Metagenome Family F092760

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092760
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	94 residues
Representative Sequence	AVLRTMVYMRDPKNHSELVDYILKIHKIDSTVAAEALATVMAVYSKDGTKPREAVQKEIDIYREALKITKPFTPDELEDMSHQRRAYEVLNR
Number of Associated Samples	100
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.86 %
% of genes near scaffold ends (potentially truncated)	95.33 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.149 % of family members)
Environment Ontology (ENVO)	Unclassified (21.495 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.729 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.17% β-sheet: 0.00% Coil/Unstructured: 40.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01977	UbiD	58.88
PF09347	DUF1989	0.93
PF14226	DIOX_N	0.93
PF01266	DAO	0.93
PF01979	Amidohydro_1	0.93
PF13343	SBP_bac_6	0.93
PF00528	BPD_transp_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	58.88

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.87 %
Unclassified	root	N/A	1.87 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	83.18 %
Unclassified	root	N/A	1.87 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	83.18 %
Unclassified	root	N/A	1.87 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	82.24 %
Unclassified	root	N/A	1.87 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	82.24 %
Unclassified	root	N/A	1.87 %
Ignavibacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	82.24 %
Unclassified	root	N/A	1.87 %
Melioribacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Melioribacteraceae	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	82.24 %
Unclassified	root	N/A	1.87 %
Melioribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Melioribacteraceae → Melioribacter	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	82.24 %
Unclassified	root	N/A	1.87 %
Melioribacter roseus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Melioribacteraceae → Melioribacter → Melioribacter roseus	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100041665	All Organisms → cellular organisms → Bacteria	5205	Open in IMG/M
3300000789\|JGI1027J11758_12787967	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1040323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300004019\|Ga0055439_10108015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	831	Open in IMG/M
3300004267\|Ga0066396_10067741	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300004268\|Ga0066398_10152486	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300004463\|Ga0063356_105489726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300004479\|Ga0062595_100299071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1083	Open in IMG/M
3300005093\|Ga0062594_100248732	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300005172\|Ga0066683_10824791	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300005289\|Ga0065704_10397538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300005295\|Ga0065707_10453309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	798	Open in IMG/M
3300005332\|Ga0066388_103378556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	815	Open in IMG/M
3300005339\|Ga0070660_100664968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	873	Open in IMG/M
3300005340\|Ga0070689_100933542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	769	Open in IMG/M
3300005344\|Ga0070661_101536335	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300005355\|Ga0070671_100068263	All Organisms → cellular organisms → Bacteria	2965	Open in IMG/M
3300005444\|Ga0070694_101834403	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Melioribacteraceae → Melioribacter → Melioribacter roseus	517	Open in IMG/M
3300005451\|Ga0066681_10680273	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300005459\|Ga0068867_101839322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300005471\|Ga0070698_101171462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300005518\|Ga0070699_102155554	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300005618\|Ga0068864_101731132	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300005713\|Ga0066905_100243733	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1376	Open in IMG/M
3300005713\|Ga0066905_101597477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
3300005713\|Ga0066905_102178879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	516	Open in IMG/M
3300005719\|Ga0068861_102062719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300005844\|Ga0068862_101200492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	757	Open in IMG/M
3300006058\|Ga0075432_10111290	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1021	Open in IMG/M
3300006163\|Ga0070715_10921757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300006175\|Ga0070712_101477235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300006237\|Ga0097621_100755937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	898	Open in IMG/M
3300006804\|Ga0079221_10183703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1129	Open in IMG/M
3300006844\|Ga0075428_101810004	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300006846\|Ga0075430_100801168	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300006854\|Ga0075425_100328443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1761	Open in IMG/M
3300006871\|Ga0075434_102007745	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300006881\|Ga0068865_101370463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300006904\|Ga0075424_100145298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2512	Open in IMG/M
3300006914\|Ga0075436_100113535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1892	Open in IMG/M
3300007076\|Ga0075435_100448200	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1113	Open in IMG/M
3300009100\|Ga0075418_11326732	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300009156\|Ga0111538_11185727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	965	Open in IMG/M
3300009156\|Ga0111538_12043896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720	Open in IMG/M
3300009162\|Ga0075423_10774229	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1015	Open in IMG/M
3300009167\|Ga0113563_11894902	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	711	Open in IMG/M
3300009177\|Ga0105248_12273528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300009551\|Ga0105238_12387235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300010043\|Ga0126380_11665896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	572	Open in IMG/M
3300010358\|Ga0126370_11941530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300010359\|Ga0126376_10314028	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1370	Open in IMG/M
3300010362\|Ga0126377_10177500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2024	Open in IMG/M
3300010397\|Ga0134124_11950694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300010403\|Ga0134123_10902290	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	890	Open in IMG/M
3300012200\|Ga0137382_10993946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	602	Open in IMG/M
3300012494\|Ga0157341_1046262	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300012515\|Ga0157338_1062698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300012948\|Ga0126375_10920452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300012948\|Ga0126375_11482534	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300012958\|Ga0164299_11233704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300012971\|Ga0126369_10230388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1809	Open in IMG/M
3300012971\|Ga0126369_10241613	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1771	Open in IMG/M
3300012984\|Ga0164309_10952042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300013100\|Ga0157373_11120148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300015372\|Ga0132256_101611311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300015373\|Ga0132257_102825876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300015374\|Ga0132255_101583220	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300016270\|Ga0182036_10833204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	753	Open in IMG/M
3300016341\|Ga0182035_10693172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	887	Open in IMG/M
3300016387\|Ga0182040_11461792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300018052\|Ga0184638_1085645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1156	Open in IMG/M
3300018053\|Ga0184626_10447851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300018056\|Ga0184623_10071305	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1598	Open in IMG/M
3300018072\|Ga0184635_10226647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300018075\|Ga0184632_10278342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300018076\|Ga0184609_10471416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300018422\|Ga0190265_11207077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	875	Open in IMG/M
3300018422\|Ga0190265_11618787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300018433\|Ga0066667_11262848	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300019377\|Ga0190264_11617879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300019879\|Ga0193723_1164083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300019880\|Ga0193712_1126069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300021411\|Ga0193709_1125798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300022756\|Ga0222622_10788401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	694	Open in IMG/M
3300025310\|Ga0209172_10437089	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300025904\|Ga0207647_10067762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2162	Open in IMG/M
3300025922\|Ga0207646_10187576	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300025944\|Ga0207661_10567269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1041	Open in IMG/M
3300026075\|Ga0207708_10690786	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	872	Open in IMG/M
3300026095\|Ga0207676_11684236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300026327\|Ga0209266_1291185	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300027691\|Ga0209485_1317787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300027787\|Ga0209074_10163266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	811	Open in IMG/M
3300027873\|Ga0209814_10126898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1089	Open in IMG/M
3300031719\|Ga0306917_10823217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	728	Open in IMG/M
3300031740\|Ga0307468_100222040	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300031910\|Ga0306923_10500528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1374	Open in IMG/M
3300031941\|Ga0310912_10220824	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300031947\|Ga0310909_11395384	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300031954\|Ga0306926_10463103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1561	Open in IMG/M
3300032001\|Ga0306922_11923078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300032180\|Ga0307471_100009517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6441	Open in IMG/M
3300032205\|Ga0307472_100165638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1636	Open in IMG/M
3300033412\|Ga0310810_10093841	All Organisms → cellular organisms → Bacteria	3589	Open in IMG/M
3300033412\|Ga0310810_10190416	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.29%
Host-Associated	Host-Associated	32.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.94%
Plants	Host-Associated → Plants	32.71%
Aquatic	Environmental → Aquatic	9.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.15%
Sediment	Environmental → Aquatic → Sediment	6.54%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Marine	Environmental → Aquatic → Marine	0.93%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.06%
Loam	Environmental → Terrestrial → Soil → Loam	15.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.87%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1000416651	3300000559	Soil	VDYILRIHKIDSTVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFLNR
JGI1027J11758_127879671	3300000789	Soil	PTKALSVIRAVLRTMVYMREPKNHSELVDYILRIHKIDSTVAAEALATVMAVYSKDGTKPDAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFLNR
AP72_2010_repI_A100DRAFT_10403232	3300000837	Forest Soil	KGLSVIRAVLQTMVYMRDPKNHRELVEYVLKIHKIDSSVADEALATVMAVYSKDGTKPREAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYESLNR*
Ga0055439_101080151	3300004019	Natural And Restored Wetlands	MAYIRDPKNHGELVDYILKMHKIDSTVAAEALATVIVVYSKDGTKPRNAVQKEIDIYREALKSPKPFTPEELEDVTYLKRAFEELNR*
Ga0066396_100677412	3300004267	Tropical Forest Soil	LVEYVLKIHKIDSSVADEALATVMAVYSKDGTKPREAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYESLNR*
Ga0066398_101524862	3300004268	Tropical Forest Soil	VLQTMAYMRDPKNHRELVEYVLKIHKVDSSVAVDALATVMAVYSKDGTKPRETVQSEIDIYREALKITKPFTPEELEDMSHQKRAYESLTH*
Ga0063356_1054897261	3300004463	Arabidopsis Thaliana Rhizosphere	YMRDAKNQNELIEYILKIHKIDANVAARALATVMAVYSKDGTKPREFVQNEIDIYREGLKITQPFTPEDLEDMSFAKKALESLSR*
Ga0062595_1002990712	3300004479	Soil	MNYMRDPKNHGELVDYILKIHKIDNSVAAHALATVMAVYSKDGTKPREFVQKEIDIYRDSLKITQAFTPEDLEDMSFARKALEPLNR*
Ga0062594_1002487322	3300005093	Soil	LIDYILKIHKIDSNVAAHALATVMAVYSKDGTKPRESVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLKR*
Ga0066683_108247911	3300005172	Soil	LKRNSIKALSVIRAVLRTMLYMREPKNHSELVDYILRIHKIDSTVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFLNR*
Ga0065704_103975381	3300005289	Switchgrass Rhizosphere	NPAKGVSVIRAVLQTMNYMRDPKNHGELIDYILKIHKIDSNVAAHALATVMAVYSKDGTKPRESVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLKR*
Ga0065707_104533092	3300005295	Switchgrass Rhizosphere	VSVIRAVLQTMNYMRDPKNHGELVDYVLKIHKIDTNVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0066388_1033785561	3300005332	Tropical Forest Soil	KNPTKGVSVIRAVLQTMVYMRDPKNHRELVEYVLKIHKIDPSVADEALATVMAVYSKDGTKPRDAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYESLTH*
Ga0070660_1006649682	3300005339	Corn Rhizosphere	KTNPAKGVSVIRAVLQTMNYMRDPKNHGELIDYILKIHKIDSNVAAHALATVMAVYSKDGTKPRESVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLKR*
Ga0070689_1009335421	3300005340	Switchgrass Rhizosphere	VLRTMDYMRDPKNQQELIDYVLKIHKLEPNVAAHALATVMAVYSKDGTKPRDAVQKEIDIYRDALKISQPFTPEDLEDMSHLKRALESLNR*
Ga0070661_1015363352	3300005344	Corn Rhizosphere	PKNHGELIDYILKIHKIDSNVAAHALATVMAVYSKDGTKPRESVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLKR*
Ga0070671_1000682633	3300005355	Switchgrass Rhizosphere	GELVDYVLKIHKIDTNVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0070694_1018344031	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LRTMAYMREPKNHSELVDYILKIHKIDAAVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSHQRRANELVNR*
Ga0066681_106802732	3300005451	Soil	LLASSDALKKNPNKAVSVIRAVLRTMAYMRNPKNHNELVDYILKIHKIDSAVAAEALATVMAVYSRDGTKPREAVQHEIDIYREALKITKPLTPEELEDMSYQKRAYEFLSR*
Ga0068867_1018393222	3300005459	Miscanthus Rhizosphere	LLASADTLKTNPAKGVSVIRAVLQTMNYMRDPKNHGELVDYVLKIHKIDTNVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0070698_1011714621	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	NPNKAVAVIRAVLRTMAYMRDPKNHNELVDYILKKHKIDSSVAVEALATVMAVYSKDGTKPREAVQHEIDIYREALKITKPLTPEELEDMSYQKRAYEFLSR*
Ga0070699_1021555541	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	KGPSVIRAVLRTMAYMRDPKNHGELVDYVLKIHKIDSTVAAEALATVMAVYSKDGTKPREAVQKEIDIYRDALKITKAFTPEELEDMSYLRRAFENVNR*
Ga0070697_1017454521	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EYILKMHKIDSTVAAEALATVMAVYSRDGTKPREAVQNEIDIYREALKITKPFTPEDLEDMSYLKRALEYPNR*
Ga0068864_1017311321	3300005618	Switchgrass Rhizosphere	RDPKNHGELVDYVLKIHKIDTDVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0066905_1002437332	3300005713	Tropical Forest Soil	DALKKNPTKGLSVIRAVLQTMAYMRDPKNHRELVEYVLKIHKVDSSVAVDALATVMAVYSKDGTKPRETVQSEIDIYREALKITKPFTPEELEDMSHQKRAYESLTH*
Ga0066905_1015974772	3300005713	Tropical Forest Soil	YMRDPKNHRELVDYVLKIHKIDSSVAVDALATVMAVYSKDGIKPREAVQSEIDIYREALKITKPFTPEELEDMSYQKRAYESLTH*
Ga0066905_1021788792	3300005713	Tropical Forest Soil	ELVDYVLKIHKIDSSVAVEALATVMAVYSKDGTKPREAVQSEIDIYREALKMTKPFTPEELEDMSYQKRAYESLTH*
Ga0068861_1020627191	3300005719	Switchgrass Rhizosphere	RAVLQTMNYMRDPKNHGELVDYVLKIHKIDTNVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0068862_1012004922	3300005844	Switchgrass Rhizosphere	KNHGELVDYVLKIHKIDTDVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0075432_101112901	3300006058	Populus Rhizosphere	ASADTLKTNPAKGVSVIRAVLQTMNYMRDPKNHGELIDYILKIHKIDSNVAAHALATVMAVYSKDGTKPRESVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLKR*
Ga0070715_109217572	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PTKGRSVIRAVLRTMAYMRDPKNHNELVDYILKIHKIDSTVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSYLRRAFEEFNR*
Ga0070712_1014772351	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ASSDSLNRNPTKGPSVIRAVLRTMAYMRDPKNHGELVEYILKMHKIDSTVAAEALATVMAVYSRDGTKPREAVQNEIDIYREALKITKPFTPEDLEDMSYLKRALEYLNR*
Ga0097621_1007559371	3300006237	Miscanthus Rhizosphere	AKGVSVIRAVLQTMNYMRDPKNHGELVDYVLKIHKIDTNVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0079221_101837032	3300006804	Agricultural Soil	AYMRDAKNHSELVDYILKIHKIDSNVAADALATVMEVYSKDGTKPRQAVQNEIDIYREALKITKPLTPEELEDMSYQKRAYEVLSH*
Ga0075428_1018100041	3300006844	Populus Rhizosphere	LRTMAYMRDPKNHNELVDYISKIHKIDSFVAAEALATVMAVYSKDGTKPREAVQHEIDIYREALKITKPLTPDELEDMSYQKRAYEFLGR*
Ga0075430_1008011681	3300006846	Populus Rhizosphere	LQTMVYMRDPKNHRELVDYVLKIHKIDAAVAAEALATVMAVYSKDGTKSREAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYEFLNR*
Ga0075425_1003284432	3300006854	Populus Rhizosphere	ASADALKTNPAKGVSVVRAVLGTMNYMRDPKNHGELVDYVLKIHKIDTDVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0075434_1020077452	3300006871	Populus Rhizosphere	SSDALKKNPNKAVSVIRAVLRTMVYMRDPKNHNELVDYILKIHKIDSAVAAEALATVMAVYSKDGTKPREAVQHEIDIYREALKITKPLTPEELEDMSYQKRAYEFLSR*
Ga0068865_1013704632	3300006881	Miscanthus Rhizosphere	MAYMREPKNHSELVDYILKIHKIDAAVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYELVNR*
Ga0075424_1001452983	3300006904	Populus Rhizosphere	KTNPAKGVSVIRAVLQTMNYMRDPKNHGELVDYVLKIHKIDTNVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0075436_1001135352	3300006914	Populus Rhizosphere	LKTNPAKGVSVVRAVLGTMNYMRDPKNHGELVDYVLKIHKIDTDVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0075435_1004482002	3300007076	Populus Rhizosphere	SPLSGIGLLASADALKTNPAKGVSVVRAALRTMNYMRDPKNHGELVDYILKIHKIDNSVAAHALATVMAVYSKDGTKPREFVQKEIDIYRDSLKITQAFTPEDLEDMSFARKALEPLNR*
Ga0075418_113267321	3300009100	Populus Rhizosphere	KNQRELVDYVLKIHKIDPSVAADALATVMAVYSKDGTKPREAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYEFLNR*
Ga0111538_111857272	3300009156	Populus Rhizosphere	LASSDALKKNPNKAVSVIRAILRTMAYMRDPKNHNELVDYISKIHKIDSFVAAEALATVMAVYSKDGTKPREAVQHEIDIYREALKITKPLTPEELEDMSYQKRAYEFLGR*
Ga0111538_120438962	3300009156	Populus Rhizosphere	QTMNYMRDPKNHGELIDYILKIHKIDSNVAAHALATVMAVYSKDGTKPRESVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLKR*
Ga0075423_107742291	3300009162	Populus Rhizosphere	MNYMRDPKNHGELVDYVLKIHKIDTDVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0113563_118949021	3300009167	Freshwater Wetlands	QTMVYMRDPKNHRELVDYVLKIHKIDAAVAGEALATVMTVYSKDGTKPREAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYEFLNR*
Ga0105248_122735282	3300009177	Switchgrass Rhizosphere	ALKTNPAKGVSVVRAVLGTMNYMRDPKNHGELVDYVLKIHKIDTDVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0105238_123872351	3300009551	Corn Rhizosphere	VIRAVLQTMNYMRDPKNHGELVDYVLKIHKIDTNVAAHALQTVMAVYSKDGTKPRGLVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR*
Ga0126380_116658961	3300010043	Tropical Forest Soil	KNPVKGLSVVPAALKKKTYMRDPQNHRERVDYVLKIHKIDSSVAVEALATVMTVYSKDGTKPREAVQSEIDIYREALKTTKPFTPEELEDMSYQKRAYESLNH*
Ga0126370_119415302	3300010358	Tropical Forest Soil	LLASGDSLSKNPAKGRSVIRAVLRTMAYMQDSRNHGELIDYILKIHKIDSAVAAEALATAMAVYSKDGTKPREAVQKEIDIYREALKITKPFTPEELEDMSYLRDANR*
Ga0126376_103140281	3300010359	Tropical Forest Soil	IRAVLQTMVYMRDPKNHRELVEYVLKIHKIDSSVADEALATVMAVYSKDGTKPREAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYESLNR*
Ga0126377_101775001	3300010362	Tropical Forest Soil	HPAKGLSVIRAVLQTMTYMRDPKNHRELVDYVLKIHKIDSSVAVDALATVMAVYSKDGTKPREAVQSEIDIYREALKITKPFTPEELEDMSYQKRAYDSLSR*
Ga0134124_119506941	3300010397	Terrestrial Soil	MAYMREPKNHSELVDYILKIHKIDAAVATAALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEMVNR*
Ga0134123_109022901	3300010403	Terrestrial Soil	PAKGVSVIRAVLQTMNYMRDPKNHGELIDYILKIHKIDSNVAAHALATVMAVYSKDGTKPRESVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLKR*
Ga0137382_109939461	3300012200	Vadose Zone Soil	KNHNELVDYILKIHKIDSAVAAEALATVMAVYSKDGTKPREAVQHEIDIYREALKITKPLTPEELEDMSYQKRAYEFLSR*
Ga0157341_10462621	3300012494	Arabidopsis Rhizosphere	MRDPKNHGELIDYILKIHKIDSNVAAQALATVMAVYSKDGTKPRDFVQKEIDIYRESLKITQPFTPEDLEDMSFARKAFESLKR*
Ga0157338_10626982	3300012515	Arabidopsis Rhizosphere	RTMNYMRDPKNHEELIDYILKIHKIDSNVAAQALATVMAVYSKDGTKPRDFVQKEIDIYRESLKITQPFTPEDLEDMSFARKAFESLKR*
Ga0126375_109204522	3300012948	Tropical Forest Soil	DSLSKNPAKGRSVIRAVLRTMAYMRDPKNHGELVDYILKIHKIDSAVASEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSYLRDLNR*
Ga0126375_114825341	3300012948	Tropical Forest Soil	GIGLLASSDALKKNPTKGVSVIRAVLQTMVYMRDPKNHRELVEYVLKIHKIDSSVAVDALATVMAVYSKDGTKPRDAVQSEIDIYREALKITKPFTPEELEDMSYQKRAYETLTR*
Ga0164299_112337041	3300012958	Soil	VAVIRAVLRTMDYMRDPKNQQELIDYVLKIHKLEPNVAAHALATVMSVYSKDGTKPRDAVQKEIDIYREALKISQPFTPEDLEDMSHLKRALESLNR*
Ga0126369_102303882	3300012971	Tropical Forest Soil	GIGLLASADALKKNPTKGLSVIRAVLQTMAYMRDPKNHRELVEYVLKIHKIDSSVADEALATVMAVYSKDGTKPREAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYESLNR*
Ga0126369_102416131	3300012971	Tropical Forest Soil	MAYMRDPKHQGELIEYISKIHKIDANVAAHALATVMAVYSKDGTKPREFVQNEIDIYREGLKISQPFTPEDLEDMSFARKAFESLNR*
Ga0164309_109520421	3300012984	Soil	NKAVAVIRAVLRTMAYMRDPKNHNELVDYILKIHKIDSSVAVEALATVMAVYSKDGTKPREAVQHEIDIYRDALKITKPLTPEELEDMSYQKRAYEFLGR*
Ga0157373_111201481	3300013100	Corn Rhizosphere	KNHGELIDYILKIHKIDSNVAAHALATVMAVYSKDGTKPRESVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLKR*
Ga0132256_1016113111	3300015372	Arabidopsis Rhizosphere	KNHNELVDYILKIHKIDAAVAAEALAMVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYELVNR*
Ga0132257_1028258761	3300015373	Arabidopsis Rhizosphere	LKKNPNKAVSVIRAILRTMAYMRDPKNHNELVDYILKIHKIDSFVAAEALATVMAVYSKDGTKPREAVQHEIDIYREALKITKPLTPEELEDMSYQKRAYEFLGR*
Ga0132255_1015832201	3300015374	Arabidopsis Rhizosphere	KNHNELVDYILKIHKIDSSVAVEALATVMAVYSKDGTKPREAVQHEIDIYRDALKITKPLTPEELEDMSYQRRAYEILSR*
Ga0182036_108332041	3300016270	Soil	ASADALKKNPAKGVSVVRAVLRTMNYMRDPKNHGELIEYILKIHKIDANVAAHALATVMAVYSKDGTKPREFVQNEIDIYREGLKISQPFTPEDLEDMSFARKAFESLNR
Ga0182035_106931721	3300016341	Soil	NPAKGVSVVRAVLRTMNYMRDPKNHGELIEYILKIHKIDADVAAHALATVMAVYSKDGTKPREFVQNEIDIYREGLKISQPFTPEDLEDMSFARKAFESLNR
Ga0182040_114617921	3300016387	Soil	IRAVLRTMAYMRDPKNHGELIEYILKMHKLDSTVAAEALATVMAVYSKDGTKPHEAVQNEIDIYREALKITKPFTPEDLEDMSYLKRALEYLNR
Ga0184638_10856452	3300018052	Groundwater Sediment	GLLASSETLKRNSTKVLSVIRAVLRTMVYMRDPKNHSELVNYILKIHKIDSSVAAESLATVMAVYSKDGTKPREAVQKEIDIYREALKFTKPFTPEELEDMSHQRQAYEFLSR
Ga0184626_104478512	3300018053	Groundwater Sediment	AVLQTMVYMRDPKNHRELVDYVLKIHKIDSTVAVEALATVMAVYSKDGTKPREAVQSEIDIYREALKVTKPFTPEELEDMSHQKRAYEFLNR
Ga0184623_100713052	3300018056	Groundwater Sediment	VDYILKIHKIDSSVAAEALATVMAVYSKDGTKPREAVQKEIDIYRDALKITTPFTPEELEDMSHQRRAYEFLSLATCSDEAIWLVSG
Ga0184635_102266471	3300018072	Groundwater Sediment	PKNHRELVDYVVKIHKIDSSVAVEALATVMAVYSKDGTKPREAVQSEIDIYREALKISKPFTPEELEDMSHQKRAYEFLNR
Ga0184632_102783421	3300018075	Groundwater Sediment	EPKNHSELVNYILKIHKIDSSVAAESLATVMAVYSKDGTKPREAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFLNR
Ga0184609_104714161	3300018076	Groundwater Sediment	VLQTMVYMRDPKNHRELVDYVLKIHKIDASVAAEALATVMAVYSKDGTKPREAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYEFLNR
Ga0190265_112070772	3300018422	Soil	YMRDPKNHGELVDYILKIHKIDSSVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKVTKPFTPEELEDMSHQRRAYEFLNR
Ga0190265_116187871	3300018422	Soil	HSELVDYILKIHKIDSSVATEALATVMAVYSKDGTKPREAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFLNR
Ga0066667_112628481	3300018433	Grasslands Soil	VSVIRAVLRTMAYMRDPKNHNELVDYILKIHKIDSSVAAEALATVMAVYSKDGTKPREAVQHEIDIYREALKITKPLIPEELEDMSYQKRAYEFLSR
Ga0190264_116178791	3300019377	Soil	KNHSELVDYILKIHKIDSSVAAEALATVMAVYSKDGTKPREAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFVNR
Ga0193723_11640831	3300019879	Soil	LSVIRAVLRTMAYMREPKNHSELVDYILKIHKIDAAVAAEALATVMAVYSKDGTKPRVAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFVNR
Ga0193712_11260691	3300019880	Soil	SSETLTRNPAKVLSVIRAVLRTMAYMREPKNHSELVNYILKIHKIDSSVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSQQRRAYESLNR
Ga0193709_11257982	3300021411	Soil	TKALSVIRAVLRTMAYMREPKNHSELVDYILKIHKIDAAVAAEALATVMAVYSKDGTKPRVAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFVNR
Ga0222622_107884011	3300022756	Groundwater Sediment	AYMREPKNHSELVDYILKIHKIDAAVAAEALATVMAVYSKDGTKPRVAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFVNR
Ga0209172_104370891	3300025310	Hot Spring Sediment	KNHRELVDYVLKIHKIDSSVATEALATVMAVYSNDGTKPREAVQHEIDIYREALKITKAFTPEELEDMSYQKRAYELLNR
Ga0207647_100677623	3300025904	Corn Rhizosphere	ELVDYILKIHKIDAAVAVEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFVNR
Ga0207646_101875763	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VIRAVLRTMAYMRDPKNHNELVDYILKIHKIDSTVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSYLKDLNR
Ga0207661_105672692	3300025944	Corn Rhizosphere	QTMNYMRDPKNHGELIDYILKIHKIDSNVAAHALATVMAVYSKDGTKPRESVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR
Ga0207678_100689033	3300026067	Corn Rhizosphere	LVDYVLKIHKIDTNVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR
Ga0207708_106907861	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	RTMAYMREPKNHSELVDYILKIHKIDAAVAAEALATVMAVYSKDGTKPRDAVQKEIDIYCEALKITKPFTPEELEDMSHQRRAYELVNR
Ga0207676_116842361	3300026095	Switchgrass Rhizosphere	HGELVDYVLKIHKIDTDVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR
Ga0209266_12911851	3300026327	Soil	KRNSIKALSVIRAVLRTMLYMREPKNHSELVDYILRIHKIDSTVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSHQRRAYEFLNR
Ga0209485_13177871	3300027691	Agricultural Soil	PKNQSELIEYILKLHKIDANVAAHALATVMAVYSKDGTKPREVVQNEIDIYREGLKITQPFTPEDLEDMSFARKALESLYR
Ga0209074_101632662	3300027787	Agricultural Soil	IGLLASSDTLKKDPTKAVSVIRAVLRTMAYMRDAKNHNELVDYILKIHKIDSNVAADALATVMEVYSKDGTKPRQAVQKEIDIYREALKVTKPLTPEELEDMSYQKRAYEVLNR
Ga0209814_101268981	3300027873	Populus Rhizosphere	AVLRTMVYMRDPKNHSELVDYILKIHKIDSTVAAEALATVMAVYSKDGTKPREAVQKEIDIYREALKITKPFTPDELEDMSHQRRAYEVLNR
Ga0306917_108232172	3300031719	Soil	RDPKNHGELIEYILKIHKIDANVAAHALATVMAVYSKDGTKPREFVQNEIDIYREGLKISQPFTPEDLEDMSFARKAFESLNR
Ga0307468_1002220401	3300031740	Hardwood Forest Soil	LVDYVLKIHKIDPSVAAEALATVMAVYSKDGTKPREAVQSEIDIYREALKITKPFTPEELEDMSHQKRAYEFLNH
Ga0306923_105005281	3300031910	Soil	SGIGLLASADALKKNPAKGVSVVRAVLRTMNYMRDPKNHGELIEYILKIHKIDANVAAHALATVMAVYSKDGTKPREFVQNEIDIYREGLKISQPFTPEDLEDMSFARKAFESLNR
Ga0310912_102208241	3300031941	Soil	KNHGELIEYILKIHKIDANVAAHALATVMAVYSKDGTKPREFVQNEIDIYREGLKISQPFTPEDLEDMSFARKAFESLNR
Ga0310909_113953841	3300031947	Soil	LLASADSLNRNPTKGPSVIRAVLRTMAYMRDPKNHGELIEYILKMHKLDSTVAAEALATVMAVYSKDGTKPHEAVQNEIDIYREALKITKPFTPEDLEDMSYLKRALEYLNR
Ga0306926_104631032	3300031954	Soil	MNYMRDPKNHGELIEYILKIHKIDANVAAHALATVMAVYSKDGTKPREFVQNEIDIYREGLKISQPFTPEDLEDMSFARKAFESLNR
Ga0306922_119230782	3300032001	Soil	VIRAVLRTMAYMRDPKNHGELIEYILKMHKLDSTVAAEALATVMAVYSKDGTKPHEAVQNEIDIYREVLKITKPFTPEDLEDMSYLKRA
Ga0307471_1000095178	3300032180	Hardwood Forest Soil	NKNPTKGRSVIRAVLRTMAYMRDPKNHNELVDYILKIHKIDSTVAAEALATVMAVYSKDGTKPRDAVQKEIDIYREALKITKPFTPEELEDMSYLRRAFEEFNR
Ga0307472_1001656383	3300032205	Hardwood Forest Soil	RTMTYMRDPKNHGELVDYVLKIHKIDSAVASEALATVMAVYSKDGTKPREAVQKEIDIYREALKITKPFTPEELEDMSYLRRAFEEFSR
Ga0310810_100938411	3300033412	Soil	VSVVRAVLRTMNYMRDPKNHEELIDYILKIHKIDSNVAAQALATVMAVYSKDGTKPRDFVQKEIDIYRESLKITQPFTPEDLEDMSFARKVFESLNR
Ga0310810_101904161	3300033412	Soil	ALKTNPAKGVSVVRAVLGTMNYMRDPKNHGELVDYVLKIHKIDTDVAAHALQTVMAVYSKDGTKPRELVQKEIDIYRESLKIAQPFTPEDLEDMSFARKAFESLNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092760

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences