Metagenome / Metatranscriptome Family F092836

Basic Information
Family ID	F092836
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	77 residues
Representative Sequence	MCPLFHSRSPEPPPALEAVPGEFPPIDGAEIAATTYGKRVAGDFYDSLRVSPERILFGLLDVAGRRENNQSILSAAQ
Number of Associated Samples	98
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.82 %
% of genes near scaffold ends (potentially truncated)	93.46 %
% of genes from short scaffolds (< 2000 bps)	85.05 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Most Common Taxonomy
Group	Bacteria (94.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (11.215 % of family members)
Environment Ontology (ENVO)	Unclassified (24.299 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.402 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.10% β-sheet: 0.00% Coil/Unstructured: 61.90%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13485	Peptidase_MA_2	59.81
PF14559	TPR_19	5.61
PF01433	Peptidase_M1	1.87
PF07228	SpoIIE	1.87
PF13624	SurA_N_3	0.93
PF00155	Aminotran_1_2	0.93
PF00144	Beta-lactamase	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	1.87
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.93
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	85.98 %
Unclassified	root	N/A	5.61 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.61 %
Unclassified	root	N/A	5.61 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.61 %
Unclassified	root	N/A	5.61 %
candidate division KSB1	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.61 %
Unclassified	root	N/A	5.61 %
unclassified candidate division KSB1	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.61 %
Unclassified	root	N/A	5.61 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.61 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.67 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10261935	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300001661\|JGI12053J15887_10211953	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300002245\|JGIcombinedJ26739_100287748	All Organisms → cellular organisms → Bacteria → Acidobacteria	1528	Open in IMG/M
3300002245\|JGIcombinedJ26739_100553065	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300003505\|JGIcombinedJ51221_10085599	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300004080\|Ga0062385_10536552	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300004091\|Ga0062387_100282315	All Organisms → cellular organisms → Bacteria → Acidobacteria	1058	Open in IMG/M
3300004091\|Ga0062387_100543990	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300004092\|Ga0062389_103142143	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300004121\|Ga0058882_1366255	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300004635\|Ga0062388_100405273	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300005610\|Ga0070763_10063946	All Organisms → cellular organisms → Bacteria → Acidobacteria	1782	Open in IMG/M
3300005921\|Ga0070766_10585286	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300009518\|Ga0116128_1073016	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300009523\|Ga0116221_1019871	All Organisms → cellular organisms → Bacteria → Acidobacteria	3551	Open in IMG/M
3300009523\|Ga0116221_1084007	All Organisms → cellular organisms → Bacteria → Acidobacteria	1422	Open in IMG/M
3300009638\|Ga0116113_1092895	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300009665\|Ga0116135_1420569	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300009672\|Ga0116215_1037716	All Organisms → cellular organisms → Bacteria → Acidobacteria	2213	Open in IMG/M
3300009762\|Ga0116130_1027109	All Organisms → cellular organisms → Bacteria → Acidobacteria	1877	Open in IMG/M
3300009764\|Ga0116134_1117963	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300010379\|Ga0136449_100731504	All Organisms → cellular organisms → Bacteria → Acidobacteria	1652	Open in IMG/M
3300011270\|Ga0137391_10457954	All Organisms → cellular organisms → Bacteria → Acidobacteria	1084	Open in IMG/M
3300012351\|Ga0137386_10141515	All Organisms → cellular organisms → Bacteria → Acidobacteria	1718	Open in IMG/M
3300012925\|Ga0137419_10339880	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300012925\|Ga0137419_10917649	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300012927\|Ga0137416_11853585	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300014169\|Ga0181531_10326670	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300014654\|Ga0181525_10480899	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300014655\|Ga0181516_10675479	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300015193\|Ga0167668_1104953	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300017933\|Ga0187801_10315825	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300017943\|Ga0187819_10128380	All Organisms → cellular organisms → Bacteria → Acidobacteria	1512	Open in IMG/M
3300018006\|Ga0187804_10589517	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300018021\|Ga0187882_1241466	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300018030\|Ga0187869_10084196	All Organisms → cellular organisms → Bacteria → Acidobacteria	1624	Open in IMG/M
3300018040\|Ga0187862_10088453	All Organisms → cellular organisms → Bacteria → Acidobacteria	2168	Open in IMG/M
3300018062\|Ga0187784_10175043	All Organisms → cellular organisms → Bacteria → Acidobacteria	1754	Open in IMG/M
3300018085\|Ga0187772_11425970	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300018090\|Ga0187770_10091680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2255	Open in IMG/M
3300020580\|Ga0210403_10566944	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300020581\|Ga0210399_10393765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	1155	Open in IMG/M
3300021088\|Ga0210404_10317660	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300021170\|Ga0210400_10028946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4298	Open in IMG/M
3300021403\|Ga0210397_10104172	All Organisms → cellular organisms → Bacteria → Acidobacteria	1921	Open in IMG/M
3300021406\|Ga0210386_11804524	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300021433\|Ga0210391_11273462	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300021475\|Ga0210392_10460473	All Organisms → cellular organisms → Bacteria → Acidobacteria	933	Open in IMG/M
3300021477\|Ga0210398_11506842	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300025442\|Ga0208034_1073527	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300025612\|Ga0208691_1003816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4626	Open in IMG/M
3300026318\|Ga0209471_1224372	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300026508\|Ga0257161_1030112	All Organisms → cellular organisms → Bacteria → Acidobacteria	1064	Open in IMG/M
3300026514\|Ga0257168_1047689	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300027072\|Ga0208238_1000687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2126	Open in IMG/M
3300027158\|Ga0208725_1044093	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300027505\|Ga0209218_1131461	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300027669\|Ga0208981_1159829	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300027738\|Ga0208989_10203041	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300027825\|Ga0209039_10310310	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300027846\|Ga0209180_10326831	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300027853\|Ga0209274_10505478	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300027884\|Ga0209275_10291206	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300027889\|Ga0209380_10233547	All Organisms → cellular organisms → Bacteria → Acidobacteria	1080	Open in IMG/M
3300028572\|Ga0302152_10285377	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300028775\|Ga0302231_10273919	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300028798\|Ga0302222_10170794	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300028863\|Ga0302218_10040793	All Organisms → cellular organisms → Bacteria → Acidobacteria	1462	Open in IMG/M
3300028863\|Ga0302218_10204814	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300028866\|Ga0302278_10505350	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300028873\|Ga0302197_10320901	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300028906\|Ga0308309_11128995	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300029993\|Ga0302304_10149583	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300029999\|Ga0311339_10964805	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300030399\|Ga0311353_10032578	All Organisms → cellular organisms → Bacteria	5498	Open in IMG/M
3300030509\|Ga0302183_10361606	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300030746\|Ga0302312_10373917	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300030760\|Ga0265762_1119936	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300030878\|Ga0265770_1065241	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300030878\|Ga0265770_1109131	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300030940\|Ga0265740_1020309	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300030991\|Ga0073994_11772419	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031028\|Ga0302180_10108434	All Organisms → cellular organisms → Bacteria → Acidobacteria	1581	Open in IMG/M
3300031057\|Ga0170834_107958923	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300031128\|Ga0170823_10483049	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300031231\|Ga0170824_105705067	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300031261\|Ga0302140_10746975	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300031525\|Ga0302326_12546404	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300031708\|Ga0310686_101081428	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300031718\|Ga0307474_11287792	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300031753\|Ga0307477_10068219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2456	Open in IMG/M
3300031788\|Ga0302319_10768774	All Organisms → cellular organisms → Bacteria → Acidobacteria	961	Open in IMG/M
3300031962\|Ga0307479_10705733	All Organisms → cellular organisms → Bacteria → Acidobacteria	987	Open in IMG/M
3300031962\|Ga0307479_11354767	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300031962\|Ga0307479_11666349	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300032160\|Ga0311301_10304388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2549	Open in IMG/M
3300032895\|Ga0335074_10379379	All Organisms → cellular organisms → Bacteria → Acidobacteria	1549	Open in IMG/M
3300033545\|Ga0316214_1036400	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300034124\|Ga0370483_0024233	All Organisms → cellular organisms → Bacteria → Acidobacteria	1811	Open in IMG/M
3300034124\|Ga0370483_0214565	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300034163\|Ga0370515_0245680	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.57%
Aquatic	Environmental → Aquatic	21.50%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.81%
Freshwater	Environmental → Aquatic → Freshwater	21.50%
Peat	Environmental → Terrestrial → Peat	17.76%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.76%
Loam	Environmental → Terrestrial → Soil → Loam	15.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.54%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.15%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.28%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.61%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027072	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_102619352	3300001356	Peatlands Soil	MHFLFHSRVPDPTPTIEPVPTIFPTIEGADIAAVFVGKRVAGDFYDSLRVSPERILFGLLDVAGRREETRGLLTAAQ
JGI12053J15887_102119531	3300001661	Forest Soil	MHPLFHSRARELAPVVEPVQGQFPKVGDAQIAAAFYGKRVAGDLYDSLRVSPERILFGLLDVAGRRGDNQAILSAAQETFRGLGASLFAPPEANESTP*
JGIcombinedJ26739_1002877482	3300002245	Forest Soil	MHPLFHSRARELAPVVEPVQGQFPKVGDAEIAAAFYGKRVAGDLYDSLRVSPERILFGLLDVAGRRGDNQAILSA
JGIcombinedJ26739_1005530652	3300002245	Forest Soil	MHSLFHSRARELAPVVEPVQGQFPKVEDAEIAAAFYGKRVAGDLYDSLRVSPERILFGLLDVAGRREDNQAILSAAQETFRG
JGIcombinedJ51221_100855992	3300003505	Forest Soil	MCALFQSRTPAPPPAVEPVPSEFPKMDGAEIAATTYGQRVAGDFYDSVRVSPERILFGLLDVAGRRENN
Ga0062385_105365521	3300004080	Bog Forest Soil	MCPLFRSRAPEPPPILEPVPGEFPQIEGAEIAATTYGKRVAGDFYDSLRVSPERILFGLLDVA
Ga0062387_1002823151	3300004091	Bog Forest Soil	MCALFQSRVPEPLPAVEPVPGQFPKITGAEIAASTYGKRVAGDFYDSLRVSPERILFGLLDVAGRRE
Ga0062387_1005439902	3300004091	Bog Forest Soil	MCSLFQSRAPDPPPPLEPAASEFPKIDGAEIAATTYGKRVAGDFYDSLRVSPDRILFGLLDVAGRRENNQLILSNAQKILRTLGAE
Ga0062389_1031421432	3300004092	Bog Forest Soil	MCPLFHSRSPEPPPALEAVPGEFPPIDGAEIAATTYGKRVAGDFYDSLRVSPERILFGLLDVAGRRENNQSILSAAQ
Ga0058882_13662552	3300004121	Forest Soil	SPAVEPVPGQFLKIEGAEIAATTYGKRVAGDFYDSLRVGPERILFGLLDVAGRREENQAILSAAQSLFRTVGADLFFSLRLQ*
Ga0062388_1004052732	3300004635	Bog Forest Soil	MCPLFRSRAPEPPPILEPVPGEFPQIEGAEIAATTYGKRVAGDFYDSLRVSPERILFGLLDVAGRRENNQQVLSAAQRIFRTLGAELFAPPD
Ga0070763_100639461	3300005610	Soil	MHSLFHSNAQETVPAVESVLSEFPVIDGAEIAAVTYGARVAGDFYDSLRVSSERILFGLLDVAGRRENNQPVLTAAQEIFRRLAGDL
Ga0070766_105852862	3300005921	Soil	MCSLFHPREPVPPPAPEAATNDFPKIQGAEIAAATYGPRIAGDFYECLRVGPQRILFGLLDVAGRREKNQTVLTAAQNMFRT
Ga0116128_10730162	3300009518	Peatland	MCALFQPRVPDPPPSLEPAANQFPKIQGAEIAASSYGKRVAGDFYDSLRVSPERVLFGLLDVAGRRTSNQAIL
Ga0116221_10198711	3300009523	Peatlands Soil	MCALFQSRVPEPLPAVEPVPSQFPKIAGAEIAASTYGKRVAGDFYDSLRLSPERILFGLLDVAGRRENNEVI
Ga0116221_10840071	3300009523	Peatlands Soil	MFPTFKSSEPDAPLAVEPVASEFPKIEGAQIAAVTYGKRVAGDFYDSVRVSPERILLGLLDVAGRREDNQQVLSAAQNIFRTL
Ga0116113_10928951	3300009638	Peatland	VPDPPPSLEPAANQFPKIQGAEIAASSYGKRVAGDFYDSLRVSPERVLFGLLDVAGRRTSNQAILSAAQNAFRTLGAEL
Ga0116135_14205691	3300009665	Peatland	MHSLFHSNAHATVPAVESVLSEFPVIDGAEIAAVTYGARVAGDFYDSLRVSSERVLFGLLDVAGRRESNQPILNAGQEIFRRLASELFGKD
Ga0116215_10377161	3300009672	Peatlands Soil	MFPTFKSSEPDAPLAVEPVASEFPKIEGAQIAAVTYGKRVAGDFYDSVRVSPERILLGLLDVAGRREDNQQV
Ga0116130_10271092	3300009762	Peatland	MCALFQPRVPDPPPSLEPAANQFPKIQGAEIAASSYGKRVAGDFYDSLRVSPERVLFGLLDVAGRRT
Ga0116134_11179632	3300009764	Peatland	MCPLFQSRAPHPLPAIEPVPSEFPKINGAEIAAATYGQRVAGDFYDSLRVSPERILFGLLDVAGRRDTNQQILSAAQNIFRTL
Ga0136449_1007315041	3300010379	Peatlands Soil	MCPLFQSRAPEPPPALEPVASEFPKMEGAEIAATTYGKRVAGDFYDSLRVGPERILFGLLDVAGRRESNQQI
Ga0137391_104579542	3300011270	Vadose Zone Soil	MCALFHSRTPEPPPALEPVPGEFPNIEGAEIAATTYGARVAGDFYDSLRVSPERILFGLLDVAGRREN
Ga0137386_101415151	3300012351	Vadose Zone Soil	MLLFDQSWPLMHALFHSRAPELAAVVEPVPGQFPKVEDAEIAAASYGKRVAGDLYDSLRVGPERILFGLLDV
Ga0137361_117228992	3300012362	Vadose Zone Soil	MCPLFHSRVPEPPPALEPVPGEFPNIEGAEIAATTYGARVAGDFYDSLRVSPERILFGLL
Ga0137419_103398802	3300012925	Vadose Zone Soil	MCALFHSRVAEPIPVLEPVPGDFPKIDGAEIAATTYGKRVAGDFYDSLRVGPERILFGLLDVAGRRENNRLLLSTAQNVFRARGVELFS
Ga0137419_109176492	3300012925	Vadose Zone Soil	MYSLFHSRAPELAPVVEPVQGQFPKVDDAEIAAAFYGKRVAGDLYDSLRVSPERILFGLLDVAGRREDN
Ga0137416_118535851	3300012927	Vadose Zone Soil	MCALFHSRVAEPIPVLEPVPGDFPKIDGAEIAATTYGKRVAGDFYDSLRVGPERILFGLLDVAGRRENNRLLLSTAQN
Ga0181531_103266702	3300014169	Bog	MCSLFHSDVPESTAAVEPVPNEFPKIEGAEIAASTLGKRVAGDFYDSVRVSPERILFGLLDLAGRRESNQHILS
Ga0181525_104808991	3300014654	Bog	MCPLFKPREQQPAPTSEPVPHQFPLIEGAAIAADTYGPRVGGDFYDSLRVGPQRVLFGLLDLAGRRASNQAI
Ga0181516_106754791	3300014655	Bog	MSALFKSREPEVVPVAEPVPGEFPKIEGAEIAASTYGTRVAGDFYDSLRVSPGRILFGLLDVAGRRENNQAILSAAQKIFRTVGT
Ga0167668_11049532	3300015193	Glacier Forefield Soil	MCALFQSREPEPVPAAELVPGEFPKIDGAEIAATTYGKRVAGDFYDSLRVGPERILFGLLDVAGRRENNQPILSAATKIFRTLGTEL
Ga0187801_103158251	3300017933	Freshwater Sediment	VAVEPVASEFPKIAGAQIAAVTYGKRVAGDFYDSVRVSPERVLFGLLDVAGRREDNQEVLSTAQKIFRTLGAEL
Ga0187819_101283801	3300017943	Freshwater Sediment	MFALFQSRAPEPVAVLEPVPAEFPKISGAEIAATTYGKRVAGDFYDSLRASPERILFGL
Ga0187804_105895171	3300018006	Freshwater Sediment	MFALFQSRAPEPVAVLEPVPAEFPKISGAEIAATTYGKRVAGDFYDSLRVSPERILFGLLDVAGRRESNQGILSA
Ga0187872_101318791	3300018017	Peatland	MCALFQSRAPDPPSSPEPAAGEFPKIQGAEIAATSYGKRVAGDFYDSVRVSPERVLFGLLDVAGRRETNQIVLSAAQKMFRSLGTELFSRPD
Ga0187882_12414661	3300018021	Peatland	MCALFQSRAPDPPSSPEPAAGEFPKIQGAEIAATTYGKRVAGDFYDSVRVSPERVLFGLLDV
Ga0187869_100841961	3300018030	Peatland	MCPLFQSRAPHPLPAIEPVPSEFPKINGAEIAAATYGQRVAGDFYDSLRVSPERILFGLLDVAGRRDTNQQILSAAQNIFRTLGTELFS
Ga0187862_100884531	3300018040	Peatland	MCALFQSRVPDPLLPLEPATSEFPKIEGAEIAATTYGKRVAGDFYDSLRVSPERVLFGLLDVAGRRESNQIILSAAQNMFRTLGT
Ga0187784_101750432	3300018062	Tropical Peatland	MRSLFRSRARRPAPAVGPVPTVFPKIGGAEIAASFVGQRIAGDFYDSVRVSPERILFGLLDVAGRREQNRGLLIAAQE
Ga0187772_114259702	3300018085	Tropical Peatland	MCALFQSRVPQPVPAVEPVPGEFPKIEGAEIAATTYGKRVAGDFYDSLRVSPERILLSLLDVAGRREN
Ga0187770_100916801	3300018090	Tropical Peatland	MCALFHSRVPETVPAVEQVPGEFPRIVGAEIAATTYGKRVAGDFYDCLRVGPERILFGLLDVAGRREKN
Ga0210403_105669441	3300020580	Soil	MCPLFQSRTPEPPPALEPVAGEFPKMEGAEIAATTYGQRVAGDFYDSLRVSPDRVLFGLLDVAGRRQSNQQILSAAQ
Ga0210399_103937651	3300020581	Soil	MSPLFKSRVPAFVPAVEPDPSDFPKIEGAEIAATTYGKRVAGDFYDSLRVSPERVLFGLLDIAGRRASNQAILSAAQK
Ga0210404_103176602	3300021088	Soil	MRALFHSRVPEPLPALEPVPADFPKIEGAEIAATTYGARVAGDFYDSLRVSPERILFGLLDVAGRRENNQ
Ga0210400_100289463	3300021170	Soil	MSGFFESRTSEPVRAWEPVSGDFPKIEGAQIAATTYGKRVAGDFYDSLRVGPERILFGLLDVAGRRENNQLILSTAQ
Ga0210397_101041721	3300021403	Soil	MCALFQHRVAETLAEPEASTTAFPLIDGAEIAANTYGKRVAGDFYDGLRVSPERVLFGLLDVAGRRETNQAVLSAAQNLFRS
Ga0210386_118045241	3300021406	Soil	MCALFHSRVPEELPSLEAVASPFPKILGAEIAATTYGNRVAGDFYDSLRVGKERVLFGLLDVAGRRETNQAILNTAQQIFRTVGAELFSA
Ga0210391_112734622	3300021433	Soil	MCPLFRSRAPEPPPALEPAPGEFPKIEGAEIAATTYGKRIAGDFYDSLRVGPERILFGLLDVAGRRESNQQILSAAQKIFRTLGA
Ga0210392_104604731	3300021475	Soil	MRALFHSRVPEPLPALEPVPADFPKIEGAEIAATTYGARVAGDFYDSLRVSPERILFGLLDVAGRRENNQAILSAATK
Ga0210398_115068422	3300021477	Soil	MHSLFHSNAHETVPAVESVLSEFPVIDGAEIAAVTYGARVAGDFYDSLRVSSERILFGLLDVAG
Ga0224546_10262822	3300022515	Soil	MCPLFQSRVPEPVPAIELVPGEFPKIDGAEIAATTYGKRVAGDFYDSLRVSPERVLFGLLDI
Ga0208034_10735271	3300025442	Peatland	MCALFQSRVPDPLLPLEPATSEFPKIEGAEIAATTYGKRVAGDFYDSLRVSPERVLFGLLDVAGRRESNQIILSAAQNMF
Ga0208691_10038161	3300025612	Peatland	MCALFQSRVPDPLLPLEPATSEFPKIEGAEIAATTYGKRVAGDFYDSLRVSPERVLFGLLDVAGRRESNQIILSAAQNMFR
Ga0209471_12243721	3300026318	Soil	MCSLFQSRVPQFVPAAAEPVPSEFPKIYGAEIAATTYGKRVAGDFYDSLRVSPERILFGLLDVAGRREN
Ga0257161_10301122	3300026508	Soil	MHPLFHSRVPELAPVVEPVQGQFPKVADAEIAAAFYGKRVAGDLYDSLRVSAERILFGLLDVAGRREDNQAILSAAQET
Ga0257168_10476892	3300026514	Soil	MHSLFHSRAPELAPVVEPVPGQFPKVEDAEIAAAFYGKRVAGDLYDSLRVSPERILFGLLDVAGR
Ga0208238_10006871	3300027072	Forest Soil	MCSLFQPRDTEPIAAAEPVASDFPKIDGAGIAATTYGKRIAGDFYDSLRVGKERILFGLLDVAGRRE
Ga0208725_10440931	3300027158	Forest Soil	MCSLFNSREPESSPAVEPVPGQFLKIEGAEIAATTYGKRVAGDFYDSLRVGPERILFGLLDVAGRREE
Ga0209218_11314612	3300027505	Forest Soil	MCAQFQPREPEPLQTLEPATAAFPKIDGAEIAATTYGKRAAGDFYDSLRVSPERILFGLLDVAGRRETNQIILS
Ga0209221_11777621	3300027609	Forest Soil	MCPLFRSRTPEPPPALEPVASEFPKIVGAEIAATTYGKRIAGDFYDSLRVGPERILFGLLDVAGRRENNQIILSAAQNIFHTLGPELFSPPD
Ga0208981_11598292	3300027669	Forest Soil	MRSLFHSRARELAPVVEPVQGQFPKVEDAEIAAAFYGKRVAGDLYDSLRVSPERILFGLLDVAGRREDNQAILSAAQGTFR
Ga0208989_102030412	3300027738	Forest Soil	MRSLFQSRPLESAPTVEPVRTEFPRIDGAEMASVFYGKRVAGDFCDALRVSPERILFGLLDVAGRREYNRGILST
Ga0209039_103103101	3300027825	Bog Forest Soil	MCALFQSRTPAPPLPALEVAPGEFPKIEGAEIAATTYGQRVAGDFYDSLRVSPERILFGLLDVA
Ga0209180_103268312	3300027846	Vadose Zone Soil	MHSLFHSRAPELAPVVEPVPGQFPKVEDAEIAAAFYGKRVAGDLYDSLRVSTERILFGLLDVAGRR
Ga0209274_105054782	3300027853	Soil	MCALFQSRTPAPPPAVEPVPSEFPKMEGAEIAATTYGQRVAGDFYDSLRVSPDRILFGLLDVAGRRENNQQILAAAQK
Ga0209275_102912061	3300027884	Soil	MCALFQSRTPEPSPALEPVAGEFPKMEGAEIAATTYGQRVAGDFYDSLRVSPDRVLFGLLDVAGRRQSNQQILSAAQQI
Ga0209380_102335471	3300027889	Soil	MCALFQSRTPAPPPVVEPVPSEFPKMDGAEIAATTYGQRVAGDFYDSVRVSPERILFGLLDVAGRRENNQEILAAAQKIF
Ga0302152_102853771	3300028572	Bog	MCSLFHSDVPESTAAVEPVPNEFPKIEGAEIAASTLGKRVAGDFFDSVRVSPERILFGLLDLAGRRESN
Ga0302231_102739191	3300028775	Palsa	MCSLFQSREPEPLPALEPVASEFPKIDGAEIAAITYGKRVAGDFYDSLRVGPERILFGLLDVAGRRENNQVILSAAQKIFRGLGGDLF
Ga0302222_101707942	3300028798	Palsa	MHSLFHSNAHATVPAVESVLSEFPVIDGAEIAAVTYGARVAGDFYDSLRVSSERILFGMLDVAGRRENNQPILNAAQE
Ga0302218_100407932	3300028863	Palsa	MCSLFHSDVPEPTAAVEPVPNEFPKIEGAEIAASTLGKRVAGDFFDSVRVSPERILFGLLDLAGRRESNQHILSV
Ga0302218_102048141	3300028863	Palsa	MCSLFQSREPEPLPALEPVASEFPKIDGAEIAAITYGKRVAGDFYDSLRVGPERILFGLLDVAGRR
Ga0302278_105053502	3300028866	Bog	MCALFKSREPEVVPVAEPVPGEFPKIEGAEIAANTYGTRVAGDFYDSLRVSPERILFGLLDVAGRRDNNQTILSAAQKIFRTVGA
Ga0302230_102886912	3300028871	Palsa	MCSLFQSREPEPLPALEPVASEFPKIDGAEIAAITYGKRVAGDFYDSLRVGPERILFGLLDVAGRRENNQVILSAAQKIFRGLGGDLFSGSDF
Ga0302197_103209011	3300028873	Bog	MCPLFQSRAPHPLPAIEPVPSEFPKINGAEIAAATYGQRVAGDFYDSLRVSPERILFGLLDVAGRRDTNQQ
Ga0308309_111289951	3300028906	Soil	MCALSQPRVPDPQPSLEPAANGFPKIQGADIAASTYGKQVAGDFHDSLRVSPERILFGLLDVAGRRESNQAILSAAQSTFRTLGAELFS
Ga0311361_112406751	3300029911	Bog	MCSLFKRRAPEVLPGVEPAPGEFPEVDGAALAAATYGKRVAGDFYDSLRVSPERIL
Ga0302304_101495832	3300029993	Palsa	MCSLFHSDVPEPTAAVEPVPNEFPKIEGAEIAASTLGKRVAGDFFDSVRVSPERILFGLLDLAGRRESNQHILSVAQNIFRTRGTA
Ga0311339_109648051	3300029999	Palsa	MRFLFQPRATEPPPATEPAPGEFPTVEGAEIAATTYGKRVAGDFYDSIRVSPERILFGLLDVAGRRDKNQSILAAAQKIFHTFGASLFAGAD
Ga0311353_100325781	3300030399	Palsa	MHSLFHSNAHATVPAVESVLSEFPVIDGAEIAAVTYGARVAGDFYDSLRVSSERILFGMLDVAGRRENNQPILNAAQEIFR
Ga0302183_103616061	3300030509	Palsa	MCALFQSREPEPLPALEPVPSEFPKIDGAEIAATTYGPRVAGDFYDSLRVSPERILFGLLDVAG
Ga0302312_103739172	3300030746	Palsa	MCSLFQSREPEPLPALEPVASEFPKIDGAEIAAITYGKRVAGDFYDSLRVGPERILFGLLDVAG
Ga0265762_11199362	3300030760	Soil	MCSLFHPREPVPPPAPEAATNDFPKIQGAEIAAATYGPRIAGDFYECLRVGPQRILFGLLDVAGRREKNQTVLTAAQN
Ga0265770_10652412	3300030878	Soil	MHSLFHSNAHETVPAVEPVLSEFPVIDGAEIAAVTYGARVAGDFYDSLRVSSERILFGLLDVAGRRENNQ
Ga0265770_11091312	3300030878	Soil	MCPLFRSRAPEPPPAVEPAPGEFPQIEGAEIAATTYGKRVAGDFYDSLRVGPERILFGLLDVA
Ga0265740_10203092	3300030940	Soil	MCAIFHSRVPEEFPSLEPAANQFPKILGAEIAATTYGNRVAGDFYDSLRVGKERVLFGLLDVAGRRE
Ga0073994_117724191	3300030991	Soil	MRSLFHSRGAEPAPAIEPVPTVFPQIEGADIAADFVGKRVAGDFYDSLRVSPERILFGLLDVAGTSRGQPRHSRDRPRDL
Ga0302180_101084341	3300031028	Palsa	MHSLFHSNAHATVPAVESVLSEFPVIDGAEIAAVTYGARVAGDFYDSLRVSSERILFGMLDVAGRRENNQPILNAAQEIFRRLA
Ga0170834_1079589232	3300031057	Forest Soil	MFSLFQSRAPEPVAVWEPVPAEFPKISGAEIAATTYGKRVAGDFYDSLRVSPERILFGLLDVAGRRESNQGILSAAQKVFRTLG
Ga0170823_104830491	3300031128	Forest Soil	MLVSARRLLSLKMAALFHPRTPQPPPDLEIVPSVFPEIDGAEIAATTYGKRVAGDFYDCLRVSPERILFGLLDVAGRRENNQLILSAAQKIFRTL
Ga0170824_1057050671	3300031231	Forest Soil	MRALFHSRVPEPPPALESVPDDFPKIDGAEIAATTYGKRVAGDFYDSLRASPERILFGLLDVAGRRETNQRILTTAQNIFRTSGAELFFGVRHQR
Ga0302140_107469751	3300031261	Bog	MCPLFQSRAPHPLPAIEPVPSEFPKINGAEIAAATYGQRVAGDFYDSLRVSPERILFGLLDVAGRRDTN
Ga0302326_125464041	3300031525	Palsa	MCALFKSREPEVVPVAEPVPGEFPKIEGAEIAANTYGTRVAGDFYDSLRVSPERILFGLLDVAGRRDNNQTILSAA
Ga0310686_1010814281	3300031708	Soil	MCPLFRSRAPEPPPAIEPAPGEFPKIDGAEIAATTYGKRVAGDFYDSLRVSPERILFGLLDVAGRRENNLQIL
Ga0307474_112877922	3300031718	Hardwood Forest Soil	MCALFRSRAAEPVPVLEPVPDDFPKIDGAEIAATTYGKRIAGDFYDSLRVGPERVLFGLLDVAG
Ga0307477_100682193	3300031753	Hardwood Forest Soil	MHSLFHSRAPELAPVVEPVQGQFPKVEDAEIAAASYGKRVAGDLYDSLRVSPERILFGLLDVAGRRQDNQAI
Ga0302319_107687742	3300031788	Bog	MCPLFQSRAPHPLPAIEPVPSEFPKINGAEIAAATYGQRVAGDFYDSLRVSPERILFGLLDVAGR
Ga0307479_107057331	3300031962	Hardwood Forest Soil	MCALFHARVAEPPPAVEPVPGEFPTIYGAEIAATTYGKRVAGDFYDSLRVSPERILFGLLDVAGRRESNQLILAAAQ
Ga0307479_113547671	3300031962	Hardwood Forest Soil	MHSLFHSRAPELAPVVEPVQGQFPKVEDAEIAAASYGKRVAGDLYDSLRVSPERILFGLLDVAGRRQDNQAILSAAQE
Ga0307479_116663491	3300031962	Hardwood Forest Soil	MCALFHSRVPEPPPAAEPVPSEFPRIDGAEIAATTYGMRVAGDFYDSLRVGPERILFGLLDVAGRRENNQSILAAATQVFRNVG
Ga0311301_103043881	3300032160	Peatlands Soil	MCALFQSRVPDPLLPLEPATSEFPKIEGAEIAATTYGKRVAGDFYDSLRVSPERVLFGLLDVAGRRESNQIILSAAQNMFRTL
Ga0335074_103793792	3300032895	Soil	MHPLFRQRSQVLAIEPLPAVFPTIRGAEIAASVIGHRVAGDFYDSLRVSPERILFGLLDVAGRREENASILAAAQQTFR
Ga0316214_10364002	3300033545	Roots	MCALSQPRVPDPQPSLEPAANGFPKIQGADIAASTYGKQVAGDFHDSLRVSPERILFGLLDVAGRRESNQAILSAAQSTFRTLGAELF
Ga0370483_0024233_1533_1811	3300034124	Untreated Peat Soil	MCALFHSREPEPPPSLEPETQEFPGIEGAEIAATTYGKRVAGDFYDSIRVSPERVLFGLLDVAGRREKNQTVLSAAQHLFRTVGAELFSCPDF
Ga0370483_0214565_409_654	3300034124	Untreated Peat Soil	MCSLFQAREPDPLPALEPVTSEFPKINGAEIAATTYGKRIAGDFYDSLRVGPERILFGLLDVAGRRENNQRILSAAQELFRT
Ga0370515_0245680_1_273	3300034163	Untreated Peat Soil	MCSLFHSDVPEPTAAVEPVPNEFPKIEGAEIAASTLGKRVAGDFFDSVRVSPERILFGLLDLAGRRESNQHILSVAQNIFRTRGTVLFAPP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092836

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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