Metagenome / Metatranscriptome Family F092539

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F092539
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	124 residues
Representative Sequence	MSTTVRRLLVLCALAPLGCVLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Number of Associated Samples	92
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.38 %
% of genes near scaffold ends (potentially truncated)	33.64 %
% of genes from short scaffolds (< 2000 bps)	68.22 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (50.467 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (19.626 % of family members)
Environment Ontology (ENVO)	Unclassified (42.991 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.664 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.82% β-sheet: 15.19% Coil/Unstructured: 68.99%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13645	YkuD_2	2.80
PF03544	TonB_C	2.80
PF00929	RNase_T	1.87
PF06906	DUF1272	1.87
PF01979	Amidohydro_1	1.87
PF13396	PLDc_N	1.87
PF01740	STAS	1.87
PF01355	HIPIP	1.87
PF01244	Peptidase_M19	1.87
PF08348	PAS_6	0.93
PF01790	LGT	0.93
PF04255	DUF433	0.93
PF00912	Transgly	0.93
PF13432	TPR_16	0.93
PF13474	SnoaL_3	0.93
PF01443	Viral_helicase1	0.93
PF00583	Acetyltransf_1	0.93
PF05598	DUF772	0.93
PF13011	LZ_Tnp_IS481	0.93
PF08837	DUF1810	0.93
PF13586	DDE_Tnp_1_2	0.93
PF01494	FAD_binding_3	0.93
PF06414	Zeta_toxin	0.93
PF08450	SGL	0.93
PF02798	GST_N	0.93
PF01955	CbiZ	0.93
PF07592	DDE_Tnp_ISAZ013	0.93
PF00528	BPD_transp_1	0.93
PF00076	RRM_1	0.93
PF00593	TonB_dep_Rec	0.93
PF02517	Rce1-like	0.93
PF07676	PD40	0.93
PF14534	DUF4440	0.93
PF07719	TPR_2	0.93
PF07883	Cupin_2	0.93
PF05960	DUF885	0.93
PF00724	Oxidored_FMN	0.93
PF13924	Lipocalin_5	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.80
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.87
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	1.87
COG3813	Uncharacterized conserved protein, DUF1272 domain	Function unknown [S]	1.87
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.93
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.93
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.93
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG1865	Adenosylcobinamide amidohydrolase	Coenzyme transport and metabolism [H]	0.93
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.93
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.93
COG2964	Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains	Transcription [K]	0.93
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.93
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.93
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.93
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.93
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.93
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.93
COG5579	Uncharacterized conserved protein, DUF1810 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
All Organisms	root	All Organisms	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
cellular organisms	root	All Organisms → cellular organisms	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.10 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.54 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.80 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.80 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.87 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.87 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.80 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.87 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.87 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.80 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.87 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.87 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.93 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.80 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	1.87 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.87 %
unclassified Burkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia	0.93 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.80 %
Pseudomonas sp. SCB32	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. SCB32	1.87 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.87 %
Agrobacterium tumefaciens complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium tumefaciens complex	0.93 %
Burkholderia sp. L27(2015)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. L27(2015)	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.80 %
Pseudomonas sp. SCB32	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. SCB32	1.87 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.87 %
Agrobacterium tumefaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium tumefaciens complex → Agrobacterium tumefaciens	0.93 %
Burkholderia sp. L27(2015)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. L27(2015)	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10001038	All Organisms → cellular organisms → Bacteria → Proteobacteria	21016	Open in IMG/M
3300000567\|JGI12270J11330_10115383	Not Available	1113	Open in IMG/M
3300001356\|JGI12269J14319_10000509	All Organisms → cellular organisms → Bacteria	37336	Open in IMG/M
3300004092\|Ga0062389_101516719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	853	Open in IMG/M
3300004092\|Ga0062389_104282482	Not Available	537	Open in IMG/M
3300004635\|Ga0062388_101847039	Not Available	621	Open in IMG/M
3300005591\|Ga0070761_10139876	Not Available	1414	Open in IMG/M
3300005591\|Ga0070761_10269977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300005995\|Ga0066790_10048764	Not Available	1833	Open in IMG/M
3300006174\|Ga0075014_100244360	Not Available	924	Open in IMG/M
3300006638\|Ga0075522_10017225	All Organisms → cellular organisms → Bacteria → Proteobacteria	4617	Open in IMG/M
3300009500\|Ga0116229_10013478	All Organisms → cellular organisms → Bacteria → Proteobacteria	11550	Open in IMG/M
3300009521\|Ga0116222_1002681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9219	Open in IMG/M
3300009521\|Ga0116222_1086442	Not Available	1352	Open in IMG/M
3300009524\|Ga0116225_1145479	Not Available	1083	Open in IMG/M
3300009637\|Ga0116118_1213690	Not Available	601	Open in IMG/M
3300009645\|Ga0116106_1069778	Not Available	1153	Open in IMG/M
3300009665\|Ga0116135_1125059	Not Available	946	Open in IMG/M
3300009709\|Ga0116227_10139560	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300010341\|Ga0074045_10615214	Not Available	692	Open in IMG/M
3300012904\|Ga0157282_10205751	Not Available	639	Open in IMG/M
3300014156\|Ga0181518_10261832	Not Available	874	Open in IMG/M
3300014164\|Ga0181532_10091506	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300014165\|Ga0181523_10055557	All Organisms → cellular organisms → Bacteria	2443	Open in IMG/M
3300014168\|Ga0181534_10016980	All Organisms → cellular organisms → Bacteria → Proteobacteria	3712	Open in IMG/M
3300014168\|Ga0181534_10033770	All Organisms → cellular organisms → Bacteria → Proteobacteria	2538	Open in IMG/M
3300014169\|Ga0181531_10113454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1625	Open in IMG/M
3300014489\|Ga0182018_10011031	All Organisms → cellular organisms → Bacteria → Proteobacteria	6454	Open in IMG/M
3300014495\|Ga0182015_10132096	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300014657\|Ga0181522_10229630	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300014838\|Ga0182030_10217586	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300016728\|Ga0181500_1356556	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300017823\|Ga0187818_10504981	Not Available	543	Open in IMG/M
3300017931\|Ga0187877_1125138	Not Available	1051	Open in IMG/M
3300017937\|Ga0187809_10175288	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300017955\|Ga0187817_10523977	Not Available	756	Open in IMG/M
3300017973\|Ga0187780_10097649	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300017975\|Ga0187782_10217456	Not Available	1432	Open in IMG/M
3300018006\|Ga0187804_10448435	Not Available	576	Open in IMG/M
3300018008\|Ga0187888_1102301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1219	Open in IMG/M
3300018022\|Ga0187864_10480961	Not Available	524	Open in IMG/M
3300018025\|Ga0187885_10291421	Not Available	740	Open in IMG/M
3300018026\|Ga0187857_10256136	Not Available	805	Open in IMG/M
3300018030\|Ga0187869_10109392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1391	Open in IMG/M
3300018043\|Ga0187887_10329369	Not Available	901	Open in IMG/M
3300018044\|Ga0187890_10019402	All Organisms → cellular organisms → Bacteria	4200	Open in IMG/M
3300018057\|Ga0187858_10168735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1447	Open in IMG/M
3300018085\|Ga0187772_10072049	All Organisms → cellular organisms → Bacteria → Proteobacteria	2174	Open in IMG/M
3300018088\|Ga0187771_11693076	Not Available	537	Open in IMG/M
3300018088\|Ga0187771_11922633	Not Available	502	Open in IMG/M
3300019268\|Ga0181514_1298157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1122	Open in IMG/M
3300021420\|Ga0210394_10035215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4462	Open in IMG/M
3300021474\|Ga0210390_10457013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. SCB32	1077	Open in IMG/M
3300023265\|Ga0247780_1127997	Not Available	675	Open in IMG/M
3300025454\|Ga0208039_1094331	Not Available	518	Open in IMG/M
3300025500\|Ga0208686_1038029	Not Available	1167	Open in IMG/M
3300025862\|Ga0209483_1027641	All Organisms → cellular organisms → Bacteria	2839	Open in IMG/M
3300026294\|Ga0209839_10033743	Not Available	1926	Open in IMG/M
3300027648\|Ga0209420_1102203	Not Available	814	Open in IMG/M
3300027667\|Ga0209009_1016798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1762	Open in IMG/M
3300027853\|Ga0209274_10358702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	751	Open in IMG/M
3300027854\|Ga0209517_10027396	All Organisms → cellular organisms → Bacteria → Acidobacteria	4923	Open in IMG/M
3300027855\|Ga0209693_10204895	Not Available	971	Open in IMG/M
3300027860\|Ga0209611_10016739	All Organisms → cellular organisms → Bacteria	9302	Open in IMG/M
3300027895\|Ga0209624_10039946	All Organisms → cellular organisms → Bacteria	2993	Open in IMG/M
3300027895\|Ga0209624_11129091	Not Available	504	Open in IMG/M
3300027908\|Ga0209006_10889945	Not Available	715	Open in IMG/M
3300028747\|Ga0302219_10026191	Not Available	2181	Open in IMG/M
3300028747\|Ga0302219_10048826	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300028800\|Ga0265338_10045888	All Organisms → cellular organisms → Bacteria	4012	Open in IMG/M
3300028801\|Ga0302226_10062272	Not Available	1736	Open in IMG/M
3300028801\|Ga0302226_10279518	Not Available	705	Open in IMG/M
3300028806\|Ga0302221_10504308	Not Available	528	Open in IMG/M
3300028808\|Ga0302228_10127938	Not Available	1178	Open in IMG/M
3300028879\|Ga0302229_10360115	Not Available	649	Open in IMG/M
3300029943\|Ga0311340_11611085	Not Available	504	Open in IMG/M
3300029945\|Ga0311330_10956158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium tumefaciens complex → Agrobacterium tumefaciens	636	Open in IMG/M
3300030043\|Ga0302306_10102439	Not Available	1109	Open in IMG/M
3300030490\|Ga0302184_10154084	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300030503\|Ga0311370_11053230	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300030617\|Ga0311356_10019358	All Organisms → cellular organisms → Bacteria → Proteobacteria	7408	Open in IMG/M
3300030659\|Ga0316363_10036454	All Organisms → cellular organisms → Bacteria	2460	Open in IMG/M
3300030687\|Ga0302309_10167016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. L27(2015)	1145	Open in IMG/M
3300030737\|Ga0302310_10077284	Not Available	2101	Open in IMG/M
3300030746\|Ga0302312_10266997	Not Available	647	Open in IMG/M
3300031027\|Ga0302308_10056634	All Organisms → cellular organisms → Bacteria	2808	Open in IMG/M
3300031028\|Ga0302180_10041495	Not Available	2823	Open in IMG/M
3300031234\|Ga0302325_10710039	Not Available	1445	Open in IMG/M
3300031234\|Ga0302325_12620261	Not Available	597	Open in IMG/M
3300031236\|Ga0302324_100087611	All Organisms → cellular organisms → Bacteria	5343	Open in IMG/M
3300031236\|Ga0302324_103026940	Not Available	558	Open in IMG/M
3300031708\|Ga0310686_107913436	Not Available	577	Open in IMG/M
3300031708\|Ga0310686_111721491	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300031708\|Ga0310686_115487448	All Organisms → cellular organisms → Bacteria → Proteobacteria	9117	Open in IMG/M
3300031708\|Ga0310686_115762335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. SCB32	1263	Open in IMG/M
3300032515\|Ga0348332_14547213	Not Available	906	Open in IMG/M
3300032805\|Ga0335078_10041612	All Organisms → cellular organisms → Bacteria → Proteobacteria	6813	Open in IMG/M
3300032896\|Ga0335075_10110517	All Organisms → cellular organisms → Bacteria	3561	Open in IMG/M
3300032955\|Ga0335076_10775959	Not Available	840	Open in IMG/M
3300032955\|Ga0335076_10816653	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300033828\|Ga0334850_000040	Not Available	66895	Open in IMG/M
3300033829\|Ga0334854_174655	Not Available	524	Open in IMG/M
3300033887\|Ga0334790_091806	Not Available	1003	Open in IMG/M
3300034124\|Ga0370483_0000060	All Organisms → cellular organisms → Bacteria → Proteobacteria	36959	Open in IMG/M
3300034163\|Ga0370515_0086692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1356	Open in IMG/M
3300034282\|Ga0370492_0034642	All Organisms → cellular organisms → Bacteria → Proteobacteria	2074	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.26%
Host-Associated	Host-Associated	3.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.36%
Aquatic	Environmental → Aquatic	29.91%
Plants	Host-Associated → Plants	3.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.12%
Freshwater	Environmental → Aquatic → Freshwater	28.97%
Peat	Environmental → Terrestrial → Peat	23.36%
Peat Moss	Host-Associated → Plants → Peat Moss	2.80%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.87%
Sediment	Environmental → Aquatic → Sediment	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	23.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.89%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	23.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.41%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.74%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	2.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	19.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.28%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.74%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.80%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.80%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	2.80%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.87%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_1000103810	3300000567	Peatlands Soil	MSTTVRRLLVLCALAPLGCVLTMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK*
JGI12270J11330_101153831	3300000567	Peatlands Soil	MSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACEFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPAIVTASTAPGFSFELVIPK*
JGI12269J14319_100005091	3300001356	Peatlands Soil	MSTTVRRLLVRCALAPLGCVLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACEFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPAIVTASTAPGFSFELVIPK*
Ga0062389_1015167192	3300004092	Bog Forest Soil	MSTTVCRLLILCALAPLGCLLAMSRPASADNLGPVYFDSATNELVVTMLYGGTNPNHKFKLKWGICQLDDSGRRPPLANADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELLIPK*
Ga0062389_1042824821	3300004092	Bog Forest Soil	MSNTGHRLLVLRGLAPLACVLVMSRPASANNFGPVHYDSATNELVVTILYGGTNSNHKFTLKWGPCQIDESGHRMPLVNADMLDDQFNDAEQQQYTLVKRFSLADMPCPRPAKVSVSTAPGFSFDLVIPE*
Ga0062388_1018470392	3300004635	Bog Forest Soil	MSNTGHRLLVLRGLAPLACVLVMSRPASANNFGPVHYDSATNELVVTILYGGTNSNHKFTLKWGPCQIDESGHRMPLVNADMLDDQFNDAEQQQYTLVKRFSLADMPCPRPAKVSVSTAPGF
Ga0070761_101398762	3300005591	Soil	MRCVLVHGVLAPLGCLVAMSGPASADNFGPNHYERATNELVVTMLYGGTNPNHKFTLKWGTCQFDESGRRMPLVNAAILDDQFNDTEQQQYSIITRFSLADMPCPRPATVTVSTAPGFSFELVIPK*
Ga0070761_102699771	3300005591	Soil	ERPRVTMSTTVRRLPVLWALALLGCVLTMPRPASGDNLGPVYYDSATNELVVTMLYGGTNANHKFKLKWGICQLDDSGRRPPLANADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELLIPK*
Ga0066790_100487642	3300005995	Soil	MSTTVRRLLVLCAFAPLGCLLATSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRLSLADMPCPRPANVTVSTAPGFSFELVIPK*
Ga0075014_1002443601	3300006174	Watersheds	MSTTVRRLLVLCALAPLGCVLAMSRPASADNFGPIYYDRATNELVVTMLYGGTNPNHKFTLNWGACQFDDSGRRMPLVNADILDDRFNDAEQQQYTIVTRFSLADMPCPRPANVTASTAPGFSFGLVIPK*
Ga0075522_100172254	3300006638	Arctic Peat Soil	MSTTVRRLLALCALAPLGCVLAMSRPASADNFGPGYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK*
Ga0116229_100134785	3300009500	Host-Associated	MSRIILRLLASGALAPLACALTMSRPASADNVGSSYYDRGTNELVVTMLYGGTNPNHKFTLKWGACEFDDSGSRKPLVNADILDDQFNDAEQQQYATVTRFSLADMPCPRPATVTVSTAPGFSFQLTIPK*
Ga0116108_11243871	3300009519	Peatland	DNFGPSSYDRATNELVVTMLYGGTNPNHKFTLKWGACQIDDSGHRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPAKVTVSTAPGFSLELVIPK*
Ga0116222_10026816	3300009521	Peatlands Soil	MSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK*
Ga0116222_10864421	3300009521	Peatlands Soil	MSTTVRRLLVRCALAPLGCVLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACEFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPAIVTASTAPGFSFELVIP
Ga0116225_11454792	3300009524	Peatlands Soil	MSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACEFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPAIV
Ga0116118_12136901	3300009637	Peatland	LCALAPLGCVLTMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0116106_10697781	3300009645	Peatland	MSTTVGRLLVLCALAPLGCVLAMSRPASADNFGPSSYDRATNELVVTMLYGGTNPNHKFTLKWGACQIDDSGHRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPAKVTVSTAPGFSLELVIPK*
Ga0116135_11250592	3300009665	Peatland	MKVTMSSAVRRHLVPCGLALLTCVLAISRRASADNFGPNHYEQATNELVVTILYGGTNSNHMFTLKWGPCQIDESGHRMPLVNAEILDDQFNDAEQQQYTLVKRFSLADMPCPRPAKLSVSTAPGFSFELVIPK*
Ga0116227_101395602	3300009709	Host-Associated	MLRKASGALAPLACALTMSRPASADNVGSSYYDRGTNELVVTMLYGGTNPNHKFTLKWGACEFDDSGSRKPLVNADILDDQFNDAEQQQYATVTRFSLADMPCPRPATVMVSTAPGFSFQLTIPK*
Ga0074045_106152141	3300010341	Bog Forest Soil	MSRPASADNLGLNHFDSATNELVVTILYGGTNSNHKFTLKWGPCQIDESGHRMPLVNADILDDQFNDVEQQQYTLVKRFSLADMPCPRPAKVSVSTAPGFSFELIIPK*
Ga0157282_102057512	3300012904	Soil	SRPASADNFGNHYYDRATNELVVTVLYGGTKPNHKFRLKWGACQFDDSGRRLPLVVADMLDDQFNDAEHQQYTTVTRFSLADMPCPRPAKVQVSTSPGYSFELVIPK*
Ga0181518_102618322	3300014156	Bog	RRLLVLCALAPLGCVLAMSRPARADNFGPSYYDRATNELIVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK*
Ga0181532_100915064	3300014164	Bog	MGCVLAMSRPASADNFGPRHYDPATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADVLDDQFNDTEQQQYTIVTRFSLADMPCPRPATVTVSTAPGFSFELIIPK*
Ga0181523_100555575	3300014165	Bog	MSRPASADNFGPRHYDPATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADVLDDQFNDTEQQQYTIVTRFSLADMPCPRPATVTVSTAPGFSFELIIPK*
Ga0181534_100169802	3300014168	Bog	MLRKASGALAPLACALTMSRPASADNVGSSYYDRGTNELVVTMLYGGTNPNHKFTLKWGACEFDDSGSDKPLVNADILDDQFNDAEQQQYATVTRFSLADMPCPRPATVMVSTAPGFSFQLTIPK*
Ga0181534_100337702	3300014168	Bog	MPATVCRLLAFRALALGCVLAASRPAGADNFGPSYYDAATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRLPFVNADVLDDQFNDTEQQQYTIVTRFSLGDMPCPRPANVAVSTAPGMSFELVIPK*
Ga0181531_101134542	3300014169	Bog	MPATICRLLAFRALALGCVLAASRPAGADNFGPSYYDAATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRLPLVNADVLDDQFNDTEQQQYTIVTRFSLGDMPCPRPANVAVSTAPGMSFELLIPK*
Ga0182018_100110315	3300014489	Palsa	MSTTVRRLLILCALAPLGSVLAMYRPASADNFGPSSYDRATNELVVTMLYGGTNANHKFTLKWGACQFDDSGRRIPWVNADILDDQFNDTEQRQYTIVTRFSLADMPCPRPATVTVSTAPGFSFELVIHR*
Ga0182015_101320961	3300014495	Palsa	MSTTVRRVLVLYALAPLGCVFAMSRLASADNFGPSYYDSVTNELVVTMLYGGTNPNHKLTLKWGACQFDDSGRRIPLVNADILDDQFNDTEQQQYTVVTRLSLADMPCPRPANVTVSTAPGFSFELVIPK*
Ga0181522_102296302	3300014657	Bog	MYTTVRRFLVLCALAPLSCTLAMSLPANADNFGPSYYDRATNELVVTVLYGGTNPNHKFTLKWGACQLDDSGRRMPLINADIVDNQFNDAEQQQYTSVARFSLADMPCPRPTTITLSTAPGFSFELVIPKQGN*
Ga0182030_102175862	3300014838	Bog	MLVPLACLAAAFGPVSADNFGPHYYDRATDQLVVTMLYGGTNPNHAFTLKWDACEFDDSGRRLPLVNGQVLDDQFNDVEKQQYKTVARFSIADMPCPRPAIVTLSTAPGFSFRLVIPK*
Ga0181500_13565562	3300016728	Peatland	MLRKASGALAPLACALTMSRPASADNVGSSYYDRGTNELVVTMLYGGTNPNHKFTLKWGACEFDDSGSRKPLVNADILDDQFNDAEQQQYATVTRFSLADMPCPRPATVMVSTAPGFSFQLTIPK
Ga0187818_105049811	3300017823	Freshwater Sediment	MSTTVRRLLVLCALAPLGCILAMSRPASADNIGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACEFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0187877_11251381	3300017931	Peatland	MSTTVRRLLVLCALAPLGCVLTMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0187809_101752881	3300017937	Freshwater Sediment	RASADNFGSSHYDRANNELVVTILYGGTNLNHGFTLKWGSCELDESGHRLPLVNGEILDDQFNDAEERQYRTVRRFSLADMPCPRPAIVTVSTAPGASFELVIPK
Ga0187817_105239771	3300017955	Freshwater Sediment	MSTTVRRLLVLCALAPLGCILAMSRPASADNFGPSYYERATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0187780_100976491	3300017973	Tropical Peatland	MSTTVRRLLVLCALAPLGCLLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNQNHEFTLRWGACQFDDSGRRMPLVNADILDDQFNDIERQQYTKVARFSLVDMPCPRPAKVTVSTAPGFSFELVIPSRQQR
Ga0187782_102174563	3300017975	Tropical Peatland	MRVTMSTTVRRLLILCALAPLGCVLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGVCEIDDSGRRMPLVNADILDDQFDDAEHQQYTIVARFSIADMPCPRPTTVMVSTAPGFSFELVIPE
Ga0187804_104484351	3300018006	Freshwater Sediment	VRRLLVLCALAPLGCVLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGGCQFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPANVTVSTTPGFSFELVIPK
Ga0187888_11023012	3300018008	Peatland	MSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0187864_104809611	3300018022	Peatland	MSTTVRRLLVLCALAPLGCVLTMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFILKWGACQFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0187885_102914212	3300018025	Peatland	ADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0187857_102561361	3300018026	Peatland	MSTTVGRLLVLCALAPLGCVLAMSRPASADNFGPSSYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVVPK
Ga0187869_101093921	3300018030	Peatland	MSRIILRLLASGALAPLACALTMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0187887_103293691	3300018043	Peatland	MSMTVRHLPVLCALAPLGCVLAMSRPASADNFGPSYYDRATNEFVVTMLYGGTNPKHKFTLQWGACQFDDSGRRMPLVNAEILDDQFNDTEQHQYTIVARFGLADMPCPRPATVAVSTAPGF
Ga0187890_100194027	3300018044	Peatland	MLRRRLLLCALAPMGCVLAMSRPASADNFGPRHYDPATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADVLDDQFNDTEQQQYTIVTRFSLADMPCPRPATVTVSTAPGFSFELIIPK
Ga0187858_101687352	3300018057	Peatland	MSTTVRRLLVLCALAPLGCVLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0187772_100720493	3300018085	Tropical Peatland	MSTRVRRLLALCAFTPLGCALPMSHPANADNFGPSYYDRASDELVVTILYGGTNPNHKFTLKWGACELDDSGRRMPLVNADVIDDQFNDAEKQQYQIVTRFSLADLPCPRPATV
Ga0187771_116930761	3300018088	Tropical Peatland	MSTTVRRLRLLCALAPLGCLVAMPRPASADNFGPSSYDRATNELVVTMLYGGTNPNHKFTLKWGVCQIDDSGRRMPLVNAEILDDQFNDAEQQQYTIVARFSLANMPCPRPATVTVSTAPGFSFELVIPE
Ga0187771_119226331	3300018088	Tropical Peatland	MYTTIRRLLVLCALAPLGCVLALPRPASADSFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPATV
Ga0181514_12981571	3300019268	Peatland	MPATVCRLLAFRALALGCVLAASRPAGADNFGPSYYDAATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRLPFVNADVLDDQFNDTEQQQYTIVTRFSLGDMPCPRPANVAVSTAPGMS
Ga0210394_100352154	3300021420	Soil	MSTTVRRLLVLCALAPLGSVLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGTCQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPINVTVSTAPGFSFELVIPK
Ga0210390_104570132	3300021474	Soil	MSITVRRLLIPCALVPLGCLLAIPRPVSADNFGPSHYDRATDQLVVTMQYGGTNPNHTFTIKWGTCEVDDSGQRMPLANADVLDDQFNDVEQQQYKIVVRLSLAGMPCPRPAIVTLSSPPGASIRLVIPK
Ga0247780_11279971	3300023265	Plant Litter	MFTTVRRLPLLCALLGCITAISRPASADNFGASYYDRATNELVVTVLYGGTNSNHRFRLKWGACEFDDSGRHLPLVVADMLDDQFNDAEHQQYTTVTRFSLADMPCPRPAKVQVSTSPGYSFELV
Ga0208039_10943311	3300025454	Peatland	VVCALAPLGCVLTMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIP
Ga0208686_10380292	3300025500	Peatland	MSTTVGRLLVLCALAPLGCVLAMSRPASADNFGPSSYDRATNELVVTMLYGGTNPNHKFTLKWGACQIDDSGHRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPAKVTVSTAPGFSLELVIPK
Ga0209483_10276411	3300025862	Arctic Peat Soil	MSTTVRRLLALCALAPLGCVLAMSRPASADNFGPGYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLLNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0209839_100337433	3300026294	Soil	MSTTVRRLLVLCAFAPLGCLLATSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0209420_11022031	3300027648	Forest Soil	STTVRRVLVLYALAPLGCVFAMSRLASADNFGPSYYDSVTNELVVTMLYGGTNANHKFKLKWGICQLDDSGRRPPLANADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0209009_10167983	3300027667	Forest Soil	MSRPASADNFGPSHYDGATNELVVTLLYGGTNPNHKFTLRWGACQFDDSGRRLPLVNADILDDQFNDTEQQQYTIVTRFTLADMPCPRPTNVTVSTAPGFSFELVIPK
Ga0209274_103587021	3300027853	Soil	ERPRVTMSTTVRRLPVLWALALLGCVLTMPRPASGDNLGPVYYDSATNELVVTMLYGGTNANHKFKLKWGICQLDDSGRRPPLANADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELLIPK
Ga0209517_100273963	3300027854	Peatlands Soil	MSTTVRRLLVRCALAPLGCVLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACEFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPAIVTASTAPGFSFELVIPK
Ga0209693_102048952	3300027855	Soil	MSGPAIADNFGPNHYERATNELVVTMLYGGTNPNHKFMLKWGTCQFDESGRRMPLVNAAILDDQFNDTEQQQYSIITRFSLADMPCPRPATVTVSTAPGFSFELVIPK
Ga0209611_100167394	3300027860	Host-Associated	MSRIILRLLASGALAPLACALTMSRPASADNVGSSYYDRGTNELVVTMLYGGTNPNHKFTLKWGACEFDDSGSRKPLVNADILDDQFNDAEQQQYATVTRFSLADMPCPRPATVTVSTAPGFSFQLTIPK
Ga0209624_100399461	3300027895	Forest Soil	MSTTVRRVLVLYALAPLGCVFAMSRLASADNFGPSYYDSVTNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRIPLVNADILDDQFNDTEQQQYTVVTRLSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0209624_111290911	3300027895	Forest Soil	LLKARPRLRVSVASTLRRVLAPRLLAPLGCLVAMSGAASADNFGPNHYERATNELVVTMLYGGTNPNHKFTLKWGTCQFDESGRRMPLVNAAILDDQFNDTEQQQYSIITRFSLADMPCPRPATVTVSTAPGFSFELVIPK
Ga0209006_108899451	3300027908	Forest Soil	MSTTVRRLLVLCAIAPLGCVLAMSRPASADNFGPSSYERATDELVVTILYGGTNPNHKFTLKWEACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPVIVTVSTAPGFSFELVIPK
Ga0302219_100261911	3300028747	Palsa	MSTTVRRLLILCALAPLGSVLAMYRPASADNFGPSSYDRATNELVVTMLYGGTNANHKFTLKWGACQFDDSGRRIPWVNADILDDQFNDTEQRQYTIVTRFSLADMPCPRPATVTVSTAPGFSFELVIHR
Ga0302219_100488261	3300028747	Palsa	MSTTAHRLLAICGLAPLACILAMPRPASADNFGPSHYDRATNELVVTILYGGTNSNHKFTLKWGPCQIDESGQRMPLVNAEILDDQFTDIEQQQYTLEKRFSLADMPCPRPAKVSLSTAPGFSVDLVIPK
Ga0265338_100458883	3300028800	Rhizosphere	MSTTVRRLLVLCALAPLGCLLAMSRLASADNFGPIYYDRATNELVVTMLYGGTNPNHKFTLKWGTCQFDDSGRRMPLVNADILDDQFNDAEQQQYAIVKRFSLTDMPCPRPANVAVSTAPGFSFELVIPT
Ga0302226_100622723	3300028801	Palsa	MSTPVHRLLVLCALAPLGCVLARSDPANADNFGPSYYDSAANELVVTMLYGGTNPNHKFKLKWGACQFDESGRRMPLANAEILDDEFNDTERQQYTIVKRFSMADMPCPRPANVSVSTAPGFSFDLVIPK
Ga0302226_102795181	3300028801	Palsa	MPRPASADNFGPSHYDRATNELVVTILYGGTNSNHKFTLKWGPCQIDESGQRMPLVNAEILDDQFTDIEQQQYTLEKRFSLADMPCPRPAKVSLSTAPGFSVDLVIPK
Ga0302221_105043081	3300028806	Palsa	MPRPASADNFGPSHYDRATNELVVTILYGGTNSNHKFTLKWGPCQIDESGQRMPLVNAEILDDQFTDIEQQQYTLEKRFSLADMPCPRPA
Ga0302228_101279381	3300028808	Palsa	MMSTPVHRLLVLCALAPLGCVLARSDPANADNFGPSYYDSAANELVVTMLYGGTNPNHKFKLKWGACQFDESGRRMPLANAEILDDEFNDTERQQYTIVKRFSMADMPCPRPANVSVSTAPGFSF
Ga0302229_103601152	3300028879	Palsa	SGQRPELRVMMSTPVHRLLVLCALAPLGCVLARSDPANADNFGPSYYDSAANELVVTMLYGGTNPNHKFKLKWGACQFDESGRRMPLANAEILDDEFNDTERQQYTIVKRFSMADMPCPRPANVSVSTAPGFSFDLVIPK
Ga0311340_116110851	3300029943	Palsa	LVTMSTTVGRLLLLRALAALGCVLAVSRPASADNFGPSHYDRATNEFVVTMLYGGTTPKHNFTLKWGACQFDDSGRRMPLVNAEILDDQFNDTEQQQYTTVTRFSLADMPCPRPAIVTLSTAPGFSFELVIPK
Ga0311330_109561582	3300029945	Bog	DGLRLVLRVTMSRIILRLLALGALAPLGCVLTMSRPASADNFGPSHYERATNELVVTMLYGGTNPNHKFTLKWGACEFDDSGSRKPLVNADILDDQFNDAEQQQYATVKRFSLADMPCPRPATVTVSTAPGFSFQLTIPK
Ga0302306_101024392	3300030043	Palsa	MMSTPVHRLLVLCALAPLGCVLARSDPANADNFGPSYYDSAANELVVTMLYGGTNPNHKFKLKWGACQFDESGRRMPLANAEILDDEFNDTERQQYTIVKRFSMADMPCPRPANVSVSTAPGFSFDLVIPK
Ga0302184_101540842	3300030490	Palsa	ILAMPRPASADNFGPSHYDRATNELVVTILYGGTNSNHKFTLKWGPCQIDESGQRMPLVNAEILDDQFTDIEQQQYTLEKRFSLADMPCPRPAKVSLSTAPGFSVDLVIPK
Ga0311370_110532302	3300030503	Palsa	MSTTVGRLLLLRALAALGCVLAVSRPASADNFGPSHYDRATNEFVVTMLYGGTTPKHNFTLKWGACQFDDSGRRMPLVNAEILDDQFNDTEQQQYTTVTRFSLADMPCPRPAIVTLSTAPGFSFELVIPK
Ga0311356_100193587	3300030617	Palsa	LAPLACILAMPRPASADNFGPSHYDRATNELVVTILYGGTNSNHKFTLKWGPCQIDESGQRMPLVNAEILDDQFTDIEQQQYTLEKRFSLADMPCPRPAKVSLSTAPGFSVDLVIPK
Ga0316363_100364543	3300030659	Peatlands Soil	MSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACEFDDSGRRMPLVNADILDDQFNDAEQQQYTIVTRFSLADMPCPRPAIVTASTAPGFSFELVIPK
Ga0302309_101670163	3300030687	Palsa	VMMSAPVHRLLVLCALAPLGCVLARSDPANADNFGPSYYDSAANELVVTMLYGGTNPNHKFKLKWGACQFDESGRRMPLANAEILDDEFNDTERQQYTIVKRFSMADMPCPRPANVSVSTAPGFSFDLVIPK
Ga0302310_100772843	3300030737	Palsa	MSTTVRRLLILCALAPLGSVLAMYRPASADNFGPSSYDRATNELVVTMLYGGTNANHKFTLKWGACQFDDSGRRIPWVNADILDDQFNDTEQRQYTIVTRFSLADMPCPRPATVTVSTAP
Ga0302312_102669971	3300030746	Palsa	MSTTVRRLLILCALAPLGSVLAMYRPASADNFGPSSYDRATNELVVTMLYGGTNANHKFTLKWGACQFDDSGRRIPWVNADILDDQFNDTEQRQYTIVTRFSLADMPCPRPATVTVSTAPGFSFEL
Ga0302308_100566341	3300031027	Palsa	MSTPVHRLLVLCALAPLGCVLARSDPANADNFGPSYYDSAANELVVTMLYGGTNPNHKFKLKWGACQFDESGRRMPLANAEILDDEFNDTERQQYTIVKRFSMADMPCPRPANVSVSTAPGFSFDL
Ga0302180_100414953	3300031028	Palsa	MSMTVRRLLILCALAPLGSVLAMYRPASADNFGPSSYDRATNELVVTMLYGGTNANHKFTLKWGACQFDDSGRRIPWVNADILDDQFNDTEQRQYTIVTRFSLADMPCPRPATVTVSTAPGFSFELVIHR
Ga0302325_107100391	3300031234	Palsa	MTVRCLLVLCALSPLSCILATSRPANADNFGPSYYDHVTNELVVTMLYGGTNPNHKFTLKWGVCQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVARFGLADLPCPRPATVTLSAAPGFSFELVIPK
Ga0302325_126202611	3300031234	Palsa	MSTTLLRVLAPRVLAPLGCVVAMSGPASADNFGPNHYERATNELVVTMLYGGTNPNHKFTLKWGTCQFDESGRRMPLVNAAILDDQFNDTEQQQYSIVTRFSLSDMPCPRPATVTVSTAPGFSFELVIPK
Ga0302324_1000876113	3300031236	Palsa	MSTTVGRLLVTRALAPLGCVLAMSRLASADNFGPSHYDRATDEFVVTMLYGGTNPKHKFTLKWGACQSDDSGRRMPLVNAEILDDQFNDNEQQQYTIVTRFSLADLPCPRPAIVTLSTAPGFSFELVIPK
Ga0302324_1030269402	3300031236	Palsa	ARPGLRVTMSTTLLRVLAPRVLAPLGCVVAMSGPASADNFGPNHYERATNELVVTMLYGGTNPNHKFTLKWGTCQFDESGRRMPLVNAAILDDQFNDTEQQQYSIVTRFSLSDMPCPRPATVTVSTAPGFSFELVIPK
Ga0310686_1079134361	3300031708	Soil	MSTTARRFLFALCALAPLFSVVETASADNFGPSYYDRATNEIVVTVLYGGTNPNHKFTLKWGACEFDDSGHRMPLANADMLDDQFNDAEQQQYKIVTRLSLADMPCPRPDILTVSTAPGFSFTLVIPK
Ga0310686_1117214913	3300031708	Soil	MHTPVHRLLVFCALALLGCVLTGSDPADADNFGPSHYDSAANELVVTMLYGGTNPNHNFKLKWGACQFDESGRRMPLANAEILDDEFNDTEQQQYTIVKRFSVADMPCPRPANVSVSTAPGFSFDLVIPK
Ga0310686_11548744812	3300031708	Soil	MSRPARGDNFGFNYYDRATNELVVTMLYGGTNANHKFTLKWGVCQFDDSGRRMPLVNADIRDDQFNDAERQQYSIVRRFSLADMPCPRPTTVTVSIAPEFSFELVIPK
Ga0310686_1157623352	3300031708	Soil	MLTTVRRLLIPSTLVPLACLLAMPRPASADNFGPSHYDRATDQIVVTMLYGGSNPNHTFTIKWGTCEVDDSGRRMPLVNADVLDDQFNDVEQQQYKIVVRLSLAGMPCPRPAIVMLSSPPGSSIRLVIPK
Ga0348332_145472132	3300032515	Plant Litter	MQVVMSVTIRRHLVLCALALMGFVLVRSRPASADTFGPSHYDSATSELVVTVLYGGTNPNHRFTLKWGACEFDDSGRRMPLANADMLDDQFDDAERQQYKVVARFSLANMPCPRPAIVTVSTAPGFSFELVIPK
Ga0335078_100416126	3300032805	Soil	MRNTIFRPVQVCALALLGGAGAIHSTATASNFGSSYYDRATDELVVTILYGGTNPHHQFTIKWGTCELDESGHRQPLVNAEILDDQFNDTEQQQYKVVSRFSLKDMPCPRPAIVAVSIAPNASFEVVIPK
Ga0335075_101105174	3300032896	Soil	MLATVRRVLISSALAPLACLFAMPRPAAADSFGAFHYDRATDQLVVTMLYGGTNPNHTFTLKWGACEVDDSGHRLPLANADVLDDQFNDVEQQQYEIVVRLSLADMPCPRPAIVTLSSPPGSSIRLVIPK
Ga0335076_107759592	3300032955	Soil	MSTTVRRLLVLGVLASLSGVPRSVSADNFGPSHYDPATNELVVTILYGGTNRNHKFTLKWGACQFDDSGRRMPLVNADVLDDQFNDVEQQQYTIVTRFSLADMPCPRPAKVTVTIAPGFGFELVIPK
Ga0335076_108166532	3300032955	Soil	PASADNFGPSHYDPATNELVVTILFGGTNPNHKFTLKWGACQFDDSGRRLPLVNADILDDQFNDTEQRQYTIVKRFSLADMPCPRPATVTVSTAPGFSFELVIPK
Ga0334850_000040_18819_19175	3300033828	Soil	VLAPLGCVVAMSGPASADNFGPSHYDGATNELVVAMLYGGTNPNHKFTLKWGACQLDESGRRMPLVNAAILDDQFNDTEQQQYSIVTRFSLADMPCPRPATVAVSTAPGFSFELVIPR
Ga0334854_174655_5_361	3300033829	Soil	VLAPLGCVVAMSGPASADNFGPNHYERATNELVVTMLYGGTNPNHKFTLKWGTCQFDESGRRMPLVNAAILDDQFNDTEQQQYSIVTRFSLSDMPCPRPATVTVSTAPGFSFELVIPK
Ga0334790_091806_400_792	3300033887	Soil	MSTTVRRLLVLCALAPLGCVLAMSRPASAENFGPSYYDRATNELVVTMLYGGTNPNHKFALKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADMPCPRPANVTVSTAPGFSFELVIPK
Ga0370483_0000060_30341_30733	3300034124	Untreated Peat Soil	MSTTVRRLLVLCALAPLGCVLAMSRPASADNFGPSYYDRATNELVVTMLYGGTNPNHKFTLKWGACQFDDSGRRMPLVNADILDDQFNDTEQQQYTIVTRFSLADTPCPRPANVTVSTAPGFSFELVIPK
Ga0370515_0086692_988_1314	3300034163	Untreated Peat Soil	MYRPASADNFGPSSYDRATNELVVTMLYGGTNANHKFTLKWGACQFDDSGRRIPWVNADILDDQFNDTEQRQYTIVTRFSLADMPCPRPATVTVSTAPGFSFELVIPR
Ga0370492_0034642_788_1180	3300034282	Untreated Peat Soil	MSRIILRLLALGALAPLGCVLTMSRPASADNFGPSHYERATNELVVTMLYGGTNPNHKFTLKWGACEFDDSGSRKPLVNADILDDQFNDAEQQQYATVKRFSLADMPCPRPATVTVSTAPGFSFQLTIPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092539

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences