Metagenome / Metatranscriptome Family F092949

Basic Information
Family ID	F092949
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	81 residues
Representative Sequence	MAASSSSSSAGSSRADELWRRVGEAAGPVGELTPLLEKVRDTAWKITDADVAGLDADALYEAVLPVAFAAADAKRRRAHEAIDAG
Number of Associated Samples	82
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.19 %
% of genes near scaffold ends (potentially truncated)	20.56 %
% of genes from short scaffolds (< 2000 bps)	73.83 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Most Common Taxonomy
Group	Bacteria (64.486 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (13.084 % of family members)
Environment Ontology (ENVO)	Unclassified (18.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.318 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.75% β-sheet: 0.00% Coil/Unstructured: 44.25%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
a.152.1.3: Atu0492-like	d3c1la_	3c1l	0.67264
f.38.1.2: LacY-like proton/sugar symporter	d6vbga_	6vbg	0.6245
a.152.1.3: Atu0492-like	d2gmya1	2gmy	0.61998
f.41.1.0: automated matches	d5awwy_	5aww	0.61763
d.25.1.1: Mitochondrial glycoprotein MAM33-like	d1p32a_	1p32	0.59175

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00694	Aconitase_C	64.49
PF02133	Transp_cyt_pur	3.74
PF09678	Caa3_CtaG	1.87
PF12804	NTP_transf_3	0.93
PF00202	Aminotran_3	0.93
PF00300	His_Phos_1	0.93
PF02567	PhzC-PhzF	0.93
PF13560	HTH_31	0.93
PF00355	Rieske	0.93
PF13646	HEAT_2	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.49 %
Unclassified	root	N/A	35.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.49 %
Unclassified	root	N/A	35.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.49 %
Unclassified	root	N/A	35.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.69 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	18.69 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.69 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.69 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10343647	Not Available	527	Open in IMG/M
3300004479\|Ga0062595_101406709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300005434\|Ga0070709_10258220	Not Available	1258	Open in IMG/M
3300005434\|Ga0070709_10488188	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005435\|Ga0070714_101128038	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005435\|Ga0070714_102390414	Not Available	513	Open in IMG/M
3300005439\|Ga0070711_101061996	Not Available	697	Open in IMG/M
3300005445\|Ga0070708_101021826	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005454\|Ga0066687_10014420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3154	Open in IMG/M
3300005454\|Ga0066687_10351253	Not Available	845	Open in IMG/M
3300005468\|Ga0070707_101272643	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005471\|Ga0070698_100751101	Not Available	918	Open in IMG/M
3300005529\|Ga0070741_10115272	All Organisms → cellular organisms → Bacteria	2795	Open in IMG/M
3300005529\|Ga0070741_10153033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2313	Open in IMG/M
3300005529\|Ga0070741_11096774	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005532\|Ga0070739_10007747	All Organisms → cellular organisms → Bacteria	11251	Open in IMG/M
3300005534\|Ga0070735_10089666	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300005536\|Ga0070697_101813420	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005538\|Ga0070731_10034935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3390	Open in IMG/M
3300005538\|Ga0070731_10983640	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005542\|Ga0070732_10063555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2145	Open in IMG/M
3300005542\|Ga0070732_10114979	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300005560\|Ga0066670_10491324	Not Available	755	Open in IMG/M
3300005566\|Ga0066693_10264276	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005578\|Ga0068854_101484491	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005587\|Ga0066654_10592624	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005614\|Ga0068856_102045483	Not Available	583	Open in IMG/M
3300005892\|Ga0075275_1016253	Not Available	1040	Open in IMG/M
3300005897\|Ga0075281_1048133	Not Available	664	Open in IMG/M
3300005900\|Ga0075272_1103245	Not Available	549	Open in IMG/M
3300006028\|Ga0070717_10402557	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300006034\|Ga0066656_10528830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300006173\|Ga0070716_100222505	Not Available	1269	Open in IMG/M
3300006173\|Ga0070716_100500690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300006806\|Ga0079220_11144958	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300006903\|Ga0075426_10490933	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300006914\|Ga0075436_100296040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1159	Open in IMG/M
3300010373\|Ga0134128_11039523	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300010866\|Ga0126344_1174307	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300010877\|Ga0126356_10695500	Not Available	794	Open in IMG/M
3300010877\|Ga0126356_10716152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1137	Open in IMG/M
3300010877\|Ga0126356_11341929	Not Available	692	Open in IMG/M
3300010880\|Ga0126350_11194287	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300010880\|Ga0126350_11319348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1567	Open in IMG/M
3300010880\|Ga0126350_12371862	Not Available	718	Open in IMG/M
3300012982\|Ga0168317_1000103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63927	Open in IMG/M
3300013307\|Ga0157372_12246236	Not Available	627	Open in IMG/M
3300017924\|Ga0187820_1013061	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300017924\|Ga0187820_1024163	Not Available	1547	Open in IMG/M
3300017924\|Ga0187820_1086399	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300017930\|Ga0187825_10247706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300017937\|Ga0187809_10051193	Not Available	1333	Open in IMG/M
3300017937\|Ga0187809_10195045	Not Available	716	Open in IMG/M
3300017939\|Ga0187775_10160757	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300017961\|Ga0187778_10965824	Not Available	588	Open in IMG/M
3300017966\|Ga0187776_10633486	Not Available	749	Open in IMG/M
3300017994\|Ga0187822_10021280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1661	Open in IMG/M
3300018032\|Ga0187788_10519130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300019888\|Ga0193751_1000871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	20848	Open in IMG/M
3300021372\|Ga0213877_10107521	Not Available	853	Open in IMG/M
3300021441\|Ga0213871_10010787	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300021441\|Ga0213871_10245328	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300025664\|Ga0208849_1078839	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300025910\|Ga0207684_10373491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1227	Open in IMG/M
3300025915\|Ga0207693_10596595	Not Available	860	Open in IMG/M
3300025928\|Ga0207700_10031918	All Organisms → cellular organisms → Bacteria	3748	Open in IMG/M
3300025929\|Ga0207664_10013653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5837	Open in IMG/M
3300025929\|Ga0207664_11732565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300025939\|Ga0207665_10815448	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300025981\|Ga0207640_10261718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1348	Open in IMG/M
3300025982\|Ga0208139_1045858	Not Available	509	Open in IMG/M
3300025990\|Ga0208527_1002491	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300026022\|Ga0208649_1008237	Not Available	839	Open in IMG/M
3300026312\|Ga0209153_1226078	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300026527\|Ga0209059_1231456	Not Available	619	Open in IMG/M
3300027568\|Ga0208042_1121449	Not Available	658	Open in IMG/M
3300027773\|Ga0209810_1066919	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300027869\|Ga0209579_10001974	All Organisms → cellular organisms → Bacteria	16261	Open in IMG/M
3300027869\|Ga0209579_10002391	All Organisms → cellular organisms → Bacteria	14481	Open in IMG/M
3300027869\|Ga0209579_10107781	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300027905\|Ga0209415_10004919	All Organisms → cellular organisms → Bacteria	24286	Open in IMG/M
3300028666\|Ga0265336_10014405	Not Available	2621	Open in IMG/M
3300028666\|Ga0265336_10058668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1155	Open in IMG/M
3300028800\|Ga0265338_10007637	All Organisms → cellular organisms → Bacteria	13344	Open in IMG/M
3300028800\|Ga0265338_10037384	All Organisms → cellular organisms → Bacteria	4621	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10056596	Not Available	1027	Open in IMG/M
3300031241\|Ga0265325_10040274	Not Available	2454	Open in IMG/M
3300031249\|Ga0265339_10016694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4368	Open in IMG/M
3300031250\|Ga0265331_10364331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300031670\|Ga0307374_10061554	All Organisms → cellular organisms → Bacteria	3700	Open in IMG/M
3300031712\|Ga0265342_10168936	Not Available	1205	Open in IMG/M
3300031712\|Ga0265342_10302757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	842	Open in IMG/M
3300031753\|Ga0307477_10080148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2263	Open in IMG/M
3300031754\|Ga0307475_10048861	All Organisms → cellular organisms → Bacteria	3170	Open in IMG/M
3300031754\|Ga0307475_10332613	Not Available	1220	Open in IMG/M
3300031910\|Ga0306923_11955733	Not Available	597	Open in IMG/M
3300031962\|Ga0307479_10270909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1678	Open in IMG/M
3300032180\|Ga0307471_103241393	Not Available	577	Open in IMG/M
3300032783\|Ga0335079_10255420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1926	Open in IMG/M
3300032805\|Ga0335078_10124181	Not Available	3689	Open in IMG/M
3300032805\|Ga0335078_10144343	All Organisms → cellular organisms → Bacteria	3376	Open in IMG/M
3300032828\|Ga0335080_10643673	Not Available	1110	Open in IMG/M
3300032828\|Ga0335080_11398873	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300032892\|Ga0335081_12717800	Not Available	505	Open in IMG/M
3300032893\|Ga0335069_11158966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300033134\|Ga0335073_11400783	Not Available	683	Open in IMG/M
3300033233\|Ga0334722_10059341	All Organisms → cellular organisms → Bacteria	2986	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.11%
Host-Associated	Host-Associated	15.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.64%
Plants	Host-Associated → Plants	15.89%
Aquatic	Environmental → Aquatic	7.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.08%
Freshwater	Environmental → Aquatic → Freshwater	7.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Geologic	Environmental → Terrestrial → Geologic	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.82%
Loam	Environmental → Terrestrial → Soil → Loam	16.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.80%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Clay	Environmental → Terrestrial → Soil → Clay	0.93%
Mine	Environmental → Terrestrial → Geologic → Mine	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.08%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	12.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.54%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	6.54%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	5.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.93%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300005900	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025982	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_105 (SPAdes)	Environmental	Open in IMG/M
3300025990	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102 (SPAdes)	Environmental	Open in IMG/M
3300026022	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103436471	3300001356	Peatlands Soil	MAASSSSSSAASSRTDDLWHRVGEAVGPVGEMTPLLGKVRDCAWRITDADVEGLDADALYEAVLPVAFAAADAKRRAAYEALG*
Ga0062595_1014067091	3300004479	Soil	SSSSSAGSSPADELWRAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAVADGKRRRAHEAIDAG*
Ga0070709_102582202	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSSSSSDVCLRTEELWRRVGAAAGPMGEMTPLLEKVRDCAWKITDADVAGLETDELYAAVLPVAFAVADGKRRRAYEAIDAG*
Ga0070709_104881882	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSSSSSAGSSPADELWRAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADAKRRRAHEAIDAG*
Ga0070714_1011280382	3300005435	Agricultural Soil	MAASSSSSSAGSSPADELWRAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADGKRRRAHEAIDAG*
Ga0070714_1023904141	3300005435	Agricultural Soil	MAASSSSSSAGSSPTDELWRAVGEAAGPVGGMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADAKRRRAHEAIDAG*
Ga0070711_1010619962	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSSSSSAGSSRADELWRAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAVDGKRRRAHEAIDAG*
Ga0070708_1010218262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VESSSSSFAGFSRTELWRRVGEAVGPTQNRPELEPLLDKVRNHAWRITDADVAGLDADALYEAVLPVAFAVAEEQRRRALEAIG*
Ga0066687_100144202	3300005454	Soil	MAASSSSSSAGSSRAEALWRRVGAAVGPAGEMTPLLEKVRDCAWRITDADVDGLDADALYEVVLPVAFAAADEKRGRAREAIDAG*
Ga0066687_103512532	3300005454	Soil	MAASSSSSSAGSSRADELWRRVGEAAGPVGELTPLLEKVRDTAWKITDADVAGLDADALYEAVLPVAFAAADAKRRRAHEAIDAG*
Ga0070707_1012726433	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RKADALWRAVGEAVGPVGGKTPLTEKVRAGAWTITDADVVGMSADALYETVLPVAFAAADEMRRRAYEAIDAG*
Ga0070698_1007511012	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VESSSSSFAGFSRTELWRRVGEAVGPTQNRPELEPLLDKVRNHAWRITDADVAGLDADALYEAVLPV
Ga0070741_101152725	3300005529	Surface Soil	MAASSSSSSAASSRTDELWRRVGEAAGAMPAPTPLLDKVRDAAWRITDADVDGMSADELYEAVLPVAYAAADEKRRRAHEAIDAG*
Ga0070741_101530332	3300005529	Surface Soil	LPADELWQQVGAAAGPIGEMTPLLEKVRDCAWRITDADVAGLDADGLYEAVLPVAFAAADEKRRRAYEAIDAG*
Ga0070741_110967742	3300005529	Surface Soil	MAASSSSSSAGSSPADELWRAVGEAAGPAGPMTPLLEKVRDCAWKITDADVAGLAADELYEAVLPVAYAAADEKRRRAHEAIDAG*
Ga0070739_100077475	3300005532	Surface Soil	MSSAASSRRADALWRALGEAAGPAGKPTPLTEKVRVAAWTITDADVAGLSADELYEAVLPVAFAAADERRRRAYEAIDAG*
Ga0070735_100896665	3300005534	Surface Soil	MAASSSSSSAGSSRADELWRAVGAAAGPLPEMTPLLEKVRDTAWKVVPRDLDGLTADELYEAVLPVAFAAADERRRRAYEAIDAR*
Ga0070697_1018134202	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VESSSSSFAGFSRTELWQRVGEAVGPTQNRPELEPLLDKVRNHAWRITDADVAGLDADALYEAVLPVAFAVADEQRRRALEAIG*
Ga0070731_100349356	3300005538	Surface Soil	MAASSGSSSAASSRTDERWRALGRAVGPVVERPELAALLDKVRRCAWRITGDDVAGIDADELYEAVLPVAFEVADEKRRRAYEAIDAH*
Ga0070731_109836401	3300005538	Surface Soil	PVFGWTRRASVNTCGTVEFSSTSSAGSSQTDALWRAVGEAAGPVGEMTPLLEKVRDAAWKITPRDIEGLTADELYEAVLPVAFAAADEKRRRAHEAIDAS*
Ga0070732_100635553	3300005542	Surface Soil	MGASSSSSSAGSSRADELWRRVGEAAGEPTELTPLLQKVRDRAWRITDADVAGLDADALYEAVLPVAFATADKKRRRAYEAIDAC*
Ga0070732_101149792	3300005542	Surface Soil	MAASSNLSSAGSSQADALWQRVGEAVGDAPELTPLLEKVRDCAWRITDADVAGLDADALYEAVLPVAFAAADEKRRRAHEAIDAR*
Ga0066670_104913241	3300005560	Soil	MAASSSSSSAGSSRADELWGAVGEAAGPVGEMTPLLEKVRHTAWKITDADVAGLEVDALYEAVLPVAYAAADAKRRRAHEAIDAG*
Ga0066693_102642762	3300005566	Soil	MAASSSSSSAGSSRAEALWRRVGAAVGPAGEMTPLLEKVRDCAWRITDADVDGLDADALFEVVLPVAFAAADEKRGRAREAIDAG*
Ga0068854_1014844912	3300005578	Corn Rhizosphere	MAASSSSSSAGSSPANELWRALGAAAGTPGEMTPLLEKVRDCAWKITDADVAGLDAGTLYEAVLPVAFAAADEKRRRAHEAIDAG*
Ga0066654_105926242	3300005587	Soil	MAASSSSSSAGSSRADELWRRVGEAAGPVGEMTPLLEKVRDSAWKVTDADVAGLEADALYEAVLPVAYAAADAKRRRAHEAIDAG*
Ga0068856_1020454831	3300005614	Corn Rhizosphere	MAASSSSSSAGSSPADELWRALGAAAGTPGEMTPLLEKVRDCAWKITDADVAGLDAGTLYEAVL
Ga0075275_10162532	3300005892	Rice Paddy Soil	MEASSSTSSAGSSRADGLWRAVGEAAGPVGEMTPLLEKVRDCAWRITDADVAGLSADELYEAVLPVAFAVADEKRRRAYEAIDAD*
Ga0075281_10481332	3300005897	Rice Paddy Soil	MEASSSTSSAGSSRADGLWRAVGEAAGPVGEMTPLLEKVRDCAWRITDADVAGLSADELYEAVLPVAFAVADERRRRAYEAIDAD*
Ga0075272_11032452	3300005900	Rice Paddy Soil	MAASSGSSSAGSSRADELWRRVGDAVGPAGELTPLLEKVRDQAWRITDRDVAGLDADALYEAVLPVAFAAADAKRRRAHEAIDAH*
Ga0070717_104025572	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VASSSSSSAGSLRKADALWRAVGEAVGPVGGKTPLTEKVRAGAWTITDADIVGMSADALYETVLPVAFAAADEMRRRAYEAIDAG*
Ga0066656_105288301	3300006034	Soil	MAASSSSSSAGSSRADELWRRVGAAAGDAPELTPLLEKVRDAAWRITDADVDGMSADELYEAVLPVAYAAADEKRRHAHEAIDAG*
Ga0070716_1002225052	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LRTEELWRGVGAAAGPMGEMTPLLEKVRDCAWKITDADVAGLETDELYAAVLPVAFAAADGKRRRAYEAIDAG*
Ga0070716_1005006902	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAAFSSSSSAGYSRADELWHAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADAKRRRAHEAIDAG*
Ga0079220_111449582	3300006806	Agricultural Soil	MAASSSSSSAGSSPADELWRAVGEAAGPVGGMIPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADAKRRRAHEAIDAG*
Ga0075426_104909332	3300006903	Populus Rhizosphere	MAASSSSSSAGSSPADELWRAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADARRRHAHEAIDAC*
Ga0075436_1002960404	3300006914	Populus Rhizosphere	LRTEELWRRVGAAAGPMGEMTPLLEKVRDCAWKITDADVAGLGTDELYAAVLPVAFAAADGKRRRAYEAIDAG*
Ga0134128_110395232	3300010373	Terrestrial Soil	MAASSSSSSAGSSPADELWRAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAVADGKRRRAHEAIDAG*
Ga0126344_11743072	3300010866	Boreal Forest Soil	MAASSSSSSAGSSPADELWRRVGEAVGPAGEPTPLLEKVREHAWRITDADIAGLDADALYEAVLPAAFAVADEKRRRAHEAIDAD*
Ga0126356_106955002	3300010877	Boreal Forest Soil	MAASSSSSSAGSSRADELWRRVGEAVGPAREPTPLLEKVREHAWRITDADVAGLDADALYETVLPVAFAVADEKRRRAYEAIDAH*
Ga0126356_107161521	3300010877	Boreal Forest Soil	SSPADELWRRVGEAVGPAGEPTPLLEKVREHAWRITDADIAGLDADALYEAVLPAAFAVADEKRRRAHEAIDAD*
Ga0126356_113419291	3300010877	Boreal Forest Soil	MAASSSSSSAGSSPADELWRRVGEAVGPAGEPTPLLEKVRDHAWRITDADIAGLDADALYEAVLPAAFAVADEKRRRAHEAIDA
Ga0126350_111942872	3300010880	Boreal Forest Soil	MAASSSSSSAGSSRADELWRRVGEAVGPAGEPTPLLEKVREHAWRITDADVAGLDADALYEAVLPAAFAVADEKRRRAYEATDAH*
Ga0126350_113193482	3300010880	Boreal Forest Soil	MAASSNSSSAGFSRAEELWRRVGEAVGPAGEPTPLLEKVREHAWRITDADVAGLDADALYEAVLPVAFAVADEKRRRAYEAIDED*
Ga0126350_123718621	3300010880	Boreal Forest Soil	MAASSSSSSAGSSRADELWRRVGEAVGPAGKPTPLIEKVSEHAWRITDADVAGLDSDALYEAVLPAAFAVADEKRRRAYEAIDAH*
Ga0168317_100010349	3300012982	Weathered Mine Tailings	MAASSSSSSGGSSRADELWRALGAAAGPAGEMTPLLVKVRDRAWTITDADVAGLSADELYEAVLPVAFAAADQKRRRAHEAIDAG*
Ga0157372_122462362	3300013307	Corn Rhizosphere	MAASSSSSSAGSSPADELWRAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADELYEAVLPVAFAVADGKRRRAHEAIDAG*
Ga0187820_10130614	3300017924	Freshwater Sediment	LPADELWQQVGAAAGPIGEMTPLLEKVRDCAWRITDADVAGLDADALYEAVLPVAFAAADEKRRRAYEAIDAG
Ga0187820_10241632	3300017924	Freshwater Sediment	LRKADELWRAVGEAAGPAGEPTPLLEKVRERAWRITDADVAGLSADELYEAVLPVAFAAADEKRRRAYEAIDAG
Ga0187820_10863992	3300017924	Freshwater Sediment	LRKADELWRAVGEAAGPAGEPTPLLEKVRDCAWRITDDDVAGLSADELYEAVLPVAFAAADEKRRRAYEAIDAG
Ga0187825_102477063	3300017930	Freshwater Sediment	TRPASATICGTAASSSTSCGGCLPADELWQQVGAAAGPIGEMTPLLEKVRDCAWRITDADVAGLDADALYEAVLPVAFAAADEKRRRAYEAIDAG
Ga0187809_100511932	3300017937	Freshwater Sediment	LPADELWQQVGAAAGPIGEMTPLLEKVRHCAWRITDADVAGLDADALYEAVLPVAFAAADEKRRRAYEAIDAG
Ga0187809_101950452	3300017937	Freshwater Sediment	MAASSSSSSAGSSRTDELWRRVGAAAGDLPELTPLLEKVRDAAWRITAADVDGMTADELYAAVLPVAFAAADEKRWRAHEAIDAG
Ga0187775_101607572	3300017939	Tropical Peatland	MAASSSSSSAGSSRADELWRLVGEAAGPARDRLELARLLDKVRNHAWRITDADVAGLDADALYEAVLPVAFAVADEKRRRAYEAINAR
Ga0187778_109658241	3300017961	Tropical Peatland	MAESSSSSFGGSSRADALWAAVGAAAGPAGEMTPLLEKVRDSAWRITDADVAGLDADA
Ga0187776_106334862	3300017966	Tropical Peatland	MAASSSSSSAGSSRADELWRLVGEATGPARDRLELARLLDKVRNHAWRITDADVAGLDADALYEAVLP
Ga0187822_100212804	3300017994	Freshwater Sediment	LWRAVGEAAGPAGEPTPLLEKVRDCAWRITDDDVAGLSADELYEAVLPVAFAAADEKRRRAYEAIDAG
Ga0187788_105191302	3300018032	Tropical Peatland	MSYADSSRAEELWRRVGEAAGDQPEPTPLLEKVRDCAWRITDADVAGLEADALYEAVLPVAFAAADEKRRRAYEAIG
Ga0193751_100087120	3300019888	Soil	MAASSSSSSAGSSRADELWRRVGEAVGPAGEPTPLIEKVREHAWRITDADVAGLDADALYEAVLPVAFAVADEKRRRAYEAIDAH
Ga0213877_101075212	3300021372	Bulk Soil	MSSGDSSRADALWRAVGEAAGRPGEPTALTEKVRTAAWRIVDADVAGLSADELYEAVLPVAFAAADEKRQRAYEAIDAA
Ga0213871_100107872	3300021441	Rhizosphere	MSSGDSSRADALWRAVGEAAGRPGEPTALTEKVRTAAWRIVDADVAGLSADELYEAVLPVAFAAADEKRQRAY
Ga0213871_102453282	3300021441	Rhizosphere	MAGSSSTSSAGSSPADALWRAVGRAAGPVGEMTPLLEKVRDAAWKITARDVEGLTADELYEAVLPVAFAAADEKRRRAHEAVDAH
Ga0208849_10788392	3300025664	Arctic Peat Soil	MAASSSSSSAASSRTDELWRRVGEAVGPAGEPTPLLEKVREHAWRITDADVAGLDADALYEAVLPVAFAVADEKRRRAYEAIHAD
Ga0207684_103734912	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VESSNSSYAGFSRTELWRRVGEAVGPTQNRPELEPLLDKVRNHAWRITDADVAGLDADALYEAVLPVAFAVAEEQRRRALEAIG
Ga0207693_105965952	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSSSSSAGSSPTDELWRAVGEAAGPVGGMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAAD
Ga0207700_100319186	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAASSSSSSAGSSPTDELWRAVGEAAGPVGGMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADAKRRRAHEAIDAG
Ga0207664_100136535	3300025929	Agricultural Soil	MAASSSSSSAGSSPADELWRAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADGKRRRAHEAIDAG
Ga0207664_117325652	3300025929	Agricultural Soil	GSSPTDELWRAVGEAAGPVGGMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADAKRRRAHEAIDAG
Ga0207665_108154482	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAAFSSSSSAGYSRADELWHAVGEAAGPVGDMTPLLEKVRDSAWKITDADVDDLDADALYEAVLPVAFAAADAKRRRAHEAIDAG
Ga0207640_102617184	3300025981	Corn Rhizosphere	MAASSSSSSAGSSPANELWRALGAAAGTPGEMTPLLEKVRDCAWKITDADVAGLDAGTLYEAVLPVAFAAADEKRRRAHEAIDAG
Ga0208139_10458582	3300025982	Rice Paddy Soil	MEASSSTSSAGSSRADGLWRAVGEAAGPVGEMTPLLEKVRDCAWRITDADVAGLSADELYEAVLPVAFAVADERRR
Ga0208527_10024912	3300025990	Rice Paddy Soil	MEASSSTSSAGSSRADGLWRAVGEAAGPVGEMTPLLEKVRDCAWRITDADVAGLSADELYEAVLPVAFAVADERRRRAYEAIDAD
Ga0208649_10082372	3300026022	Rice Paddy Soil	MEASSSTSSAGSSRADGLWRAVGEAAGPVGEMTPLLEKVRDCAWRITDADVAGLSADELYEAVLPVAFAVADEKRRRAYEAIDAD
Ga0209153_12260782	3300026312	Soil	MAASSSSSSAGSSRAEALWRRVGAAVGPAGEMTPLLEKVRDCAWRITDADVDGLDADALYEVVLPVAFAAADEKRGRAREAIDAG
Ga0209059_12314561	3300026527	Soil	MAASSSSSSAGSSRADELWRAVGEAAGPVGEMTPLLEKVRDCAWRITDADVDGLDADALYEVVLPVAFAAADEKRGRAREAIDAG
Ga0208042_11214492	3300027568	Peatlands Soil	MAASSSSSSAASSRTDDLWHRVGEAVGPVGEMTPLLGKVRDCAWRITDADVEGLDADALY
Ga0209810_10669194	3300027773	Surface Soil	MSSAASSRRADALWRALGEAAGPAGKPTPLTEKVRVAAWTITDADVAGLSADELYEAVLPVAFAAADERRRRAYEAIDAG
Ga0209579_1000197411	3300027869	Surface Soil	VNTCGTVEFSSTSSAGSSQTDALWRAVGEAAGPVGEMTPLLEKVRDAAWKITPRDIEGLTADELYEAVLPVAFAAADEKRRRAHEAIDAS
Ga0209579_100023914	3300027869	Surface Soil	LPADELWQQVGAAAGPIGEMTPLLEKVRDCAWRITDADVAGLDADGLYEAVLPVAFAAADEKRRRAYEAIDAG
Ga0209579_101077814	3300027869	Surface Soil	MAASSGSSSAASSRTDERWRALGRAVGPVVERPELAALLDKVRRCAWRITGDDVAGIDADELYEAVLPVAFEVADEKRRRAYEAIDAH
Ga0209415_1000491918	3300027905	Peatlands Soil	MAASSSSSSAASSRTDDLWHRVGEAVGPVGEMTPLLGKVRDCAWRITDADVEGLDADALYEAVLPVAFAAADAKRRAAYEALG
Ga0265336_100144052	3300028666	Rhizosphere	MAGSSSSSSAGSSRADELWHRVGAAVGTAGEMTPLLEKVRDCAWRITDRDVAGLDADA
Ga0265336_100586684	3300028666	Rhizosphere	GMAASSSSSSAGSSRADEFWRRTGAAVGPAGEMTPLLEKVRDCAWRVTDADVAGLDADALYEAVLPVAFAAADEKRRAAYEAIG
Ga0265338_1000763714	3300028800	Rhizosphere	MAASSSSSSAGSSRADELWRCVGEAAGPAGEMTPLLEKVRDHAWRITDRDVAGLDADALYEAILPVAFAAADEKRRAAYEAIDAH
Ga0265338_100373846	3300028800	Rhizosphere	VESSSTSSGGSSRTDLWRAVGEAAGPVGATTPLTEKVRTAAWRITDADVAGLSADELYEIVLPVAFAAADEARRRAHEAIDAY
(restricted) Ga0255310_100565962	3300031197	Sandy Soil	MAASSSSSSAGSSRTDELWRRVGEAAGPVGELTPLLEKVRCSAWKITDADVAGLDADAL
Ga0265325_100402741	3300031241	Rhizosphere	MAASSSSSSAGSSRADELWRRAGEAVGPAGEMTPLLEKVRDCAWRITDADVAGLNADALYEAVLPVAFAAADEKRRTAYEAIG
Ga0265339_100166942	3300031249	Rhizosphere	MAGSSSSSSAGSSRADELWHRVGAAVGTAGEMTPLLEKVRDCAWRITDRDVAGLDADALYEAVLPVAFAAADEKRRAAYEAIDAH
Ga0265331_103643311	3300031250	Rhizosphere	SSSSAGSSRADELWHRVGAAVGTAGEMTPLLEKVRDCAWRITDRDVAGLDADALYEAVLPVAFAAADEKRRAAYEAIDAH
Ga0307374_100615544	3300031670	Soil	MAASSSSSSAGSSRADELWRRVGEAVGPAGEPTPLLEKVREHAWRITDADVAGLDADGLYEAVLPTAFAVADEKRRRAYEAIDAD
Ga0265342_101689362	3300031712	Rhizosphere	MAASSSSSSAGSSRADELWRCVGEAAGPAGEMTPLLEKVRDCAWRITDADVAGLNADALYEAVLPVAFA
Ga0265342_103027572	3300031712	Rhizosphere	MAGSSSSSSAGSSRADELWHRVGAAVGTAGEMTPLLEKVRDCAWRITDRDVAGLDADALYEAVLPVAFAAADEKRRAAYEAIG
Ga0307477_100801485	3300031753	Hardwood Forest Soil	MGASSSSSSAGSSRADELWRRVGEAAGEPTELTPLLEKVRDRAWRITDADVAGLDADELYEAVLPVAFATADKKRRRAYEAIDAC
Ga0307475_100488615	3300031754	Hardwood Forest Soil	MAASSSSFSAGSSRADELWRRVGAAAGPVGEMTPLLEKVRDCAWRITDADVAGLEADELYEAVLPVAFAAADEKRRRAHEAIGAD
Ga0307475_103326132	3300031754	Hardwood Forest Soil	LSSAGSSQADALWQRVGEAVGDAPELTPLLEKVRDCAWRITDADVAGLDADALYEAVLPVAFAAADEKRRRAHEAIDAR
Ga0306923_119557332	3300031910	Soil	MAASSSSSSAGSSRADKLWRRVGEAAGHPPDLTPLLEKVRDCAWRITDADVAGLEADALYEAVLPVAFAAADETRRRAYEAIG
Ga0307479_102709094	3300031962	Hardwood Forest Soil	MGASSSSSSAGSSRADELWRRVGEAAGEPTELTPLLEKVRDGAWRITDADVAGLDADALYEALLPVAFATAEEKRRRAYEAIDAC
Ga0307471_1032413932	3300032180	Hardwood Forest Soil	LRTEELWRRVGAAAGPTGEMTPLLEKVRDCAWKITDADVAGLETDELYAAVLPVAFAAADGKRRRAYEAIDAG
Ga0335079_102554202	3300032783	Soil	LPADQLWRRVGAAAGPVGALTPLLEKVRDCAWRITDADVAGLDADALYEAVLPVAFAAADEKRRRAHEAIDAG
Ga0335078_101241814	3300032805	Soil	MSSAGSSQADELWRRVGEAVGVPGEPTPLLEKVRDCAWRITDADIAGLDADRLYEAVLPVAFAAADEKRRRAYEAIG
Ga0335078_101443436	3300032805	Soil	MEESSSSSSAGSSRADELWRCVGEAAGPAGEMTPLLEKVRDCAWRITDADVAGLDADALYEAVLPVAFAAADRKRRAAYEAIG
Ga0335080_106436732	3300032828	Soil	MAASSGSSSAGSSCTDELWRLVGEAAGPARNRPELARLLDKVRSHAWRITDADVAGLDADALYEAVLPVAFAVADEKRRRAYEAIDAR
Ga0335080_113988732	3300032828	Soil	LPADELWRRVGAAAGPVGEMTPLLEKVRDCAWRITDADVAGLDADALYEAVLSVAFAAADEKRRRAYEAIDAG
Ga0335081_127178001	3300032892	Soil	LPADQLWRRVGAAAGPVGEMTPLLEKVRDCAWRITDADVAGLDADSLYEAVLPVAFAVADETRRRAYEAIDAR
Ga0335069_111589662	3300032893	Soil	VNGSSRRADALWRAVGDAAGPAGEPTQLTEKVRTAAWRIADADVAGLTADELYETVLPVAFAAADEKRRLAYEAIDAG
Ga0335073_114007832	3300033134	Soil	MAASSSTSSGASSRADDLWRAVGDAAGPTGELTPLLEKVRDCAWRIVDADVAGLDADALYEAVLPVAFAAADEKRRRAYEAIDAH
Ga0334722_100593414	3300033233	Sediment	MGEFSSSSSAGSSPAELWQRVGDAVGPIVDRPELAPLLDKVRKHAWRITDADIEGLDADALYEAVLPVAFEVADEQRRRALEAIG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters