Metagenome Family F092563

Basic Information
Family ID	F092563
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	66 residues
Representative Sequence	LMPIDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEANECLLDEWGNPRPKKAQTEE
Number of Associated Samples	76
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	19.81 %
% of genes near scaffold ends (potentially truncated)	55.14 %
% of genes from short scaffolds (< 2000 bps)	92.52 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Most Common Taxonomy
Group	Unclassified (70.093 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.822 % of family members)
Environment Ontology (ENVO)	Unclassified (33.645 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.598 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.04% β-sheet: 0.00% Coil/Unstructured: 48.96%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07077	DUF1345	1.87
PF05099	TerB	1.87
PF03734	YkuD	1.87
PF08240	ADH_N	0.93
PF01381	HTH_3	0.93
PF04324	Fer2_BFD	0.93
PF03807	F420_oxidored	0.93
PF04519	Bactofilin	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.87
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.87
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	1.87
COG4291	Uncharacterized membrane protein	Function unknown [S]	1.87
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
All Organisms	root	All Organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
cellular organisms	root	All Organisms → cellular organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	8.41 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	8.41 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1.87 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	8.41 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1.87 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17283767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1228	Open in IMG/M
2088090015\|GPICI_8829101	All Organisms → cellular organisms → Bacteria	8009	Open in IMG/M
2088090015\|GPICI_9054421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3045	Open in IMG/M
2088090015\|GPICI_9135010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11284	Open in IMG/M
3300000881\|JGI10215J12807_1437904	Not Available	635	Open in IMG/M
3300000890\|JGI11643J12802_10646402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1018	Open in IMG/M
3300000953\|JGI11615J12901_11621871	Not Available	614	Open in IMG/M
3300000955\|JGI1027J12803_108421102	Not Available	866	Open in IMG/M
3300002099\|JGI24808J26613_1028533	Not Available	818	Open in IMG/M
3300002459\|JGI24751J29686_10059797	Not Available	785	Open in IMG/M
3300004114\|Ga0062593_101223579	Not Available	790	Open in IMG/M
3300004114\|Ga0062593_102619524	Not Available	573	Open in IMG/M
3300004156\|Ga0062589_100501518	Not Available	1023	Open in IMG/M
3300004156\|Ga0062589_100603099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	953	Open in IMG/M
3300004156\|Ga0062589_102235805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	561	Open in IMG/M
3300004463\|Ga0063356_101480369	Not Available	1004	Open in IMG/M
3300004463\|Ga0063356_104171508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300004479\|Ga0062595_100632840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	842	Open in IMG/M
3300004479\|Ga0062595_101547133	Not Available	615	Open in IMG/M
3300004480\|Ga0062592_101214010	Not Available	706	Open in IMG/M
3300004643\|Ga0062591_101335287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	707	Open in IMG/M
3300005294\|Ga0065705_10513866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300005332\|Ga0066388_100598772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1725	Open in IMG/M
3300005332\|Ga0066388_100842613	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300005332\|Ga0066388_100920266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1450	Open in IMG/M
3300005332\|Ga0066388_100944108	Not Available	1434	Open in IMG/M
3300005332\|Ga0066388_101038845	All Organisms → cellular organisms → Bacteria → Proteobacteria	1378	Open in IMG/M
3300005332\|Ga0066388_101573783	Not Available	1155	Open in IMG/M
3300005332\|Ga0066388_102757552	Not Available	897	Open in IMG/M
3300005332\|Ga0066388_105246842	Not Available	657	Open in IMG/M
3300005340\|Ga0070689_101256334	Not Available	666	Open in IMG/M
3300005353\|Ga0070669_100398040	Not Available	1126	Open in IMG/M
3300005354\|Ga0070675_100754373	Not Available	888	Open in IMG/M
3300005434\|Ga0070709_11046913	Not Available	651	Open in IMG/M
3300005434\|Ga0070709_11182387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300005435\|Ga0070714_101357103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	694	Open in IMG/M
3300005435\|Ga0070714_102270684	Not Available	528	Open in IMG/M
3300005437\|Ga0070710_10706991	Not Available	712	Open in IMG/M
3300005437\|Ga0070710_11327384	Not Available	536	Open in IMG/M
3300005440\|Ga0070705_100832181	Not Available	737	Open in IMG/M
3300005440\|Ga0070705_101365413	Not Available	589	Open in IMG/M
3300005455\|Ga0070663_100425744	Not Available	1090	Open in IMG/M
3300005536\|Ga0070697_101627192	Not Available	577	Open in IMG/M
3300005536\|Ga0070697_101740197	Not Available	558	Open in IMG/M
3300005545\|Ga0070695_101450089	Not Available	570	Open in IMG/M
3300005549\|Ga0070704_101694656	Not Available	584	Open in IMG/M
3300005618\|Ga0068864_100998712	Not Available	830	Open in IMG/M
3300005764\|Ga0066903_101768113	Not Available	1180	Open in IMG/M
3300005764\|Ga0066903_101854826	Not Available	1153	Open in IMG/M
3300005764\|Ga0066903_103130170	Not Available	895	Open in IMG/M
3300005764\|Ga0066903_108887566	Not Available	509	Open in IMG/M
3300006173\|Ga0070716_101300738	Not Available	588	Open in IMG/M
3300006845\|Ga0075421_100851422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300006845\|Ga0075421_100899024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1011	Open in IMG/M
3300006853\|Ga0075420_101635576	Not Available	552	Open in IMG/M
3300006854\|Ga0075425_100760291	Not Available	1111	Open in IMG/M
3300006854\|Ga0075425_101927938	Not Available	661	Open in IMG/M
3300006871\|Ga0075434_100782626	Not Available	970	Open in IMG/M
3300006880\|Ga0075429_100643993	Not Available	928	Open in IMG/M
3300006903\|Ga0075426_10436905	Not Available	968	Open in IMG/M
3300006904\|Ga0075424_100590006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1187	Open in IMG/M
3300006904\|Ga0075424_100953339	Not Available	915	Open in IMG/M
3300006969\|Ga0075419_10769257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	687	Open in IMG/M
3300007076\|Ga0075435_100282759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1416	Open in IMG/M
3300009100\|Ga0075418_12088932	Not Available	617	Open in IMG/M
3300009101\|Ga0105247_10910905	Not Available	680	Open in IMG/M
3300009101\|Ga0105247_11274338	Not Available	589	Open in IMG/M
3300009156\|Ga0111538_11407343	Not Available	880	Open in IMG/M
3300009156\|Ga0111538_11496288	Not Available	851	Open in IMG/M
3300009162\|Ga0075423_10337284	Not Available	1580	Open in IMG/M
3300010043\|Ga0126380_11645806	Not Available	575	Open in IMG/M
3300010047\|Ga0126382_10740306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	830	Open in IMG/M
3300010358\|Ga0126370_11957657	Not Available	572	Open in IMG/M
3300010359\|Ga0126376_10669268	Not Available	994	Open in IMG/M
3300010366\|Ga0126379_11834101	Not Available	710	Open in IMG/M
3300010373\|Ga0134128_11492230	Not Available	744	Open in IMG/M
3300010396\|Ga0134126_13085957	Not Available	502	Open in IMG/M
3300010397\|Ga0134124_12803669	Not Available	531	Open in IMG/M
3300012882\|Ga0157304_1061470	Not Available	604	Open in IMG/M
3300012882\|Ga0157304_1105322	Not Available	520	Open in IMG/M
3300012900\|Ga0157292_10142860	Not Available	755	Open in IMG/M
3300012910\|Ga0157308_10229108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300012912\|Ga0157306_10036941	Not Available	1154	Open in IMG/M
3300014497\|Ga0182008_10868412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300015371\|Ga0132258_10379242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3506	Open in IMG/M
3300015373\|Ga0132257_101053221	Not Available	1025	Open in IMG/M
3300016404\|Ga0182037_11144987	Not Available	682	Open in IMG/M
3300016404\|Ga0182037_11673138	Not Available	567	Open in IMG/M
3300016422\|Ga0182039_10187209	Not Available	1640	Open in IMG/M
3300025920\|Ga0207649_11262714	Not Available	584	Open in IMG/M
3300026118\|Ga0207675_101909484	Not Available	612	Open in IMG/M
3300027909\|Ga0209382_10764773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1032	Open in IMG/M
3300027909\|Ga0209382_12213811	Not Available	519	Open in IMG/M
3300028889\|Ga0247827_11060741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300031545\|Ga0318541_10708900	Not Available	562	Open in IMG/M
3300031546\|Ga0318538_10602658	Not Available	596	Open in IMG/M
3300031679\|Ga0318561_10144200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1276	Open in IMG/M
3300031719\|Ga0306917_10223014	Not Available	1436	Open in IMG/M
3300031797\|Ga0318550_10551370	Not Available	555	Open in IMG/M
3300031858\|Ga0310892_11347637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	512	Open in IMG/M
3300031910\|Ga0306923_10044744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4854	Open in IMG/M
3300031910\|Ga0306923_10254081	Not Available	2011	Open in IMG/M
3300031981\|Ga0318531_10564536	Not Available	516	Open in IMG/M
3300032001\|Ga0306922_10433369	Not Available	1406	Open in IMG/M
3300032076\|Ga0306924_10252052	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300033289\|Ga0310914_11041631	Not Available	719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.16%
Host-Associated	Host-Associated	30.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.16%
Plants	Host-Associated → Plants	30.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.54%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.86%
Loam	Environmental → Terrestrial → Soil → Loam	24.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00680850	2088090014	Soil	ETTLMPVDPSECRQHALDCVRMAQTVNNPEARKVWSDLARTWLMFATDLEANKGLLDEWGRPKPKKRQTES
GPICI_02805430	2088090015	Soil	MPVDPSECRQHALDCVRMAQTAKDPEARKIWSDLARTWLRFASDLEANEGLLDEWGKLKPKKRLTE
GPICI_01088130	2088090015	Soil	MPVDPSECAGLCGDGANGNNPEARKXWSDLARTWLMFATDLEANEGLLDEWGRPKPKGTQTG
GPICI_01683300	2088090015	Soil	MPVDPSECRQHALDCVRMAQTVNNPEARKVWSDLARTWLMFATDLEANKGLLDEWGRPKPKKRQTES
JGI10215J12807_14379041	3300000881	Soil	MPVDPSECRQHALDCVRMAQTANDPKARKVWSDLARTWLRFATDLEANECLLDEWGRPKSKKHQTEP*
JGI11643J12802_106464021	3300000890	Soil	MPVDPSECRQHALDCVRMAQTVNNPEARKVWSDLARTWLMFATDLEANKGLLDEWGRPKPKKRQTES*
JGI11615J12901_116218711	3300000953	Soil	RGGETFMPVDPGECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFATDLEANESLLDEWGRPKTKSSEPEE*
JGI1027J12803_1084211022	3300000955	Soil	MHIDPGDCRQHALDCVRFAQTANSPEARKIWSDLARTLLRFASDVEANECLLEGWDRPKPKKHQNE*
JGI24808J26613_10285331	3300002099	Soil	MPVEPGECRQNALDCVRMAQTATTPEARKIWSDLAKTWLRFATDLEASEGLLVEWGRPKPKRAETEE*
JGI24751J29686_100597972	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	GRGFFQGGENTLMPVDPGECRQHALDCVRMAQTATSPEARKIWSDLARTWLRFATDLEASQCLLDEWGRPKAKKHQSES*
Ga0062593_1012235791	3300004114	Soil	TTLMPVDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEANEGLQDE*
Ga0062593_1026195241	3300004114	Soil	MSVVVIVPSGATSLMPVDASECRQHALDCVRLAQTATTPEARKIWSDLAKTWLRFASDLEANECLLDEWGRPK
Ga0062589_1005015182	3300004156	Soil	MPIDPSECRQHALDCVRLAQTAKDPEARKIWSDLARTWLRFASDLEVSQCLLDEWGKPKPKKHETESKAG*
Ga0062589_1006030991	3300004156	Soil	MPVDPSECRQHALDCVRMAQTATTPEAKKIWSDLAKTWLRFATDLEENESLLDEWGRPEPRKTQTE*
Ga0062589_1022358051	3300004156	Soil	MPIHPNDCRQRALHCGRMAQTANDPQARKTWSDLAKTWLRFASDFEASECLLDEWGRPKPKKHRSEAI*
Ga0063356_1014803694	3300004463	Arabidopsis Thaliana Rhizosphere	MPVDPSECAGLCGDGANGNNPEARKIWSDLARTWLMFATDLEANEGLLDEWGRPKPKGTQTG*
Ga0063356_1041715082	3300004463	Arabidopsis Thaliana Rhizosphere	MPVDPSECRQHALDCVRMAQTAKDPEARKIWSDLARTWLRFASDLEANEGLLDEWGKLKPKKRLTE*
Ga0062595_1006328402	3300004479	Soil	MPIDPSECRQHALDCVRLAQTAKDPEARKIWSDLARTWLRFASDLEVSQCLLDEWGKPKPKKHETES*
Ga0062595_1015471331	3300004479	Soil	LDCVRMAQTANDPQARKLWSDLARTWLRFATDLETNEGLLDEWGKPKSKKHQTES*
Ga0062592_1012140102	3300004480	Soil	MPVDPSECRQHALDCVRMAQTANNPEARKVWSDLARTWLMFATDLEANEGLLDEWGRPKSQKHQNES*
Ga0062591_1013352871	3300004643	Soil	MPIDPSDCRQHALDCVRMAQTATSPEARKIWSDLARTWLRFATDLEANEGLLDEWGKPKPKKHQSES*
Ga0065705_105138662	3300005294	Switchgrass Rhizosphere	MPIDPSECRQHALDCVRMAQTANNPEARKVWSDLARTWLMFATDLEANEGLLDEWGRPKSQKHQTES*
Ga0066388_1005987724	3300005332	Tropical Forest Soil	MPIDPSECRQHALDCVRMAQTATTPEARKTWSDLAKTWLRFASDLGANECLLDEWGRPKSKKTQAEE*
Ga0066388_1008426133	3300005332	Tropical Forest Soil	MSIDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEAKECLLDEWGKPKKGRSNAYKNRSGL*
Ga0066388_1009202661	3300005332	Tropical Forest Soil	MSNDPSECSQRALDCVRMAQTATTPEARKTWSDLAKTWLRFASDLENEGLLAEWTKKTQTEE*
Ga0066388_1009441082	3300005332	Tropical Forest Soil	MPTDPSECRQHALDCVRLAQTSTTPEARKTWSDLAKTWLRFASDIEANECLLDEWGKPGQRRQTEE*
Ga0066388_1010388452	3300005332	Tropical Forest Soil	VIDPSECRQHALDCVRLAQTSTTPEARKTWSDLAKTWLRLASDLEANECLLDEWGKPSPKKTQTGE*
Ga0066388_1015737831	3300005332	Tropical Forest Soil	MPVDPRECRQHALECVRLAQTARTIWSDLAQTWLRFASDLEANENLLDEWGKPKASCQPEE*
Ga0066388_1027575521	3300005332	Tropical Forest Soil	MPVNPSECRQHALDCVRMAQTANDPQAREVWSDLAKTWLRFATDLDANEGLLDEWGRPKPKGTQTG*
Ga0066388_1052468421	3300005332	Tropical Forest Soil	VIDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEAKEGLLDEWGKPKPKKTEE*
Ga0070689_1012563341	3300005340	Switchgrass Rhizosphere	HKRGKTQTTFMPIDPSECRQHALDCVRLAQTAKNPEARKIWSDLARTWLRFASDLEASQCLLDEWGRPKPKKHQTES*
Ga0070669_1003980401	3300005353	Switchgrass Rhizosphere	LVDPGDCRQHALDCARLAQTSTTPEEKETWSDLAKTWLRFASDLEANEGLFDEWGRPKPKRTHTGE*
Ga0070675_1007543732	3300005354	Miscanthus Rhizosphere	TVMPIHPNDCRQRALHCGRMAQTVNDPQARKTWSDLAKTWLRFASDFEASECLLDEWGRPKPKKHRSEAI*
Ga0070709_110469131	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LTPVHPGECRDHALHCVRMSQTSNSSEAREIWSDLAKTWLRFASDLEANEGLLDQWGKPKPRGTQTV*
Ga0070709_111823871	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ECRQHALDCVRLAQTATTPEARKIWSDLAKTWLRFASDREANERLLDEWGRPKTKSSQPEE*
Ga0070714_1013571032	3300005435	Agricultural Soil	AFPSFECRDHALHCVRMSQTSNSPEAREIWSDLAKTWLRFASDLEANEGLLDQWGKPKPRGTQTV*
Ga0070714_1022706841	3300005435	Agricultural Soil	MPVDPSECRQHALDCVRLAQTATSLEARKIWSDLARTWLRFASDLEANESLLD
Ga0070710_107069911	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLIDPGECLQHALDCVRLAQTATTPEARKIWSDLARTSLRFASDLEANESLLDEWGRPKPKGTQTGE*
Ga0070710_113273841	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	PSFECRDHALHCVRMSQTSNSPEAREIWSDLAKTWLRFASDLEANEGLLDHWGKPKPRGTQTV*
Ga0070705_1008321811	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPIDPSECRQHALDCVRLAQTAKNPEARKIWSDLARTWLRFASDLEASQCLLDEWGKPKPNKHQTES*
Ga0070705_1013654131	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ENTLMPVDPGECRQHALDCVRMAQTATSPEARKIWSDLARTWLRFATDLEASQCLLDEWGRPKAKKHQSES*
Ga0070663_1004257443	3300005455	Corn Rhizosphere	ALVDPGDCRQHALDCVRLAQTSTTPEEKETWSDLAKTWLRFASDLEANEGLFDEWGRPKPKRTHTGE*
Ga0070697_1016271921	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPVDPSECRQHALDCVRMAQTATSPEARKIWSDLARTWLRFATDLEASQCLLDEWGRPKAKKHQSES*
Ga0070697_1017401972	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTIDPGECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEANEGLLDEWGKPTKKAQNEE*
Ga0070695_1014500891	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTIDPGECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEANEGLQDE*
Ga0070704_1016946561	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPFDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEANEGLQDE*
Ga0068864_1009987122	3300005618	Switchgrass Rhizosphere	MTIDPSECRQHALDCVRLAQTATTPEARKIWSDLAKTWLRFASDLEANEGLLDEWGKPTKKAQNEE*
Ga0066903_1017681132	3300005764	Tropical Forest Soil	MSIDPRECRQHALDCVRMAQTATTPEARKTWSDLAKTWLRFASDLEANEGLLDEWGRPKPKKTQTGA*
Ga0066903_1018548265	3300005764	Tropical Forest Soil	PSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEANECLLDEWGEPRPKKAQTEECRSNPQNRSGL*
Ga0066903_1031301703	3300005764	Tropical Forest Soil	MNPSECRQHALDCVRMAQTATTPEARKTWSDLAKTWLRFASDLEANECLSDEWGKPRPKSNQS
Ga0066903_1088875662	3300005764	Tropical Forest Soil	MPIDPGECRQHALDCVRLAQTATTPEARELWSDLAKTWLTFASDLEANEGLLDQWG
Ga0070716_1013007381	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPVDPSECRQHALDCVRLAQTATSLEARKIWSDLARTWLRFASDLEANESLLDEWGRPKPKGTQTGE*
Ga0068871_1024118361	3300006358	Miscanthus Rhizosphere	QRALECVRLAQTTNDPEVRKTWSDLAKTWLISATDFEANECLLDDWGRPKPRGKRTPD*
Ga0075421_1008514221	3300006845	Populus Rhizosphere	TLMPVDPGECRQHALDCVRMAQTATSPEARKIWSDLARTWLRFASDLEANECLLDEWGKPKPKKASE*
Ga0075421_1008990241	3300006845	Populus Rhizosphere	MPVDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFATDLEASESLLDEWGRPKTKSSEPEE*
Ga0075420_1016355761	3300006853	Populus Rhizosphere	MPVDPSECRQHALDCVRMAQTATTPEARKTWSDLAKTWLRFATDIEANEGLLDEWEKPTKKAQNEE*
Ga0075425_1007602911	3300006854	Populus Rhizosphere	MPVDPSECRQHALDCVRMAQPATTPEARKTWSDLAKTWLRFATDIEANEGLLDEWGKPTKKAQNEE*
Ga0075425_1019279382	3300006854	Populus Rhizosphere	MPVDPSGCRQHALDCVRMAQTATSPEARKIWSDLARTWLRFATDLEANEGLLDEWGKPKPKKHQSES*
Ga0075434_1007826263	3300006871	Populus Rhizosphere	DPSECRQHALDCVRMAQTATTPEARKTWSDLAKTWLRFATDIAANEGLLDEWEKPTKKAQNEE*
Ga0075429_1006439931	3300006880	Populus Rhizosphere	HALDCVRMAQTATTSEARKTWSDLAKTWLRFASDLEANEGLLDEWGKPTKKAQNEE*
Ga0075426_104369052	3300006903	Populus Rhizosphere	MRIDPGDCRQHALDCVRLAQTSTTPEARETWSDLAKTWLRFASDLEANECLFD
Ga0075424_1005900061	3300006904	Populus Rhizosphere	MLVDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFATEANESLLDEWGRPKTKSSEPEK*
Ga0075424_1009533391	3300006904	Populus Rhizosphere	MRIDPGDCRQHALDCVRLAQTSTTPEARETWSDLAKTWLRFASDLEANECLFDEWGRP
Ga0075419_107692571	3300006969	Populus Rhizosphere	PPVRGFFRGGETFMPVDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFATDLEASESLLDEWDRPKTKSSEPEE*
Ga0075435_1002827591	3300007076	Populus Rhizosphere	HALDCVRMAQTATTPEARKTWSDLAKTWLRFATDIEANEGLLDEWEKPTKKAQNEE*
Ga0075418_120889321	3300009100	Populus Rhizosphere	AKHALDCVRMAQTATTPEARKTWSDLAKTWLRFATDIEANEGLLDEWEKPTKKAQNEE*
Ga0105247_109109052	3300009101	Switchgrass Rhizosphere	MPIDPSDCRQHALDCVRMAQTANSPEARKIWSDLARTWLRFASHLEASESLLYEWGKP
Ga0105247_112743381	3300009101	Switchgrass Rhizosphere	ENTLMPVDPGECRQHALDCVRMAQTATSPEARKIWSDLARTWLRFASDLEANECLLDEWGKPKPKKASE*
Ga0111538_114073432	3300009156	Populus Rhizosphere	MPVDPGECRQHALDCVRMAQTATSPEARKIWSDLARTWLRFATDLEASQCLLDEWGRPKAKKH
Ga0111538_114962881	3300009156	Populus Rhizosphere	MPVDPSECRQHALDCVRMAQTATSPEARKIWSDLARTWLRFATDLEANEGLLDEWGK
Ga0075423_103372841	3300009162	Populus Rhizosphere	MRIDPGDCRQHALDCVRLAQTSTTPEARETWSDLAKTWLRFASDLEANECLFDEWGRPKHYPAL
Ga0126380_116458062	3300010043	Tropical Forest Soil	MPIDPGECRQHALDCVRLAQTATTPEAREIWSDLAKTWLTFASDPEANEGLLDQWDKPDA
Ga0126382_107403062	3300010047	Tropical Forest Soil	PKATLMPVNPTECRQHALVCVRLAQTATTPEARKIWSDLAKTWLRFASDLEANLEGLLDEWGKPKPRGTQTE*
Ga0126370_119576571	3300010358	Tropical Forest Soil	IDPSECRQHALDCVRLAQAATTPEARKTWSDLAKTWLRFASDLEANEGLLDEWGNPRPKKAQTEE*
Ga0126376_106692681	3300010359	Tropical Forest Soil	MPVDPTECRQHALVCVRLAQTATTPEARKIWSDLAKTWLRFASDLEANLEGLLDEWGKPKPRGTQTE*
Ga0126379_118341012	3300010366	Tropical Forest Soil	PSECRQRALDCVRLAQTATTPEARKIWSDLATTWLMFASDLEANERLLDEWGRPKLKKHQTE*
Ga0134128_114922302	3300010373	Terrestrial Soil	TIDPGECRQRALDCVRLAQTATTPEARKTWSDLAKTWLMFASDLEANEGLLDEWGKPTKKAQNEE*
Ga0134126_130859571	3300010396	Terrestrial Soil	ETTLMPVDPSECRQHALDCVRMAQTANDSQARKIWSDLARTWLRFATDLEANEGLLDEWGKPQPKRHQTES*
Ga0134124_128036691	3300010397	Terrestrial Soil	MPVDPSECRQHALDCVRMAQTANDSQARKIWSDLARTWLRFATDLEANEGLLDEWGKPQPKRHQTE
Ga0157304_10614701	3300012882	Soil	MGFFWSGETTLMPVDPSECRQHALDCVRMAQTANDPKARKVWSDLARTWLRFATDLEANECLLDEWGRPKPKGTQTGV*
Ga0157304_11053221	3300012882	Soil	ETTLMPVDPSGCRQHALDCVRMAQTATSPEARKIWSDLARTWLRFATDLEANECLLDEWGKPKPKKHQSES*
Ga0157292_101428602	3300012900	Soil	VDPGDCRQHALDCVRLAQTSTTPEEKETWSDLAKTWLRFASDLEANEGLFDEWGRPKPKRTHTGE*
Ga0157308_102291082	3300012910	Soil	SECRQHALDCVRMAQTANDPKARKVWSDLARTWLRFATDLEANECLLDEWGRPKSKKHQTEP*
Ga0157306_100369411	3300012912	Soil	MPVDPSGCRQHALDCVRMAQTATSPEARKIWSDLARTWLRFASDLEVSQCLLDEWGKPKPKKHETESKAG*
Ga0182008_108684121	3300014497	Rhizosphere	MPIDPSECRQHALDCVRMAQTAKDPEAKKVWPDLARTWLRFASDLEVSECLLDEWGRPKHKKSPTE*
Ga0132258_103792425	3300015371	Arabidopsis Rhizosphere	MPFDPSECRQHALDCVRMAQTATTPEARKTWSDLAKTWLRFATDIEANEGLLDEWGKPTKKAQNEE*
Ga0132257_1010532212	3300015373	Arabidopsis Rhizosphere	RQRALECVRLAQTTKDPEARQVWSDLAKTWLTLAFDLEANECLMDEWGKPKPRGKKAADS
Ga0182037_111449872	3300016404	Soil	ALDCVRLAQTATTPEARNTWSDFAKTWLRFAHDLEANECLLDEWGKPRPKEAQTEE
Ga0182037_116731381	3300016404	Soil	DPSECREHALHCVRMSHTSSSPEAREIWSDLAKTWLRFASDLEANEGLLDKWGKV
Ga0182039_101872093	3300016422	Soil	DPGECRQHALDCVRLAQTATTLEARKTWSDLAKTWLRFASDLEANECLLDEWGKPRSKKTQTEE
Ga0207649_112627142	3300025920	Corn Rhizosphere	SLIISIALVDPGDCRQHALDCVRLAQTSTTPEEKETWSDLAKTWLRFASDLEANEGLFDEWGRPKPKRTHTGE
Ga0207675_1019094842	3300026118	Switchgrass Rhizosphere	MPIDPSECRQHALDCVRLAQTAKDPEARKIWSDLARTWLRFASDLEANEGLLDEWGRPKPKG
Ga0209382_107647731	3300027909	Populus Rhizosphere	LVDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFATDLEASESLLDEWGRPKTKSSEPEE
Ga0209382_122138112	3300027909	Populus Rhizosphere	MPVDPSECRQHALDCVRLAQTANSPEARKIWSDLARTWLMFATDLEANKGLLDEWGRPKP
Ga0247827_110607411	3300028889	Soil	MPVDPSECRQHSLDCVRMAQTAKDPEARKIWSDLARTWLRFASDLEANEGLLDEWGKLKPKKRLTE
Ga0318541_107089001	3300031545	Soil	MGVDPGECREHALDCVRMAQTASTPDVGEIWSDLARTWLRFATDIEANECLLDEWGKPRPKQAQTE
Ga0318538_106026582	3300031546	Soil	MSVDPSECRQHALNCVRMAQTATTPEARKIWSDLAKTWLRFATDLEENESLLDEWGRPGPRKTQTE
Ga0318561_101442001	3300031679	Soil	LMGVDPGECREHALDCVRMAQTASTPDVGEIWSDLARTWLRFATDIEANECLLDEWGKPRPKQAQTETAPTSQRF
Ga0306917_102230143	3300031719	Soil	TTLMPIDSSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEANECLLDEWGNPRPKKAQTEE
Ga0318550_105513701	3300031797	Soil	MVDPGECRQHALDCVRMAQTATTPEARKIWSDLARTWLRFASDLEANEGLLDEWERPEPKKHQTES
Ga0310892_113476371	3300031858	Soil	MPIHPNDCRQRALHCGRMAQTVNDPQARKTWSDLAKTWLRFATDLEASESLLDEWGRPKTKSSEPEE
Ga0306923_100447446	3300031910	Soil	MGVDPGECREHALDCVRMAQTASTPDVGEIWSDLARTWLRFATDIEANECLLDEWGKPRPKQAQTETAPTSQRF
Ga0306923_102540815	3300031910	Soil	TWPGLLFDWQKAETTLMPIDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEANECLLDEWGNPRPKKAQTEE
Ga0318531_105645361	3300031981	Soil	MRIDPSDCRQHALDCVRMAQTSITPEARKIWSDLARTWLVFASDIEANECLLDEW
Ga0306922_104333693	3300032001	Soil	MRIDPSDCRQHALDCVRMAQTSITPEARKIWSDLARTWLVFASDIEANECLLDEWGKPERKSTQTG
Ga0306924_102520521	3300032076	Soil	LMPIDPSECRQHALDCVRLAQTATTPEARKTWSDLAKTWLRFASDLEANECLLDEWGNPRPKKAQTEE
Ga0310914_110416312	3300033289	Soil	MRIDPSDCRQHALDCVRMAQTSITPEARKIWSDLARTWLVFASDIEANECLLDEWGKPERKSIQTG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092563

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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