Metagenome / Metatranscriptome Family F092672

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092672
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	107 residues
Representative Sequence	WKARLPELSGLTNLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPHGLDLKPIDMALACRNEKCTAEDVFALHTDLNRQCESAVSYISARP
Number of Associated Samples	104
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	95.33 %
% of genes from short scaffolds (< 2000 bps)	94.39 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.280 % of family members)
Environment Ontology (ENVO)	Unclassified (41.121 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (27.103 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.08% β-sheet: 0.00% Coil/Unstructured: 46.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
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SCOP family	SCOP domain	Representative PDB	TM-score
a.24.16.1: Kanamycin nucleotidyltransferase (KNTase), C-terminal domain	d6un8a2	6un8	0.6098
a.285.1.1: MtlR-like	d3brja1	3brj	0.59119
a.24.16.0: automated matches	d1wola_	1wol	0.5819
a.24.16.4: Glutamine synthase adenylyltransferase GlnE, domain 2	d1v4aa1	1v4a	0.57786
a.24.16.2: Family 1 bi-partite nucleotidyltransferase subunit	d1wtya_	1wty	0.57602

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00701	DHDPS	7.48
PF05721	PhyH	1.87
PF01694	Rhomboid	1.87
PF00248	Aldo_ket_red	1.87
PF04909	Amidohydro_2	1.87
PF02518	HATPase_c	1.87
PF00291	PALP	1.87
PF13432	TPR_16	0.93
PF02446	Glyco_hydro_77	0.93
PF00596	Aldolase_II	0.93
PF14487	DarT	0.93
PF12728	HTH_17	0.93
PF02661	Fic	0.93
PF13744	HTH_37	0.93
PF01862	PvlArgDC	0.93
PF08269	dCache_2	0.93
PF02353	CMAS	0.93
PF01370	Epimerase	0.93
PF16804	DUF5071	0.93
PF01844	HNH	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	14.95
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	1.87
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.87
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	0.93
COG1945	Pyruvoyl-dependent arginine decarboxylase	Amino acid transport and metabolism [E]	0.93
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.93
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.93
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	91.59 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	91.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	88.79 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.93 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	88.79 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.93 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	88.79 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	0.93 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	88.79 %
Geobacteraceae bacterium GWB2_52_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium GWB2_52_12	0.93 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0575044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	660	Open in IMG/M
3300000787\|JGI11643J11755_11629247	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300000890\|JGI11643J12802_10660879	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300002122\|C687J26623_10210677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300002124\|C687J26631_10112661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	919	Open in IMG/M
3300004070\|Ga0055488_10100685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300004778\|Ga0062383_10561123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300005169\|Ga0066810_10145070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300005295\|Ga0065707_10135367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1850	Open in IMG/M
3300005336\|Ga0070680_100697439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	873	Open in IMG/M
3300005457\|Ga0070662_101599303	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300005618\|Ga0068864_102299903	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300005981\|Ga0081538_10285668	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300006169\|Ga0082029_1776695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1262	Open in IMG/M
3300006846\|Ga0075430_100845348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300006853\|Ga0075420_101178785	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300006854\|Ga0075425_100297549	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1857	Open in IMG/M
3300006904\|Ga0075424_100550797	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300009012\|Ga0066710_102952086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium GWB2_52_12	665	Open in IMG/M
3300009078\|Ga0105106_10297893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1168	Open in IMG/M
3300009087\|Ga0105107_10602267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	765	Open in IMG/M
3300009091\|Ga0102851_13214792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300009100\|Ga0075418_12788232	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300009153\|Ga0105094_10625453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300009157\|Ga0105092_10201006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1113	Open in IMG/M
3300009167\|Ga0113563_13930382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300010373\|Ga0134128_12587514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300010396\|Ga0134126_12748648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300010399\|Ga0134127_11140840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	844	Open in IMG/M
3300010400\|Ga0134122_11833751	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300010401\|Ga0134121_11527194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300010403\|Ga0134123_13080852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300011445\|Ga0137427_10334859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300012040\|Ga0137461_1221328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300012041\|Ga0137430_1090421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	859	Open in IMG/M
3300012205\|Ga0137362_11054488	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300012210\|Ga0137378_11660480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300012226\|Ga0137447_1133920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300012498\|Ga0157345_1006696	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	924	Open in IMG/M
3300012509\|Ga0157334_1010954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	856	Open in IMG/M
3300012918\|Ga0137396_10876776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300012925\|Ga0137419_11003479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300012960\|Ga0164301_11220412	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300012976\|Ga0134076_10504336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300012986\|Ga0164304_11519323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300013308\|Ga0157375_11692587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300014269\|Ga0075302_1179817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300014873\|Ga0180066_1004069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2219	Open in IMG/M
3300015254\|Ga0180089_1017637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1288	Open in IMG/M
3300015264\|Ga0137403_11293013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300015373\|Ga0132257_103502627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300018076\|Ga0184609_10093547	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1343	Open in IMG/M
3300018077\|Ga0184633_10073434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1756	Open in IMG/M
3300018081\|Ga0184625_10471678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300018082\|Ga0184639_10035622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2549	Open in IMG/M
3300018422\|Ga0190265_10369182	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1526	Open in IMG/M
3300018422\|Ga0190265_13042462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300018476\|Ga0190274_11599278	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	744	Open in IMG/M
3300020064\|Ga0180107_1122711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300020197\|Ga0194128_10162966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1251	Open in IMG/M
3300021078\|Ga0210381_10091276	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	977	Open in IMG/M
3300021090\|Ga0210377_10523038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	681	Open in IMG/M
3300021344\|Ga0193719_10321966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300025146\|Ga0209322_10401596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300025160\|Ga0209109_10016832	All Organisms → cellular organisms → Bacteria	3933	Open in IMG/M
3300025165\|Ga0209108_10033263	All Organisms → cellular organisms → Bacteria	2899	Open in IMG/M
3300025167\|Ga0209642_10212720	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1112	Open in IMG/M
3300025313\|Ga0209431_10542053	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	880	Open in IMG/M
3300025313\|Ga0209431_10745514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300025324\|Ga0209640_10770784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	760	Open in IMG/M
3300025325\|Ga0209341_10115640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2262	Open in IMG/M
3300025326\|Ga0209342_10890279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	690	Open in IMG/M
3300025907\|Ga0207645_10789310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300025917\|Ga0207660_10624152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	878	Open in IMG/M
3300025933\|Ga0207706_10665858	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	891	Open in IMG/M
3300025937\|Ga0207669_10519128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	956	Open in IMG/M
3300025953\|Ga0210068_1072641	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300025985\|Ga0210117_1074365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300026051\|Ga0208911_1017791	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300026285\|Ga0209438_1063304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1216	Open in IMG/M
3300026485\|Ga0256805_1030750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300027513\|Ga0208685_1121526	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300027722\|Ga0209819_10184538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	728	Open in IMG/M
3300027819\|Ga0209514_10329234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	686	Open in IMG/M
3300027840\|Ga0209683_10265180	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	790	Open in IMG/M
3300027843\|Ga0209798_10412737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300027875\|Ga0209283_10214525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300027876\|Ga0209974_10222200	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300027909\|Ga0209382_12116968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300027979\|Ga0209705_10423446	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	660	Open in IMG/M
3300030619\|Ga0268386_10431134	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	919	Open in IMG/M
3300031198\|Ga0307500_10107807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	755	Open in IMG/M
3300031547\|Ga0310887_10635744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300031547\|Ga0310887_10728401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300031716\|Ga0310813_10194477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1659	Open in IMG/M
3300031720\|Ga0307469_11615078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300031949\|Ga0214473_10075552	All Organisms → cellular organisms → Bacteria	3942	Open in IMG/M
3300032005\|Ga0307411_12296400	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300032012\|Ga0310902_10258430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1053	Open in IMG/M
3300032075\|Ga0310890_10744821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	771	Open in IMG/M
3300032157\|Ga0315912_10746958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	779	Open in IMG/M
3300032174\|Ga0307470_10775561	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	740	Open in IMG/M
3300032783\|Ga0335079_10787553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	986	Open in IMG/M
3300034147\|Ga0364925_0271972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300034150\|Ga0364933_115692	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300034417\|Ga0364941_148868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300034894\|Ga0373916_0079724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.18%
Host-Associated	Host-Associated	15.89%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.21%
Aquatic	Environmental → Aquatic	28.97%
Plants	Host-Associated → Plants	15.89%
Bioremediation	Engineered → Bioremediation	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.40%
Freshwater	Environmental → Aquatic → Freshwater	15.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.21%
Sediment	Environmental → Aquatic → Sediment	10.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.74%
Marine	Environmental → Aquatic → Marine	2.80%
Floodplain	Environmental → Terrestrial → Floodplain	2.80%
Roots	Host-Associated → Plants → Roots	0.93%
Metal	Engineered → Bioremediation → Metal	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.28%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.80%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.28%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.41%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.93%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.28%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	7.48%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.80%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020064	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025146	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 1	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025953	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025985	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026051	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026485	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F6	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034894	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.2	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_05750442	2228664021	Soil	RGILYAARLIYTWDNLAVDSNDRAVAYLHQVQPEGVDLKPIDMALACRNEKCSVEDVFALGTDFNRQYQSAVSYISGRP
JGI11643J11755_116292471	3300000787	Soil	VPLLRGVKAIFRRPSKGEIHEEQLQSIERSWKSRLPELSQLMRLEAKDRKPYIRGILYAARLIYTWDNLAVDSNDRAVAYLHQVQPEGVDLKPIDMALACRNEKCSVEDVFALGTDFNRQYQSAVSYISGRP*
JGI11643J12802_106608791	3300000890	Soil	LRGVKAIFRRPSKGEIHEEQLQSIERSWKSRLPELSQLMRLEAKDRKPYIRGILYAARLIYTWDNLAVDSNDRAVAYLHQVQPEGVDLKPIDMALACRNEKCSVEDVFALGTDFNRQYQSAVSYISGRP*
C687J26623_102106771	3300002122	Soil	LYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLKPIDMALACRNKQCTAEDVFALRVDLSRQYESAISYISVNRS*
C687J26631_101126611	3300002124	Soil	KDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLKPIDMALACRNKQCTAEDVFALRVDLSRQYESAISYISVNRS*
Ga0055488_101006852	3300004070	Natural And Restored Wetlands	VIDRLDLLDHGVALLYGIKPSLRRPTKDEIHREQLQSIERSWKPRLPELSGLTSLEPKDRKPYIRAILYAARLIYTWDNLVVGSNDSAVEYLHQVRPAGLDLQPIDMALECRKGNCDAEDVLRLGADLNRQCESALRYVLARP*
Ga0062383_105611232	3300004778	Wetland Sediment	WKPRLPELSGLTALTPENRKPYIRAILYAARLIFSWDNLAMESNDRAVAYLHQVQPPGLDLKPIDMALACRQENCTAEDVFVLGTDLCRQCDSAVSYISNHA*
Ga0066810_101450701	3300005169	Soil	LIYTWDNLVVGSNDSAVEYLHQVRSEGLDLKAIDMALMCRRGECSAEDVMRLGSDLNRHCDSAMSYVLGRP*
Ga0065707_101353673	3300005295	Switchgrass Rhizosphere	PAFRRPNKDEIHQEQLQSIERSWKSRLPELGRLTNLEPRNRKPYIRAILYAARLIYTWDTLAVGSNDRAVEYLHQVQPPGLDLKPIDMALACRNEKCTAEDVFALHTNLIGQCESAVRYISANR*
Ga0070680_1006974391	3300005336	Corn Rhizosphere	LTTLEPKDRKPYIRAILYAARLIYTWDKLAVDSNDCAVEYLHQVQPSRLDLKPIDMALACRNEKYTAEDVFALRTDLIRQCQSAVRYVSVHGN*
Ga0070662_1015993031	3300005457	Corn Rhizosphere	HQALRESIEKSWQPRIPELQALTRLEAKDRKPYVRAILYAARLIFTWDKLAVDSNDRAVEYLHQVQPPGLDLEPIDRALACRRERCSVEDVFALRTDLNRQVQSALSYISKRT*
Ga0068864_1022999031	3300005618	Switchgrass Rhizosphere	KSWKPRLPELNRLTTLEPKDRKPYIRAILYAARLIYTWDKLAVDSNDCAVEYLHQVQPSRLDLKPIDMALACRNEKYTAEDVFALRTDLIRQCQSAVRYVSVHGN*
Ga0081538_102856682	3300005981	Tabebuia Heterophylla Rhizosphere	PLLRGVKPGFRRPTKEEIHQEQLQSIERSWKSRLPELTRLTALKAKDCKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLGPIDMALACRKGICTAEDVFAVRTDLDAQCQSALSYIAARS*
Ga0082029_17766953	3300006169	Termite Nest	RPTQVEVHRALRESIEKSWLPRVPELQALTRLEATDREPCVRAILYAARLIFTWDKLAVDSNDRAVEYLHRVQPPGLELEPIDGALACRREQCSVEDVFALRPDLNRQAQSALRYISKRS
Ga0075430_1008453481	3300006846	Populus Rhizosphere	ANFTRPAQVEVHQALRESIEKSWQSRIPELQALTRLDAKDRKPYVRAILYAARLIFTWDKLAVDSNDRAVEYLHQIQPPGLDLEPIDRALACRQDRCTAEDVFALGTDLKGQVHSAVSYISKRT*
Ga0075420_1011787852	3300006853	Populus Rhizosphere	LQSIEKSWRSRLPELNRLTRLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHEVQPSGLALKPIDMALACRNGKCAAEDVFGLPIDLNRQCEAALNYISDDRP*
Ga0075425_1002975491	3300006854	Populus Rhizosphere	SRLKTLEPKDRKPYIRAILYAARLIYTWDNLTVDSNDRAVEYLHQVQPSGLDLKPIDMALACRNGKCVAEDVFALRTDLIGECESAVGYISPGDKLV*
Ga0075424_1005507971	3300006904	Populus Rhizosphere	RKSYIRAILYAARLIYTWDNLTVDSNDRAVEYLHQVQPSGLDLKPIDMALACRNGKCVAEDVFALRTDLIGECESAVGYISPGDKLV*
Ga0066710_1029520862	3300009012	Grasslands Soil	RSSKPELPELSRLKTLQPTDRQPYTRAILSAPRRIYTWDNLTVDSNDRAVEYLHQVQPPGLDLEPIDMALACRNGKCKAEEVFAHRADLERQCESATAYIRGLP
Ga0105106_102978932	3300009078	Freshwater Sediment	YGIKPSLRRPTKDEIHREQLQSVERSWKPRLPELSGLTSLEPKDRKPYIRAILYAARLIYTWDNLVVGSNDSAVEYLHQVRPDGLDLQPIEMALACRKGNCEAEDVLRLGADLNRQCESALRYVLGRP*
Ga0105107_106022672	3300009087	Freshwater Sediment	ARLIYTWDNLVVGSNDSAVEYLHQVRPDGLDLRPIDMALSCRRGECSAEDVMRVSAYLNRQCESALRYVLGRP*
Ga0102851_132147921	3300009091	Freshwater Wetlands	LPVIDRLDLLDHGVALLYGIKPSLRRPTKDEIHREQLQSIERSWKPRLPELTGLSSLEPKDRKPYIRAILYAARLIYTWDNLVVGSNDRAVEYLHQVRPVGLDLKPIDMALACRSGNCDAEDALRLGADLNRQYESAMRYVLGHP*
Ga0075418_127882321	3300009100	Populus Rhizosphere	ELSQLMRLEAKDRKPYIRGILYAARLIYTWDNLAVDSNDRAVEYLHQVQPEGVDLKPIDMALACRNEKCSVEDVFALGTDFNRQYQSAVSYISGRP*
Ga0105094_106254532	3300009153	Freshwater Sediment	RKPYIRAILYAARLIYTWDNLTVDSNDRAVEYLHQVQPPGLDLKPIDRALACRNEECTAEEVFALHTDLNRQCESAIRYVSTGS*
Ga0105092_102010061	3300009157	Freshwater Sediment	SKEEIHQEQLQSIERSWRSRLPELNSLTTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVRPARLDLKPIDMALACRNDMCNAEDVFALRTDLNGQYDSSVSYISTRP*
Ga0113563_139303821	3300009167	Freshwater Wetlands	RPSKDEIHREQLQSVERSWKPKLPELTRLKSLGPKDRKPYIRAILYAARLIYTWDNLVVGSNDRAVEYLHQVRPVGLDIKPIDMALACRSGNCDAEDALRLGADLNRQYESAMRYVLGHP
Ga0134128_125875142	3300010373	Terrestrial Soil	IRAILYAARLIYTWDKLAVDSNDCAVEYLHQVQPSRLDLKPIDMALAYRNEKYTAEDVFALRTDLIRQCQSAVRYVSVHGN*
Ga0134126_127486481	3300010396	Terrestrial Soil	PVIDRLDLLDHGVALLDGIRPAFRRPSADEIHLEQLQSIEKSWKPRLPELSSLTALEPKDRKPYIRAVLYAARLIYTWDKLAVASNDRAVEYLHEVRPAGLELAPIDRALACRKGECSAEEVFALRADLQRQCECALRYIRAR*
Ga0134127_111408401	3300010399	Terrestrial Soil	KDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALHTDFKRQCESAISYISVNRS*
Ga0134122_118337511	3300010400	Terrestrial Soil	ESIERSWKSRLPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALHTDFKRQCESAISYISVNRS*
Ga0134121_115271941	3300010401	Terrestrial Soil	PKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALHTDFKRQCESAISYISVNRS*
Ga0134123_130808522	3300010403	Terrestrial Soil	RAILYAARLIYTWDNLEVGSNDRAVEYLHQVQPPGLDLKAIDLALACRNGRCTAEEVFALATDLHRQCEIAVRYISRRP*
Ga0137427_103348592	3300011445	Soil	AVLYAARLIYTWDNLVVGSNDNAVEYLHKVRPIGLDLKPIDMALACRNGNCDAEAVLRLGSDLDRQCESAMRYILGHP*
Ga0137461_12213281	3300012040	Soil	GVSLLKGHKPEFLRPTKQEIRDELLRSIEKSWKPRLPELNALTELAPANRKPYIRAILYAARLIFSWDNLAMESNDRAVEYLHQVQPPDLDLKPIDMALACRQENCTADDVFALHTDLIRQCESAVSYISARP*
Ga0137430_10904212	3300012041	Soil	HGIKPPLRRPSREEIHQEQLQSIERSWRPRLPELNRLTSLEPKDRKPYIRAILYAARLIYTWDNLMVGSNDSAVEYLHRVRPDGLDLRPIDMALACRKGNCEPEDVLRLGADLNRQCESALRYILARP*
Ga0137362_110544881	3300012205	Vadose Zone Soil	LDSIERSWKSRLPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLTVDSNDRAVEYLHQVQPSGLDLKPIDMALACRNGKCVAEDVFALRTDLIGECESAVGYISQGDKLV*
Ga0137378_116604801	3300012210	Vadose Zone Soil	GVPLLRGIKPTFRRPSKDEIHHEQRENIERSWKSRLPEFSSLTRLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPSGLDLKPIDMALACRNGKCVAEDVFALRTDLIGECESAVGYISQGDKLV*
Ga0137447_11339201	3300012226	Soil	QHKPYIRAILYAARLIYTWDNLLVASNDCAVEYLRRVRPARLDLNAIEMALACRNEQRSVDEVFALRCDLGRLSDSALSYIARNRSE*
Ga0157345_10066962	3300012498	Arabidopsis Rhizosphere	LPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALQTDFKRQCESAISYISVNRS*
Ga0157334_10109542	3300012509	Soil	SWKSRLPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALHTDFKRQCESAISYISVNRS*
Ga0137396_108767761	3300012918	Vadose Zone Soil	NEIHQEQLDSIERSWKSRLPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLTVDSNDRAVEYLHQVQPSGLDLKPIDMALACRNGKCVAEDVFALRTDLIGECESAVGYILQGDKLV*
Ga0137419_110034791	3300012925	Vadose Zone Soil	HGVPLLHAFKPTFRRPTKNEIHQEQLDSIERSWKSRLPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLTVDSNDRAVEYLHQVQPPGLDLEPIDMALACRNGKCVAEDVFALRTDLIGECESAVGYISQGDKLV*
Ga0164301_112204122	3300012960	Soil	LESIERSWKSRLPELSRLHTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALHTDFKRQCESAIGYISVNRS*
Ga0134076_105043361	3300012976	Grasslands Soil	AARLIYTWDNLAVDSNDRAVEYLHQVQPHGLDLKPIDMALACRNEKCTAEDVFALHTDLNRQCESAVSYISARP*
Ga0164304_115193231	3300012986	Soil	PELSRLKTLESKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIGMALACLNEKCTAEEVFALHTDFKRQCESAISYISVNRS*
Ga0157375_116925871	3300013308	Miscanthus Rhizosphere	KHEIHQEQLESIERSWKSRLPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALHTDFKRQCESAISDISVNHS*
Ga0075302_11798171	3300014269	Natural And Restored Wetlands	VIDRLDLLDHGVSLLHGIKADLRRPSKNEIRQALRESIAKSWQPKLPELSSLKSLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVDYLHQVQPPGLDLKPIDMALACRQEKSTAEEVFSLHTDLTRQCESAVSYISAGR*
Ga0180066_10040695	3300014873	Soil	ERSWKSRLPELSRLTTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAIEYLHQVQPPGLDLKPIDMALACRNEKCTAEDVFALQVDLKRQCESAVSYISVNRS*
Ga0180089_10176372	3300015254	Soil	FRRPTKDEIHQEQLQSIERSWKSRLPELRRLTTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAIEYLHQVQPPGLDLKPIDMALACRNEKCTAEDVFALQVDLNRQCESAIRYISVNRS*
Ga0137403_112930132	3300015264	Vadose Zone Soil	WKARLPELSGLTNLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPHGLDLKPIDMALACRNEKCTAEDVFALHTDLNRQCESAVSYISARP*
Ga0132257_1035026271	3300015373	Arabidopsis Rhizosphere	NLRRPSKDEIHQEQLQSIERSWKPRLPELSRLKNLEAKDRKPYIRAILYAARLIYTWDNLLVGSNDAAVQYLHQVRPDGLDLKPIDLALACRQGNCSAEEVLSLATDLNRQCESAMFYVMGRR*
Ga0184609_100935472	3300018076	Groundwater Sediment	KDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLKPIDMALVCRNEKCTAEEVFALRTDFNRQCESAISYISTRP
Ga0184633_100734342	3300018077	Groundwater Sediment	MPVTKTDAAHLIYTWGNLAVDFNDRAVEYLHQVQPPGLDLKPIDMALACRQEKFKAEDVFALRADFNCQCESAVSYISARP
Ga0184625_104716782	3300018081	Groundwater Sediment	VPLLHGVKPSFRRPTKHEIHQEQLESIERSWKSRLPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALHTDFKAQCESAIGYISVNRS
Ga0184639_100356221	3300018082	Groundwater Sediment	QSIERSWKSRLPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLKPIEMALACRNEQCIAEDVFALRADLNRQSESALSYILVNRS
Ga0190265_103691821	3300018422	Soil	DRLDMLDYGIPLLHGVKPTFRRPTKEEIHREQLQSIERSWKSRLPELGHLKRLEPKDRKPYIRAILYAARLIYTWDNLIVASNDRAVEYLHKVQPPGLDLRPIGMALACRNEKCTADEVFALRTNLNQQGESAIRYISTRS
Ga0190265_130424621	3300018422	Soil	DRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHKVEPSGLDLKPIDMALACRIGKCTAEDVFALRTDLNRQCESALSYISKAPTLTPR
Ga0190274_115992782	3300018476	Soil	EIHREQLLSIEKSWKPRLPELNRLTTLEPKDRKPYIRAILYAARLIYTWDKLAVDSNDCAVEYLHQVQPSRLDLKPIDMALACRNEKYTAEDVFALRTDLIRQCQSAVRYVSVHRN
Ga0180107_11227112	3300020064	Groundwater Sediment	SKDRKPYIRAILYAARLIYTWDNLVVGSNDSAVEYLHRVRPDGLDLQPIDMALACRNGNAEAEDVLRLGADLNRQCESAMRYILGYP
Ga0194128_101629661	3300020197	Freshwater Lake	NGHKPRFRRPTKQEIRDELLRSIEKSWKPRLPELNSLKELAPENRKPYIRAILYAARLIHSWDNLAMESNDRAVEYLHQVQPPGLDLKPIDMALACRHDGCTADDVFALRTDLVRQCESSVAYLGARDLT
Ga0210381_100912762	3300021078	Groundwater Sediment	QLLSIEKSWKPRLPELNRLTTLEPKDRKPYIRAILYAARLIYTWDKLAVDSNDRAVEYLHQVQPSGLDLKPIDMALACRNEKYTAEDVFALRTDLIRQCQSAVRYVSVHGN
Ga0210377_105230381	3300021090	Groundwater Sediment	EIHEEQLQSIERSWKPRLPELSRLTALEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPSGLDLKPIDMALDCRNEKCTAEEVFALQSDLDRQCESAVSYVSTRR
Ga0193719_103219662	3300021344	Soil	IERSWKSRLPELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLTVDSNDRAVEYLHQVQPSGLDLKPIDMALACRNGKCVAEDVFALRTDLIGECESAVGYISQGDKPV
Ga0209322_104015961	3300025146	Soil	GVKPSFRRPTKDEIHREQQQSIERSWKSRLPELSRLTTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLKPIDMALACRNEKCTAEDVFALRADLSRHCERAISYISVNGR
Ga0209109_100168327	3300025160	Soil	LYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLKPIDMALACRNEKCSAEDVFALHTDLKRQCESAISYISANPAEWRV
Ga0209108_100332637	3300025165	Soil	TTLEPKDRKPYIRAILYAARLIYTWDNLTVNSNDRAVEYLHQVQPPGLDLKPIDMALACRNEICTAEDVFALQVDLNRQCESAVRYISVNRS
Ga0209642_102127201	3300025167	Soil	ILYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLKPIDMALACRNEKCTAEDVFALRADLSRHCERAINYISVNGR
Ga0209431_105420533	3300025313	Soil	PELSRLTTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLKPIDMALACRNKQCTAEDVFALRVDLSRQYESAISYISVNRS
Ga0209431_107455141	3300025313	Soil	RLPELSRLTTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDLAVEYLHQVQPPGLDLKPIDMALACRKEKCSAEDVFALHTDLSGQCESAISYVSVNRR
Ga0209640_107707841	3300025324	Soil	TKDEIHQEQIQSIERSWKSRLPELSRLPKLEPKDRKPYIRAILYAARLIYTWDNLSVDSNDRAVEYLHQVQPPGLELKPVDLALACRNEICTAEDVFALHTDLNRQCESTLSYISVNRI
Ga0209341_101156405	3300025325	Soil	SRLPELSRLTTLEPKHRKPYIRAILYAARLIYTWDKLAVDSNDRAVEYLHQVQPPGLDLKLIDMALACRNEKCTAEDVFALQVDLNRQCESAVRYLSVNRG
Ga0209342_108902791	3300025326	Soil	QSIERSWKSRLPELSRLTTLEPKHRKPYIRAILYAARLIYTWDKLAVDSNDRAVEYLHQVQPPGLDLKLIDMALACRNEKCTAEDVFALQVDLNRQCESAVRYLSVNRG
Ga0207645_107893102	3300025907	Miscanthus Rhizosphere	LEAKDRKPYVRAILYAARLIFTWDKLAVDSNDCAVEYLHQVQPPGLDLEPIDRALACRRERCSVEDVFALRTDLNRQVQSALSYISKRT
Ga0207660_106241522	3300025917	Corn Rhizosphere	ELNRLTTLEPKDRKPYIRAILYAARLIYTWDKLAVDSNDCAVEYLHQVQPSRLDLKPIDMALACRNEKYTAEDVFALRTDLIRQCQSAVRYVSVHGN
Ga0207706_106658581	3300025933	Corn Rhizosphere	VRAILYAARLIFTWDKLAVDSNDRAVEYLHQVQPPGLDLEPIDRALACRRERCSVEDVFALRTDLNRQVQSALSYISKRT
Ga0207669_105191281	3300025937	Miscanthus Rhizosphere	TRLEAKDRKPYVRAILYAARLIFTWDKLAVDSNDCAVEYLHQVQPPGLDLEPIDRALACRRERCSVEDVFALRTDLNRQVQSALSYISKRT
Ga0210068_10726412	3300025953	Natural And Restored Wetlands	LQSIERSWKPRLPELSGLTSLEPKDRKPYIRAILYAARLIYTWDNLVVGSNDSAVEYLHQVRPAGLDLQPIDMALECRKGNCDAEDVLRLGADLNRQCESALRYVLARP
Ga0210117_10743651	3300025985	Natural And Restored Wetlands	GVALLAGQKPKFRRPNRDEIRSELLRSIERSWKPRLPELNGLTVLTPENRKPYIRAILYAARLIFSWDNLAMESNDRAVSYLHQVRPAGLDLKPIDMALACRQGNCPADDVFALRTDLCRQCESALSYISNHA
Ga0208911_10177911	3300026051	Natural And Restored Wetlands	KPYIRAILYAARLIYTWDNLKVNSNDRAVAYLHDVRPDGLDLKPIDMALDCRDGKCTAEQVFALGTDLNRQCEAALIYLGSAALK
Ga0209438_10633041	3300026285	Grasslands Soil	RLPELSRLTTLEPKDRKPYIRAILYAARLIYTWDNLVVDSNDRAVEYLHQVQPPGLDLKPIDMALACRNGICTAEDVFSLRADLDRQCESAISYISVNRG
Ga0256805_10307501	3300026485	Sediment	VPVIDRLDLLDHGVALLHGIKPSLGRPSKVEIHQEQLQSIERSWKPRLPELNRLTNLEPKDRKPYIRAILYAARLIYTWDNLVVGSNDSAVEYLHQVRPEGLDLEPIDMALACRQEKCTADDVFNLHTDLNRQCEWAVKYISNNR
Ga0208685_11215262	3300027513	Soil	LLHGIKPSLRRPSKDEIHQEQLQSIERSWNSRLPELSRLTSLEPKDRKPYIRAILYAARLIYTWDNLVVGSNDSAVEYLHRVRPDGLHLQPIDMALACRSGNAEAEDVLRLGADLNRQCESAMRYILGHP
Ga0209819_101845382	3300027722	Freshwater Sediment	SKEEIHQEQLQSIERSWRSRLPELNSLTTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVRPARLDLKPIDMALACRNDMCNAEDVFALRTDLNGQYDSSVSYISTRP
Ga0209514_103292342	3300027819	Groundwater	KPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGFDLKPIDMALACRNDKCTAEDVFALQVDLNRQCESAVSYISVNRS
Ga0209683_102651801	3300027840	Wetland Sediment	VIDRVDLLDHGVALLHGIKPSLRRPTKEEIHQEQLQSIERSWKPRLPELSGLTNLDLKDRKPYIRAILYAARLIYTWDNLTVGSNDSAVAYLHSAKPAGLDLVPIDRALLCRKGGCSADEVFRLGTDLMRQCDSALRYIAAQR
Ga0209798_104127371	3300027843	Wetland Sediment	IRNELLRSIDRSWKPRLPELSGLTALTPENRKPYIRAILYAARLIFSWDNLAMESNDRAVAYLHQVQPPGLDLKPIDMALACRQENCTAEDVFVLGTDLCRQCDSAVSYISNHA
Ga0209283_102145252	3300027875	Vadose Zone Soil	PYIRAILYAARLIYTWDSLAVDSNDRAVDYLHQVQPPGLDLKPIDMALACRQEKCTAEEVFALRTDLNRQRESAVSYISARH
Ga0209974_102222001	3300027876	Arabidopsis Thaliana Rhizosphere	QPRIPELQALTRLEAKDRKPYVRAILYAARLIFTWDKLVVDSNDRAVEYLHQVQPPGLELAPIDRALACRRDQCSVEEVFALRADLNRQVQSALSYISKRT
Ga0209382_121169682	3300027909	Populus Rhizosphere	RGVKPIFRRPSKGEIHEEQLQSIERSWKSRLPELSQLMRLEAKDRKPYIRGILYAARLIYTWDNLAVDSNDRAVEYLHQVQPEGVDLKPIDMALACRNEKCSVEDVFALGTDFNRQYQSAVSYISGRPM
Ga0209705_104234462	3300027979	Freshwater Sediment	IRAILYAARLIYTWDNLVVGSNDSAVEYLHQVRPDGLDLQPIEMALACRKGNCEAEDVLRLGADLNRQCESALRYVLGRP
Ga0268386_104311341	3300030619	Soil	IHRALEESIENSWKPRIAELQGLTRLEASQRKPYVRAILYAARLIYTWDKLVVNSNDEAVHYLHQVRPRGLDLRAIDAALACRRGQCTAEDVLHLRTDLERQLQAAAAYIAEQR
Ga0307500_101078072	3300031198	Soil	PDLSRLKTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALHTDFKRQCESAIGYISVNRS
Ga0310887_106357442	3300031547	Soil	LDLLDHGVALLHGIKPPLRRPSKQEIHHEQLQSIERSWKPRLPELNRLTSLEPKDRKPYIRAILYAARLIYTWDNLVVGSNDSAVEYLHQVRPEGLDLKAIDMALMCRKGECSAEDVMRLGSDLNRHCDSAMSYVLGRP
Ga0310887_107284011	3300031547	Soil	GDHIADFPRPTRVEVHQALRESIEKSWQPRIPELQALTRLEAKDRKPYVRAILYAARLIFTWDKLAVDSNDRAVEYLHQVQPPGLDLEPIDRALACRRERCSVEDVFALRTDLNRQVQSALSYISKRS
Ga0310813_101944774	3300031716	Soil	RKPYIRAILYAARLIYTWDKLAVASNDRAVEYLHEVQPAELDLAPIDRALACRKGECFAEDVFALRADLMGQCEGALRYIHAR
Ga0307469_116150782	3300031720	Hardwood Forest Soil	LSRLKTLEPKDRKSYIRAILYAARLIYTWDNLTVDSNDRAVEYLHQVQPSGLDLKPIDMALACRNGKCVAEDVFALRTDLIGECESAVGYLSQGDKLV
Ga0214473_100755524	3300031949	Soil	VPLLKGVKPSFRRPTKDEIHQEQIQSIERSWKSRLPELSRLTTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHQVQPPGLDLKPIDMALACRNEKCTAEDVFALRVDLSRQYESAISYISVNRS
Ga0307411_122964002	3300032005	Rhizosphere	EAKDRKHYVRAILYAARLIFTWDKLAVDSNDRAVEYLHQVQPPGLDLKPIDMALACRQDQCTAEEVFTLRTDLNRQVQSALSYISKRT
Ga0310902_102584302	3300032012	Soil	PYIRAILYAARLVYSWDNLAMDSNDRAVEYLHQIEPAGLDLKPIDMALACRQAKCSAEDVFNLQTDLNRQCESAVKYISKRV
Ga0310890_107448211	3300032075	Soil	ILYAARLVYSWDNLAMDSNDRAVEYLHQIEPAGLDLKPIDMALACRQAKCSAEDVFNLQTDLNRQCESAVKYISKRV
Ga0315912_107469581	3300032157	Soil	PELNRLTSLEPKDRKPYIRAILYAARLIYTWDNLMVGSNDSAVEYLHRVRPDGLDLRPIDMALACRKGNCEPEDVLRLGADLNRQCESALRYILARP
Ga0307470_107755611	3300032174	Hardwood Forest Soil	ELSRLKTLEPKDRKPYIRAILYAARLIYTWDNLAVDSNDRAVEYLHHIQPPGLDLEPIAMALACRNEKCTAEEVFALHTDFKRQCESAISYISVNRS
Ga0335079_107875532	3300032783	Soil	PGLNALTELTPENRKPYIRAILYAARLIFSWDNLAMDSNDRAVEYLHQVQPPGLDLKPIDVALACRQEKCTADDVFALHTDLFRQCDSAVSYILSKH
Ga0364925_0271972_2_361	3300034147	Sediment	PTKQEIHREQLQSIERSWKPRLPELSPLTSLEPKDRKPYIRAVLYAARLIYTWDNLVVGSNDNAVEYLHQVRPIGLDLKPIDMALACRNGNCDAEAVLRLGSDLDRQCESAMRYILGHP
Ga0364933_115692_340_684	3300034150	Sediment	QEQLLSIEKSWKPRLPELSRLTTLEPKDRKPYIRAILYAARLIYTWDNIAVDSNDRAVDYLHQVQPSGLDLKPIDMALACRNEKCTAEDVFALGTDLIRQCQSAIRYLSVTETE
Ga0364941_148868_3_290	3300034417	Sediment	RLTTLEPKDRKPYIRAILYAARLIYTWDNIAVDSNDRAVDYLHQVQPSGLDLKPIDMALACRNEKCTAEDVFALGTDLIRQCQSAIRYLSVTETE
Ga0373916_0079724_83_514	3300034894	Sediment Slurry	VIDRLDMLDHGVSLLHGIRPTFRRPTKDEIHEEQLQSLEQSWQSRLPELSRLTSLESKDSKPYIRAILYAARLIYTWDNLTVASNDRAVEYLHQVQPPGLDLKPIDMALACRNDKCTAEDVFALRPDLNRQCESAVSYISTRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092672

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences