IMG/M
3300032059\|Ga0318533_11246604	Not Available	544	Open in IMG/M
3300032076\|Ga0306924_11281880	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300032090\|Ga0318518_10654813	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	535	Open in IMG/M
3300032261\|Ga0306920_100376645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2111	Open in IMG/M
3300032261\|Ga0306920_100772795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1412	Open in IMG/M
3300032261\|Ga0306920_102711033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300032261\|Ga0306920_103201403	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300033289\|Ga0310914_10340513	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.98%
Aquatic	Environmental → Aquatic	12.15%
Arthropoda	Host-Associated → Arthropoda	0.93%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.18%
Freshwater	Environmental → Aquatic → Freshwater	10.28%
Peat	Environmental → Terrestrial → Peat	2.80%
Sediment	Environmental → Aquatic → Sediment	1.87%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.28%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.41%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.93%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102387331	3300000567	Peatlands Soil	YDATMQAIARDAKENFQFVNPDNGLPADPSYKGKGLQIEVTVADEGAYTMPWSATVTLRRAVAEPQELVCADNVLWYPGKNSAVPHADKPDF*
Ga0062385_100665961	3300004080	Bog Forest Soil	VERAAKEHFQNEYPDNGPRPDLDYKGKGLQLQLTADDAGAFTMPWSATVTFRRALDEWAELVCAENPEWYPGTYSAVPKADKPDF*
Ga0062385_102034502	3300004080	Bog Forest Soil	VERAAKEHFQNEYPDNGPRPDPNYKGKGLQVQLTVDDAGAFTMPWTATVTFRRALDEWVELVCAENPEWYPGTYSAVPMADKPDF*
Ga0062384_1006922111	3300004082	Bog Forest Soil	KGLQIQLTVEDEGAFTSPWSATLTFRRALASDEWLELVRPENLQWYPGTYSDVPISQKPDF*
Ga0062387_1013412941	3300004091	Bog Forest Soil	KGKGLQIQLAVEDKGAFTMPWSATLTFRRALDEWRELVCAENTQWHPGVYSEVPTANKPDF*
Ga0062386_1017756601	3300004152	Bog Forest Soil	KGLQIEVTIEDKGAFTTPWSATLTLRRARDERLELVCAENTQWYPGTQSAVPTADKPDF*
Ga0066395_105576992	3300004633	Tropical Forest Soil	MKAVELAAKEHAQSENPGSGPRADPNYKGKGLQIRLTVEDAGAFTMPWSATLTFRRALDEWPELVCAESIQWYPGTYSEVPTANKPDF*
Ga0062388_1025348261	3300004635	Bog Forest Soil	ATTEAIARDAKEHLQLSNPDNGPVVDPNYNGKGLQIHVTIEDKGAFTMPWAATVTLRRALDERLELVCAENPQWYPGMQSAIPTADKPDF*
Ga0066388_1023048041	3300005332	Tropical Forest Soil	EATMNAVERDAKEHLQTNNPDNGPRADPNYKGKGLQIQVTVEDDGAFTMPWSATVTFRRALDERLELVCAENLLWYPGKTSAVPRADKPDF*
Ga0066388_1076262882	3300005332	Tropical Forest Soil	VSSSGKPAALFALSNFNPDNGPPADTNYKGKGLQIQVTVEDEGAFILPWSATVTLRRALDERLELVCADNTQWYPGRHSAVPMADKPDF*
Ga0070734_102580031	3300005533	Surface Soil	KGEGLQIHVTIEDEGVFTTPWTAAITLRRATDERMELVCADNTQWYPGVYSAVPTADKPDF*
Ga0068855_1016451451	3300005563	Corn Rhizosphere	KEHFHQPNPDNGSPADPNYKGKGLQIEVSIEDSGAFTMPWTATVTFRRPVDEQLELVCAENKEWFPGVFSAIPTAEKPDF*
Ga0066903_1044087181	3300005764	Tropical Forest Soil	MDRRLIRATSKGLQINLTVEDKGAFTMPWTATVTLRRALGEWLELVCAENTKWYPETDSAVPVADKPDF*
Ga0066903_1078587361	3300005764	Tropical Forest Soil	HFQQANPDNGPPVDPRYKGNGLQIEVTIEDEGAFTTPWSATVTFRRALDERLELVCAENRQWFPGTYSAIPTADKPDF*
Ga0080026_101425502	3300005952	Permafrost Soil	MKAIERDAKEHVQNANPDNGSPADPNYKGKGLQVQVTVEDEGAFTMPWSANVTLRRAIDERLELVCAENPQWFPGQNSAVPRADKPDF*
Ga0075029_1010536521	3300006052	Watersheds	DNGPRFDPNYRGKGLQIHLTVEDTGAFTMPWTATVTFRRALDDQLELVCAENLQWYPGKESAVPRAEKPDF*
Ga0075014_1005448492	3300006174	Watersheds	MGRKRAALTDGPSGPRADPNYKGKGLQIQLTVEDKGAFTMPWSATLTFRRALDEWRELVCAENTQWYPGIYSEVPTANKPDF*
Ga0070712_1007383681	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PDNGPRADLNYKGKGLQIQLTVEDAGVFTMPWSATVTFRRALDEWPELVCAENPEWYPGAYSEVPTAQKPDF*
Ga0099794_104822041	3300007265	Vadose Zone Soil	QDAKEHFQFANPDNGPAVDPNYKGKGLQIQVIVEDEGAFTMPWSATVTLRRALDERLELVCADNTQWYPGTHSAVPKADKPDF*
Ga0099794_106487191	3300007265	Vadose Zone Soil	DNPGSGPRPDPSHKGKGLQIRLTVEDAGAFTMPWSATLTFRRALDEWRELVCAENTQWHPGTYSEVPIANQPDF*
Ga0116225_15258782	3300009524	Peatlands Soil	PDYKGKGLQIEVTVEDQGAFTMPWSATVTLRRAIDQWLEVVCAENNTQWHPDAYSRVPTAQQPDF*
Ga0116224_101915871	3300009683	Peatlands Soil	YKGKGLQIEVTVADEGAYTMPWSATVTLRRAVAEPQELVCADNVLWYPGKNSAVPHADKPDF*
Ga0116224_105224731	3300009683	Peatlands Soil	LLDYAATKEAIARDAKENFQFASPDNGPAVDPSYQGKGLQIQVTVEDEGAFTMPWTATVTFRRAFDERLELVCAENTQWHPGTYSAVPIAEKPDF*
Ga0126374_107546052	3300009792	Tropical Forest Soil	PRVDPNYNGKGLQILLTVEDAGAFTMPWSASLTFRRALDEWPELVCAESIQWYPGTYSEVPTANKPDF*
Ga0116223_103200551	3300009839	Peatlands Soil	PDNGPAVDPSYQGKGLQIQVTVEDEGAFTTPWTATVTFRRAFDERLELVCAENTQWHPGTHSAVPVADKPDF*
Ga0126380_117989072	3300010043	Tropical Forest Soil	QIELTVTDEGAFTMPWTATITLRRALDEQMERVCADNTQWYPGVYSAVPTADKPDF*
Ga0123356_106485853	3300010049	Termite Gut	ADPNYKGNGLQIQVAIEDEGAFTMPWSATVTFRRALDERLESVCAENLLWYPGKTSAVPSADKPDF*
Ga0126370_123180052	3300010358	Tropical Forest Soil	MNAVERDAKEHLQTNNPDNGPRADPNYKGDGLQIKVTVEDEGTFTMPWSATVTFRRALDEWLELVCAENLLWYPGKTSAVPHADKPDF*
Ga0126376_115699371	3300010359	Tropical Forest Soil	KAVEWAAKEHARSEHPGSGPRADPNYKGKGLQIRITVEDAGAFTMTWSATLTFRRALDEWRELVCAESIQWYPGTYSEVPTANKPDF*
Ga0126376_121519821	3300010359	Tropical Forest Soil	EATMEAIARDAKEHFQFPNPDNGPAVNQNYKGKGLQIQVTVEDKGAFILPWSATLTLRRALDERLELVCADNTQWYPGRHSAVPMADKPDF*
Ga0126372_125443731	3300010360	Tropical Forest Soil	KGLQIQVTVEDEGAFTTPWSATITLRRSRDEWLELVCADNIQWYPGRYSAVPMADKPDF*
Ga0126379_123172252	3300010366	Tropical Forest Soil	GLQIQVTVEDKGAFTMPWSATATFRRALDERLELVCAENIQSHFETHAAVPMADRPDF*
Ga0126381_1029710382	3300010376	Tropical Forest Soil	GLQIHLTVEDTGAFTMPWSATVTLRRAFDERLELVCAENMKWYPDTNAAVPMAATPDF*
Ga0136449_1002816901	3300010379	Peatlands Soil	KAVAWAAKEHFQTDNPDNGPRPDPSYGGKGLQVQLTVVDEGAFTMPWSATVTFRRALDEWREWREHVCAENTQWHPRTYSEVPIANRLDF*
Ga0150983_137959202	3300011120	Forest Soil	KAVAWAGKEHAQSDNPGSGPPADPNYKGKGLQILLTVDDRGAFTMPWSATLTFRRALDEWPELVCAENTQWHPGTYSEVPTANEPDF*
Ga0137362_100785001	3300012205	Vadose Zone Soil	KEHLQTNNPDNGPRADPNYKGKGLQIQVTVEDEGAFTMPWSATVTFRRAFDERLELVCAENLQWYPGKTSAVPRADKPDF*
Ga0137359_105281151	3300012923	Vadose Zone Soil	TMEAMARDAKENFQFANPDNGPAVDPNYKGKGLQIQVTVEDEGAFTVPWSATVTLRRALDERLELVCADNTEWYPGTHSAVPMADKPDF*
Ga0137404_106442632	3300012929	Vadose Zone Soil	LQIHVTVEDDGAFTTPWSATVTFRRALDERLELVCAENPEWYPGKTSAVPRADKPDF*
Ga0126369_109892942	3300012971	Tropical Forest Soil	VDFDYKGKGLQIQVTVEDEGAFTTPWSATITLRRSRDEWLELVCADNIQWYPGRYSAVPMADKPDF*
Ga0126369_136378111	3300012971	Tropical Forest Soil	EHAQSNNPGSGPRIDPNYKGKGLQIQLTVEDAGAFTMPWSASLTFRRALDEWPELVCAESIQWYPGTYSEVPTANKPDF*
Ga0181537_103451962	3300014201	Bog	PAPDLAYKGKALQIEVTIEDSGAFTTPWSATLTLRRARDERLELVCAENTQWYPGTQSAVPTADKPDF*
Ga0182041_119123492	3300016294	Soil	HFQIDNPDNGPLPDPNYKGMGLQIELMVEDAGAFTMRWSATITFRRALDEWPELVCAENTEWYPGTHSEVPTAEKPDF
Ga0182033_118929871	3300016319	Soil	GKGLQIQLTVEDAGVFTMPWSATVTFRRALDEWSELVCAENREWYPGAYSKVPTAQKPDF
Ga0182035_103483411	3300016341	Soil	NYKGKGLQVQLAVEDAGAFTTPWSATVTFRRALDEWPELVCAENPEWYPGVYSTVPTAEKPDF
Ga0182032_101729811	3300016357	Soil	DNGPRPDPNYKGKGLQLELTVDDKGAFTTPWSATVTFRRALDEWAELVCPENQRWHPGTYSEVPIADKPDF
Ga0182034_103717801	3300016371	Soil	LQIQLTVEDAGAFTMPWSATLTFRRALDEWREFVCAESIQWYPGTNSEVPTASKPDF
Ga0182034_114896372	3300016371	Soil	DPDYRGPGLQVELTVEDRGAFTTPWTATVTFQRSFEDWLERVCAENTQWYPGTSSAVPMANKADF
Ga0182037_106401602	3300016404	Soil	MKAVAWAAKEHAQSDNPGSGPRADPNYKGKGLQIQLTVEDAGAFTMPWSATLTFRRALDEWRELVCAESIQWYPGTYSEVPVANKPDF
Ga0182039_113194712	3300016422	Soil	MGRKGAFPKRPAVDPNYKGKGLQIQLIVGDEGAFTMPWSATVTFRRALDEWVELVCPENPQWHPGTYSEV
Ga0182039_118788521	3300016422	Soil	SNNPGSGPRVDPNYKGKGLQIELMVEDAGAFRMPWSASLTFRRALDEWPELVCAESIQWYPGTYSEVPTANKPDF
Ga0182038_110541661	3300016445	Soil	NYKGKGLQIHLTVEDTGAFAMTWTATVTLRRALGEWLELVCAENTKWYPETDSAVPVADKPDF
Ga0187819_101513881	3300017943	Freshwater Sediment	EHSHSDNPGSGPPADPNYKGKGLQIQLTVEDKGAFTMPWSATLTFRRALDEWRELVCAENTQWYPGIYSEVPTANKPDF
Ga0187819_106547301	3300017943	Freshwater Sediment	MKAVEWAAKEHSHSDNPGSGPPADPNYKGKGLQIHLTVEDKGAFTMPWTATLTFRRALDEWRELVCAENIQWHPGTYSEAPTATKPDF
Ga0187783_110809381	3300017970	Tropical Peatland	EATKEAIERDAKENFQYPNPDNGPIVDPHYKGKGLQIQVTVADEGAFTVPWVATVTLRRALDERPELVCAENRQWHPGTYSAAPTAEKADF
Ga0187781_112648741	3300017972	Tropical Peatland	GKGLQIEVTIEDPGAFTVPWSATVTLRRAIDEWLEVVCAENMQWHPGTYSRVPTAQQHEF
Ga0187805_102152441	3300018007	Freshwater Sediment	VDPAYKGKGLQIQVTVEDEGAFTMPWSSTVTLRRALDERLELVCADNTEWYPGTHSAVPMADKPDF
Ga0187772_109834802	3300018085	Tropical Peatland	DIPDNGPRSDPNYKGEGLQVHLTVDDKGAFTMPWSATVTFQRALDDDWPELVCAENTQWHPGTYSDVPIAQEPDF
Ga0179592_103345842	3300020199	Vadose Zone Soil	YEATKEAIEQDAKEHFQFANPDNGPAVDPNYKGKGLQIQVIVEDEGAFTMPWSATVTLRRALDERLELVCADNTQWYPGTHSAVPKADKPDF
Ga0210390_104449701	3300021474	Soil	PNYKGKGLQIQVTIEDIGAFTMPWSATVTFRRALDEWVELVCPENPQWHPGTYSEVPTADKPDF
Ga0210402_103200861	3300021478	Soil	PNYKGTGLQIQLTVEDKGAFTMPWSATLTFRRALDEWRELVCAENIQWHPGTYSEVPTENRPDF
Ga0126371_102899051	3300021560	Tropical Forest Soil	DPNYKGRGLQIRLTVEDAGAFTMPWSATLTFRRALDEWPELVCAESIQWYPGTYSEVPTANKPDF
Ga0126371_106385142	3300021560	Tropical Forest Soil	DNGPRADPNYKGKGLQIELTVEDKGAFTMPWSATVTFRRALDEWTELVCAENQQWHPGTYSEVPIADKPDF
Ga0179589_102489022	3300024288	Vadose Zone Soil	EAIARDAKENFQFANPDNGPAVDPNYKGKGLQIQVTVEDEGAFTVPWSATVTLRRALDERLELVCADNTEWYPGTHSAVPMADKPDF
Ga0257155_10080223	3300026481	Soil	MPNFQFANPDNGSAADPNHKGMGLQIQVTVEDVGAFTMPCSTTVTLRRALDERLELACADNMQWYPGTNSAMPTADKPDFWSGNALDLFRRPMYRT
Ga0208365_10278122	3300027070	Forest Soil	GPRADPNYKGKGLQIQLTVEDKGAFTMPWSATLTFRRALDEWRELVCAENTQWYPGIYSEVPTANEPDF
Ga0209076_12091912	3300027643	Vadose Zone Soil	LLDYEATKEAIEQDAKEHFQFANPDNGPAVDPNYKGKGLQIQVIVEDEGAFTMPWSATVTLRRALDERLELVCADNTQWYPGTHSAVPKADKPDF
Ga0209588_10492661	3300027671	Vadose Zone Soil	AVDPNYKGKGLQIQVIVEDEGAFTMPWSATVTLRRALDERLELVCADNTQWYPGTHSAVPKADKPDF
Ga0208696_11973932	3300027696	Peatlands Soil	YKGKGLQIEVTVADEGAYTMPWSATVTLRRAVAEPQELVCADNVLWYPGKNSAVPHADKPDF
Ga0209248_101603471	3300027729	Bog Forest Soil	AKEHFQNEYPDNGPRPDLDYKGKGLQLQLTADDAGAFTMPWSATVTFRRALDEWAELVCAENPEWYPGTYSAVPKADKPDF
Ga0311339_106423891	3300029999	Palsa	PDNGPPADPNYKGKGLQIEFLIDDEGAFAMPWTATVTLRRAIEESLELVCADNPLWHPGTYSNVPAADRPDF
Ga0265760_101791662	3300031090	Soil	AKEHFQNEYPDNGPRPDPDYKGKGLQVQLTVDDAAAFTMPWSATVTFRRALDEWVELVCAENREWYPGTYSEVPTADKPDF
Ga0302325_120223071	3300031234	Palsa	FQFPNPDNGPPADPNYKGKGLQIEFLIEDEGAFAMPWTATVTLRRAIEESLELVCADNPLWHPGTYSNVPAADRPDF
Ga0318515_107273052	3300031572	Soil	GSGPRVDPNYKGKGLQIRLTVEDAGAFTMPWSASLTFRRALDEWPELVCAESIQWYPGTYSEVPVANKPDF
Ga0310915_112066043	3300031573	Soil	FNYRGKGLQIQLTVEDEGAFTSPWSATLTFRRALASDEWLELVCPENLQWYPGAYSDVPIAQKPDF
Ga0310686_1116073231	3300031708	Soil	ERAAEEHFQFDDADIDNGPRPDPNYRGEGLQIELTVEDEGAFTTPWSATVTFRRALDEWLELVCSENPEWYPRTYSAVPFAEKPDF
Ga0310686_1170239292	3300031708	Soil	HSQSDNPGSGPRADPNYKGKGLQILLTVEDKGAFTMPWSATLTFRRALNEWRELVCAENIQWHPGTYSEVPTADKPDF
Ga0307476_101147981	3300031715	Hardwood Forest Soil	TKEAIERDAKENFQFANPDNGPAVDPNYKGKGLQIQVTVEDEGAFAMPWSATVTLRRALDERLELVCADNTEWYPGTHSAVPMADKPDF
Ga0307474_102494541	3300031718	Hardwood Forest Soil	AKENFQFANPDNGPAVDPNYKGKGLQIQVTVEDDGAFAMPWSATVTLRRALDERLELVCADNTEWYPGTHSAVPMADKPDF
Ga0306917_115036981	3300031719	Soil	VPVAVPDNGPRADPNCKGKGLQIELTVEDKGAFAMPWSATVTFRHALDSDEWLELVCPENRQWHPGTYSDVPTEGKPDF
Ga0307469_120165652	3300031720	Hardwood Forest Soil	NPDNGPPFDPNYKGEGLQIEVSVEDKGAFTTPWSATITLRRALDEQLELVCAENRQWYPGKNAAVPMADKPDF
Ga0318500_105578521	3300031724	Soil	PRADPNYKGKGLQIRLTVEDAGAFTMPWSATLTFRRALDDRRALDEWRELVCAENIQWYPGTYSEVPTANKPDF
Ga0306918_114487131	3300031744	Soil	PVAVPDNGPRADPNCKGKGLQIELTVEDKGAFAMPWSATVTFRHALDSDEWLELVCPENRQWHPGTYSDVPTEGKPDF
Ga0306919_107357682	3300031879	Soil	LPDPDYKGKGLQIELMVEDAGAFTMPWSATITFRRALDERPELVCAEDTQWYPGTYSEVPTAQRPDF
Ga0306919_109995181	3300031879	Soil	IQLTVEDKGAFTMPWSATLTFRRALDEWRELVCAENTQWYPGTYSEVPTANKPDF
Ga0306919_112755801	3300031879	Soil	EHAVSDNPGSGPRADPNYKGKGLQIQLTVEDAGAFTMPWSATLTFRRALDEWRELVCAESIQWYPGTNSEVPTASKPDF
Ga0306925_101602452	3300031890	Soil	VGHRGTIDYDAIQAAIARDAKENLQQPNPDNGPRVDPNYKGKGLQIEVTIEDPGAFTVPWSATVTLRRAIDEWLEVVCAENMQWHPGTYSRVPMAQQHEF
Ga0318551_108845472	3300031896	Soil	DNPDNGPRPDPNYKGRGLQLELTVDDKGAFTMPWSATVTFRRALDEWVELVCPENQRWHPGTYSEVPIADKPDF
Ga0302322_1031881482	3300031902	Fen	KGKGLQIHLTVEDTGAFTMPWTATVTFRRALDDQLELVCAENLQWYPGKESAVPRADKPD
Ga0306923_105209381	3300031910	Soil	LFQFIPDIDPPDNGPRADFNYKGKGLQIQLTVEDEGAFTSPWSATLTFRRALASDEWLELVCPENLQWYPGAYSDVPIAQKPDF
Ga0306923_111888441	3300031910	Soil	QSDNPGSGPRADPNYKGKGLQIQLTVEDAGAFTMPWSATLTFRRALDEWRELVCAESIQWYPGTYSEVPVANKPDF
Ga0306921_127511791	3300031912	Soil	PDNGPLPDPNYKGKGLQIELMVEDAGSFTMPWSATITFQRALDEWRELVCAENIQWYPGTYSEVPTANKPDF
Ga0310912_114012922	3300031941	Soil	DYRGPGLQVELTVEDRGAFTTPWTATVTFQRSFEDWLERVCAENTQWYPGTSSAVPMANKADF
Ga0310909_110111291	3300031947	Soil	QLTVEDEGAFTSPWSATLTFRRALASDEWLELVCPENLQWYPGAYSDVPIAQKPDF
Ga0310909_116509661	3300031947	Soil	DNGPLPDPNYKGKGLQIELMVEDAGAFTMRWSATITFRRALDEWPELVCAENTEWYPGTHSEVPTAEKPDF
Ga0306926_113947572	3300031954	Soil	IQLTVEDAGAFTMPWSATLTFRRALDEWRELVCAESIQWYPGTYSEVPVANKPDF
Ga0306926_121773211	3300031954	Soil	MKAVAWAAKEHSLTGGPSGPRADPNYKGKGLQIQLTVEDKGAFTMAWSATLTFRRALDEWRELVCAENTEWYPGVYSEVPTANKPDF
Ga0306922_103034052	3300032001	Soil	PNYKGKGLQLELTVDDKGAFTMPWSATVTFRRALDEWAELVCPENQRWHPGTYSEVPIAEKPDF
Ga0306922_118454691	3300032001	Soil	PRADPNYKGKGLQIQLTVEDAGAFTMPWSATLTFRRALDEWRELVCAESIQWYPGTNSEVPTASKPDF
Ga0318559_105587591	3300032039	Soil	GKGLQIELTVEDKGAFTTPWSATVTLRRALDAWVERALDAWVEHVCPDNRQWYPGTYSEVPTAEKPDF
Ga0318533_112466041	3300032059	Soil	DPNYKGKGLQILLTVEDAGAFTMPWSASLTFRRALDEWPELVCAESIQWYPGTYSEVPTASKPDF
Ga0306924_112818802	3300032076	Soil	GLQIELRVEDAGAFTMPWSATITFRRALDERPELVCAEDTQWYPGTYSEVPTAQKPDF
Ga0318518_106548131	3300032090	Soil	GKGLQIQLTVEDKGAFTMPWSATLTFRRALDEWRELVCAENTQWHPGTYSEVPTANKPDF
Ga0306920_1003766451	3300032261	Soil	FQFDNPDNGALPDPDYRGPGLQVELTVEDRGAFTTPWTATVTFQRSFEDWLERVCAENTQWYPGTSSAVPMANKADF
Ga0306920_1007727951	3300032261	Soil	LAAKEHAQSENPGSGPRADPTYKGRGLQIRLTVEDAGAFTMPWSATLTFRRALDEWPELVCAESIQWYPGTYSEVPTANKPDF
Ga0306920_1027110331	3300032261	Soil	NGPRADFNYKGKGLQIQLTVEDEGAFTSPWSATLTFRRALASDEWLELVCPENRQWYPGAYSDVPIAQKPDF
Ga0306920_1032014031	3300032261	Soil	DIDPPDNGPRADFNYKGKGLQIQLTVEDEGAFTSPWSATLTFRRALASDEWLELVCPENLQWYPGAYSDVPIAQKPDF
Ga0310914_103405132	3300033289	Soil	SGPRVDPNYKGKGLQIELMVEDAGAFRMPWSASLTFRRALDEWPELVCAESIQWYPGTYSEVPTANKPDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092523

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences