Metagenome / Metatranscriptome Family F092884

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092884
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	70 residues
Representative Sequence	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDPIQWTRFNHEADNPMDSFDYKIMHELRLCPIKNEQ
Number of Associated Samples	72
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	13.08 %
% of genes near scaffold ends (potentially truncated)	26.17 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (38.318 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (27.103 % of family members)
Environment Ontology (ENVO)	Unclassified (85.047 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.196 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.87% β-sheet: 28.71% Coil/Unstructured: 58.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF08800	VirE_N	3.74
PF00436	SSB	2.80
PF08291	Peptidase_M15_3	1.87
PF12684	DUF3799	1.87
PF11697	DUF3293	0.93
PF02867	Ribonuc_red_lgC	0.93
PF00415	RCC1	0.93
PF08299	Bac_DnaA_C	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	2.80
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	2.80
COG5184	Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins	Cell cycle control, cell division, chromosome partitioning [D]	1.87
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.93
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.22 %
Unclassified	root	N/A	31.78 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	38.32 %
Unclassified	root	N/A	31.78 %
cellular organisms	root	All Organisms → cellular organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	38.32 %
Unclassified	root	N/A	31.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.91 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	38.32 %
Unclassified	root	N/A	31.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.30 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	38.32 %
Unclassified	root	N/A	31.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.30 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	38.32 %
Unclassified	root	N/A	31.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24.30 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	38.32 %
Unclassified	root	N/A	31.78 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	24.30 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	0.93 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	38.32 %
Unclassified	root	N/A	31.78 %
Parvibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum	24.30 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.93 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	38.32 %
Unclassified	root	N/A	31.78 %
unclassified Parvibaculum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum	24.30 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.93 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	38.32 %
Unclassified	root	N/A	31.78 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	24.30 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	0.93 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10031614	All Organisms → Viruses → Predicted Viral	2468	Open in IMG/M
3300000116\|DelMOSpr2010_c10133310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	877	Open in IMG/M
3300000949\|BBAY94_10058834	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300001450\|JGI24006J15134_10001748	All Organisms → cellular organisms → Bacteria	12230	Open in IMG/M
3300001827\|ACM21_1012593	All Organisms → Viruses → Predicted Viral	1630	Open in IMG/M
3300005613\|Ga0074649_1000371	Not Available	60342	Open in IMG/M
3300006025\|Ga0075474_10011419	All Organisms → Viruses → Predicted Viral	3376	Open in IMG/M
3300006026\|Ga0075478_10000330	Not Available	17380	Open in IMG/M
3300006026\|Ga0075478_10000520	Not Available	13893	Open in IMG/M
3300006026\|Ga0075478_10002021	Not Available	7348	Open in IMG/M
3300006026\|Ga0075478_10073863	All Organisms → Viruses → Predicted Viral	1101	Open in IMG/M
3300006027\|Ga0075462_10037046	All Organisms → Viruses → Predicted Viral	1564	Open in IMG/M
3300006737\|Ga0098037_1075267	All Organisms → Viruses → Predicted Viral	1190	Open in IMG/M
3300006737\|Ga0098037_1151278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	779	Open in IMG/M
3300006749\|Ga0098042_1095262	Not Available	758	Open in IMG/M
3300006749\|Ga0098042_1106891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	705	Open in IMG/M
3300006752\|Ga0098048_1004635	All Organisms → cellular organisms → Bacteria	5378	Open in IMG/M
3300006752\|Ga0098048_1014960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	2667	Open in IMG/M
3300006752\|Ga0098048_1186363	Not Available	614	Open in IMG/M
3300006752\|Ga0098048_1218957	Not Available	560	Open in IMG/M
3300006754\|Ga0098044_1299229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	616	Open in IMG/M
3300006802\|Ga0070749_10086428	All Organisms → Viruses → Predicted Viral	1868	Open in IMG/M
3300006802\|Ga0070749_10337952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	838	Open in IMG/M
3300006810\|Ga0070754_10030388	All Organisms → Viruses → Predicted Viral	3022	Open in IMG/M
3300006810\|Ga0070754_10077375	All Organisms → Viruses → Predicted Viral	1685	Open in IMG/M
3300006810\|Ga0070754_10192784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	953	Open in IMG/M
3300006869\|Ga0075477_10298525	Not Available	641	Open in IMG/M
3300006916\|Ga0070750_10000017	Not Available	59128	Open in IMG/M
3300006921\|Ga0098060_1025662	All Organisms → Viruses → Predicted Viral	1813	Open in IMG/M
3300006922\|Ga0098045_1030414	All Organisms → Viruses → Predicted Viral	1393	Open in IMG/M
3300006929\|Ga0098036_1281644	Not Available	501	Open in IMG/M
3300007864\|Ga0105749_1082074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	691	Open in IMG/M
3300007992\|Ga0105748_10207508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	816	Open in IMG/M
3300009071\|Ga0115566_10185459	All Organisms → Viruses → Predicted Viral	1279	Open in IMG/M
3300009071\|Ga0115566_10277406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	995	Open in IMG/M
3300009074\|Ga0115549_1167474	Not Available	709	Open in IMG/M
3300009076\|Ga0115550_1196048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	682	Open in IMG/M
3300009423\|Ga0115548_1116640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	860	Open in IMG/M
3300009433\|Ga0115545_1013132	All Organisms → Viruses → Predicted Viral	3560	Open in IMG/M
3300009433\|Ga0115545_1151821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	808	Open in IMG/M
3300009435\|Ga0115546_1081468	All Organisms → Viruses → Predicted Viral	1196	Open in IMG/M
3300009435\|Ga0115546_1212149	Not Available	668	Open in IMG/M
3300009472\|Ga0115554_1366632	Not Available	565	Open in IMG/M
3300009481\|Ga0114932_10775080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	556	Open in IMG/M
3300009508\|Ga0115567_10700860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	607	Open in IMG/M
3300010149\|Ga0098049_1004853	All Organisms → Viruses → Predicted Viral	4846	Open in IMG/M
3300010149\|Ga0098049_1028502	All Organisms → Viruses → Predicted Viral	1821	Open in IMG/M
3300010149\|Ga0098049_1055951	All Organisms → Viruses → Predicted Viral	1255	Open in IMG/M
3300010149\|Ga0098049_1095211	Not Available	933	Open in IMG/M
3300010300\|Ga0129351_1140265	Not Available	958	Open in IMG/M
3300012920\|Ga0160423_10080525	All Organisms → Viruses → Predicted Viral	2318	Open in IMG/M
3300017717\|Ga0181404_1149072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	564	Open in IMG/M
3300017744\|Ga0181397_1179982	Not Available	533	Open in IMG/M
3300017762\|Ga0181422_1004432	All Organisms → Viruses → Predicted Viral	4730	Open in IMG/M
3300017781\|Ga0181423_1033658	All Organisms → Viruses → Predicted Viral	2076	Open in IMG/M
3300017781\|Ga0181423_1352740	Not Available	535	Open in IMG/M
3300017818\|Ga0181565_10554047	Not Available	742	Open in IMG/M
3300017951\|Ga0181577_10080695	All Organisms → Viruses → Predicted Viral	2273	Open in IMG/M
3300017951\|Ga0181577_10299174	All Organisms → Viruses → Predicted Viral	1045	Open in IMG/M
3300018418\|Ga0181567_10332540	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300018420\|Ga0181563_10461492	Not Available	718	Open in IMG/M
3300018423\|Ga0181593_11217487	Not Available	507	Open in IMG/M
3300018642\|Ga0188867_1000330	All Organisms → Viruses → Predicted Viral	1822	Open in IMG/M
3300020392\|Ga0211666_10259179	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300020442\|Ga0211559_10000668	Not Available	21291	Open in IMG/M
3300020442\|Ga0211559_10237813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	855	Open in IMG/M
3300020474\|Ga0211547_10247767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	909	Open in IMG/M
3300021364\|Ga0213859_10505274	Not Available	524	Open in IMG/M
3300021368\|Ga0213860_10430960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	569	Open in IMG/M
3300022057\|Ga0212025_1026641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	960	Open in IMG/M
3300022068\|Ga0212021_1007310	All Organisms → Viruses → Predicted Viral	1765	Open in IMG/M
3300022074\|Ga0224906_1134439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	707	Open in IMG/M
3300022074\|Ga0224906_1155361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	644	Open in IMG/M
3300022187\|Ga0196899_1001656	Not Available	10831	Open in IMG/M
3300022187\|Ga0196899_1170415	Not Available	593	Open in IMG/M
3300023180\|Ga0255768_10227908	All Organisms → Viruses → Predicted Viral	1098	Open in IMG/M
3300025070\|Ga0208667_1005240	All Organisms → Viruses → Predicted Viral	3525	Open in IMG/M
3300025070\|Ga0208667_1012384	All Organisms → Viruses → Predicted Viral	1885	Open in IMG/M
3300025083\|Ga0208791_1013617	All Organisms → Viruses → Predicted Viral	1818	Open in IMG/M
3300025083\|Ga0208791_1017703	All Organisms → Viruses → Predicted Viral	1504	Open in IMG/M
3300025086\|Ga0208157_1073058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	871	Open in IMG/M
3300025086\|Ga0208157_1122241	Not Available	603	Open in IMG/M
3300025098\|Ga0208434_1034525	Not Available	1173	Open in IMG/M
3300025098\|Ga0208434_1065318	Not Available	766	Open in IMG/M
3300025102\|Ga0208666_1136777	Not Available	562	Open in IMG/M
3300025127\|Ga0209348_1130058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	755	Open in IMG/M
3300025127\|Ga0209348_1203962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	550	Open in IMG/M
3300025151\|Ga0209645_1042112	All Organisms → Viruses → Predicted Viral	1635	Open in IMG/M
3300025610\|Ga0208149_1003764	All Organisms → cellular organisms → Bacteria	5129	Open in IMG/M
3300025610\|Ga0208149_1065762	Not Available	912	Open in IMG/M
3300025632\|Ga0209194_1042402	All Organisms → Viruses → Predicted Viral	1353	Open in IMG/M
3300025632\|Ga0209194_1058544	All Organisms → Viruses → Predicted Viral	1075	Open in IMG/M
3300025653\|Ga0208428_1015608	All Organisms → Viruses → Predicted Viral	2563	Open in IMG/M
3300025671\|Ga0208898_1031641	All Organisms → Viruses → Predicted Viral	2147	Open in IMG/M
3300025769\|Ga0208767_1000285	Not Available	38918	Open in IMG/M
3300025816\|Ga0209193_1024560	All Organisms → Viruses → Predicted Viral	1868	Open in IMG/M
3300025853\|Ga0208645_1101919	All Organisms → Viruses → Predicted Viral	1187	Open in IMG/M
3300028022\|Ga0256382_1020029	All Organisms → Viruses → Predicted Viral	1408	Open in IMG/M
3300029318\|Ga0185543_1000004	Not Available	64712	Open in IMG/M
3300029318\|Ga0185543_1032961	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300029318\|Ga0185543_1100325	Not Available	559	Open in IMG/M
3300029319\|Ga0183748_1000191	Not Available	39467	Open in IMG/M
3300029319\|Ga0183748_1010879	All Organisms → Viruses → Predicted Viral	3770	Open in IMG/M
3300029319\|Ga0183748_1082021	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	792	Open in IMG/M
3300029319\|Ga0183748_1094400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	701	Open in IMG/M
3300029448\|Ga0183755_1057988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	933	Open in IMG/M
3300029792\|Ga0183826_1034225	Not Available	798	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Algae	Host-Associated → Algae	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.20%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.93%
Green Algae	Host-Associated → Algae → Green Algae	0.93%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	28.97%
Coastal	Environmental → Aquatic → Marine → Coastal	26.17%
Pelagic	Environmental → Aquatic → Marine → Pelagic	14.02%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.15%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.54%
Strait	Environmental → Aquatic → Marine → Strait	6.54%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.93%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.93%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	28.04%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	26.17%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	14.02%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.15%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.54%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.54%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.93%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.93%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.93%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.93%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	27.10%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	21.50%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	13.08%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	12.15%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	6.54%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.54%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.87%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.87%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.93%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.93%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.93%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.93%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.93%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.93%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.93%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001827	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM21, ROCA_DNA110_2.0um_23k	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007864	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018642	Metatranscriptome of marine microbial communities from Baltic Sea - GS695_0p1	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100316144	3300000116	Marine	MTKKELIDLMAGYPDDASVVIEVHDTSLHEDLYDFTFDAISWNRFDNTTSNPMDAFDYKEMHELRLTAINHNEK*
DelMOSpr2010_101333104	3300000116	Marine	MTKKQLLDLIAEYPDSAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNHNASNPMDAFDYKTMYELRLCPIKNEQ*
BBAY94_100588342	3300000949	Macroalgal Surface	MTKKNLLDLLSAYPDDSEVVIEVHDTALHEDLYDFTLDPIQWTRFDFNKDSHETMHELRLCPIKHTND*
JGI24006J15134_1000174824	3300001450	Marine	MTKKQLLDLLSKYPDSAEVVIEVHDTELHEDLYDFTLDPIQMTRFNTETSNPMDAFDYKTMYELRLCPIKNEQ*
ACM21_10125936	3300001827	Marine Plankton	MTKKQLLDLIAEYPDDAEVVVEVHDTTLNEDLYDFTLDPIQWARFNHEADNPMDAFDYKIMYELRLCPIKNEQ*
Ga0074649_100037177	3300005613	Saline Water And Sediment	MTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPISWARFDNTTDNPMDSFDYKTMHELRLCPIKNTIIE*
Ga0075474_100114193	3300006025	Aqueous	MTKKQLLKLLAPYPDRAEVVIEVHDTTLYEDLYNFEFDPIEWEQFEGLTREPTTMYELRLCPIKNKQTQS*
Ga0075478_1000033022	3300006026	Aqueous	MTKKQLLDLIAEYPDNAEVVIEVHDTTLNEDLYDFTLDPISWTRFNTDNTSENMHELRLCPIQTQEQ*
Ga0075478_1000052020	3300006026	Aqueous	MTKKQLLDLIAEYPDHAEVVIEVHDTTLHEDLYDFTLDPISWRFPDGTSTELQMHELRLCPIQNNNE*
Ga0075478_100020213	3300006026	Aqueous	MTKKQLLDLIAQYPDNAEVVIEVHDTELHEDLYDFTLDPIQWTRFNFNEDSHETMYELRLCPIKNTND*
Ga0075478_100738636	3300006026	Aqueous	MTKKELIGLMAGYPDDASVVIEVHDTSLHEDLYDFTFDAISWNRFDNTTSNPMDAFDYKEMHELRLTAINHNEK*
Ga0075462_100370463	3300006027	Aqueous	MTKKQLLDLISEYPDHAEVVIEVHDTTLHEDLYDFTLDPISWRFPDGTSTELQMHELRLCPIQNNNE*
Ga0098037_10752671	3300006737	Marine	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEADNPMDSFDYKI
Ga0098037_11512782	3300006737	Marine	MTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEADNPMDSFDYKIMYELRLCPIKNEQ*
Ga0098042_10952624	3300006749	Marine	TNRLTKCITTTLKTMTKKELLDLIAQYPDDAEVVIEVHDTTLHEDLYNFTLDPISWTRFDTTTDNPMDSFDYKTMHELRLCPIKNEQ*
Ga0098042_11068911	3300006749	Marine	MTKKELLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEAANPMDSFDYKIMYELRLCPIKN
Ga0098048_100463515	3300006752	Marine	MTKKELLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPISWTRFEGLSREHTEMHELRLCPIKHTND*
Ga0098048_10149606	3300006752	Marine	MTKKELLKLLASYPDDAEVVIEVHDTVLHEDLYNFTFDPIEQEQFEGLTVEPTIMYELRLCPIKNTIK*
Ga0098048_11863633	3300006752	Marine	MTKAELLDALREYPDDSVVVIEVHDTTLHEDLYDFTLDPVSWSRFEGLSREDTEMHELRLCPIKNTIK*
Ga0098048_12189572	3300006752	Marine	MTKKELLDLIEEYPDDAEVVIEVHDTTLHEDLYDFTLDPISWDRFNTNTDNPMDSFDYKTMYELRLCPIKNEQ*
Ga0098044_12992293	3300006754	Marine	MTKKQLLDLILDYPDNSEVVIEVHDTTLHEDLYDFTLDPISWTRFEGLTREHTEMHELRLCPIKHTND*
Ga0070749_100864282	3300006802	Aqueous	MTKKQLLKLLAPYPDRAEIVIEVHDTTLHEDLYNFTFDPIEWEQFEGLTREPTTMYELRLCPIKNTND*
Ga0070749_103379521	3300006802	Aqueous	MTKKQLLDLISEYPDHAEVVIEVHDTTLHEDLYDFTLDPISWRFPDGTSTELQMHELRLC
Ga0070754_100303885	3300006810	Aqueous	MTKKELLKLLAPYPDRAEIVIEVHDTTLNEDLYNFTFDPIEWEQFEGLTREPTTMYELRLCPIQNNND*
Ga0070754_100773753	3300006810	Aqueous	MTKAELLDALREYPDDSVVVIEVHDTTLHEDLYDFTLDPISWSRFEGLTREHTEMHELRLCPIKNTIK*
Ga0070754_101927842	3300006810	Aqueous	MTTKELLKLLAPYTDRAEVVIEVHDTTLNEDLYNFTFDPVSWKRFDFKENTEEQMHELRLCPIKNT*
Ga0075477_102985253	3300006869	Aqueous	QLLKLLAPYPDRAEIVIEVHDTTLHEDLYNFTFDPIEWEQFEGLTREPTTMYELRLCPIKNTND*
Ga0070750_1000001746	3300006916	Aqueous	MNCTTNTLKTMTKKQLLDLIAQYPDNAEVVIEVHDTELHEDLYDFTLDPIQWTRFNFNEDSHETMYELRLCPIKNTND*
Ga0098060_10256621	3300006921	Marine	MTKKQLLDLISQYPDDAEVVIEVHDTALNEDLYDFTLDPIQLTRFNHEADNPMDSFDYKIMYELRLCPIKNEQ*
Ga0098045_10304141	3300006922	Marine	MTKKELLKLLEPYPDHAEVVIEVHDTVLHEDLYNFTFDPTEWEQFEGLTVEPTIMYELRLCPIKNTIK*
Ga0098036_12816443	3300006929	Marine	DYPDNSEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEADNPMDSFDYKIMYELRLCPIKNEQ*
Ga0105749_10820743	3300007864	Estuary Water	SEYPDSSEVVIEVHDTELHEDLYDFTLDPIQMTRFNTETSNPMDAFNYKTMYELRLCPIKNEQ*
Ga0105748_102075083	3300007992	Estuary Water	MTKKQLLDLLSEYPDSSEVVIEVHDTELHEDLYDFTLDPIQMTRFNTETSNPMDAFNYKTMYELRLCPIKNEQ*
Ga0115566_101854595	3300009071	Pelagic Marine	MTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEADNPMDSFDYKTVYELRLCPIKNEQ*
Ga0115566_102774063	3300009071	Pelagic Marine	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNTESSNPMDSFDYKT
Ga0115549_11674741	3300009074	Pelagic Marine	YPDDAEVVIEVHDTTIHEDLYDFTLDGYSWNRFNTESSNPMDSFDYKTMYELRLCPIQNNNE*
Ga0115550_11960482	3300009076	Pelagic Marine	MTKKQLLDLIAQYPNDAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNTESSNPMDSFDYKTMYELRLCPIQNNNE*
Ga0115548_11166403	3300009423	Pelagic Marine	MTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNTESSNPMDSFDYKTMYELRLCPIQNNNE*
Ga0115545_10131323	3300009433	Pelagic Marine	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNTESSNPMDSFDYKTMYELRLCPIQNNNE*
Ga0115545_11518212	3300009433	Pelagic Marine	MTKKELLKLLAPYTDDAEVVIEVHDTTLNEDLYNFTFDPIEWKRFNFDSNTEEQMHELRLCPIQNNNE*
Ga0115546_10814682	3300009435	Pelagic Marine	MTKKELLKLLAPYPDDAEVVIEVHDTTLNEDLYNFTFDPIEWKRFNFDSNTEEQMHELRLCPIQNNNE*
Ga0115546_12121492	3300009435	Pelagic Marine	MTKKELLDLIAEYPDSAEVVIEVHDTTLHEDLYDFTLDPIQWTRFNHEADNPMDSFDYKTVYELRLCPIKNEQ*
Ga0115554_13666321	3300009472	Pelagic Marine	YPDDAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNHNASNPMDAFDYKTMYELRLCPIKNTNNND*
Ga0114932_107750802	3300009481	Deep Subsurface	MTKKQLLELIAEYPDSAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNTESSNPMDSFDYKTMYELRLCPIKNEQ*
Ga0115567_107008602	3300009508	Pelagic Marine	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDGYSCNRFNTESSNPMDSFDYKTMYEL
Ga0098049_10048534	3300010149	Marine	MTKKELLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPISWDRFNTNTDNPMDSFDYKTMYELRLCPIKNEQ*
Ga0098049_10285021	3300010149	Marine	ELLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPISWTRFEGLSREHTEMHELRLCPIKHTND*
Ga0098049_10559512	3300010149	Marine	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEAANPMDSFDYKIMYELRLCPIKNEQ*
Ga0098049_10952112	3300010149	Marine	MTKKELLKLLEPYPDHAEVVIEVHDTVLHEDLYNFTFDPTEWEQFEGLTREPTTMYELRLCPIKNTIN*
Ga0129351_11402652	3300010300	Freshwater To Marine Saline Gradient	MTKKQLLDLISDYPDNAEVVIEVHDTTLHEDLYDFTLDPISWTRLHTNGTSTGLQMHELRLCPIKNTND*
Ga0160423_100805256	3300012920	Surface Seawater	MTKKQLLELLAQYPDDAEIVIDVHDTVLHEDLYDFTLEPVTWFRFDNETDNPMDSFDYKIMHELRLCPTKNEQ*
Ga0181404_11490723	3300017717	Seawater	MTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEADNPMDSFDYKIMYELRLCPTKNEQWEKKPYTTGAA
Ga0181397_11799823	3300017744	Seawater	MTKAELIDALREYPDEAEVVIEVHDTTLHEDLYDFKLDPISLHFTDGTSTGLQMH
Ga0181422_10044328	3300017762	Seawater	MTKKELLKLLEPYPDHAEVVIEVHDTVLHEDLYNFTFDPTEWEQFEGLTREPTTMYELRLCPIKNTIN
Ga0181423_10336584	3300017781	Seawater	MTKKQLLDLIAEYPDDAEVVIEVHDTTLYEDLYDFKLDPISLHFTDGTSTGLQMHELRLCPIKNNQ
Ga0181423_13527401	3300017781	Seawater	MTKKQLLDIIEEYPDDAEVVIEVHDTTLHEDLYDFTLDPISLHFTDGTSTGLQIHELRLCPIKNNQA
Ga0181565_105540473	3300017818	Salt Marsh	MTKKQLLDLISDYPDNAQVVVEVHDTTLHEDLYDFTLDPISWRFPDGTSTELQMHELRLCPIQNNNE
Ga0181577_100806956	3300017951	Salt Marsh	MTKKQLLDLIAEYPDDAEIVINVHDTVLYEDLYDFTVDPISWFRFDRETKNPMDSFDYKTMHELQLCPIKNTND
Ga0181577_102991743	3300017951	Salt Marsh	MTKKQLLDLISEYPDHAEVVIEVHDTTLHEDLYDFTLDPISWRFPDGTSTELQMHELRLCPIQNNNE
Ga0181567_103325401	3300018418	Salt Marsh	TLQQTKSLTNCITNTLKTMTKKQLLDLISEYPDHAEVVIEVHDTTLHEDLYDFTLDPISWRFPDGTSTELQMHELRLCPIQNNNE
Ga0181563_104614922	3300018420	Salt Marsh	MTKKQLLDLIAQYPDDAEVVIEVHDTTLNEDLYDFTLDPIQWVRFDNESTNPMDSFNYEYRHELRLCPIKNTND
Ga0181593_112174873	3300018423	Salt Marsh	MTKKQLLDLIAEYPDNAEVVIEVHDTTLHEDLYDFTLDPISWKRFDFKTNTEEQMHELRLCPIQNNNE
Ga0188867_10003301	3300018642	Freshwater Lake	PDPKTLTAMTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPIQWTRFNHEADNPMDSFDYKIMYELRLCPIKNEQ
Ga0211666_102591791	3300020392	Marine	MTKKELIDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPIQWARFDNTTDNPMDAFDYKIMHELRLCPIKNEQ
Ga0211559_1000066829	3300020442	Marine	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDPIQWTRFNHEADNPMDSFDYKIMHELRLCPIKNEQ
Ga0211559_102378132	3300020442	Marine	MTKKQLLDLIAQYPDDAEIVIEVHDTTLHEDLYDFTLDPISWARFDNETDNPMDSFNYKTMHELRLCPIEHNNE
Ga0211547_102477672	3300020474	Marine	MTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEADNPMDSFDYKIMYELRLCPIKNEQ
Ga0213859_105052743	3300021364	Seawater	AEYPDDSEVVIEVHDTTLNEDLYDFTLDPIQWVRFDNESTNPMDSFNYEYRHELRLCPIQNNNE
Ga0213860_104309601	3300021368	Seawater	MTKKQLLDLIAEYPDYAEIVIEVHDTTLHEDLYDFTLDPISWTRFHTNGTSTGLQMHELRLCPIKNTND
Ga0212025_10266413	3300022057	Aqueous	MTKKQLLKLLAPYPDRAEVVIEVHDTTLYEDLYNFEFDPIEWEQFEGLTREPTTMY
Ga0212021_10073104	3300022068	Aqueous	MTKKELIGLMAGYPDDASVVIEVHDTSLHEDLYDFTFDAISWNRFDNTTSNPMDAFDYKEMHELRLTAINHNEKX
Ga0224906_11344391	3300022074	Seawater	MTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPISWARFDNTTDNPMDSFNYKTMHELRLCPIKNEQ
Ga0224906_11553612	3300022074	Seawater	MTKKQLLDLIAEYPDDAEVVIEVHDTTLYEDLYDFTLDPISLHFTDGTSTGLQIHELRLCPIKNNQA
Ga0196899_100165615	3300022187	Aqueous	MTKKQLLDLIAEYPDNAEVVIEVHDTTLNEDLYDFTLDPISWTRFNTDNTSENMHELRLCPIQTQEQ
Ga0196899_11704152	3300022187	Aqueous	MTKAELLDALREYPDDSVVVIEVHDTTLHEDLYDFTLDPISWSRFEGLTREHTEMHELRLCPIKNTIK
Ga0255768_102279082	3300023180	Salt Marsh	MTKKQLLDLISDYPDNAEVVVEVHDTTLHEDLYDFKLDPISWKRFDFKTNTEEQMHELRLCPIQNNNE
Ga0208667_10052401	3300025070	Marine	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEAANPMDSFDYKIMYELRLCPIKNEQ
Ga0208667_10123843	3300025070	Marine	MTKKELLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPISWTRFEGLTREHTEMHELRLCPIKHTND
Ga0208791_10136174	3300025083	Marine	MTKKELLKLLEPYPDHAEVVIEVHDTVLHEDLYNFTFDPTEWEQFEGLTVEPTIMYELRLCPIKNTIK
Ga0208791_10177034	3300025083	Marine	MTKKELLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPISWTRFEGLSREHTEMHELRLCPIKHTND
Ga0208157_10730583	3300025086	Marine	MLSVSPNPKTLTAMTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPISWTRFEGLTREHTEMHELRLCPIKHTND
Ga0208157_11222413	3300025086	Marine	MTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEADNPMDSFDYKTMYELRLCPIKNEQ
Ga0208434_10345251	3300025098	Marine	MLKLLEPYPDHAEVVIEVHDTVLHEDLYNFTFDPIEQEQFEGLTVEPTIMYELRLCPIKNTIK
Ga0208434_10653182	3300025098	Marine	MTKAELLDALREYPDDSVVVIEVHDTTLHEDLYDFTLDPVSWSRFEGLSREDTEMHELRLCPIKNTIK
Ga0208666_11367773	3300025102	Marine	DAEVVIEVHDTTLHEDLYDFTLDPIQLTRFNHEADNPMDSFDYKTMYELRLCPIKNEQ
Ga0209348_11300582	3300025127	Marine	MTKKELIDLMAGYPDDASVVIEVHDTSLHEDLYDFTFDAISWNRFDNTTSNPMDAFDYKEMHELRLTAINHNEK
Ga0209348_12039621	3300025127	Marine	MTKKQLLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPISWARFDNTTDNPMDSFDYKTMHELRLCPIKNEQ
Ga0209645_10421122	3300025151	Marine	MTKKQLLDLIAQYPDNAEVVIEVHDTTLHEDLYDFTLDPISWDRFNTTTDNPMDSFDYKTMHELRLCPIKHTNE
Ga0208149_10037647	3300025610	Aqueous	MTKKQLLDLIAQYPDNAEVVIEVHDTELHEDLYDFTLDPIQWTRFNFNEDSHETMYELRLCPIKNTND
Ga0208149_10657621	3300025610	Aqueous	MTKKELIGLMAGYPDDASVVIEVHDTSLHEDLYDFTFDAISWNRFDNTTSNPMDAFDYKEMHELRLTAINHNEK
Ga0209194_10424027	3300025632	Pelagic Marine	PDDAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNTESSNPMDSFDYKTMYELRLCPIQNNN
Ga0209194_10585442	3300025632	Pelagic Marine	MTKKELLDLIAQYPDDAEVVIEVHDTTLHEDLYDFTLDPIQWTRFNHEADNPMDSFDYKTVYELRLCPIKNEQ
Ga0208428_10156087	3300025653	Aqueous	MTKKQLLKLLAPYPDRAEIVIEVHDTTLHEDLYNFTFDPIEWEQFEGLTREPTTMYELRLCPIKNTND
Ga0208898_10316414	3300025671	Aqueous	MTKKQLLKLLAPYPDRAEVVIEVHDTTLYEDLYNFEFDPIEWEQFEGLTREPTTMYELRLCPIKNKQTQS
Ga0208767_100028516	3300025769	Aqueous	MNCTTNTLKTMTKKQLLDLIAQYPDNAEVVIEVHDTELHEDLYDFTLDPIQWTRFNFNEDSHETMYELRLCPIKNTND
Ga0209193_10245607	3300025816	Pelagic Marine	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNTESSNPMDSFDYKTMYELRLCPIQNNNE
Ga0208645_11019194	3300025853	Aqueous	MTKKELLKLLAPYPDRAEIVIEVHDTTLNEDLYNFTFDPIEWEQFEGLTREPTTMYELRLCPIQNNND
Ga0256382_10200296	3300028022	Seawater	MTKKQLLDLIAEYPDDAEVVIEVHDTTLYEDLYDFTLDPISWKRFEGLTREDTEMHELRLCPIKNDQ
Ga0185543_100000424	3300029318	Marine	MTKKQLLDLIAQYPDDADIMIDIHDTVLYEDLYDFTFEPVSWTRFHTDNTSEQMHELRLCPIEHTNE
Ga0185543_10329614	3300029318	Marine	MTKKQLLDLIAQYPDDAEVVIEVHDTTLYEDLYDFTLDPIEWNRFDFGGGQPQKTMHELRLCPIKNTND
Ga0185543_11003251	3300029318	Marine	DDAEVVIEVHDTELHEDLYDFTLDPIQWARFDNETDNPMDSFDYKIMYELRLCPIKNEQ
Ga0183748_100019129	3300029319	Marine	MTFNRFWTPFTNSKTNAMTKKQLADLIAEYPDDAEVVIEVHDTALYEDLYDFTFDPISWTRIDGNQMTNMHELRLCPIKHTNDDNQ
Ga0183748_10108797	3300029319	Marine	MTKKQLLDLIAEYPDDSEVVIEVHDTTLYEDLYDFTLDPIQWTRFNTETDNPMDSFDYKTMYELRLCPIKNEQ
Ga0183748_10820213	3300029319	Marine	MTKKQLLKLLAPYPDRAEVVIMVHDTTLYEDLYDFEFDPIEWERFDFDSDTQEQMYELRLCPIEHNNDE
Ga0183748_10944001	3300029319	Marine	MTKKQLLDLIAEYPDDSEVVIDVHDTTLYEDLYDFTLDPIQWTRFNHESDNLMDSFDYKTMYELRLCPIKNEQ
Ga0183755_10579882	3300029448	Marine	MTKKQLLDLIAEYPDDAEVVIEVHDTTLHEDLYDFTLDGYSWNRFNTESSNPMDAFDYKTIYELRLCPIQNNND
Ga0183826_10342252	3300029792	Marine	MTKKELLDLIAEYPDDAEVVIEVHDTTLYEDLYDFTLDPIQWTRFDFKEDSHETMYELRLCPIKNEQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092884

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences