NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F092994

Metagenome / Metatranscriptome Family F092994

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092994
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 71 residues
Representative Sequence MDLSAGKRRISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKASGAEVKEVGTKEGSEESGKD
Number of Associated Samples 10
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 69.81 %
% of genes near scaffold ends (potentially truncated) 12.26 %
% of genes from short scaffolds (< 2000 bps) 15.09 %
Associated GOLD sequencing projects 10
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (72.642 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza
(91.509 % of family members)
Environment Ontology (ENVO) Unclassified
(91.509 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(67.925 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.08%    β-sheet: 2.08%    Coil/Unstructured: 70.83%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00078RVT_1 21.15
PF03732Retrotrans_gag 13.46
PF00665rve 9.62
PF08284RVP_2 9.62
PF13650Asp_protease_2 4.81
PF07727RVT_2 4.81
PF00385Chromo 2.88
PF14223Retrotran_gag_2 2.88
PF05699Dimer_Tnp_hAT 1.92
PF12796Ank_2 1.92
PF00773RNB 0.96
PF13637Ank_4 0.96
PF03129HGTP_anticodon 0.96
PF00107ADH_zinc_N 0.96
PF00117GATase 0.96
PF00271Helicase_C 0.96
PF00828Ribosomal_L27A 0.96
PF02668TauD 0.96
PF08031BBE 0.96
PF00067p450 0.96
PF01521Fe-S_biosyn 0.96
PF00464SHMT 0.96
PF00004AAA 0.96
PF03221HTH_Tnp_Tc5 0.96
PF00075RNase_H 0.96
PF03142Chitin_synth_2 0.96
PF05225HTH_psq 0.96
PF13358DDE_3 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 9.62
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 9.62
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 9.62
COG4584TransposaseMobilome: prophages, transposons [X] 9.62
COG0112Glycine/serine hydroxymethyltransferaseAmino acid transport and metabolism [E] 0.96
COG0124Histidyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.96
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 0.96
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.96
COG0316Fe-S cluster assembly iron-binding protein IscAPosttranslational modification, protein turnover, chaperones [O] 0.96
COG0423Glycyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 0.96
COG0441Threonyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.96
COG0442Prolyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.96
COG0557Exoribonuclease RTranscription [K] 0.96
COG1215Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthaseCell motility [N] 0.96
COG1727Ribosomal protein L18ETranslation, ribosomal structure and biogenesis [J] 0.96
COG2124Cytochrome P450Defense mechanisms [V] 0.96
COG2175Taurine dioxygenase, alpha-ketoglutarate-dependentSecondary metabolites biosynthesis, transport and catabolism [Q] 0.96
COG4776Exoribonuclease IITranscription [K] 0.96
COG4841Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF familyFunction unknown [S] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.64 %
UnclassifiedrootN/A27.36 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300012683|Ga0137398_10789817All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes → Morchella sextelata663Open in IMG/M
3300015242|Ga0137412_10161990Not Available1800Open in IMG/M
3300018466|Ga0190268_10739868All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes → Morchella sextelata731Open in IMG/M
3300028794|Ga0307515_10000225All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales139846Open in IMG/M
3300028794|Ga0307515_10000256Not Available132074Open in IMG/M
3300028794|Ga0307515_10000538All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales89076Open in IMG/M
3300028794|Ga0307515_10000710Not Available76848Open in IMG/M
3300028794|Ga0307515_10000849All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina70291Open in IMG/M
3300028794|Ga0307515_10001000Not Available64618Open in IMG/M
3300028794|Ga0307515_10001138All Organisms → cellular organisms → Eukaryota → Opisthokonta60992Open in IMG/M
3300028794|Ga0307515_10001157All Organisms → cellular organisms → Eukaryota → Opisthokonta60445Open in IMG/M
3300028794|Ga0307515_10001205All Organisms → cellular organisms → Eukaryota59066Open in IMG/M
3300028794|Ga0307515_10001704Not Available49013Open in IMG/M
3300028794|Ga0307515_10001712All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina48883Open in IMG/M
3300028794|Ga0307515_10001816All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales47607Open in IMG/M
3300028794|Ga0307515_10001846Not Available47181Open in IMG/M
3300028794|Ga0307515_10002385All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina40965Open in IMG/M
3300028794|Ga0307515_10003162All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi34846Open in IMG/M
3300028794|Ga0307515_10003780All Organisms → cellular organisms → Eukaryota31714Open in IMG/M
3300028794|Ga0307515_10005409All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya25882Open in IMG/M
3300028794|Ga0307515_10005712All Organisms → cellular organisms → Eukaryota → Opisthokonta25127Open in IMG/M
3300028794|Ga0307515_10008336Not Available20220Open in IMG/M
3300028794|Ga0307515_10010489All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya17749Open in IMG/M
3300028794|Ga0307515_10012911All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi15666Open in IMG/M
3300028794|Ga0307515_10022224All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina11189Open in IMG/M
3300028794|Ga0307515_10045167Not Available6776Open in IMG/M
3300028794|Ga0307515_10083580All Organisms → cellular organisms → Eukaryota → Opisthokonta4113Open in IMG/M
3300028794|Ga0307515_10090209All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina3848Open in IMG/M
3300028794|Ga0307515_10122723Not Available2927Open in IMG/M
3300028794|Ga0307515_10155191Not Available2367Open in IMG/M
3300028794|Ga0307515_10162570Not Available2268Open in IMG/M
3300028794|Ga0307515_10213854All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina1764Open in IMG/M
3300028794|Ga0307515_10504955All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes → Morchella sextelata819Open in IMG/M
3300028794|Ga0307515_10900834Not Available515Open in IMG/M
3300030522|Ga0307512_10000083Not Available112107Open in IMG/M
3300030522|Ga0307512_10000114Not Available102129Open in IMG/M
3300030522|Ga0307512_10000149Not Available92166Open in IMG/M
3300030522|Ga0307512_10000357All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina66320Open in IMG/M
3300030522|Ga0307512_10000702All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales49845Open in IMG/M
3300030522|Ga0307512_10000810All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales46208Open in IMG/M
3300030522|Ga0307512_10000819All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina45854Open in IMG/M
3300030522|Ga0307512_10000836All Organisms → cellular organisms → Eukaryota45270Open in IMG/M
3300030522|Ga0307512_10001033All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya40798Open in IMG/M
3300030522|Ga0307512_10001378Not Available34501Open in IMG/M
3300030522|Ga0307512_10001547All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales32246Open in IMG/M
3300030522|Ga0307512_10001568All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina32022Open in IMG/M
3300030522|Ga0307512_10001701All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Pyronemataceae → Pyronema → Pyronema omphalodes → Pyronema omphalodes CBS 10030430077Open in IMG/M
3300030522|Ga0307512_10002211All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina25349Open in IMG/M
3300030522|Ga0307512_10002313All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya24585Open in IMG/M
3300030522|Ga0307512_10002713All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi21728Open in IMG/M
3300030522|Ga0307512_10003048All Organisms → cellular organisms → Eukaryota → Opisthokonta20088Open in IMG/M
3300030522|Ga0307512_10003664All Organisms → cellular organisms → Eukaryota → Opisthokonta17547Open in IMG/M
3300030522|Ga0307512_10004420All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina15425Open in IMG/M
3300030522|Ga0307512_10006548All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi11770Open in IMG/M
3300030522|Ga0307512_10006617All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina11701Open in IMG/M
3300030522|Ga0307512_10006667All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina11628Open in IMG/M
3300030522|Ga0307512_10011122All Organisms → cellular organisms → Eukaryota8540Open in IMG/M
3300030522|Ga0307512_10012272All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota8094Open in IMG/M
3300030522|Ga0307512_10012419Not Available8038Open in IMG/M
3300030522|Ga0307512_10019611Not Available6148Open in IMG/M
3300030522|Ga0307512_10036662All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina4153Open in IMG/M
3300030522|Ga0307512_10096640Not Available2024Open in IMG/M
3300030522|Ga0307512_10172727All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes → Morchella sextelata1234Open in IMG/M
3300030522|Ga0307512_10177708Not Available1203Open in IMG/M
3300030522|Ga0307512_10217387Not Available1004Open in IMG/M
3300030522|Ga0307512_10304614Not Available738Open in IMG/M
3300030908|Ga0074005_13568108Not Available534Open in IMG/M
3300031003|Ga0074003_10100038Not Available669Open in IMG/M
3300031003|Ga0074003_10107646Not Available507Open in IMG/M
3300031086|Ga0074002_14479302Not Available523Open in IMG/M
3300031164|Ga0307502_10069875All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes → Morchella sextelata680Open in IMG/M
3300031164|Ga0307502_10077459Not Available655Open in IMG/M
3300031649|Ga0307514_10000009All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales519472Open in IMG/M
3300031649|Ga0307514_10000032All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales365725Open in IMG/M
3300031649|Ga0307514_10000037All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina353786Open in IMG/M
3300031649|Ga0307514_10000073All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina264966Open in IMG/M
3300031649|Ga0307514_10000076All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina263584Open in IMG/M
3300031649|Ga0307514_10000102All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya236545Open in IMG/M
3300031649|Ga0307514_10000102All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya236545Open in IMG/M
3300031649|Ga0307514_10000106All Organisms → cellular organisms → Eukaryota230739Open in IMG/M
3300031649|Ga0307514_10000112Not Available225924Open in IMG/M
3300031649|Ga0307514_10000132All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina210480Open in IMG/M
3300031649|Ga0307514_10000135All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina209111Open in IMG/M
3300031649|Ga0307514_10000158All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya189953Open in IMG/M
3300031649|Ga0307514_10000216All Organisms → cellular organisms → Eukaryota → Opisthokonta158489Open in IMG/M
3300031649|Ga0307514_10000216All Organisms → cellular organisms → Eukaryota → Opisthokonta158489Open in IMG/M
3300031649|Ga0307514_10000222All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya151784Open in IMG/M
3300031649|Ga0307514_10000224All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina151344Open in IMG/M
3300031649|Ga0307514_10000235All Organisms → cellular organisms → Eukaryota143899Open in IMG/M
3300031649|Ga0307514_10000239All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina142247Open in IMG/M
3300031649|Ga0307514_10000254All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina136991Open in IMG/M
3300031649|Ga0307514_10000268All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina133969Open in IMG/M
3300031649|Ga0307514_10000270All Organisms → cellular organisms → Eukaryota → Opisthokonta133625Open in IMG/M
3300031649|Ga0307514_10000322All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi115009Open in IMG/M
3300031649|Ga0307514_10000332Not Available112647Open in IMG/M
3300031649|Ga0307514_10000642All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina63686Open in IMG/M
3300031649|Ga0307514_10000686All Organisms → cellular organisms → Eukaryota → Opisthokonta59904Open in IMG/M
3300031649|Ga0307514_10000787All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina52493Open in IMG/M
3300031649|Ga0307514_10000817All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina50628Open in IMG/M
3300031649|Ga0307514_10000910All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina45591Open in IMG/M
3300031649|Ga0307514_10000933All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota44469Open in IMG/M
3300031649|Ga0307514_10001144All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi36323Open in IMG/M
3300031649|Ga0307514_10001185All Organisms → cellular organisms → Eukaryota → Opisthokonta35090Open in IMG/M
3300031649|Ga0307514_10001353All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi31048Open in IMG/M
3300031649|Ga0307514_10003031All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales16600Open in IMG/M
3300031649|Ga0307514_10003294All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi15687Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza91.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.83%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300030522Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EMHost-AssociatedOpen in IMG/M
3300030908Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Litter TCEFA (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031003Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Litter GP-3A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031086Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Litter GP-2 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031164Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_SEnvironmentalOpen in IMG/M
3300031649Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EMHost-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0137398_1078981713300012683Vadose Zone SoilPMDLSAGKRRISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKASGAEVKEVGTKEGSEESGKD*
Ga0137412_1016199023300015242Vadose Zone SoilMDLSAGTRRISAEERAKRFADGRCLYCGGFNHRAAECVARKKAQIFKASGAEVEEVGSKEGSEESGKD*
Ga0190268_1073986823300018466SoilMNLRAARRRMWAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKVSGAEVKEVGTKEGSEESGKD
Ga0307515_100002251243300028794EctomycorrhizaMDLSPGRRKIPAEERAKRYTDGRCVYCGGFNDMAAECVARKKVQTFKAAGADGMEVGTGAGSKELGKEQVNGGRMALQLTEKVLF
Ga0307515_10000256243300028794EctomycorrhizaMDLCADRRRITAEERAKRFMDGRWLYCGGFNQRAAECAVRKKAQTLKVAGAEVKEVGTRTGSEESGEEQVN
Ga0307515_10000538113300028794EctomycorrhizaMDLRAGRRTSSAEERAQRFVDGRCLYCGGFNHRVADCAARKNAQTFQVAGVEEMEVGTRTGSKESGKD
Ga0307515_1000071083300028794EctomycorrhizaMDPAGAPAQPVAGYTGPAPIDLSGGWRRISAGDRAKRFTDGRCLYCGGFNHRATECAARKTAQTLKPAGAEAKEVGTPATCSEES
Ga0307515_10000849463300028794EctomycorrhizaMDLSAGRRRISAEERPKRFTDGRCLYCGGFNNRAAECAARKKAQRFKAAGAEVKDVETGTGSEESRKE
Ga0307515_10001000223300028794EctomycorrhizaMDPSAGRRRIPVEERAKRFTDGRCLNCGRLNHRAEECAVRKRAQTFQAAGAEVKEVGTGTGTEELGQEQVNCRRMALQLTIKVLF
Ga0307515_10001138293300028794EctomycorrhizaMDFSAGRRRIAAEESAKRFADGRCLYCGGFNHRVAECTARKKAQMFRAAQVKVKEVGTGAGSEESE
Ga0307515_1000115783300028794EctomycorrhizaMDPSAGGRRISAEDRAKRFTDGCCLYCGAFNHRAAECAARKKAQMVMAAGAEVNEVGTRTGSEQLGKEQVN
Ga0307515_10001205343300028794EctomycorrhizaMVAGYTGATPIDLSTGRRRISAEERAKRFTDGRCLYCGGFNHRAAECEARKKVQTFKAAGAEIKEVGPRTGSEEWGKEQVN
Ga0307515_10001704163300028794EctomycorrhizaMDLRAARRRISAEDRAKRFTDGRRLYCGGLNHRAAECAARKIAQTFKAAGAEVKEVGTETGSEESVKEYVNSRKMALQLTEKVLFQIL
Ga0307515_10001712163300028794EctomycorrhizaMHLSASKRRISVEETAKRFADGRCLYWGGLNHRAAECAARKKAQTFKAAGGEVKEIQTKEGSEEPRKD
Ga0307515_10001816653300028794EctomycorrhizaMDLSAGRRRNSNEERAMRFADGRCLYCGGFNHRAVDCAVRMKARSFNVIGGEVKEVA
Ga0307515_10001846163300028794EctomycorrhizaMAPTGTFAGYTGTASMDRSTDKRKIWAEKRAKRFADGRCLYCGGFNHRATECAAGKKAQTFKADGAEGTEVGTVEGSKESGKD
Ga0307515_10002385143300028794EctomycorrhizaMDLSAGKGRISAEERAKRFTDGRCLYCGGFNHRAAECAARKKAQTFKAAGVEVKEVGTGTGSEESGKEQVN
Ga0307515_10003162413300028794EctomycorrhizaMDLSAGRRRISADKRAKRFTDERCLYCGGFNHRAAECAARTKAPMFKAARAEIEEVGPGIGSEESGKSRSIERGCPFS
Ga0307515_10003780353300028794EctomycorrhizaMISREERAKTFADERCLYCGGFKQRAVECAARKNAQMFKAAGAEVKEIGTGTGSDESVIEQDN
Ga0307515_10005409203300028794EctomycorrhizaMDINVGRKTISVEERAKRFTDARCLYCGRFNYRAAECVATKKAQTFKAAGAEVQEIGTGTGSEESGKEQVN
Ga0307515_1000571233300028794EctomycorrhizaMDLSAGRRRISDEERAKRFADGRCLYCGGFNHRAVDCAVRKKARPFKAAGAEVKETEGKEESKEKGKERVD
Ga0307515_10008336143300028794EctomycorrhizaMDLSAGKRRISAEEREKRFNDGRCLYCGWSNHRAADCAARKKAHTFKAAGAEVKEVATGTGSEESSKEQVN
Ga0307515_10010489103300028794EctomycorrhizaMDLSAGRRRISAEDRAKWFTDGRCLYCGVFYHGAAECAARKKAQTFKAAGAEVKEVGTGTGSEESGKEQVN
Ga0307515_10012911113300028794EctomycorrhizaMDLSAGRRRISAEQRAKRFTDGWCLYCGGFNHRAAECAARKKAETFKVAGAEVKEVGIGTGSEESGTKQVN
Ga0307515_1002222463300028794EctomycorrhizaMDLSAGKKRISAEERAKRFADGRCLYCGGFNHRAAECAVRKKAQTFKASGAEVKEVGTKEGSEESGKD
Ga0307515_1004516763300028794EctomycorrhizaMDLSPGMRRISAEERAKRFTDGRCLCCGGFNHRAAECAARKKAQIFKAAGAEVKEVGTATGPEESGKE
Ga0307515_1008358023300028794EctomycorrhizaAGYTGPAPMDLSAGRRRISEEERAKRFADGRCLYCGGFNHRAAECAARKKARTFKAAGAEIKEVGTKDSSEESGKD
Ga0307515_1009020953300028794EctomycorrhizaMDLSVGRRRISAEERAKRFMDGRCLYCGGFNHRAAECAARKMAQMFRASGAEVKEVGTGTGSEESGKKQVNCRRMALQLTVKVLF
Ga0307515_1012272333300028794EctomycorrhizaMDLSAGKKRISKEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKAAGAEVKEVGTKDGSEELGKD
Ga0307515_1015519123300028794EctomycorrhizaMDLSAGKRRISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKAAGAEVKEVATKDGSEESGKD
Ga0307515_1016257023300028794EctomycorrhizaMDLSAGRKWISDEERAKRFADGRCLYCGGFNHRAAECAARKKARTFKAAGAEVKEVGTKDASEESGKD
Ga0307515_1021385423300028794EctomycorrhizaRRISTEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKAAGAEVKEVGTKEGSEESGK
Ga0307515_1050495523300028794EctomycorrhizaPAPMDLSAGRRRISDEERAKRFADGRCLYCGGFNHRAAECAARKKARTFKAAGAEVKEVGTKDGSEESGKD
Ga0307515_1090083423300028794EctomycorrhizaPMDLSAGKKRISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKAAGAEIKEVGTKDGSEESGKDYVSPSRMALWLTEKVLF
Ga0307512_100000831053300030522EctomycorrhizaMDLSGGGRRISGEERAKRFTDGRCLYGGGFNHRAAECAVRKKAQMSKAAGAEVKEMVTGEGSEGSGKEQVN
Ga0307512_10000114703300030522EctomycorrhizaVAGYTGPAPMDLSTGKRRISAEERAKTFTDGRCLYCGGFNHRAAECVARKKAQMFKAAGAEIKEVGTGTDSKESGKEQVN
Ga0307512_10000149103300030522EctomycorrhizaMDLRAARRRISAEDRAKRFTDGRRLYCGGLNHRAAECAARKIAQTFKAAGAEVKEVGTETGSEESVKEYVN
Ga0307512_10000357213300030522EctomycorrhizaMDLSAGRRRISAEERAKRFTNGRYLYCGGFNHRVAECAARKKAQTFKEAGEEIKEVRTGTGSEELVKELVN
Ga0307512_10000702533300030522EctomycorrhizaMDLSEGRRRIAAEEMVKRFTDGRCLYCGGFNHRAEECVARKKALTFQAAGAEVEEIGTGTGS
Ga0307512_10000810393300030522EctomycorrhizaMDLSPGRRKIPAEERAKRYTDGRCVYCGGFNDMAAECVARKKVQTFKAAGADGKEVGTGAGSKELGKEQVNGGRMALQLTEKVLF
Ga0307512_10000819583300030522EctomycorrhizaMDLSAGKRRISAEERVKRFADGRCLYCGGCNHKAAECAARRKAQKFKAAGAEVKEVGTNESCEKSGTD
Ga0307512_10000836163300030522EctomycorrhizaMGPVHMDLSAGKRRISVDEMATRSTDRRCSYCGGFNHRVAECAVRKMTQSFKAPGAEVMKVGTRKGSEESGKH
Ga0307512_10001033263300030522EctomycorrhizaMDLSASRRRFAAEVRANRFVGGMCLYCGGFNPRAAECGAKRKTQTFKAAGMEVKEVGTKEGSEESGKG
Ga0307512_10001378373300030522EctomycorrhizaMDLSAGRRRISAEDRAKRFTDGRCLYCGEFYHGAAECAARKTAQTFKAAGAEVKEVGTGTGSEESGKEQVN
Ga0307512_1000154723300030522EctomycorrhizaMDLSAGRRWISDEERAKRFADGRCLYCGGFNHRAVDCAVRKKARPFKAAGAEVKETGGKENSEEKGKERVD
Ga0307512_1000156843300030522EctomycorrhizaVGTLTISIEQRAKRFVDGRCLYCGGLNHRAAECVARKKAQTFKAVSAKDKEVETRSGSEELGND
Ga0307512_1000170153300030522EctomycorrhizaMHLSASKRRISAEETAKRFADGRCLYWGGLNHRAAECAARKKAQTFKAAGGEVKELQTEEGSEESRKD
Ga0307512_10002211303300030522EctomycorrhizaLDLSAGRRRISAEERAKRFTDGRCLYCGGFNHRATECAAKEKASTFKAAGPEEKDVGTGTGPEKSEKEQVK
Ga0307512_10002313193300030522EctomycorrhizaMVAGYTGATPIDLSTGRRRISTEERAKRFTDGRCLYCGGFNHRAAECEARKKAQTFKAAGAEIKEVGPRTGSEEWGKEQVN
Ga0307512_1000271383300030522EctomycorrhizaMDLSAGRRRISDEQRAKRFADRRCLYCGGFNHRAVDCAARKKARPFKAAGAEVKEAEGKEDSKEKGKERVD
Ga0307512_1000304843300030522EctomycorrhizaMDHSSGRKKISTEALSRRFTDGRCLYCGGFNHRAADCAARKKVQTAEAGGAEVKKAGTRTGSEESGKEKVN
Ga0307512_10003664163300030522EctomycorrhizaMDLSAGRRRISAEERAKRFMDGRRLYRGEFNHRAAECAARKKAQMFKVAGAAVKEVGTGTGSEESGKEQVNSRRMALQLTVIVLFQML
Ga0307512_10004420113300030522EctomycorrhizaMDLSAGRRRISMEERAKRFMDGRCLCCGGFNHRAAECAARKKAQTFKASGAEVKEVGTGTGSEESGKKQVN
Ga0307512_1000654863300030522EctomycorrhizaMDLRAGRRTSSAEERAQRFVDGRCLYCGGFNHRVADCAARKNAQTFQVAGVEEMEVGTRTGSEESGKD
Ga0307512_1000661783300030522EctomycorrhizaMDLSTGKRKISAEEWAKRFADGSCLYCGGFNHRAAECAARKKAQTSKVSGAEVKEVGTKEGSEESGKD
Ga0307512_1000666793300030522EctomycorrhizaVAGYTGPAPLDLSARRRRLSAEERAKRFTDGRCLYCGGFDHRAAECAARKMAQKSMAAGVEVNDVGTRTRSEESAKESVNSRRMALQLTVKVLFEML
Ga0307512_1001112263300030522EctomycorrhizaMDLSAGMRRISAEERAKRFTDGRCLCCGGFNHRAAECAARKKAQIFKAAGAEVEEVGTATGPEESGKE
Ga0307512_1001227243300030522EctomycorrhizaMDLSRGKRRISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKASGAEVKEVGIKEGPEESGKD
Ga0307512_1001241963300030522EctomycorrhizaMDLSAGRKKISVEERVKRFVDGRSLYCGGFNHRAAECAARKKAQTFKAAGAEVKEVGTGTGSEESGKEQVN
Ga0307512_1001961133300030522EctomycorrhizaMDLSAGKRRISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKASGAEVKEVGTKEGSEESGKD
Ga0307512_1003666213300030522EctomycorrhizaAGKRRISTEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKAAGAEVKEVGTKDGSEESGKN
Ga0307512_1009664033300030522EctomycorrhizaMDLSAGKRRISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKAAGAEVKEVGTKDGSEESGKDQVNPSRMALWLTEKVLF
Ga0307512_1017272723300030522EctomycorrhizaMDLCAGKRRISAEERAKRFADARCLYCGGFNHRAAECAARKKAQTFKVAGAEVKKVGTKDGSEESGKD
Ga0307512_1017770813300030522EctomycorrhizaPAGTVAGYTGPAPMDLSAGRRRISDEERAKRFADGRCLYCGGFNHRAVDCAVRKKARPFKAAGAEVKETEEKEEKGKERVD
Ga0307512_1021738723300030522EctomycorrhizaMDLSAGRRRISDEERAKRFADGRCLYCGGFNHRAAECAARKKARTFKAAGAEVKEVGTKDGSEESGKD
Ga0307512_1030461413300030522EctomycorrhizaMDLSAGRRRISEEERAKRFADGRCLYCGGFNHRAAECAARKKARTFKAAGAEVKEVGTKDGS
Ga0074005_1356810823300030908SoilPMDLSAGKRRISTEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKASGAEVKEVGTKEGSEESGKD
Ga0074003_1010003813300031003SoilMPWAGDLSDLLRGVVRRISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKASGAEVKEVGTGEGSEESGKD
Ga0074003_1010764613300031003SoilYTGPAPMDLSAGKRRISTEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKASGAEVKEVGTKESSEESGKD
Ga0074002_1447930223300031086SoilPMDLSAGRRRIYAEERAKRFADGRCLYCGGFNHRAAVCAARRKAQTFKASGAEVKEVGTKEGSEESGKD
Ga0307502_1006987523300031164SoilSAGRRRISDEERAKRFADGRCLYCCGFNHRAAECAARKNARTFKAAGAEVKEVGTKGGSEESGKD
Ga0307502_1007745923300031164SoilEVAPAGTVAGYTGPAPMDLSAGKKGISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKAAGAEIKEVGTKDGSEESGKD
Ga0307514_100000092413300031649EctomycorrhizaMDPSAGRRRISAEERAKRFADGRCLYCGGFNHRAAECAARMKAETFKAAGEEIDEVGTKEGSEESAKD
Ga0307514_10000032283300031649EctomycorrhizaVPLYFSAAKRRISAEERAKRFADGRCLYCGGFNHRAADCAARKKAQMLKVAGAEIKNVGTKEGPEESGKD
Ga0307514_100000372803300031649EctomycorrhizaVEEKAKRFADGRCLYCGGFNHRAAEYAARKKPKTFKAAGSEVKEVVTKEGSEELGKD
Ga0307514_100000732593300031649EctomycorrhizaMDLSAGKRRILAEERAKRFADGRCLYCGGFNHRAAECAARKKTQTFKASGAEVKEVGTKESSEESGKD
Ga0307514_100000762693300031649EctomycorrhizaMDLSARRGRISAEERAKRFADGRCLYCGGYNHRAVECAERKKAQTFKAAGAEVEEVGTREGSEELGKD
Ga0307514_100001021923300031649EctomycorrhizaMDLIAGRRKISGEERAKRFTDGRCLNCGGFNHRAVDCAVRKKASLLKVAGAEIKEAEGNEGLEGKGTEQVD
Ga0307514_10000102813300031649EctomycorrhizaMDLSTDRRRISDAERAKRFADGRCLYCGGFNQRAVDCAVRKKARLFKAAGEEVKQPEGKEDSREKGKEQVN
Ga0307514_100001062483300031649EctomycorrhizaMAPAGTVPGHTGSAPMDLRAGRRRILAEERAKRFGDGGCLYCGGFNHRAAECTARKKTQTFKASGAEVKEVGTNEGSEEPGKD
Ga0307514_100001121453300031649EctomycorrhizaVDLSAGRRRISDEERAKRFADGWCLYCGGFNHRAVDCAVRKKTSSFRAAGAEVKAVKEGEDTKEKGKEQVE
Ga0307514_100001321983300031649EctomycorrhizaMDLSAGRRKISAEERAKRFADGMCLYCGGFNHRAAECVARKQAQTFKSSGAEVKEVGTKEGSEESGKD
Ga0307514_10000135253300031649EctomycorrhizaMDLSTGRGKILTEQRAKRFANGRCLYWCEFNHRLAECAARSKAHTFKVARAEIEEVGTKEGSEESGKD
Ga0307514_10000158823300031649EctomycorrhizaMDLSAGRSRISDKEKAKRFADGRCLYCGGFNHRAVHCAVRKKARPFKAAGAEVKEAEGKEDAKEKGKERVD
Ga0307514_100002161093300031649EctomycorrhizaMDVSAGRRRISAEKRAKRFPDGRWLYCGWFNHREAECPARKKAQTFKAAGAEIKQVGTREGSEESAKD
Ga0307514_10000216753300031649EctomycorrhizaMHLSEGKRRISTEERVKRFADGRCLYCGGFNHRAAESSARKKAQTFKVAAAEMKEVGTKEGSDESGKDYVNPSRMQLWLMEKVLF
Ga0307514_10000222153300031649EctomycorrhizaLDLTASKRRISAVEMAKRFADGRCCYCGGLNHRVADCAARKKAQTFKAAGAEIKDVGIGSSSKQSGKDEVS
Ga0307514_100002241603300031649EctomycorrhizaMDLSAGRRRISAEERAKRFADRRCLYCGGFDHRTAECAARKKPTTFKVAGAESKEIGTKEGSKESGKD
Ga0307514_100002351413300031649EctomycorrhizaMDFGSGQRRILAEERARRFADGRCLCCGGFNHRVAECAAGKKEQTFKAAEAEVKKVATGTGPEQSGQDLVN
Ga0307514_10000239213300031649EctomycorrhizaMHSSAERRRISAEERAKRFADGRCLYCGGFNHRAAECAARKKAQTFKAAGAEVKEVETKEGSEESGKIKSTQAGWRFG
Ga0307514_10000254453300031649EctomycorrhizaMDLSAGKRRISAEERAKRFADGRCLYCGGFNHRAAECAARKKVQTFKAAGVEIKEVGTNEVSEESGKD
Ga0307514_10000268833300031649EctomycorrhizaMDLSAGRRRISAEESAKRFGDGRCLCCGGFNHRAAECAAREKAQTFKAAGAEIKEVGTKEGSEELGKD
Ga0307514_100002701283300031649EctomycorrhizaMHLSAGRRRISDEERATRFADGRCLYCGGFNHRAVDCAIRKKAQSLKAARAEVKEVGEKEDTREKGKERVD
Ga0307514_10000322943300031649EctomycorrhizaMTPAGTVAAYTGPAPMDLSAGKRRISAEERAKRFTDGRCLYDGGFKHRAAECAARKKDQMFKVAGAEIKEVGTREGSEESGQD
Ga0307514_10000332953300031649EctomycorrhizaMIAGYTRTAPIDLSVCKRRISAEDRAKRFADGRYLYRGGFNHRAAECAARKKAQTFKASGAEVKEVGTKEGSE
Ga0307514_10000642603300031649EctomycorrhizaMDLSAGKGRISAEERAKRFADGRCLYCGGFNHSAAECAARNKAQTFKAAGAEIKEVGTKEGSKELGKD
Ga0307514_10000686243300031649EctomycorrhizaMDLRAGRRRICAEDRAMRFTDGRCLYCGGFNYRAAEYVARKKAPTFKAVEAEMKKVGNGPGSEVSGKELVNRRRMAHQLTIKVLF
Ga0307514_10000787543300031649EctomycorrhizaMDLSAGKSWISAEERAKRFADGRCLYCGRFNHRAAECAARKKAQTFKASGAEVKEVGTEEGFKESGKD
Ga0307514_10000817443300031649EctomycorrhizaLAEERGRKFADGRGLYCGGFNHRAADCAARRKAQMFEAAGAEIKDILTKEGSEESGKD
Ga0307514_1000091033300031649EctomycorrhizaMDLSAVKRIMSPDERAKRFADRRCVYCGGFNHRAAECAARKKAQTFKAAGAEVKEVGTKAGSEEWGKD
Ga0307514_1000093333300031649EctomycorrhizaMDLSADGRRISAEERAKRFADGRCLYCGGFNHRAAECVARKKAQTFKAAGGKVKKVGTKEGSEEAGKD
Ga0307514_10001144283300031649EctomycorrhizaMDLSAGRRRISAEERAKRFADRRCLYCGGFNHRAAECASRKKAQTFKAAGAEVKEVGTKEDSKETGND
Ga0307514_10001185143300031649EctomycorrhizaMDLSAGRRRVLAEERAKRFTDGRCLYSGGFNHRAAECAARKKAQMFKAAGVDVKEVGTKEGSEGSGKD
Ga0307514_10001353343300031649EctomycorrhizaMDRSAGKTRISVEERAKRFADGGCSYGGGFNHISAKRAARKNAQTSQAAGAEIKEVGSKERSEESGKD
Ga0307514_1000303183300031649EctomycorrhizaMDLSAGKRSISAEERAKRFADVRCLYCVGFNNSAAECAARKKAQTFKVAGAEVKEVGTKEHSEDSGKD
Ga0307514_10003294183300031649EctomycorrhizaMDLSACKRMISAEERAKRFTDGRCLYCGGFNHRAAECVARKKAQTFNAAGEEIKEVGTREGSEESGKD


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