Metagenome / Metatranscriptome Family F092622

Basic Information
Family ID	F092622
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	47 residues
Representative Sequence	AAAHSALRLKVPFATSDRLLALDIEEAAATVRRAEVQSQANSLLPSYR
Number of Associated Samples	98
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.39 %
% of genes from short scaffolds (< 2000 bps)	82.24 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Unclassified (51.402 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.234 % of family members)
Environment Ontology (ENVO)	Unclassified (24.299 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.729 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.53% β-sheet: 0.00% Coil/Unstructured: 64.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02599	CsrA	60.75
PF00367	PTS_EIIB	12.15
PF13505	OMP_b-brl	5.61
PF02378	PTS_EIIC	3.74
PF02896	PEP-utilizers_C	3.74
PF00691	OmpA	1.87
PF00381	PTS-HPr	1.87
PF10014	2OG-Fe_Oxy_2	1.87
PF05524	PEP-utilisers_N	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1551	sRNA-binding carbon storage regulator CsrA	Signal transduction mechanisms [T]	60.75
COG1264	Phosphotransferase system IIB components	Carbohydrate transport and metabolism [G]	12.15
COG1925	HPr or related phosphotransfer protein	Signal transduction mechanisms [T]	1.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.40 %
All Organisms	root	All Organisms	48.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.40 %
cellular organisms	root	All Organisms → cellular organisms	48.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8.41 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10282275	Not Available	668	Open in IMG/M
3300002245\|JGIcombinedJ26739_100096223	All Organisms → cellular organisms → Bacteria	2768	Open in IMG/M
3300005356\|Ga0070674_100613382	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300005435\|Ga0070714_100022396	All Organisms → cellular organisms → Bacteria → Proteobacteria	5181	Open in IMG/M
3300005435\|Ga0070714_101245989	Not Available	726	Open in IMG/M
3300005518\|Ga0070699_102016084	Not Available	527	Open in IMG/M
3300005526\|Ga0073909_10005604	All Organisms → cellular organisms → Bacteria → Proteobacteria	3699	Open in IMG/M
3300005541\|Ga0070733_10449741	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300005553\|Ga0066695_10309019	All Organisms → cellular organisms → Bacteria → Proteobacteria	996	Open in IMG/M
3300006173\|Ga0070716_100191688	All Organisms → cellular organisms → Bacteria → Proteobacteria	1351	Open in IMG/M
3300006174\|Ga0075014_100392355	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300006175\|Ga0070712_100379275	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300006176\|Ga0070765_100950152	Not Available	813	Open in IMG/M
3300006871\|Ga0075434_100137247	All Organisms → cellular organisms → Bacteria → Proteobacteria	2465	Open in IMG/M
3300007258\|Ga0099793_10099975	All Organisms → cellular organisms → Bacteria → Proteobacteria	1341	Open in IMG/M
3300010043\|Ga0126380_10536029	Not Available	907	Open in IMG/M
3300010048\|Ga0126373_10928534	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300010048\|Ga0126373_12525648	Not Available	573	Open in IMG/M
3300010048\|Ga0126373_12859876	Not Available	539	Open in IMG/M
3300010049\|Ga0123356_10829008	Not Available	1096	Open in IMG/M
3300010361\|Ga0126378_13027080	Not Available	535	Open in IMG/M
3300010364\|Ga0134066_10107583	Not Available	820	Open in IMG/M
3300010366\|Ga0126379_10618305	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300012205\|Ga0137362_10113502	All Organisms → cellular organisms → Bacteria → Proteobacteria	2292	Open in IMG/M
3300012357\|Ga0137384_10679950	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300012582\|Ga0137358_10067678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2396	Open in IMG/M
3300012925\|Ga0137419_10480580	All Organisms → cellular organisms → Bacteria → Proteobacteria	983	Open in IMG/M
3300012927\|Ga0137416_10504247	All Organisms → cellular organisms → Bacteria → Proteobacteria	1043	Open in IMG/M
3300012977\|Ga0134087_10031512	All Organisms → cellular organisms → Bacteria → Proteobacteria	2008	Open in IMG/M
3300014200\|Ga0181526_10718451	Not Available	630	Open in IMG/M
3300014968\|Ga0157379_12250806	Not Available	542	Open in IMG/M
3300015054\|Ga0137420_1266416	Not Available	530	Open in IMG/M
3300016319\|Ga0182033_11053343	Not Available	725	Open in IMG/M
3300016387\|Ga0182040_10223794	All Organisms → cellular organisms → Bacteria → Proteobacteria	1398	Open in IMG/M
3300016422\|Ga0182039_11269693	Not Available	667	Open in IMG/M
3300016422\|Ga0182039_11452607	Not Available	624	Open in IMG/M
3300017937\|Ga0187809_10228498	Not Available	667	Open in IMG/M
3300017961\|Ga0187778_10233908	Not Available	1177	Open in IMG/M
3300017970\|Ga0187783_10996191	Not Available	604	Open in IMG/M
3300017972\|Ga0187781_10455209	Not Available	916	Open in IMG/M
3300017973\|Ga0187780_10573894	Not Available	809	Open in IMG/M
3300017975\|Ga0187782_10182921	All Organisms → cellular organisms → Bacteria → Proteobacteria	1566	Open in IMG/M
3300020150\|Ga0187768_1003214	Not Available	3266	Open in IMG/M
3300020199\|Ga0179592_10062713	All Organisms → cellular organisms → Bacteria → Proteobacteria	1697	Open in IMG/M
3300020581\|Ga0210399_10484705	All Organisms → cellular organisms → Bacteria → Proteobacteria	1028	Open in IMG/M
3300020582\|Ga0210395_11063430	Not Available	598	Open in IMG/M
3300020582\|Ga0210395_11439108	Not Available	502	Open in IMG/M
3300021171\|Ga0210405_11367266	Not Available	517	Open in IMG/M
3300021403\|Ga0210397_10249788	All Organisms → cellular organisms → Bacteria → Proteobacteria	1287	Open in IMG/M
3300021444\|Ga0213878_10233048	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300021559\|Ga0210409_10486004	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300021560\|Ga0126371_10328007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1662	Open in IMG/M
3300021560\|Ga0126371_12915606	Not Available	580	Open in IMG/M
3300022726\|Ga0242654_10167586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	745	Open in IMG/M
3300025905\|Ga0207685_10822036	Not Available	513	Open in IMG/M
3300025938\|Ga0207704_10425885	Not Available	1053	Open in IMG/M
3300025941\|Ga0207711_10482024	All Organisms → cellular organisms → Bacteria → Proteobacteria	1155	Open in IMG/M
3300026078\|Ga0207702_10168489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2006	Open in IMG/M
3300026088\|Ga0207641_10396615	All Organisms → cellular organisms → Bacteria → Proteobacteria	1324	Open in IMG/M
3300026305\|Ga0209688_1041685	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300026314\|Ga0209268_1050490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1326	Open in IMG/M
3300026315\|Ga0209686_1006713	All Organisms → cellular organisms → Bacteria → Proteobacteria	4980	Open in IMG/M
3300026330\|Ga0209473_1069720	All Organisms → cellular organisms → Bacteria → Proteobacteria	1497	Open in IMG/M
3300026557\|Ga0179587_10249953	All Organisms → cellular organisms → Bacteria → Proteobacteria	1134	Open in IMG/M
3300027674\|Ga0209118_1063766	Not Available	1071	Open in IMG/M
3300027889\|Ga0209380_10540225	Not Available	678	Open in IMG/M
3300029636\|Ga0222749_10428336	Not Available	705	Open in IMG/M
3300029951\|Ga0311371_12384231	Not Available	543	Open in IMG/M
3300030046\|Ga0302305_1126252	Not Available	992	Open in IMG/M
3300030545\|Ga0210271_10711925	Not Available	549	Open in IMG/M
3300030687\|Ga0302309_10555146	Not Available	543	Open in IMG/M
3300030730\|Ga0307482_1167088	Not Available	651	Open in IMG/M
3300030741\|Ga0265459_11286112	Not Available	810	Open in IMG/M
3300031572\|Ga0318515_10179415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1132	Open in IMG/M
3300031682\|Ga0318560_10014944	All Organisms → cellular organisms → Bacteria → Proteobacteria	3440	Open in IMG/M
3300031708\|Ga0310686_116121205	Not Available	643	Open in IMG/M
3300031724\|Ga0318500_10334539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	746	Open in IMG/M
3300031744\|Ga0306918_10322910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1193	Open in IMG/M
3300031753\|Ga0307477_10245643	All Organisms → cellular organisms → Bacteria → Proteobacteria	1240	Open in IMG/M
3300031753\|Ga0307477_11051937	Not Available	532	Open in IMG/M
3300031765\|Ga0318554_10116967	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300031768\|Ga0318509_10715982	Not Available	555	Open in IMG/M
3300031770\|Ga0318521_10131755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1406	Open in IMG/M
3300031792\|Ga0318529_10402497	Not Available	637	Open in IMG/M
3300031879\|Ga0306919_10431993	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300031880\|Ga0318544_10151916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	888	Open in IMG/M
3300031912\|Ga0306921_10460384	Not Available	1481	Open in IMG/M
3300031941\|Ga0310912_10553121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	896	Open in IMG/M
3300031942\|Ga0310916_10471557	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300031945\|Ga0310913_10183196	Not Available	1458	Open in IMG/M
3300031954\|Ga0306926_11816903	Not Available	691	Open in IMG/M
3300031959\|Ga0318530_10086298	Not Available	1233	Open in IMG/M
3300032001\|Ga0306922_12149445	Not Available	540	Open in IMG/M
3300032043\|Ga0318556_10481415	Not Available	649	Open in IMG/M
3300032051\|Ga0318532_10163647	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300032054\|Ga0318570_10246408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	810	Open in IMG/M
3300032091\|Ga0318577_10413866	Not Available	644	Open in IMG/M
3300032205\|Ga0307472_100038146	All Organisms → cellular organisms → Bacteria → Proteobacteria	2870	Open in IMG/M
3300032205\|Ga0307472_100048658	All Organisms → cellular organisms → Bacteria → Proteobacteria	2624	Open in IMG/M
3300032783\|Ga0335079_10128638	Not Available	2856	Open in IMG/M
3300032805\|Ga0335078_10956313	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300033290\|Ga0318519_10491001	Not Available	739	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.52%
Host-Associated	Host-Associated	7.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.72%
Plants	Host-Associated → Plants	6.54%
Aquatic	Environmental → Aquatic	2.80%
Arthropoda	Host-Associated → Arthropoda	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.74%
Peat	Environmental → Terrestrial → Peat	2.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Sediment	Environmental → Aquatic → Sediment	0.93%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.22%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030046	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102822753	3300001867	Forest Soil	HGALRLKVPFAKTDRLLALDIEEAIQTVRLPEIQSLARSLLPSYR*
JGIcombinedJ26739_1000962231	3300002245	Forest Soil	KVPFAQTDRLLAPDIAEAAATVRRSEVQSLVAPLLPSFR*
Ga0070674_1006133823	3300005356	Miscanthus Rhizosphere	QGAYEALRLKVPFAPGDRLLALDIEASAAVLRAPEVQSLAETLLPSYR*
Ga0070714_1000223961	3300005435	Agricultural Soil	SSRLATVHGALRLKVPFAATDRLLALDIEEAATIVRHAEVQSKANSLLPSYR*
Ga0070714_1012459892	3300005435	Agricultural Soil	RTSARLQGAYEALRLKVPFAPADRLLALDIEASAAVLRAPEVQSLAETLLPSYR*
Ga0070699_1020160841	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ALRLKVPFAPGDRLLALDIEASAAVLRAPEVQSLAETLLPSYR*
Ga0073909_100056044	3300005526	Surface Soil	SARLQGAYEALRLKVPFAPGDRLLALDIEASAAVLRAPEVQSLAETLLPSYR*
Ga0070733_104497411	3300005541	Surface Soil	PQLASAHGALRLKVPFAKTDRLLALDVEEALQVARLPEVQSLARSLLPSYR*
Ga0066695_103090193	3300005553	Soil	LKVPFAQTDRLLAPDVADAAVTVRRSEVQSLVAPLLPSFR*
Ga0070716_1001916883	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AYEALRLKVPFAPADRLLALDIEASAAVLRAPEVQSLAETLLPSYR*
Ga0075014_1003923553	3300006174	Watersheds	LKTSARLARALSALRLSVPFAASDRLLATDIEEATRVLRRAEVQSLAQELLPSFR*
Ga0070712_1003792751	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LKTSSRLATVHGALRLKVPFAATDRLLALDIEEAATIVRHAEVQSQANSLLPSYR*
Ga0070765_1009501521	3300006176	Soil	SAPLAAAHSALRLTVPFATSDRLMATDIEAAAIAMRRSEVLSPAQHLLPSFR*
Ga0075434_1001372471	3300006871	Populus Rhizosphere	RAPLKTSARLSTVHSALRLKVPFAATDRLLALDIEEAAVTVRLAEVQSQANSLLPSYR*
Ga0099793_100999751	3300007258	Vadose Zone Soil	KVPFAQSDRLLAPDIADSAATVRRSEVQSLVAPLLPSFR*
Ga0126380_105360292	3300010043	Tropical Forest Soil	RLAGVHGALRLKVPFATSDRLLALDIEEAASTVRRAEVQSQASALLPSYR*
Ga0126373_109285343	3300010048	Tropical Forest Soil	SPRLARAHGALRLKVPFAKSDRLLALDIEEAIQTVRLPEVQSLARTLLPSFR*
Ga0126373_125256481	3300010048	Tropical Forest Soil	LAAAHGALRLKVPFAKSDRLLALDVEEAINTVRLPEVQSLARSLLPSYR*
Ga0126373_128598762	3300010048	Tropical Forest Soil	AGVHSALRLKVPFATSDRLLALDIEEAAITVRRAEVQSQASALLPSYR*
Ga0123356_108290082	3300010049	Termite Gut	LQAAHAALRLKVPFAASDRLLAIDIEEAATIVRHAEVQSQARALLPSFR*
Ga0126378_130270801	3300010361	Tropical Forest Soil	KTSPRLAGVHSALRLTVPFATTDRLLAADIEQAAAAVRRAEVQSQANALLPSYR*
Ga0134066_101075833	3300010364	Grasslands Soil	LQDAHSALRLKVPFAQTDRLLAPDVADAAVTVRRSEVQSLVAPLLPSFR*
Ga0126379_106183051	3300010366	Tropical Forest Soil	RLAGVHSALRLKVPFATSDRLLALDIEEAAMTVRRAEVQSQASALLPSYR*
Ga0134126_101132831	3300010396	Terrestrial Soil	KTSPRLAAAHALMRLAVPFAQSDRLLATDIEAAARTVRRDELQALARELLPSYR*
Ga0134126_101351781	3300010396	Terrestrial Soil	KTSPRLAAAHALMRLAVPFAQSDRLLATDIEAAARTVRRDEVQALARELLPSYR*
Ga0137362_101135021	3300012205	Vadose Zone Soil	LQNPHGALRLKVPFAQTDRLLAPDVADAAATVRRSEVQSLVAPLLPSFR*
Ga0137384_106799503	3300012357	Vadose Zone Soil	VPFAQSDRLLAPDIAEAALVVRRSEVQSLVSSVLPSFR*
Ga0137358_100676781	3300012582	Vadose Zone Soil	ALRLKVPFAQTDRLLAPDIADAAATVRRSEVQSLVAPLLPSFR*
Ga0137419_104805803	3300012925	Vadose Zone Soil	KVPFAQTDRLLAPDIADAAATVRRSEVQSLVAPLLPSFR*
Ga0137416_105042471	3300012927	Vadose Zone Soil	SPRLQNPHSALRLKVPFAQADRLLAPDVADAAATVRRSEVQSLVASLLPSFR*
Ga0164301_102781483	3300012960	Soil	HALMRLAVPFAQNDRLLATDIEAAARTVRRDEVQALARELLPSYR*
Ga0134087_100315123	3300012977	Grasslands Soil	RRLQDAHSALRLKVPFAQTDRLLAPDVADAAVTVRRSEVQSLVAPLLPSFR*
Ga0181526_107184511	3300014200	Bog	PLQAAYEALRLKVPFAQSDRLLALDIEEAALVMRRDDVQSLARSLLPSYR*
Ga0157379_122508061	3300014968	Switchgrass Rhizosphere	APLKTSARLQGAYEALRLKVPFAPGDRLLALDIQASAAVLRAPEVQSLAETLLPSYR*
Ga0137420_12664162	3300015054	Vadose Zone Soil	QHAHSALRLKVPFAQSDRLLAPDIADSAATVRRSEVQSLVAPLLPSFR*
Ga0182033_110533431	3300016319	Soil	PRLAAVHSALRLRVPFARSDRLLALDIEEAAIAVRRAEVQSQANMLLPSYR
Ga0182040_102237943	3300016387	Soil	VHGALRLKVPFAASDRLLALDMEEAASTVRRTEVQSQASSLLPSYR
Ga0182039_112696933	3300016422	Soil	AAHSALRLSVPFASSDRLLAPDIEAAAATLQRAEVQSLASAILPSFR
Ga0182039_114526072	3300016422	Soil	AAAHSALRLKVPFATSDRLLALDIEEAAATVRRAEVQSQANSLLPSYR
Ga0187809_102284981	3300017937	Freshwater Sediment	AGAVSALRLKVPFAATDRLLAPDIEEAALVVRRNEVQSLATALLPSFR
Ga0187778_102339084	3300017961	Tropical Peatland	AHGALRLKVPFAKSDRLLSLDIEEAIHTVRLPEVQSLARSLLPSYR
Ga0187783_109961911	3300017970	Tropical Peatland	KVPFAASDRLLAPDIAAAAATLQRAEVQSQARMLLPSFR
Ga0187781_104552091	3300017972	Tropical Peatland	RLAQAHSALRLKVPFAQSDRLLARDIEEAAVVVRRAEVQSLVSALLPSLR
Ga0187780_105738944	3300017973	Tropical Peatland	HGELRLKVPFAKSDRLLALDVEEAIHTVRLPEVQSLARSLLPSYR
Ga0187782_101829213	3300017975	Tropical Peatland	RVPFAASDRLLAPDIEEARLVVRRNEVQSLASTLLPSFR
Ga0187768_10032141	3300020150	Tropical Peatland	SPRLAAAHGALRLKVPFAKSDRLLSLDIEEAIHIVRLPEVQSLARSLLPSYR
Ga0179592_100627133	3300020199	Vadose Zone Soil	KVPFAQTDRLLAPDVADAAATVRRSEVQSLVASLLPSFR
Ga0210399_104847053	3300020581	Soil	ARLAGAHGALRLKVPFAKTDRLLALDIEEAIQTVRLPEIQSLARSLLPSYR
Ga0210395_110634302	3300020582	Soil	LAGAHGALRLKVPFAKTDRLLALDIEEAIQTVRLPEIQSLARSLLPSYR
Ga0210395_114391081	3300020582	Soil	PYEALRLKVPFAQSDRLLALDIEEAALVLRRDDVQSLANSLLPSFR
Ga0210405_113672661	3300021171	Soil	LKTSPRLAGAYSALRLNVSFAPSDRLLAPDIAEAALTVRRSEVQSLVRPLLPSFR
Ga0210397_102497881	3300021403	Soil	ALRLKVPFAQSDRLLALDIEEAALVLRRDDVQSLANSLLPSFR
Ga0213878_102330483	3300021444	Bulk Soil	FASSDRLLALDIEEAAATVRRAEVQSLARGLLPSYR
Ga0210409_104860043	3300021559	Soil	LRLKVPFAQSDRLLAPDIADAAATVRRSEVQSLVAPLLPSFR
Ga0126371_103280071	3300021560	Tropical Forest Soil	KTSPRLAAVHSALRLRVPFARSDRLLALDIEEAAITVRRAEVQSQANMLLPSYR
Ga0126371_129156061	3300021560	Tropical Forest Soil	PLSAAHGALRLSVPFAASDRLLAPDIEAAAATLRRAEVQSLVSAILPSFR
Ga0242654_101675862	3300022726	Soil	LAAVHGAMRLKVPFATSDRLLALDIQEAASTVRRAEVQSEASSLLPSYR
Ga0207685_108220361	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	PLKTSPRLAAAHGALRLKVPFATSDRLLALDIEEAATTVRRAEVQSEASSLLPSYR
Ga0207704_104258853	3300025938	Miscanthus Rhizosphere	PLRTSARLQGAYEALRLKVPFAPADRLLALDIEASAAVLRAPEVQSLAETLLPSYR
Ga0207711_104820243	3300025941	Switchgrass Rhizosphere	KVPFAPADRLLALDIEASAAVLRAPEVQSLAETLLPSYR
Ga0207702_101684891	3300026078	Corn Rhizosphere	FAATDRLLALDIEEAATIVRHAEVQSKANSLLPSYR
Ga0207641_103966153	3300026088	Switchgrass Rhizosphere	KVPFAPGDRLLALDIEASAAVLRAPEVQSLAETLLPSYR
Ga0209688_10416851	3300026305	Soil	LKTSPRLQNPHSALRLKVPFAQTDRLLAPDVADAAATVRRSEVQSLVAPLLPSFR
Ga0209268_10504903	3300026314	Soil	GAHGALRLRVPFAQSDRLLAPDIAEAALVVRRTEVQSLVSSVLPSFR
Ga0209686_10067131	3300026315	Soil	ARLAGAHGALRLRVPFAQSDRLLAPDIAEAALVVRRSEVQSLVSSVLPSFR
Ga0209473_10697203	3300026330	Soil	RVPFAQSDRLLAPDIAEAALVVRRSEVQSLVSSVLPSFR
Ga0179587_102499533	3300026557	Vadose Zone Soil	LKVPFAQTDRLLAPDIADAAATVRRSEVQSLVAPLLPSFR
Ga0209118_10637662	3300027674	Forest Soil	SALRLKVPFAQTDRLLAPDIADAAATVRRSEVQSLVAPLLPSFR
Ga0209380_105402251	3300027889	Soil	APSDRLLALDIEAAALTVRLAEVQSLANELVPSRR
Ga0209168_105943121	3300027986	Surface Soil	HALMRLAVPFAQSDRLLATDIEAAARTVRRDEVQALARELLPSYR
Ga0222749_104283363	3300029636	Soil	LRLRVPFAPTDRLLAPDIADAAATVRRSEVQSLAAPVLPSFR
Ga0311371_123842312	3300029951	Palsa	SELRLKVPFAATDRLLAPDIEAAAGTVRHPQVLSLASPLLPSFR
Ga0302305_11262521	3300030046	Palsa	VPFAADDRLLALDIAAAALVLRRPDVQSLADSLLPSFR
Ga0210271_107119252	3300030545	Soil	FAQSDRLLALDIEAAALTVRLAEVQSLANELVPSRR
Ga0302309_105551462	3300030687	Palsa	RAPLKTSAPLMRAYGALRLTVPFAADDRLLALDIAAAALVLRRPDVQSLADSLLPSFR
Ga0307482_11670881	3300030730	Hardwood Forest Soil	KTSPRLAAVHGAVRLKVPFATSDRLLALDFEEAAATMRRVEVQSQANSLLPSHR
Ga0265459_112861121	3300030741	Soil	MQRAYGALRLQVPFAQSDRLLALDIEAAALTVRLAEVQSLANELVPSRR
Ga0318515_101794153	3300031572	Soil	RVPFAPSDRLLALDIEEAAVTVRRTEVQSQARMLLPSHR
Ga0318560_100149445	3300031682	Soil	KTSPRLAAVHSALRLRVPFARSDRLLALDIEEAANTVRRAEVQSQANVLLPSYR
Ga0310686_1161212051	3300031708	Soil	RLQVPFAPSDRLLALDIEAAALTVRLAEVQSLANELVPSRR
Ga0318500_103345393	3300031724	Soil	LKTSPRLAAVHSALRLRVPFARSDRLLALDIEEAAIAVRRAEVQSQANMLLPSYR
Ga0307468_1002253261	3300031740	Hardwood Forest Soil	QRLQAAHGVLRLQVPFAAADRLLASDIEAAGLAVRRDEVQSLARALLPSYR
Ga0306918_103229103	3300031744	Soil	APHKTSPKLGVVHGALRLKVPFAASDRLLALDLEEAASTVRRAEVQSQASSLLPSYR
Ga0307477_102456431	3300031753	Hardwood Forest Soil	GAHGALRLKVPFAKTDRLLALDIEEAIQTVRLPEIQSLARSLLPSYR
Ga0307477_110519371	3300031753	Hardwood Forest Soil	LKVPFAKSDRLLALDIEAAIHTVRLPEVQSLARALLPSFR
Ga0318554_101169671	3300031765	Soil	RLRVPFARSDRLLALDIEEAANTVRRAEVQSQANVLLPSYR
Ga0318509_107159822	3300031768	Soil	VHAALRLKVPFAASDRLLALDMEEAASTVRRTEVQSQASSLLPSYR
Ga0318521_101317553	3300031770	Soil	ALRLRVPFAPSDRLLALDIEEAAVTVRRTEVQSQARMLLPSHR
Ga0318529_104024972	3300031792	Soil	RTSPRLAAAHSALRLKVPFATSDRLLALDIEEAAATVRRAEVQSQANSLLPSYR
Ga0306919_104319931	3300031879	Soil	LRLRVPFAPSDRLLALDIEEAAVTVRRTEVQSQARMLLPSYR
Ga0318544_101519161	3300031880	Soil	NKTSAKLGAVHAALRLKVPFAASDRLLALDMEEAASTVRRTEVQSQASSLLPSYR
Ga0306921_104603843	3300031912	Soil	PLKTSPRLAAAHGALRLKVPFATSDRLLALDIEEAATAVRRTEVQSQASSLLPSYR
Ga0310912_105531211	3300031941	Soil	GVVHGALRLKVPFAASDRLLALDLEEAASTVRRAEVQSQASSLLPSYR
Ga0310916_104715571	3300031942	Soil	GALRLKVPFATSDRLLALDIEEAASAIRRAEVQSQASSLLPSYR
Ga0310913_101831961	3300031945	Soil	RLAAVHSALRLRVPFARSDRLLALDIEEAASTVRRAEVQSQANVLLPSYR
Ga0306926_118169031	3300031954	Soil	PLRTSPRLASAHSALRLRVPFAASDRLLARDIAEAAAVMRRAEVQSQARPLLPSFR
Ga0318530_100862984	3300031959	Soil	LRVPFARSDRLLALDIEEAANTVRRAEVQSQANVLLPSYR
Ga0306922_121494452	3300032001	Soil	VPFAASDRLLALDMEEAASTVRRTEVQSQASSLLPSYR
Ga0318556_104814152	3300032043	Soil	LKTSPRLAAAHGALRLKVPFATSDRLLALDIEEAASAIRRAEVQSQASSLLPSYR
Ga0318532_101636473	3300032051	Soil	LKTSPRLAAVHSALRLRVPFARSDRLLALDIEEAANTVRRAEVQSQANVLLPSYR
Ga0318570_102464081	3300032054	Soil	VHSALRLRVPFARSDRLLALDIEEAAIAVRRAEVQSQANMLLPSYR
Ga0318577_104138662	3300032091	Soil	ALRLKVPFAASDRLLALDIEAAALTVRLAEVQSLAHELVPSRR
Ga0307472_1000381464	3300032205	Hardwood Forest Soil	LRAPLKTSPRLATVHGALRVKVPFATSDRLLALDIQEAAATAGRAEVQSEANSLLPSYR
Ga0307472_1000486581	3300032205	Hardwood Forest Soil	PRLAAAHGALRLKVPFATSDRLLALDIEEAATTVRRAEVQSEASSLLPSYR
Ga0335079_101286384	3300032783	Soil	RAPLKTSPKLAAAHGALRLKVPFAKSDRLLALDIDAAMNTVRLPEVQSLARTLLPSFR
Ga0335078_109563131	3300032805	Soil	FASSDRLLALDIEAAAAVLQRADVQSLTLGLLPSSR
Ga0318519_104910011	3300033290	Soil	APLKTSPRLAGVHSALRLSVPFAASDRLLALDIEEAAVIVRRAEVQSQAHALLPSYR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092622

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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