Basic Information | |
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Family ID | F092793 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 107 |
Average Sequence Length | 99 residues |
Representative Sequence | MATNNTGDWRELFDVALFEPNRVRLRQCIEHAKHAINNRLDVLMNDQSENGRIISERIALSDALTTLAELHKIVYARKSSPSVRRQDGRAAGQADL |
Number of Associated Samples | 96 |
Number of Associated Scaffolds | 107 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 80.37 % |
% of genes near scaffold ends (potentially truncated) | 21.50 % |
% of genes from short scaffolds (< 2000 bps) | 77.57 % |
Associated GOLD sequencing projects | 82 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (72.897 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.561 % of family members) |
Environment Ontology (ENVO) | Unclassified (46.729 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (53.271 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 59.38% β-sheet: 0.00% Coil/Unstructured: 40.62% | Feature Viewer |
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Pfam ID | Name | % Frequency in 107 Family Scaffolds |
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PF00480 | ROK | 7.48 |
PF13620 | CarboxypepD_reg | 6.54 |
PF02880 | PGM_PMM_III | 1.87 |
PF04977 | DivIC | 1.87 |
PF08241 | Methyltransf_11 | 0.93 |
PF13561 | adh_short_C2 | 0.93 |
PF11925 | DUF3443 | 0.93 |
PF05690 | ThiG | 0.93 |
PF13432 | TPR_16 | 0.93 |
COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
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COG1940 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain | Transcription [K] | 14.95 |
COG0033 | Phosphoglucomutase/phosphomannomutase | Carbohydrate transport and metabolism [G] | 1.87 |
COG1109 | Phosphomannomutase | Carbohydrate transport and metabolism [G] | 1.87 |
COG2919 | Cell division protein FtsB | Cell cycle control, cell division, chromosome partitioning [D] | 1.87 |
COG4839 | Cell division protein FtsL | Cell cycle control, cell division, chromosome partitioning [D] | 1.87 |
COG0214 | Pyridoxal 5'-phosphate synthase subunit PdxS | Coenzyme transport and metabolism [H] | 0.93 |
COG2022 | Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) | Coenzyme transport and metabolism [H] | 0.93 |
COG2070 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family | General function prediction only [R] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 73.83 % |
Unclassified | root | N/A | 26.17 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300001593|JGI12635J15846_10165333 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1500 | Open in IMG/M |
3300001661|JGI12053J15887_10072178 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1909 | Open in IMG/M |
3300002245|JGIcombinedJ26739_100181640 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1991 | Open in IMG/M |
3300004152|Ga0062386_101335253 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 597 | Open in IMG/M |
3300005335|Ga0070666_10673665 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 757 | Open in IMG/M |
3300005337|Ga0070682_101837332 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 529 | Open in IMG/M |
3300005338|Ga0068868_100147884 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1933 | Open in IMG/M |
3300005344|Ga0070661_100238576 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1399 | Open in IMG/M |
3300005538|Ga0070731_10437803 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 870 | Open in IMG/M |
3300005563|Ga0068855_100958341 | Not Available | 901 | Open in IMG/M |
3300005564|Ga0070664_102144545 | Not Available | 530 | Open in IMG/M |
3300005841|Ga0068863_100038396 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 4556 | Open in IMG/M |
3300005841|Ga0068863_102232370 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 557 | Open in IMG/M |
3300005842|Ga0068858_102498900 | Not Available | 510 | Open in IMG/M |
3300005995|Ga0066790_10001680 | All Organisms → cellular organisms → Bacteria | 9425 | Open in IMG/M |
3300006047|Ga0075024_100788084 | Not Available | 530 | Open in IMG/M |
3300006050|Ga0075028_100107898 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1429 | Open in IMG/M |
3300006050|Ga0075028_100169942 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1162 | Open in IMG/M |
3300006052|Ga0075029_100055781 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2296 | Open in IMG/M |
3300006057|Ga0075026_100171641 | All Organisms → cellular organisms → Bacteria | 1125 | Open in IMG/M |
3300006059|Ga0075017_100611855 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 833 | Open in IMG/M |
3300006163|Ga0070715_10313229 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 844 | Open in IMG/M |
3300006163|Ga0070715_11035493 | Not Available | 513 | Open in IMG/M |
3300006173|Ga0070716_100485260 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 908 | Open in IMG/M |
3300006173|Ga0070716_100693460 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 777 | Open in IMG/M |
3300006175|Ga0070712_101161088 | All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis | 671 | Open in IMG/M |
3300006176|Ga0070765_100143810 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2120 | Open in IMG/M |
3300006237|Ga0097621_100135473 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2100 | Open in IMG/M |
3300006354|Ga0075021_10067590 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2087 | Open in IMG/M |
3300006893|Ga0073928_10376961 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1044 | Open in IMG/M |
3300009089|Ga0099828_10832663 | Not Available | 826 | Open in IMG/M |
3300009090|Ga0099827_11198664 | Not Available | 660 | Open in IMG/M |
3300009093|Ga0105240_10168190 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2598 | Open in IMG/M |
3300009098|Ga0105245_10182764 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2004 | Open in IMG/M |
3300009101|Ga0105247_10119778 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1704 | Open in IMG/M |
3300009174|Ga0105241_10016067 | All Organisms → cellular organisms → Bacteria | 5488 | Open in IMG/M |
3300009177|Ga0105248_10733879 | Not Available | 1114 | Open in IMG/M |
3300009553|Ga0105249_13362577 | Not Available | 515 | Open in IMG/M |
3300011120|Ga0150983_15147771 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 773 | Open in IMG/M |
3300011269|Ga0137392_10148509 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1890 | Open in IMG/M |
3300011270|Ga0137391_10321343 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1333 | Open in IMG/M |
3300012096|Ga0137389_11566174 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 555 | Open in IMG/M |
3300012189|Ga0137388_10446756 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1199 | Open in IMG/M |
3300012202|Ga0137363_10016257 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 4888 | Open in IMG/M |
3300012203|Ga0137399_11739251 | Not Available | 512 | Open in IMG/M |
3300012205|Ga0137362_10040025 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 3772 | Open in IMG/M |
3300012363|Ga0137390_10035809 | All Organisms → cellular organisms → Bacteria | 4760 | Open in IMG/M |
3300012363|Ga0137390_11205641 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 704 | Open in IMG/M |
3300012363|Ga0137390_11849589 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 534 | Open in IMG/M |
3300012582|Ga0137358_10299934 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1091 | Open in IMG/M |
3300012683|Ga0137398_10632866 | Not Available | 741 | Open in IMG/M |
3300012685|Ga0137397_10080778 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2364 | Open in IMG/M |
3300012917|Ga0137395_10055216 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2514 | Open in IMG/M |
3300012922|Ga0137394_10101389 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2426 | Open in IMG/M |
3300012925|Ga0137419_10081167 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2193 | Open in IMG/M |
3300012944|Ga0137410_10671459 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 862 | Open in IMG/M |
3300012955|Ga0164298_10879422 | Not Available | 650 | Open in IMG/M |
3300012960|Ga0164301_10743708 | Not Available | 743 | Open in IMG/M |
3300012989|Ga0164305_10538983 | Not Available | 926 | Open in IMG/M |
3300013296|Ga0157374_10025028 | All Organisms → cellular organisms → Bacteria | 5355 | Open in IMG/M |
3300013307|Ga0157372_10996293 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 971 | Open in IMG/M |
3300015241|Ga0137418_10215640 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1649 | Open in IMG/M |
3300020579|Ga0210407_10044375 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 3311 | Open in IMG/M |
3300020581|Ga0210399_10330958 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1271 | Open in IMG/M |
3300020581|Ga0210399_10692679 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 838 | Open in IMG/M |
3300020583|Ga0210401_10359358 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1318 | Open in IMG/M |
3300021046|Ga0215015_10524257 | Not Available | 718 | Open in IMG/M |
3300021170|Ga0210400_10188704 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1673 | Open in IMG/M |
3300021478|Ga0210402_11177395 | Not Available | 694 | Open in IMG/M |
3300021478|Ga0210402_11766744 | Not Available | 545 | Open in IMG/M |
3300021559|Ga0210409_10264202 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1556 | Open in IMG/M |
3300021559|Ga0210409_10643961 | Not Available | 930 | Open in IMG/M |
3300022531|Ga0242660_1056973 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 868 | Open in IMG/M |
3300022532|Ga0242655_10190167 | Not Available | 623 | Open in IMG/M |
3300022557|Ga0212123_10564111 | Not Available | 726 | Open in IMG/M |
3300022726|Ga0242654_10326099 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 572 | Open in IMG/M |
3300025903|Ga0207680_11164391 | Not Available | 550 | Open in IMG/M |
3300025905|Ga0207685_10125266 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1133 | Open in IMG/M |
3300025905|Ga0207685_10246750 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 862 | Open in IMG/M |
3300025927|Ga0207687_10060836 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 2665 | Open in IMG/M |
3300025928|Ga0207700_10997286 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 750 | Open in IMG/M |
3300025939|Ga0207665_10411638 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1031 | Open in IMG/M |
3300025949|Ga0207667_11254342 | Not Available | 719 | Open in IMG/M |
3300025986|Ga0207658_11279450 | Not Available | 671 | Open in IMG/M |
3300026023|Ga0207677_10095027 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2177 | Open in IMG/M |
3300026035|Ga0207703_12084063 | Not Available | 543 | Open in IMG/M |
3300026088|Ga0207641_10094137 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2627 | Open in IMG/M |
3300026088|Ga0207641_11917345 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 594 | Open in IMG/M |
3300026294|Ga0209839_10024786 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2320 | Open in IMG/M |
3300026557|Ga0179587_10317131 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1007 | Open in IMG/M |
3300027651|Ga0209217_1113315 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 768 | Open in IMG/M |
3300027660|Ga0209736_1160599 | Not Available | 594 | Open in IMG/M |
3300027678|Ga0209011_1194076 | Not Available | 556 | Open in IMG/M |
3300027869|Ga0209579_10184303 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1117 | Open in IMG/M |
3300027894|Ga0209068_10056728 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1999 | Open in IMG/M |
3300027903|Ga0209488_10346455 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1105 | Open in IMG/M |
3300027911|Ga0209698_10278000 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1331 | Open in IMG/M |
3300027915|Ga0209069_10433035 | Not Available | 727 | Open in IMG/M |
3300028047|Ga0209526_10094207 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2107 | Open in IMG/M |
3300028906|Ga0308309_10151218 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1868 | Open in IMG/M |
3300031057|Ga0170834_105821427 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 860 | Open in IMG/M |
3300031720|Ga0307469_10295142 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1332 | Open in IMG/M |
3300032180|Ga0307471_100022905 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 4627 | Open in IMG/M |
3300032205|Ga0307472_101678561 | Not Available | 627 | Open in IMG/M |
3300032829|Ga0335070_10608063 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1028 | Open in IMG/M |
3300032893|Ga0335069_10614638 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1245 | Open in IMG/M |
3300034195|Ga0370501_0032136 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1603 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 20.56% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 11.21% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 9.35% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 8.41% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 7.48% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 5.61% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.74% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.80% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.80% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.80% |
Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 1.87% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.87% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.87% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 1.87% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 1.87% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.87% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.87% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.87% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.87% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.87% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.93% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.93% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.93% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.93% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.93% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.93% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.93% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
3300001661 | Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly) | Environmental | Open in IMG/M |
3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
3300004152 | Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3 | Environmental | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
3300005538 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 | Environmental | Open in IMG/M |
3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300005995 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 | Environmental | Open in IMG/M |
3300006047 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 | Environmental | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006052 | Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013 | Environmental | Open in IMG/M |
3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
3300006059 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012 | Environmental | Open in IMG/M |
3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006354 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 | Environmental | Open in IMG/M |
3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
3300012683 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG | Environmental | Open in IMG/M |
3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
3300015241 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
3300021046 | Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300022531 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022532 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022557 | Paint Pots_combined assembly | Environmental | Open in IMG/M |
3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026294 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes) | Environmental | Open in IMG/M |
3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
3300027651 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027660 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027678 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027869 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
3300027911 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300027915 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032829 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3 | Environmental | Open in IMG/M |
3300032893 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1 | Environmental | Open in IMG/M |
3300034195 | Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12635J15846_101653333 | 3300001593 | Forest Soil | MVTNNTGDWRDLFDVALFERNRARSRQCIEHAKHAINNRLDVLTKDQSENGRIISERIALSDALTTLAELQKIVHARKPSPSVRRQDNRTAGQADL* |
JGI12053J15887_100721781 | 3300001661 | Forest Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPADLR* |
JGIcombinedJ26739_1001816401 | 3300002245 | Forest Soil | MPTTNTGDWRELFDVALFEPNRVRLRQRIELAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDNRAADQADLR* |
Ga0062386_1013352531 | 3300004152 | Bog Forest Soil | WRELFDVALFEPNRGRLRQRIKQAKQVINNRLECLTRDSLVNDQSENDQSENGRIVAERIALSDALATLGELHKIVYSRKSSSRLKRQDVRTAGPTDLH* |
Ga0070666_106736651 | 3300005335 | Switchgrass Rhizosphere | VAAKITGDWRELFDVALFEPNRVRLRQRIERAKLAIRNRLDILMNDQSENGRVIAERIALSDALTTLAELHKIVYARKASPKVGCQDDRAAGQADLR* |
Ga0070682_1018373321 | 3300005337 | Corn Rhizosphere | AGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH* |
Ga0068868_1001478843 | 3300005338 | Miscanthus Rhizosphere | MSTNIAGDWRLLFDAALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH* |
Ga0070661_1002385762 | 3300005344 | Corn Rhizosphere | MSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH* |
Ga0070731_104378032 | 3300005538 | Surface Soil | MTTNTTADWRDLFDVALFEPGRARLRQRIVRAKQAITQRLDVLMSDHSENERAFSERIALSDALTTLAELHRIVYARKVSVRRENDGAAESVQPRETVWR* |
Ga0068855_1009583412 | 3300005563 | Corn Rhizosphere | MSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPQ* |
Ga0070664_1021445451 | 3300005564 | Corn Rhizosphere | LRIDMSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH* |
Ga0068863_1000383964 | 3300005841 | Switchgrass Rhizosphere | MSTNIAGDWRLLFDAALFEPNRARLRECIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSSPATKRQDDSAARPH* |
Ga0068863_1022323702 | 3300005841 | Switchgrass Rhizosphere | MAANNTGDWRELFDVALFEPNRVRLRQRIERAKLAIRNRLDILMNDQSENGRVIAERIALSDALTTLAELHKIVYARKASPKVGCQNDRAAGQADLR* |
Ga0068858_1024989001 | 3300005842 | Switchgrass Rhizosphere | ALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH* |
Ga0066790_100016809 | 3300005995 | Soil | MTPDNTGDWRELFDVALFESNRMRLRQRIEHAKHAINHRLGVLMSDQSENGRIVSERIALADALTTLAELHKIVYARKSSSSVRRQDDRAAGQADLG* |
Ga0075024_1007880841 | 3300006047 | Watersheds | MPTNTTGDWRDLFDTALFEPNRVKLRRRIERAKHAINNRLDVLMQDKNENGRIVSERIALSDALTTLAELHQIVFAPKAGPKNGRRDDIAAGQAELR* |
Ga0075028_1001078981 | 3300006050 | Watersheds | PNRVRLRQRIEHAKDAINNRLDFLMNGQLMNDQSENGRIVAERIALSDALTTLGELHKIVYSRKSSPNPKRRDDRAAGQADLR* |
Ga0075028_1001699422 | 3300006050 | Watersheds | MATNNTGDWRELFDVALFEPNRVRLRQCIEHAKHAINNRLDVLMNDQSENGRIISERIALGDALTTLAELHKIVYARKSNPSVRRRDDRAASLVDF* |
Ga0075029_1000557812 | 3300006052 | Watersheds | MATNNTGDWRELFDVALFEPNRVRLRQCIAHAKHAINNRLDVLMNDQSENGRIISERIALGDALTTLAELHKIVYARKSNPSVRRRDDRAAGLVDF* |
Ga0075026_1001716413 | 3300006057 | Watersheds | MVTHETGDWRDLFDVALFEPSRVKLRQRIENARRAINNRLDILQKDRDENERTISERIALSDALTTLAELHKIVYARKPSTSVRGQDGRTGVKADL* |
Ga0075017_1006118551 | 3300006059 | Watersheds | MATNNTGDWRELFDVALFEPNRVRLRQCIEHAKHAINNRLDVLMNDQSENGRIISERIALGDALTTLAELHKIVYARKSNPSVRRRDDRAAGLVDF* |
Ga0070715_103132291 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MVYITESPQPIRQLDMNSAGLKKLSLRIDMSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH* |
Ga0070715_110354931 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MAANNTGDWRELFDVALFEPNRVRLRQRIERAKLAIRNRLDILMNDQSENGRVIAERIALSDALTTLAELHKIVYARKASPK |
Ga0070716_1004852602 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MAANNTGDWRELFDVALFEPNRVRLRQRIERAKLAIRNRLDILMNDQSENGRVIAERIALSDALTTLAELHKIVYARKASPKVGCQDDRAAGQADLR* |
Ga0070716_1006934601 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MPTTNAGDWRELFDVALFEPNRVRLRRRIELAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAADQADLR* |
Ga0070712_1011610881 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MADITRDWRDLLDVALFEPNRVKLRRRIERAKQAINTRLDVLRQDNNNENGRLVSERIALSDALNTLAELHNIVFARPASPKIRRQNGTAAGQADLR* |
Ga0070765_1001438102 | 3300006176 | Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKDQSESGRVISERIALSDALTTLAELQKIVYARKASPSVRRQDNRTAGQADL* |
Ga0097621_1001354732 | 3300006237 | Miscanthus Rhizosphere | VAAKITGDWRELFDVALFEPNRVRLRQRIERAKLAIRNRLDILMNDQSENGKVIAERIALSDALTTLAELHKIVYARKASPKVGCQNDRAAGQADLR* |
Ga0075021_100675902 | 3300006354 | Watersheds | MPTDWRELFDVALFEPNRVRLRQRIEHAKDAINNRLDFLMNGQLMNDQSENGRIVAERIALSDALTTLGELHKIVYSRKSSPNPKRRDDRAAGQADLR* |
Ga0073928_103769612 | 3300006893 | Iron-Sulfur Acid Spring | MVTNNTGDWRDLFDVALFEPNRARSKQCIEHAKYAINNRLDVLTKDQSENARIISERIALSDALTTLAELQKMVYARKPSPSVRHQDNRTAGQADL* |
Ga0099828_108326631 | 3300009089 | Vadose Zone Soil | MATNNTGDWRELFDVALFEPNRVRLRQCIEHAKHAINNRLDVLMNDQSENGRIISERIALSDALTTLAELHKIVYARKSSPSVRRQDGRAAGQADL* |
Ga0099827_111986642 | 3300009090 | Vadose Zone Soil | MPTTNTGDWRDLFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSGPSAKRQDDGAAGQAAVSR |
Ga0105240_101681903 | 3300009093 | Corn Rhizosphere | MSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSSPATKRQDDSAARPQ* |
Ga0105245_101827642 | 3300009098 | Miscanthus Rhizosphere | MVYITESPQPIRQLDMNSAGLKKLSLRIDMSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSSPATKRQDDSAARPH* |
Ga0105247_101197782 | 3300009101 | Switchgrass Rhizosphere | MSTNIAGDWRLLFDAALFEPNRARLRECIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH* |
Ga0105241_100160673 | 3300009174 | Corn Rhizosphere | VAAKITGDWRELFDVALFEPNRVRLRQRIERAKLAIRNRLDILMNDQSENGRVIAERIALSDALTTLAELHKIVYARKASPKVGCQNDRAAGQADLR* |
Ga0105248_107338792 | 3300009177 | Switchgrass Rhizosphere | MSTNIAGDWRLLFDAALFEPNRARLRECIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSSPATKRQDDSAARPQ* |
Ga0105249_133625771 | 3300009553 | Switchgrass Rhizosphere | GDWRLLFDAALFEPNRARLRECIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH* |
Ga0150983_151477712 | 3300011120 | Forest Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKEQSENARIISERIALSNALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL* |
Ga0137392_101485094 | 3300011269 | Vadose Zone Soil | MVTNNTRDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKDQSENGRIISERIALSDALTTLAELQKIVYARKPSPSVRRQDHRTAGQADL* |
Ga0137391_103213431 | 3300011270 | Vadose Zone Soil | DWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKDQSENGRIISERIALSDALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL* |
Ga0137389_115661741 | 3300012096 | Vadose Zone Soil | MPTTNTGDWSELFDVALFEPNRVRLRQRIELAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGLR* |
Ga0137388_104467562 | 3300012189 | Vadose Zone Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKDQSENGRIISERIALSDALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL* |
Ga0137363_100162576 | 3300012202 | Vadose Zone Soil | MSTTNAGDWRELFDGALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGLR* |
Ga0137399_117392511 | 3300012203 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLALLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKR |
Ga0137362_100400254 | 3300012205 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGLR* |
Ga0137390_100358095 | 3300012363 | Vadose Zone Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKEQSENARIISERIALSDALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL* |
Ga0137390_112056412 | 3300012363 | Vadose Zone Soil | MPTTNTGDWRELFDVALFEPNRVRLRQRIELAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAADQADLR* |
Ga0137390_118495891 | 3300012363 | Vadose Zone Soil | MPTTNTGDWRDLFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSGPSAKRQDDGAAGQADVR* |
Ga0137358_102999342 | 3300012582 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLALLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGLR* |
Ga0137398_106328661 | 3300012683 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLALLMNGQLMNDKSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGFR* |
Ga0137397_100807782 | 3300012685 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDKSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRPAGPADLR* |
Ga0137395_100552164 | 3300012917 | Vadose Zone Soil | MPTTNTGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAALHKIVYSRKSSPSAKRQDDRAAGPAGLR* |
Ga0137394_101013894 | 3300012922 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDKSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGLR* |
Ga0137419_100811672 | 3300012925 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDRSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGLR* |
Ga0137410_106714592 | 3300012944 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRPAGPADLR* |
Ga0164298_108794222 | 3300012955 | Soil | MSTNITRDWRLLFDIALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH* |
Ga0164301_107437081 | 3300012960 | Soil | MAANNTGDWRELFDVALFEPNRVRLRQRIERAKLAIRNRLDILMNDQSENGRLIAERIALSDALTTLAELHKIVYARKASPKVGCQDDRAAGQADLR* |
Ga0164305_105389831 | 3300012989 | Soil | MSTNIAGDWRLLFDAALFEPNRARLRECIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPQ* |
Ga0157374_100250281 | 3300013296 | Miscanthus Rhizosphere | WRLLFDIALFEPNRARLRQCIANAKHALRNRLDALMRDVPPNDRDENERDLSERIALSDALTTLTELHKIDYSRTSRPATKRQDDSAARPH* |
Ga0157372_109962932 | 3300013307 | Corn Rhizosphere | MSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSSPATKRQDDSAARPH* |
Ga0137418_102156402 | 3300015241 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNGQLMNDRSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGLR* |
Ga0210407_100443755 | 3300020579 | Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKEQSENARIISERIALSNALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL |
Ga0210399_103309582 | 3300020581 | Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKEQSENVRIISERIALSNALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL |
Ga0210399_106926792 | 3300020581 | Soil | MPTTNTGDWRELFDVALFEPNRVRLRQRIELAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAADQADLR |
Ga0210401_103593581 | 3300020583 | Soil | INLPVGLRFAALAPFHLRRDIMVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKGCQSENGRIISERIALSDALTTLAELQKIVYARKPSPSVRRQDNKTASQADL |
Ga0215015_105242571 | 3300021046 | Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKDQSENGRIISERIALIDALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL |
Ga0210400_101887042 | 3300021170 | Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKDQSESGRIISERIALSDALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL |
Ga0210402_111773952 | 3300021478 | Soil | MPTTNTGDWRELFDVALFEPNRVRLRQRIELAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGQADLR |
Ga0210402_117667441 | 3300021478 | Soil | MANITGDWRELFDVALFEPNRVKLRRRIERAKQAINNRLDILRHDNKENGRLVSERIALSDALTTLAELHNIVFACTASPKVGRRDDTAAGQADLR |
Ga0210409_102642021 | 3300021559 | Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKEQSENARIISERIALSNALTTLAELQKIVYARKPSPSVRRQDNRTAG |
Ga0210409_106439611 | 3300021559 | Soil | MPYEHIINLPVGLRFAALAPFHLRRDIMVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKGCQSENGRIISERIALSDALTTLAELQKIVYARKPSPSVRRQDNKTASQADL |
Ga0242660_10569732 | 3300022531 | Soil | MVTNNTGDWRDLFDVALFEANRARSRQCIEHAKHAINNRLDVLTKDQSESGRIISERIALSNALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL |
Ga0242655_101901672 | 3300022532 | Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKEQSENARIISERIALSNALTTLAELQKIVYARKPSPSLRRQDNKTASQADL |
Ga0212123_105641111 | 3300022557 | Iron-Sulfur Acid Spring | MVTNNTGDWRDLFDVALFEPNRARSKQCIEHAKYAINNRLDVLTKDQSENARIISERIALSDALTTLAELQKMVYARKPSPSVRHQDNRTAGQADL |
Ga0242654_103260991 | 3300022726 | Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKEQSENVRIISERIALSDALTTLAELQKIVYARKPSPSVRRQDNRTAGQADL |
Ga0207680_111643911 | 3300025903 | Switchgrass Rhizosphere | VAAKITGDWRELFDVALFEPNRVRLRQRIERSKLAIRNRLDILMNDQSENGRVIAERIALSDALTTLAELHKIVYARKASPKVGCQDDR |
Ga0207685_101252661 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | MVYITESPQPIRQLDMNSAGLKKLSLRIDMSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH |
Ga0207685_102467502 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | MAANNTGDWRELFDVALFEPNRVRLRQRIERAKLAIRNRLDILMNDQSENGRVIAERIALSDALTTLAELHKIVYARKASPKVGCQNDRAAGQADLR |
Ga0207687_100608362 | 3300025927 | Miscanthus Rhizosphere | MSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSSPATKRQDDSAARPQ |
Ga0207700_109972862 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | ALFEPNRARLRQSIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH |
Ga0207665_104116381 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MPTTNAGDWRELFDVALFEPNRVRLRRRIELAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAADQADLR |
Ga0207667_112543421 | 3300025949 | Corn Rhizosphere | MSTNIAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSR |
Ga0207658_112794502 | 3300025986 | Switchgrass Rhizosphere | MSTNIAGDWRLLFDAALFEPNRARLRECIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH |
Ga0207677_100950274 | 3300026023 | Miscanthus Rhizosphere | LLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH |
Ga0207703_120840631 | 3300026035 | Switchgrass Rhizosphere | IAGDWRLLFDVALFEPNRARLRQCIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSRPATKRQDDSAARPH |
Ga0207641_100941373 | 3300026088 | Switchgrass Rhizosphere | MSTNIAGDWRLLFDAALFEPNRARLRECIANAKHAIRNRLDALMRDVPPNDRDENERVLSERIALSDALTTLTELHKIVYSRTSSPATKRQDDSAARPQ |
Ga0207641_119173452 | 3300026088 | Switchgrass Rhizosphere | MAANNTGDWRELFDVALFEPNRVRLRQRIERAKLAIRNRLDILMNDQSENGRVIAERIALSDALTTLAELHKIVYARKASPKVGCQDDRAAGQADLL |
Ga0209839_100247863 | 3300026294 | Soil | MTPDNTGDWRELFDVALFESNRMRLRQRIEHAKHAINHRLGVLMSDQSENGRIVSERIALADALTTLAELHKIVYARKSSSSVRRQDDRAAGQADLG |
Ga0179587_103171312 | 3300026557 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDKSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGLR |
Ga0209217_11133152 | 3300027651 | Forest Soil | ERNRARSRQCIEHAKHAINNRLDVLTKDQSENGRIISERIALSDALTTLAELQKIVHARKPSPSVRRQDNRTAGQADL |
Ga0209736_11605991 | 3300027660 | Forest Soil | MVTNNTGDWRDLFDVALFERNRARSRQCIEHAKHAINNRLDVLTKDQSENGRIISERIALSDALTTLAELQKIVHARKPSPSVRRQDNRTAGQADL |
Ga0209011_11940761 | 3300027678 | Forest Soil | MSTTDTGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDFLMNDQSENGRIIAERIALSDALTTLGELHKIVYSRKSSPSVKRQDDRAAGQADLR |
Ga0209579_101843032 | 3300027869 | Surface Soil | MTTNTTADWRDLFDVALFEPGRARLRQRIVRAKQAITQRLDVLMSDHSENERAFSERIALSDALTTLAELHRIVYARKVSVRRENDGAAESVQPRETVWR |
Ga0209068_100567281 | 3300027894 | Watersheds | MPTDWRELFDVALFEPNRVRLRQRIEHAKDAINNRLDFLMNGQLMNDQSENGRIVAERIALSDALTTLGELHKIVYSRKSSPNPKRRDDRAAGQADLR |
Ga0209488_103464551 | 3300027903 | Vadose Zone Soil | MSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLALLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPAGLR |
Ga0209698_102780002 | 3300027911 | Watersheds | MATNNTGDWRELFDVALFEPNRVRLRQCIAHAKHAINNRLDVLMNDQSENGRIISERIALGDALTTLAELHKIVYARKSNPSVRRRDDRAAGLVDF |
Ga0209069_104330352 | 3300027915 | Watersheds | MVTHETGDWRDLFDVALFEPSRVKLRQRIENARRAINNRLDILQNDRDENERTISERIALSDALTTLAELHKIVYARKPSTSVRGQDGRTGVKADL |
Ga0209526_100942073 | 3300028047 | Forest Soil | MPTTNTGDWRELFDVALFEPNRVRLRQRIELAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDNRAADQADLR |
Ga0308309_101512184 | 3300028906 | Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAINNRLDVLTKDQSESGRVISERIALSDALTTLAELQKIVYARKASPSVRRQDNRTAGQADL |
Ga0170834_1058214272 | 3300031057 | Forest Soil | MVTNNTGDWRDLFDVALFEPNRARSRQCIEHAKHAIHNRLDVLTKDQDENARIISERIALGDALTTLAELQKMVYARKPRPSVRRQDSRTAGQADL |
Ga0307469_102951423 | 3300031720 | Hardwood Forest Soil | MTDGGRLTTDMSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDLLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRHDDRAAGPADLR |
Ga0307471_1000229056 | 3300032180 | Hardwood Forest Soil | MTDDGRLTTDMSTTNAGDWRELFDVALFEPNRVRLRQRIEHAKHAINNRLDVLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPADLR |
Ga0307472_1016785612 | 3300032205 | Hardwood Forest Soil | MSTTNAGDWRELFDVALFEPSRVRLRQRIEHAKHAINNRLDVLMNGQLMNDQSENGRIVAERIALSDALTTLAELHKIVYSRKSSPSAKRQDDRAAGPADLR |
Ga0335070_106080632 | 3300032829 | Soil | MAANTAGDWRELFDIALFEPNRVKLRRRIERAKHAIHIRLDALMHDKNENGRMVSERIALSDALTTLAELHQIVFARKASPKVERRDDMAAGPADLR |
Ga0335069_106146382 | 3300032893 | Soil | MAANTAGDWRELFDIALFEPNRVKLRRRIERAKHAIHIRLDALMHDKNENGRMVSERIALSDALTTLAELHEIVFARKASPKVERRDDMAAGPADLR |
Ga0370501_0032136_834_1124 | 3300034195 | Untreated Peat Soil | MANIAVDWRDLFDIALFEPNRVKLRRRIERAKQAINDRLDILRNDKTENERLLSERIALGDALTTLAELHNIVFARTTSPKVERRDDIAAGQADLR |
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