Metagenome / Metatranscriptome Family F092569

Basic Information
Family ID	F092569
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	53 residues
Representative Sequence	MRAVIGRVKIKPDRADEALAMIGETGVAMLRGMIGSAGGYWARSHGGDIIQH
Number of Associated Samples	93
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	96.26 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (78.505 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.019 % of family members)
Environment Ontology (ENVO)	Unclassified (28.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.187 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.50% β-sheet: 5.00% Coil/Unstructured: 77.50%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00196	GerE	45.79
PF00067	p450	1.87
PF07690	MFS_1	1.87
PF02627	CMD	0.93
PF14833	NAD_binding_11	0.93
PF02737	3HCDH_N	0.93
PF10400	Vir_act_alpha_C	0.93
PF00583	Acetyltransf_1	0.93
PF08220	HTH_DeoR	0.93
PF12680	SnoaL_2	0.93
PF00892	EamA	0.93
PF05191	ADK_lid	0.93
PF13466	STAS_2	0.93
PF00872	Transposase_mut	0.93
PF07110	EthD	0.93
PF00144	Beta-lactamase	0.93
PF05988	DUF899	0.93
PF00296	Bac_luciferase	0.93
PF08241	Methyltransf_11	0.93
PF12697	Abhydrolase_6	0.93
PF13601	HTH_34	0.93
PF00171	Aldedh	0.93
PF00089	Trypsin	0.93
PF01915	Glyco_hydro_3_C	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	1.87
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.93
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.93
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.93
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.93
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.93
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.93
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.93
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.93
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.93
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.93
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.93
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.93
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.93
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.93
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.93
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.93
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.50 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.50 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.50 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	71.96 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.09 %
Unclassified	root	N/A	21.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	57.01 %
Unclassified	root	N/A	21.50 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5.61 %
Sporichthyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales	3.74 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.93 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.89 %
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	4.67 %
Sporichthyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae	3.74 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.93 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.89 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	4.67 %
unclassified Sporichthyaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae	3.74 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.93 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.93 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.93 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.89 %
Gordonia rhizosphera	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rhizosphera	4.67 %
Sporichthyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae → Sporichthyaceae bacterium	3.74 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.93 %
Jiangella mangrovi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella mangrovi	0.93 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.93 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.93 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.89 %
Gordonia rhizosphera NBRC 16068	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rhizosphera → Gordonia rhizosphera NBRC 16068	4.67 %
Sporichthyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae → Sporichthyaceae bacterium	3.74 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.93 %
Streptomyces sp. Tu6071	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	0.93 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.93 %
Jiangella mangrovi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella mangrovi	0.93 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig17401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	805	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101169175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	855	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101732748	Not Available	551	Open in IMG/M
3300004479\|Ga0062595_101910204	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005332\|Ga0066388_101345660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1235	Open in IMG/M
3300005335\|Ga0070666_11254754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rhizosphera → Gordonia rhizosphera NBRC 16068	552	Open in IMG/M
3300005335\|Ga0070666_11434388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300005337\|Ga0070682_101301532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	617	Open in IMG/M
3300005339\|Ga0070660_100628740	Not Available	899	Open in IMG/M
3300005435\|Ga0070714_102264515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300005436\|Ga0070713_101765253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300005440\|Ga0070705_101936986	Not Available	502	Open in IMG/M
3300005468\|Ga0070707_100862333	Not Available	870	Open in IMG/M
3300005539\|Ga0068853_102229903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300005548\|Ga0070665_101019203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae → Sporichthyaceae bacterium	840	Open in IMG/M
3300005553\|Ga0066695_10305192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1003	Open in IMG/M
3300005574\|Ga0066694_10084098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1477	Open in IMG/M
3300005614\|Ga0068856_100358616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella mangrovi	1476	Open in IMG/M
3300005615\|Ga0070702_100525899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	873	Open in IMG/M
3300005764\|Ga0066903_102031548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1105	Open in IMG/M
3300006028\|Ga0070717_12035295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300006046\|Ga0066652_102026114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300006059\|Ga0075017_101293962	Not Available	572	Open in IMG/M
3300006059\|Ga0075017_101361938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300006173\|Ga0070716_101186159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300006175\|Ga0070712_100385333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1155	Open in IMG/M
3300006175\|Ga0070712_101137024	Not Available	678	Open in IMG/M
3300006358\|Ga0068871_101660179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300006581\|Ga0074048_13185707	Not Available	2382	Open in IMG/M
3300006755\|Ga0079222_10853236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae → Sporichthyaceae bacterium	754	Open in IMG/M
3300009162\|Ga0075423_11942435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300009176\|Ga0105242_12680533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rhizosphera → Gordonia rhizosphera NBRC 16068	548	Open in IMG/M
3300009545\|Ga0105237_12548672	Not Available	522	Open in IMG/M
3300009792\|Ga0126374_11195675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rhizosphera → Gordonia rhizosphera NBRC 16068	608	Open in IMG/M
3300010320\|Ga0134109_10184487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae → Sporichthyaceae bacterium	764	Open in IMG/M
3300010358\|Ga0126370_11239646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	696	Open in IMG/M
3300010362\|Ga0126377_13464146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300010398\|Ga0126383_10630041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1146	Open in IMG/M
3300012207\|Ga0137381_10696891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883	Open in IMG/M
3300012955\|Ga0164298_11554906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300012971\|Ga0126369_11204774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300012984\|Ga0164309_11719002	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300012989\|Ga0164305_11739400	Not Available	561	Open in IMG/M
3300013296\|Ga0157374_12649117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300015372\|Ga0132256_101606411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300016319\|Ga0182033_11757333	Not Available	562	Open in IMG/M
3300017959\|Ga0187779_10699098	Not Available	685	Open in IMG/M
3300017966\|Ga0187776_11395365	Not Available	533	Open in IMG/M
3300017999\|Ga0187767_10025051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1326	Open in IMG/M
3300018032\|Ga0187788_10550034	Not Available	505	Open in IMG/M
3300018060\|Ga0187765_10237754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1068	Open in IMG/M
3300018060\|Ga0187765_10562248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300018433\|Ga0066667_11080854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300019877\|Ga0193722_1019383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1756	Open in IMG/M
3300020021\|Ga0193726_1059580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1800	Open in IMG/M
3300020581\|Ga0210399_11484982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300021403\|Ga0210397_10466549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	952	Open in IMG/M
3300021405\|Ga0210387_10129050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2144	Open in IMG/M
3300021405\|Ga0210387_11039319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae → Sporichthyaceae bacterium	716	Open in IMG/M
3300021407\|Ga0210383_11088860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300025898\|Ga0207692_10717906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300025898\|Ga0207692_11135405	Not Available	518	Open in IMG/M
3300025905\|Ga0207685_10013589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2523	Open in IMG/M
3300025915\|Ga0207693_10995056	Not Available	640	Open in IMG/M
3300025918\|Ga0207662_10036613	All Organisms → cellular organisms → Bacteria	2869	Open in IMG/M
3300025939\|Ga0207665_10220534	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300025986\|Ga0207658_11289330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300026538\|Ga0209056_10564324	Not Available	577	Open in IMG/M
3300027646\|Ga0209466_1097849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300027725\|Ga0209178_1215385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	684	Open in IMG/M
3300027725\|Ga0209178_1384929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rhizosphera → Gordonia rhizosphera NBRC 16068	530	Open in IMG/M
3300027775\|Ga0209177_10120498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300027882\|Ga0209590_10385767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300029636\|Ga0222749_10492359	Not Available	662	Open in IMG/M
3300030946\|Ga0075379_10253308	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031057\|Ga0170834_109992631	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300031543\|Ga0318516_10755055	Not Available	551	Open in IMG/M
3300031544\|Ga0318534_10399228	All Organisms → cellular organisms → Bacteria → Terrabacteria group	790	Open in IMG/M
3300031561\|Ga0318528_10692542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300031740\|Ga0307468_100136185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1546	Open in IMG/M
3300031751\|Ga0318494_10386251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	811	Open in IMG/M
3300031820\|Ga0307473_10057731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1878	Open in IMG/M
3300031859\|Ga0318527_10528963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300031912\|Ga0306921_10233894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2153	Open in IMG/M
3300032055\|Ga0318575_10219208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	957	Open in IMG/M
3300032068\|Ga0318553_10262782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	902	Open in IMG/M
3300032068\|Ga0318553_10516458	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300032076\|Ga0306924_11108838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300032180\|Ga0307471_100843355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1084	Open in IMG/M
3300032261\|Ga0306920_103015118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300032770\|Ga0335085_10058463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5164	Open in IMG/M
3300032770\|Ga0335085_10168820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	2719	Open in IMG/M
3300032805\|Ga0335078_10272827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2292	Open in IMG/M
3300032805\|Ga0335078_10709599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1244	Open in IMG/M
3300032828\|Ga0335080_12030663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300032828\|Ga0335080_12406878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300032892\|Ga0335081_11781674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300032954\|Ga0335083_10724123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300033004\|Ga0335084_10397010	Not Available	1421	Open in IMG/M
3300033004\|Ga0335084_11043905	Not Available	822	Open in IMG/M
3300033158\|Ga0335077_11693679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300033805\|Ga0314864_0053374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	926	Open in IMG/M
3300034090\|Ga0326723_0087494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1340	Open in IMG/M
3300034151\|Ga0364935_0137592	Not Available	767	Open in IMG/M
3300034818\|Ga0373950_0130038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rhizosphera → Gordonia rhizosphera NBRC 16068	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.92%
Host-Associated	Host-Associated	13.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.05%
Plants	Host-Associated → Plants	13.08%
Aquatic	Environmental → Aquatic	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.28%
Sediment	Environmental → Aquatic → Sediment	1.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Peat	Environmental → Terrestrial → Peat	0.93%
Floodplain	Environmental → Terrestrial → Floodplain	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.73%
Loam	Environmental → Terrestrial → Soil → Loam	18.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.15%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.28%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030946	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092569

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_01492270	2124908032	Soil	MHAVIGRVKIKPGRADEALSMVGERGVAMLRGMEGATGGYWARSLNSDIIQHS
INPhiseqgaiiFebDRAFT_1011691751	3300000364	Soil	MHAVIGRVQIKPGREDETRAMVGEHGVAMLQGMPGSTGGYWARTVDGD
INPhiseqgaiiFebDRAFT_1017327482	3300000364	Soil	MHAVIGRVKIKPGCEDETLAMITEHGVAMVQGMAGSTGG
Ga0062595_1019102041	3300004479	Soil	MYAVIGRVKIKPDRADEALAMIGDRGVAMLQGMAGSANGYWARSNGDDIIQHSF
Ga0066388_1013456601	3300005332	Tropical Forest Soil	MLGPRPGRHGGLMHAVIGRVKIKPGRADETLAMIGEGGVPMLRGMAGCAGGYWARSDGGEIIQHSFWLFDTEEDARAAETIFN
Ga0070666_112547541	3300005335	Switchgrass Rhizosphere	MHAVIGRVKIMPGQDEETLAMIAEGGIPMVRGMAGSAGGYWARSNGGDIIQHSFWLFDTEENARAAEAT
Ga0070666_114343881	3300005335	Switchgrass Rhizosphere	MRAVIGRVRIKPERADEALAMIGETGVAMLRGMIGSAGGYWARSHRGDIIQHSFWLFDTEENARAAE
Ga0070682_1013015323	3300005337	Corn Rhizosphere	MRAVIGRVKIKPGRADDALAMVGETGVAMLRGMIGSAGGYWARSHGGDIIQHSF
Ga0070660_1006287402	3300005339	Corn Rhizosphere	MRAVIGRVRIKPERADEALAMIGETGVAMLRGMIGSAGGYWARSHRGDIIQHSFWLFDTE
Ga0070714_1022645153	3300005435	Agricultural Soil	MRAVIGRVKIKPDRADEALAMIGEMGVAMLRGMTGSAGGYWARSRGGDIIQHSFWLFDTEEN
Ga0070713_1017652531	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVIGLVKIKPDQADETLAMIGDTGVAMLRGMIGSAGGYWARSHGGDIIQHS
Ga0070705_1019369862	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VHALIGRVNLKPERADEALSMLRENGAAMLQGMTGSAGGYWAR
Ga0070681_118117451	3300005458	Corn Rhizosphere	MYAVIGRVKITPGHEDETRAMIADLGVAMPQGMDGSIGGYWS
Ga0070707_1008623332	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVIGRVKIKPDRAEEALAMLGEKGIAMLQGMAGSAGGYWARSHGGDIIQHSFWLFD
Ga0068853_1022299031	3300005539	Corn Rhizosphere	MRAVIGRVKIKPDQADETLAMIGDTGVAMLRGMIGSAGGYWARSHGGDIIQHSFWLFDTEENARAAEATFN
Ga0070665_1010192032	3300005548	Switchgrass Rhizosphere	MRAVIGRVKIKPGRADEALAMIGETGAAMLQGMAGSAGGYWARSNGDDIIQHSFW
Ga0066695_103051922	3300005553	Soil	MHAVIGRVKIVPDRADEALAMIGEGGVAMLRGMTGSAGGYWARSGEG
Ga0066694_100840981	3300005574	Soil	MHAVIGRVKIVPARADEALAMIGAGGVPMLRGMAGSA
Ga0068856_1003586164	3300005614	Corn Rhizosphere	MHAVIGRVTIKPGREDETLAMVREGGVAMLSGMSG
Ga0070702_1005258992	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VHAVIGRVSIKPDRADEAFSMISQFGVPMLQGMPGSAGGYWARSLDGELIQHSFWLFDNEAD
Ga0066903_1020315482	3300005764	Tropical Forest Soil	MHAVIGRVKIKPGRADETLAMIGEGGVPMLRGMAGSAGGYWARSNGGDILQHSFWLFDTEEN
Ga0070717_120352951	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MYALIGRVKIRPGHEDETRAMIIEHGVPMFRGMPGAADAYWARALDGEL
Ga0066652_1020261142	3300006046	Soil	MHAVIGCVKIKPERADEALALLSDRGTAMLQGMAGSAGGYWARSHADDIIQHSFWLFDTE
Ga0075017_1012939622	3300006059	Watersheds	MHAVIGRVRIKPGHEDETRAMIGDHGIAMIRGMAGSS
Ga0075017_1013619381	3300006059	Watersheds	MRAVIGQVKIKPDRADEALAMIGERGVAMLQGMAGSAGGYWARSLGDDIIQHSFWLFDTEENARAAEATFNQ
Ga0070716_1011861592	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVIGRVKIKPDQADETLAMIGDTGVAMLRGMIGSAGGYWARSHGGDIIQHSFWLF
Ga0070712_1003853333	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVIGRVKIKPDRAGEALAMIGETGVAMLRGMIGSA
Ga0070712_1011370242	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHAVIGRVTIKPGREDETLAMVREGGVAMLSGMSGSTGG
Ga0068871_1016601791	3300006358	Miscanthus Rhizosphere	MRAVIGRVKIKPDQADETLAMIGDTGVAMLRGMIGSAGGYWARSHGGDIIQHSFWLFDTEENA
Ga0074048_131857072	3300006581	Soil	MHAVIGRVRIKPDQADETLSMIGERGVAMLQGMAGSEGGYWARTLEGDIVQHSFW
Ga0079222_108532361	3300006755	Agricultural Soil	MHAVIGRVKIVPDRADEALAMIGDGGVPMLRGMTG
Ga0075423_119424351	3300009162	Populus Rhizosphere	MHAVIGRVTIKPGREDETLAMVRERGVAMLGGMAGSAGGYWARAVEGEVVQHSFWLFDTEEDSRAAEVTFKTCRMHRRRS*
Ga0105242_126805331	3300009176	Miscanthus Rhizosphere	MHAVIGRVKIMPGQDEETLAMIAEGGIPMVRGMTGSAGGYWARSNGGDIIQHSFWL
Ga0105237_125486722	3300009545	Corn Rhizosphere	MHAVIGRVKIKPDRADEALALLTDRGTAMLRGMAGSAGGYWARSHADDI
Ga0126374_111956752	3300009792	Tropical Forest Soil	MHAVIGRVKIKPGRADETLAMIGEGGVPMLRGMAGCAGGYWAR
Ga0134109_101844871	3300010320	Grasslands Soil	MHAVIGRVKIVPARADEALAMIGAGGVPMLRGMAGSAGGYWA
Ga0126370_112396461	3300010358	Tropical Forest Soil	MRAVIGRVKIKPDRADEALAMIGEGGVAMLRGMPGSVGGYWARSLEGDIIQHSF
Ga0126377_134641461	3300010362	Tropical Forest Soil	MHAVIGRVKIKPGRADETLAMIGEGGVPMLRGMAGCAGGYWARSDGGEIIQHSFWLFDTEEDARAA
Ga0126383_106300411	3300010398	Tropical Forest Soil	MRAVIGRVKIKPDRADEALAMIGEGGVAMLRGMPGSVGGYWARSLEGDIIQHSFWLFDTEENAEA
Ga0137381_106968912	3300012207	Vadose Zone Soil	MHAVIGRVKIKPDRADEALAMIAEGGVAMLQGMAGSSGGYWARSLEGDII
Ga0164298_115549061	3300012955	Soil	MHAVIGQVKIKSGHEDETREMIDSHGVAMVQGMAGSV
Ga0126369_112047742	3300012971	Tropical Forest Soil	MRAVIGRVKIKPDRADEALAMIGEGGVAMLRSMPGSAGGYWARSLEGDI
Ga0164309_117190022	3300012984	Soil	MHAVIGRVNIKPDRADEALSMISTRGVAMLRGMTGSVSGVWARTLEGDLIQHSCWLFDSEEHARAAAAT
Ga0164305_117394002	3300012989	Soil	MLMHAVIGRVTIKPGREGETLAMVREGGVAMLGGMSGSAGG
Ga0157374_126491171	3300013296	Miscanthus Rhizosphere	MHAVIGRVKIKPGHEDETLTMIGEHGVAMLRGMSGSAGGY
Ga0132256_1016064112	3300015372	Arabidopsis Rhizosphere	MHAVIGRVKIKPGHEDETVAMIDEHGVAMLQGMAGSAGGYWARALVEGDLIQYSLWLVDGEENARVADILTSTRPNDAMTT*
Ga0182033_117573332	3300016319	Soil	MHAVIGRVRIKPGCEDETLAMIQEHGIAMLQGMAGSEGGYWARSHDEADVIQHSLWLFDTEEHA
Ga0187779_106990981	3300017959	Tropical Peatland	MFAVIGRVELKPDRADEALAMLGERGAAMVQDMPGF
Ga0187776_104676071	3300017966	Tropical Peatland	MHAVIGRVKIKPGRTGETLAMIAEGGVPMLRGMAGSAGGYWARSDGGDIIQHSFWLFDTEENARAAE
Ga0187776_113953651	3300017966	Tropical Peatland	MFAVIGRVELKPDRADEALAMLGERGAAMVQDMPGSSGGYWARN
Ga0187767_100250512	3300017999	Tropical Peatland	MHAVIGRVKIVPDRADEALAMIGDGGVPMLRGMAGSAGGYWARCH
Ga0187788_105500342	3300018032	Tropical Peatland	MFAVIGRVELKPGRADEALAMIGERGVAMLQGMSGSSGGYWARNLDGDDIQH
Ga0187765_102377541	3300018060	Tropical Peatland	MHAVIGRVKIVPDRADEALAMIGEGGVPMLRGMTGSAGGYWARSQEGDIIQHS
Ga0187765_105622481	3300018060	Tropical Peatland	MHAVIGQVKIKPGHADETLAMIGEHGVAMVRGMTGSAGGYWARSLDGGELIQHSFWLFDTAENARAAEAT
Ga0066667_110808542	3300018433	Grasslands Soil	MHAVIGRVKIVPDRADEALAMIGEGGVAMLRGMTGSAGGYWARSGEGDII
Ga0193722_10193831	3300019877	Soil	MRAVIGRVKIKQDRADEALAMVGEKGVAMLRGMIG
Ga0193726_10595801	3300020021	Soil	MHALIGQVKIKPDRADEALAMIGAAGVAMLRGMAGSAGGYWARS
Ga0210399_114849821	3300020581	Soil	MRAVIGRVKIKPDRADEALTMIGERGVAMLQGMAGSTGGYWARSLEGDIIQHSFWLFDT
Ga0210397_104665491	3300021403	Soil	MRAVIGRVKIKPDRADEALTMIGERGVAMLQGMAGSTGGYWARSLEGDIIQHSFWLFDTE
Ga0210387_101290503	3300021405	Soil	MRAVIGRVKIKSDRADEALMMIGERGVAMLQGMAGSTGGYWARSLEGDIIQHSFWLFDTEEH
Ga0210387_110393191	3300021405	Soil	MRAVIGRVKIKPDRADEALTMIGERGVAMLQGMAGSTGGYWARSLEGDIIQHSFWLFDTEEH
Ga0210383_110888601	3300021407	Soil	MRAVIGRVRIKADRSGEALGMVRERGITMLRGMAGSAGGYWARNLDGDLVQHSFWLFDTEENARAAAATFS
Ga0207692_107179061	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVIGRVRIKPERADEALAMIGETGVAMLRGMIGSAGGYWARSHRGDIIQHSFWLFDTEENARAAEATFNK
Ga0207692_111354051	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVIGRVKIKPDQADETLAMIGDTGVAMLRGMIGSAGGYWARSHGGDIIQHSF
Ga0207685_100135893	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVIGRVKIKPGRADEALAMIGETGAAMLQGMAGSA
Ga0207693_109950561	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MYAVIGRVKIKPGQEDETLTMIKERGVAMLEGMAGSAIGYW
Ga0207662_100366131	3300025918	Switchgrass Rhizosphere	MRAVIGRVKIKPDQADETLAMIGDTGVAMLRGMIGSAGGYWARSHG
Ga0207665_102205341	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MYAVVGRVRIDPDRADEALAMIKNGGIAMVRGMAGSAGGYWARNVAGDIVQHSFWLFDTEQH
Ga0207658_112893301	3300025986	Switchgrass Rhizosphere	MYAVIGRVKIKPGHEDETRAMITDHGVAMLRGMNGAS
Ga0209056_105643241	3300026538	Soil	MRAVIGRVKIKPDRADEALAMIGETGVAMLRGMVGSAGGYWARS
Ga0209466_10978491	3300027646	Tropical Forest Soil	MHAVIGRVKIMPGRADETLAMIGDGGVPMLRGMAGSVGGYWARSHEGDVIQHSFWLFDTEENARAAE
Ga0209178_12153852	3300027725	Agricultural Soil	MHAVIGRVKIKPDRADEALALLTDRGTAMLQGMAGSAGGYWARSHADDIIQHSFWLFDTEENARTAEATFH
Ga0209178_13849291	3300027725	Agricultural Soil	MHAVIGRVKIVPDRADEALAMIGDGGVPMLRGMTGSAGGYWARSHEGDIVQHSFWLF
Ga0209177_101204981	3300027775	Agricultural Soil	MHAVIGRVKIKPDRADEALALLTDRGTAMLQGMAGSAGGYWARSHADDIIQHSFWLFDTEENARTA
Ga0209590_103857671	3300027882	Vadose Zone Soil	MHAVIGRVKIKPDRADEALAMIAEGGVAMLQGMAGSSGGYWARSLEGYIIQHS
Ga0222749_104923591	3300029636	Soil	MRAVIGRVKIKPDRADEALAMIGETGVAMLRGMIGSAGGYWARSHGGDIIQH
Ga0075379_102533081	3300030946	Soil	MFAVIGRVQIKPDHADETLAMVSDHGEAMLRSMTGSNGGYW
Ga0170834_1099926312	3300031057	Forest Soil	MFAVIGRVQIKPDHADETLAMVSDHGEAMLRSMTGSNGGYWARTVDGGDLIQHSFWLFDT
Ga0318516_107550551	3300031543	Soil	MHAVIGRVRIKPGCEDETLAMIQEHGIAMLQGMAGSEGG
Ga0318534_103992282	3300031544	Soil	MHAVIGRVKVKPGREEETRAMISERGVAMLQGMAGSVGGYWARSVDD
Ga0318528_106925422	3300031561	Soil	MHAVIGRVKIKPGRADEALAMIGDMGVAMLHGMPGSADGYWARSHDDGIIQHSFWL
Ga0307468_1001361853	3300031740	Hardwood Forest Soil	MHAVIGRVEIKPDRAEEALAMIGDRGVAMLRGMPGATGGYWARSLDGELIQHSFWLFDTEEHAREAEAT
Ga0318494_103862512	3300031751	Soil	MHAVIGRVKIKPGRADEALAMIGDMGVAMLHGMPGSADGYW
Ga0307473_100577312	3300031820	Hardwood Forest Soil	MHAVIGRVKIMPGQDEETLAMIAEGGIPMVRGMTGSAGGYWARSNGGDIIQHSFWLFDTEENA
Ga0318527_105289631	3300031859	Soil	MHAVIGRVKIKPGHEDETRGMIADHGAAMVQGMPGAAAGYW
Ga0306921_102338943	3300031912	Soil	MHAVIGRVKIKPGRADEALAMIGDMGVAMLHGMPGS
Ga0318575_102192081	3300032055	Soil	MHAVIGRVKIKPGRADEALAMIGDMGVAMLHGMPGSADGYWARS
Ga0318553_102627822	3300032068	Soil	MHAVIGRVKIKPGRADEALAMIGDMGVAMLHGMPGSADGYWARSHDDGIIQHSFWLFDTEENARAAEAAFKQL
Ga0318553_105164581	3300032068	Soil	MYALIGRVKIKPGHEEQTRAMITEHGVPMLQGMTGAAGAY
Ga0306924_111088382	3300032076	Soil	MHAVIGRVKIKPGRADEALAMIGDMGVAMLHGMPGSADGYWARSHDDGIIQ
Ga0307471_1008433551	3300032180	Hardwood Forest Soil	MRAVIGRVKIKPDRADEALAMIGETGVAMLQGMTGSAGGYWARSGG
Ga0306920_1030151181	3300032261	Soil	MRAVIGRVKIKPDRADEALAMIGEGGVAMLRGMPGS
Ga0335085_100584631	3300032770	Soil	MHAVIGRVKIKPDRADEALALLTDRGTAMLQGMAGS
Ga0335085_101688202	3300032770	Soil	MRAVIGRVRIKPDRADEALAMIGETGVAMLRDMMGSAGGYWARSYGDDIVQHSFWLFDTEENARAAE
Ga0335078_102728273	3300032805	Soil	MRAVIGRVKIKPDRADEALAMIGERGAVMLQGMAGSAGGYWA
Ga0335078_107095992	3300032805	Soil	MHAVIGRVKIVPDRADEALAMIGEGGVPMLRGMTGSAGGYWARSQEGDIIQHSFWLFDTEENA
Ga0335080_120306632	3300032828	Soil	MRAVIGRVKIKPDRADEALAMIGERGAVMLQGMAGSA
Ga0335080_124068781	3300032828	Soil	MHAVIGRVKIMPGRSDEALAMIGNSGVGMLRGMTGSVGGYWARSHGGDIIQHSFWLFDTEENARAAE
Ga0335081_117816742	3300032892	Soil	MHAVIGRVKIVPDRADEALAMIGEGGVPMLRGMTGSAGGYWARSQEGDIIQHSFWLFDTVENARAAEATFNQLR
Ga0335083_107241231	3300032954	Soil	MHAVIGRVKIVPDRADEALAMIGDGGVPMLRGMTGSA
Ga0335084_103970101	3300033004	Soil	MHAVIGRVRITPDRADEALSMINDGGIAMLRGMEGASGGYWARSLEGDIIQHSFWLFDTEEN
Ga0335084_110439053	3300033004	Soil	MHAVIGRVTIKPGREDETLAMIGERGVAMLQGMVGSAGGYWARTLAE
Ga0335077_116936792	3300033158	Soil	MHAVIGRVKIVPDRADEALAMIGEGGVPMLRGMTG
Ga0314864_0053374_815_925	3300033805	Peatland	MHAVIGRVKIVPDRADEALAMIGEGGVPMLRGMTGSA
Ga0326723_0087494_1157_1339	3300034090	Peat Soil	MFAVIGRVELKPNRAEDALAMIGEGGVAMLQGMSGSKAGYWARNLDGDDIQHSFWLFDTE
Ga0364935_0137592_1_159	3300034151	Sediment	MHAVVGRVKIKPGREDETLAMIGEHGVAMLQGMAGCAGGYWARALVEGDLIQH
Ga0373950_0130038_394_561	3300034818	Rhizosphere Soil	MHAVIGRVKIMPGQDEETLAMIAEGGIPMVRGMAGSAGGYWARSNRGDIIQHSFWL

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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