Metatranscriptome Family F093202

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093202
Family Type	Metatranscriptome
Number of Sequences	106
Average Sequence Length	162 residues
Representative Sequence	MSAVLGEPLTLGEEQIHRRSGKALLVLPLLIGFALGVFFSPMLNRSEVKEPAITAMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMKAQAREEFSKLDIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWDPAGF
Number of Associated Samples	53
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.49 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (98.113 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (66.981 % of family members)
Environment Ontology (ENVO)	Unclassified (82.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (61.321 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.43% β-sheet: 0.00% Coil/Unstructured: 59.57%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00504	Chloroa_b-bind	0.94
PF00118	Cpn60_TCP1	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
All Organisms	root	All Organisms	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
cellular organisms	root	All Organisms → cellular organisms	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300008833\|Ga0103881_100848	Not Available	509	Open in IMG/M
3300009006\|Ga0103710_10110091	Not Available	693	Open in IMG/M
3300009006\|Ga0103710_10189303	Not Available	561	Open in IMG/M
3300009006\|Ga0103710_10198455	Not Available	551	Open in IMG/M
3300009006\|Ga0103710_10229727	Not Available	521	Open in IMG/M
3300009022\|Ga0103706_10132251	Not Available	603	Open in IMG/M
3300009022\|Ga0103706_10142145	Not Available	588	Open in IMG/M
3300009022\|Ga0103706_10205459	Not Available	516	Open in IMG/M
3300009023\|Ga0103928_10414244	Not Available	527	Open in IMG/M
3300009023\|Ga0103928_10420204	Not Available	524	Open in IMG/M
3300009023\|Ga0103928_10464582	Not Available	503	Open in IMG/M
3300009025\|Ga0103707_10027048	All Organisms → cellular organisms → Eukaryota	904	Open in IMG/M
3300009025\|Ga0103707_10094622	Not Available	625	Open in IMG/M
3300009025\|Ga0103707_10113099	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	594	Open in IMG/M
3300009025\|Ga0103707_10130980	Not Available	570	Open in IMG/M
3300009025\|Ga0103707_10151498	Not Available	548	Open in IMG/M
3300009028\|Ga0103708_100275787	Not Available	524	Open in IMG/M
3300009028\|Ga0103708_100297503	Not Available	512	Open in IMG/M
3300009269\|Ga0103876_1061053	Not Available	554	Open in IMG/M
3300009274\|Ga0103878_1049621	Not Available	502	Open in IMG/M
3300009279\|Ga0103880_10018189	Not Available	787	Open in IMG/M
3300009279\|Ga0103880_10090470	Not Available	500	Open in IMG/M
3300009316\|Ga0103840_100098	Not Available	970	Open in IMG/M
3300009677\|Ga0115104_10876778	Not Available	509	Open in IMG/M
3300010987\|Ga0138324_10606204	Not Available	548	Open in IMG/M
3300018718\|Ga0193385_1044942	Not Available	513	Open in IMG/M
3300018838\|Ga0193302_1076339	Not Available	553	Open in IMG/M
3300018955\|Ga0193379_10220104	Not Available	516	Open in IMG/M
3300019049\|Ga0193082_10453140	Not Available	705	Open in IMG/M
3300019049\|Ga0193082_10705716	Not Available	569	Open in IMG/M
3300019049\|Ga0193082_10717447	Not Available	564	Open in IMG/M
3300019049\|Ga0193082_10739169	Not Available	555	Open in IMG/M
3300021867\|Ga0063130_105573	Not Available	549	Open in IMG/M
3300021880\|Ga0063118_1001123	Not Available	528	Open in IMG/M
3300021883\|Ga0063126_1005138	Not Available	523	Open in IMG/M
3300021891\|Ga0063093_1003395	Not Available	510	Open in IMG/M
3300021895\|Ga0063120_1000750	Not Available	548	Open in IMG/M
3300026495\|Ga0247571_1143064	Not Available	563	Open in IMG/M
3300028137\|Ga0256412_1326060	Not Available	564	Open in IMG/M
3300028137\|Ga0256412_1342851	Not Available	549	Open in IMG/M
3300028137\|Ga0256412_1377629	Not Available	520	Open in IMG/M
3300030749\|Ga0073969_10013833	Not Available	504	Open in IMG/M
3300030750\|Ga0073967_10006255	Not Available	679	Open in IMG/M
3300030750\|Ga0073967_12035846	Not Available	615	Open in IMG/M
3300030752\|Ga0073953_10001342	Not Available	520	Open in IMG/M
3300030752\|Ga0073953_10002962	Not Available	568	Open in IMG/M
3300030752\|Ga0073953_10007911	Not Available	536	Open in IMG/M
3300030752\|Ga0073953_11478862	Not Available	540	Open in IMG/M
3300030752\|Ga0073953_11490877	Not Available	526	Open in IMG/M
3300030756\|Ga0073968_10005610	Not Available	507	Open in IMG/M
3300030756\|Ga0073968_11910828	Not Available	501	Open in IMG/M
3300030780\|Ga0073988_12281875	Not Available	526	Open in IMG/M
3300030781\|Ga0073982_11629234	Not Available	513	Open in IMG/M
3300030786\|Ga0073966_11735375	Not Available	535	Open in IMG/M
3300030787\|Ga0073965_10017105	Not Available	525	Open in IMG/M
3300030787\|Ga0073965_10020261	Not Available	562	Open in IMG/M
3300030787\|Ga0073965_11748526	Not Available	517	Open in IMG/M
3300030787\|Ga0073965_11781321	Not Available	504	Open in IMG/M
3300030787\|Ga0073965_11782887	Not Available	535	Open in IMG/M
3300030788\|Ga0073964_10012257	Not Available	524	Open in IMG/M
3300030788\|Ga0073964_11698510	Not Available	500	Open in IMG/M
3300030859\|Ga0073963_11540211	Not Available	565	Open in IMG/M
3300030918\|Ga0073985_10000795	Not Available	537	Open in IMG/M
3300030919\|Ga0073970_11324976	Not Available	586	Open in IMG/M
3300030919\|Ga0073970_11381397	Not Available	522	Open in IMG/M
3300030919\|Ga0073970_11412355	Not Available	555	Open in IMG/M
3300030921\|Ga0073951_10002160	Not Available	533	Open in IMG/M
3300030921\|Ga0073951_10011797	Not Available	566	Open in IMG/M
3300030921\|Ga0073951_11342932	Not Available	524	Open in IMG/M
3300030924\|Ga0138348_1039354	Not Available	524	Open in IMG/M
3300030924\|Ga0138348_1078330	Not Available	518	Open in IMG/M
3300030924\|Ga0138348_1136672	Not Available	570	Open in IMG/M
3300030924\|Ga0138348_1165887	Not Available	605	Open in IMG/M
3300030924\|Ga0138348_1212591	Not Available	528	Open in IMG/M
3300030924\|Ga0138348_1234212	Not Available	540	Open in IMG/M
3300030924\|Ga0138348_1280194	Not Available	556	Open in IMG/M
3300030924\|Ga0138348_1327736	Not Available	615	Open in IMG/M
3300030924\|Ga0138348_1506448	Not Available	512	Open in IMG/M
3300030924\|Ga0138348_1598856	Not Available	572	Open in IMG/M
3300030951\|Ga0073937_12081535	Not Available	561	Open in IMG/M
3300030953\|Ga0073941_12140263	Not Available	519	Open in IMG/M
3300030955\|Ga0073943_11597410	Not Available	514	Open in IMG/M
3300030958\|Ga0073971_11215704	Not Available	599	Open in IMG/M
3300030961\|Ga0151491_1237355	Not Available	562	Open in IMG/M
3300030961\|Ga0151491_1257925	Not Available	564	Open in IMG/M
3300031037\|Ga0073979_12416710	Not Available	527	Open in IMG/M
3300031056\|Ga0138346_10175604	Not Available	500	Open in IMG/M
3300031056\|Ga0138346_10374386	Not Available	537	Open in IMG/M
3300031063\|Ga0073961_10015655	Not Available	527	Open in IMG/M
3300031063\|Ga0073961_10025085	Not Available	576	Open in IMG/M
3300031063\|Ga0073961_12247517	Not Available	554	Open in IMG/M
3300031113\|Ga0138347_10594415	Not Available	580	Open in IMG/M
3300031120\|Ga0073958_10001350	Not Available	573	Open in IMG/M
3300031120\|Ga0073958_10041575	Not Available	541	Open in IMG/M
3300031120\|Ga0073958_11594876	Not Available	623	Open in IMG/M
3300031120\|Ga0073958_11598012	Not Available	544	Open in IMG/M
3300031120\|Ga0073958_11605261	Not Available	537	Open in IMG/M
3300031121\|Ga0138345_10399697	Not Available	506	Open in IMG/M
3300031126\|Ga0073962_10022765	Not Available	546	Open in IMG/M
3300031445\|Ga0073952_10029281	Not Available	509	Open in IMG/M
3300031465\|Ga0073954_10000284	Not Available	563	Open in IMG/M
3300031465\|Ga0073954_10015015	Not Available	555	Open in IMG/M
3300031465\|Ga0073954_10016877	Not Available	544	Open in IMG/M
3300031739\|Ga0307383_10597740	Not Available	556	Open in IMG/M
3300031739\|Ga0307383_10644149	Not Available	537	Open in IMG/M
3300031743\|Ga0307382_10501630	Not Available	556	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.06%
Freshwater	Environmental → Aquatic → Freshwater	0.94%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	84.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.55%
Coastal	Environmental → Aquatic → Marine → Coastal	6.60%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	84.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.55%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.60%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	66.98%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	13.21%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	7.55%
Surface Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Surface Ocean Water	4.72%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	3.77%
Coastal Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Coastal Water	2.83%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300008833	Eukaryotic communities of water from the North Atlantic ocean - ACM7	Environmental	Open in IMG/M
3300009006	Eukaryotic communities from seawater of the North Pacific Subtropical Gyre - HoeDylan_E2	Environmental	Open in IMG/M
3300009022	Eukaryotic communities from seawater of the North Pacific Subtropical Gyre - HoeDylan_S1	Environmental	Open in IMG/M
3300009023	Planktonic microbial communities from coastal waters of California, USA - Canon-29	Environmental	Open in IMG/M
3300009025	Eukaryotic communities from seawater of the North Pacific Subtropical Gyre - HoeDylan_S2	Environmental	Open in IMG/M
3300009028	Eukaryotic communities from seawater of the North Pacific Subtropical Gyre - HoeDylan_S3	Environmental	Open in IMG/M
3300009269	Eukaryotic communities of water from the North Atlantic ocean - ACM28	Environmental	Open in IMG/M
3300009274	Eukaryotic communities of water from the North Atlantic ocean - ACM10	Environmental	Open in IMG/M
3300009279	Eukaryotic communities of water from the North Atlantic ocean - ACM42	Environmental	Open in IMG/M
3300009316	Microbial communities of water from the North Atlantic ocean - ACM15	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010987	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Antarctic Ocean - ANT-7 (Eukaryote Community Metatranscriptome) (version 6)	Environmental	Open in IMG/M
3300018718	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_123 - TARA_N000001994 (ERX1789426-ERR1719437)	Environmental	Open in IMG/M
3300018838	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_102 - TARA_N000001646 (ERX1789439-ERR1719515)	Environmental	Open in IMG/M
3300018955	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_123 - TARA_N000001972 (ERX1789369-ERR1719393)	Environmental	Open in IMG/M
3300019049	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_064 - TARA_N000000531 (ERX1782179-ERR1712232)	Environmental	Open in IMG/M
3300021867	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S3 C1 B8 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021880	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Antarctic Ocean - ANT-11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021883	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S0 C1 B9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021891	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-20M (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021895	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Antarctic Ocean - ANT-13 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300026495	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 24R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028137	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030749	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_V_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030750	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_T_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030752	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E5_S_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030756	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_T_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030780	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_S19_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030781	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_S7_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030786	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_S_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030787	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_S_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030788	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_R_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030859	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_R_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030918	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_S14_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030919	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_V_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030921	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E5_R_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030924	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E5_V_5 metaT (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030951	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E4_Q_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E4_S_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030955	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E4_T_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030958	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_X_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030961	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E7_Q_0.2 metaT (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031037	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_S2_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031056	Marine microbial communities from the Southern Atlantic ocean transect - DeepDOM_S12_Trap_metaT (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031063	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_Q_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031113	Marine microbial communities from the Southern Atlantic ocean transect - DeepDOM_S7_Trap_metaT (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031120	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E5_V_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031121	Marine microbial communities from the Southern Atlantic ocean transect - DeepDOM_S15_Trap_metaT (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031126	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_Q_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031445	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E5_R_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031465	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E5_S_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031739	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031743	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0103881_1008481	3300008833	Surface Ocean Water	MYKELGEEQPRSGKTLLGVSLLMGFALGVFVSPVLFARSKADEPAINMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEYEKLDHATQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFAKDE
Ga0103710_101100911	3300009006	Ocean Water	MAGRGTALAAEAMYKELGEESIHRGTWCSGKTLLASSLLIGFALGVFVSPALFTHSEAGESAVNMMASPMSMTCLRVPALSVNAMQNTLRKNGVPPSPMERFALTSFAATRNPSMKAQAKEEFSKLDYLTQSKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKDEE
Ga0103710_101893031	3300009006	Ocean Water	MYKELGEEQIHRGSGKTVLALSLLMGFAVGVFVSPALFTRREAGEPAINMMGSPMSMTCLRVPALSVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMRAQAKEEFSKLDLVTQAKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKDEESVAQYRRAE
Ga0103710_101984551	3300009006	Ocean Water	MSAVLGEPLTLGEEQIHRRNGKALLVLPLLIGFALGVFFSPMLKRSEVKEPAITAMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMKAQAREEFSKLDLETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWDPAG
Ga0103710_102297271	3300009006	Ocean Water	MDKLLGEEQTHRVPLYSGKTLLGGSLLIGFALGVFVSPVLFTRSEVEKPAMNMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEFERLDHVTQTKLKQLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAG
Ga0103706_101322511	3300009022	Ocean Water	MSKPSALLDEPLSMGQETIPRAPWCAGKAFLLFPFLIGFVFAVYVSPALFTRSDVEQVSINMRASPMSGISCHRVPAISVNAMQNTLRKNGVPFDPMEKFALTSFAATRDVSMKAQAREEFSKLDPVTQSKLKKLSKDLVVRAAGFSLEDAPGVSAPLGFWDPAGFAKDEESFLAYRRAEIK
Ga0103706_101421451	3300009022	Ocean Water	MSAILGEPLTLGEEQIHRRSGKALLVLPLLIGFALGVFFSPVLNNSEVKEPAITTMASPMSISCLQVPAMSVNAMQGVLRKNGIPSNPMEKFALTSFAATRNPSMKAQAREEFSKLDLETQAKLKALSKDLVVRATRSSFDPEDMAGVSAPLGFWDPAGFAKDEESVAQYRRAE
Ga0103706_102054591	3300009022	Ocean Water	MPAEKCSGKALFVLSLLIGFVLGVFFSPAVFTRGEVQEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPFSPMEKFALTSFAATRNPAMRAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWGPA
Ga0103928_104142441	3300009023	Coastal Water	MSAVLGEPLTLGEEQIQRRSFGGKALLVLPLLLGFALGVFFSPVVLTRSAVEEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPALRAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGF
Ga0103928_104202041	3300009023	Coastal Water	MSTVLGEPLTLGEEQIHRRGGKALLVLPLLVGFALGVFFSPVVLTRGEVQEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPALRAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGF
Ga0103928_104645821	3300009023	Coastal Water	MYKELGEEQPRSGKTLLGVSLLMGFALGVFVSPVLFARSKADEPAINMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEFEKLDHATQSKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFW
Ga0103707_100270482	3300009025	Ocean Water	GTMSKPTALLAEPLSMGQETIPRGTLCSGKAFLFFPFLIGFVCAVFVSSVLLNRSEVNESAINMKVSPLSTMSCLRVPEVSVSTMQNTLRKNGIPSSPMEKFALTSFAAMRDVSMKAQAREEFSKLDQGTQAKLTKLSKDLVVRAATFDPEDMPGITAPLGYFDPLGLGKDEKRFSLFRRAETFSPRFLMNINWSTAAPHTGR*
Ga0103707_100946221	3300009025	Ocean Water	MYKELGEESIHRGTWCSGKTLLACSLLIGFALGVFVSPALFTHSDAGESAVNMMASPMSMTCLRVPALSVNAMQNTLRKNGVPPSPMERFALTSFAATRNPSMKAQAKEEFSKLDYLTQSKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAG
Ga0103707_101130991	3300009025	Ocean Water	MSAVLGEPLTLGEEQIHRRSGKALLVLPLLIGFALGVFFSPMLSHSEVKEPAITTMASPMSISCLQVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPSMKAQAREEFSKLDHETQAKLKKLSKDLVVKAAAFDVEDQPGITAPLGFFDPAGFTDDITESRFNAYRRAEIK
Ga0103707_101309801	3300009025	Ocean Water	MGQETIPRGTLCSGKTFLFFPFLIGFVFAVFFSPVLFTSEVEEPSISMAAAQMGLSCHQVPAISVNAMQNALRKNGIPQNPMEKFALTSYASIRDPSMKAQAQEEFAKLDQATQAKLKGLSKDLVVRAGAFRLEDMPGVTAPLGVPGEKAWDPWGLMEDGNQLKF
Ga0103707_101514981	3300009025	Ocean Water	MSAVLGEPLTLGEEQIQRRSFSGKALLILPLFIGFALGVFFSPVVLTRSEVEEPAITTMASPTSISCLKVPAMSVNAMQSVLRKNGVPSSPMEKFALTSFAATRNPAMRAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPAGFAKDEE
Ga0103708_1002757871	3300009028	Ocean Water	MSAVLGEPLTLGEEQIQRRSFSGKALLILPLFVGFALGVFFSPVVLTRSEVEEPAISTMASPMSISCLRVPAMSVNAMQSTLRKNGVPPSPMEKFALTSFAAMREVSMKAQAKEEFSKLDPATQSKLKKLTKEVVVRAATLSPEKMPGVLAPLGF
Ga0103708_1002975031	3300009028	Ocean Water	SRRSRIVFKLQGTMNKAEPNGKTLVLFSLLIGLLSGVFFSTVLFNRREVEEPAINMGASPMSMSCLRVPAMSVTAMQNILRKNGVPYNPMEKFALTSFAATRDVSMRAQAKEEFAKLDHVTQSKLKQLSKDMVVRAAAFNAEDMPGVSAPLGFWDPAGFAKDEESFTKHR
Ga0103876_10610531	3300009269	Surface Ocean Water	MVLGQGTDHHRGGKALLAPPLVIRFAFGVFRSPLPYCSDVKAPAIITLALLTSISCLRVPLMSVNAMQGVLRKNGVPSSPMEKFALTSFAAMRDVSLKAQAQEEFSKLDHETQSKLQKLSKEVVVRAGAFRLEDMPGVS
Ga0103878_10496211	3300009274	Surface Ocean Water	MSTLLAEPLSMGQETIPRSGKAFLIFPFLIGFVFAVFVSPVLFTQEPAINMLGQKLPAAQCPIQLTCLRVPAMSVQAMQNTLRKNGIPSSPLEKFALTSFAATRDISMRAQAKEEFSKLDHETQAKLKKLSKDLVVRASAFRLEDMPGVSAPLGVP
Ga0103880_100181891	3300009279	Surface Ocean Water	PAVLTRSEVQEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPPSPMERFALTSFVATRDVSMRAQAKEEFAKLDQESKAKLKKLSKDLIVRASAFRIEDMPGVSAPLGVPGESIWDPAGLAKGIDAEKFSTYRQLHHLSASHFIGNVC*
Ga0103880_100904701	3300009279	Surface Ocean Water	MSAVLGEPLTLGEEQIHRRSGKAFLVLPLLIGFALGVFFSPVLNHSEVKEPAITAMASPASISCLRVPAMSVNAMQGVLRKNGVAASPMEKFALTSFAATRDPSMKAQAREEFAKLPVETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLG
Ga0103840_1000981	3300009316	River Water	MSAVLGEPLTLGEEQIHRRSGKAFLVLPLLIGFALGVFFSPVLNHSEVKEPAITAMASPASISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMKAQAREEFAKLPVETQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPA
Ga0115104_108767781	3300009677	Marine	MSAVLDEPLTLGEEQIHRRSGKAFLVLPLLIGFALGVFFSPVLNQSEVKEPAITTMASPMSISCLQVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPAMRAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPAGFAKDE
Ga0138324_106062041	3300010987	Marine	MYKEMGEEQTHRGTWFGGKTLLASSLLIGFALGVFVSPALFTRSGGAKPAVNMMASPMSMTCLRVPALSVSAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMRAQAKEELAKLDHVTQTKLKKLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFAK
Ga0193385_10449421	3300018718	Marine	MSALLAEPLSMGQEPISRGSGKTFLLVPFLVGFVFAVFVSTRSEVNEPAINMMASPMSVSCLRVPAMSVNAMQNTLRKNGVPSSPMEKFALTSFAAARNPSMRALAKEEFAKLDHVTQAKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKDE
Ga0193302_10763391	3300018838	Marine	MSAVLGEPLTLGEEQIQRRSFSGKALLILPLLIGFVLGVFFSPVVLTHSQVEEPAITTMASPTSISCLKVPAMSVNAMQSVLRKNGVPSSPMEKFALTSFAATRNPAMKAQAREEFSKLDHETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPAGFAKDEESVLQYRRAEI
Ga0193379_102201041	3300018955	Marine	MSALLAEPLSMGQEPISRGSGKTFLLVPFLVGFVFAVFVSTRSEVNEPAINMMASPMSVSCLRVPAMSVNAMQNTLRKNGVPSSPMEKFALTSFAAARNPSMRALAKEEFAKLDHVTQAKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKDEE
Ga0193082_104531402	3300019049	Marine	HGLSLLIGFALGVFFSPAVLTRSKVQEPAISTIASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFASTSFAATRNPAMKAQAREEFSKLDYETQAKLKALSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKDEESVAQYRRAEISRPCLHVFIFGYACCR
Ga0193082_107057161	3300019049	Marine	MDKLLGEEQTHRVPLYSGKTLLGGSLLIGFALGVFVSPVLFTRSEVEKPAMNMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEFEKLPYVTQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFAKDEESVA
Ga0193082_107174471	3300019049	Marine	MQKPLVEPTSMSQETSPRGKAFLLLPFVAGFVLAVVGSPILFNRSEVEEPTINMGASAMSISCLRVPAMSVTAMQNILRKNGVAYSPMEKFALTSFAATRDVSMKAQAKEEFSKLDYETQTKLNKLSKDLVVRATTARRTVAGRARGFDPEDMPGVSAPLGFWDPA
Ga0193082_107391691	3300019049	Marine	MGQETIPRATLFAGKAFLLFPFLIGFVFAVYVSPALFTRSDVEQVSINMRASPMSGISCHQVPAISVNAMQNTLRKNGVPFDPMEKFALTSFAAQRDPSMRAQAREEFSKLDHVTQAKLKKLSKDVVVRAAAFNVEDQPGITAPLG
Ga0063130_1055731	3300021867	Marine	MDKLLGEEQTHRVPLYSGKTLLGGSLLIGFALGVFVSPVLFTRSEVEKPAMNMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEFSKLPYDTQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0063118_10011231	3300021880	Marine	MDKLLGEEQTHRVPLYSGKTLLGGSLLIGFALGVFVSPVLFTRSEVEKPAMNMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKDEFEKLDYVTQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFA
Ga0063126_10051381	3300021883	Marine	MDKLLGEEQTHRVPLYSGKTLLGGSLLIGFALGVFVSPVLFTRSEVEKPAMNMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKDEFEKLDYVTQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAG
Ga0063093_10033951	3300021891	Marine	MYKELGEEQTRSGKTLLAFSLLMGFALGVFVSPVLFNRSKADEPAINMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEFEKLDRVTQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPA
Ga0063120_10007501	3300021895	Marine	MSAVLGEPLTLGEEQIHRRSGKAFLVLPLLIGFALGVFFSPVLNHSEVKEPAITAMASPASISCLRVPAMSVNAMQGVLRKNGVAASPMEKFALTSFAATRDPSMKAQAREEFAKLPVETQAKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFAKDEES
Ga0247571_11430641	3300026495	Seawater	MSAVLGEPLTLGEEQIHRRSGKALLVLPLLIGFALGVFFSPVLSHSEVREPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVAPSPMEKFALTSFAATRDPSMKAQAREEFSKLPIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0256412_13260601	3300028137	Seawater	MSAVLGEPLTLGEEQIHRRSGKAFLVLPLLIGFALGVFFSPVLNHSEVKEPAITAMASPASISCLRVPAMSVNAMQGVLRKNGVAASPMEKFALTSFAATRDPSMKAQAREEFAKLPVETQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFAKDEESVAQY
Ga0256412_13428511	3300028137	Seawater	SSGAQSTVDVRRHRREGPLAMSALLDEPLSMGQEQIHRGSGKLFLVVPLLIGFVLAVFVSPALFTRSEVEEPAINMMASPMGMTCARVPAMSVGAMQNTLRKNGVPPSPMEKFALTSFVAVRDPSMKAQAKEEFAKLPADTQSKLKLLSKELVVRAAKSSFSPEDMAGVSAPLGFWDPAGLA
Ga0256412_13776291	3300028137	Seawater	KDQALINQSLAFAGVRSVVLLVETMYKELGEEQPRSGKTLLAFSLLMGFALGVFVSPLLFARNKAEEPAINMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEFAKLDHVTQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPA
Ga0073969_100138331	3300030749	Marine	MDTLLGEEQTHRVPSYSGKTLLAFSLLIGFALGVFVSPALFTRSEVEEPAMNMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEFAKLDSVTQTKLKQLSKDLVVRAAAFSPEDMAGVS
Ga0073967_100062551	3300030750	Marine	MYKELGEEQTRSGKTLLGVSLLLGFALGVFVSPVLFTRSKGEEPAINMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEFAKLDSVTQTKLKQLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0073967_120358461	3300030750	Marine	LKSSGAQSTVDVRRHRREGPLAMSALLDEPLSMGQEQIHRGSGKLFLLVPLLVGFFLAVFVSPALFTSSEVEEPAINMMASPMGMTCARVPAMSVGAMQNTLRKNGVPPSPMEKFALTSFVAVRDPSMKAQAKEEFSKLDVETQSKLKKLSKELVVRAARSSFSPEDMAGVSPPLGFWDPAGLASSNPAGFESQEEKLAQYRRAE
Ga0073953_100013421	3300030752	Marine	MSAVLGEPLTLGEEQIHRRSGKAVLVLPLLIGFALGVFFSPVLSHSEVKEPAITTMASPMSISCLRVPAMSVNAMQGVLRKNGVPASPMEKFALTSFAATRDPSMKAQAREEFSKLDLETQAKLKALSKDLVVRATRSSFDPEDMAGVSAPLGFWDPA
Ga0073953_100029621	3300030752	Marine	MSEALLGQEQTHRGGKALLVLPLVIGFTLGVFFSPVLLNRSEVETPAINMMGAPRGGMTCLKVPTLSVNALQNTLRKNGVPPSPMERFALTSFVATRDVSMKAQAKQEFSKLDPMTQSKLKKLSKDLVVRAAAFDLEDAPGVSAPLGFWDPAGFAKDEESFL
Ga0073953_100079111	3300030752	Marine	LSMGQEQIQRGSGKLFLLLPLLMGFVLAVFVSPIVFTRSEVEVPAIDMMASPMGMTCARVPAMSVGAMQNTLRKNGVPPSPMEKFALTSFVAVRDPSMKAQAKEEFSKLDVETQSKLKKLSKELVVRAARSSFSPEDMAGVSPPLGFWDPAGLASSNPAGFESQEEKLAQYRRAEIKH
Ga0073953_114788621	3300030752	Marine	GAQSTVDVRRQRREGPLAMSALLDEPLSMGQEQIRRGSGKLFLLVPLLVGFVLAVFVSPALFTSSEVEEPAINMMASPMGMTCARVPAMSVGAMQNTLRKNGVPPGPMEKFALTSFVAVRDRDPSMKAQAKEEFAKLPADTQSKLKLLSKELVVRAAKSSFSPEDMAGVSAPLGFWDPAG
Ga0073953_114908771	3300030752	Marine	FQLSRTMSAVLGEPLTLGEEQIQRRSFGGKALLVLPLLLGFAFGVFFSPVVLTRSAVEEPAITTMASPTSISCLKVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPAMKAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPAGFAKDEE
Ga0073968_100056101	3300030756	Marine	MSAVLGEPLTLGEEQIHRRSGKALLVLPLLIGFALGVFLSPVLSHSEVREPAITTMASPTSISCLRVPVMSVNAMQGVLRKNGVASSPMEKFALTSFAATRDPSMKAQAREEFSKLPIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWD
Ga0073968_119108281	3300030756	Marine	LVRIGLIQFPLLIGFGLGVFFSPVLFSRGEVEEPALNMMASPTGMTCLRAPTLSVNAMQNTLRKNGVPPSPMEKFALTSFAATRDVSMKAQAREEFSKLDPVTQGKLKKLSKDLVVRAAGFSLEDAPGVSAPLGFWDPAGF
Ga0073988_122818751	3300030780	Marine	AKEDLLTSGAMSTYAVLGEPSTLGEEQVRHRGGKALLVLPLLIGFALGVFFSPVVLTRGEVQEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPAMRAQAREEFSKLDYETQAKLKALSKDLVVRATRSSFDPEDMAGVSAPLGFWDPAGFAK
Ga0073982_116292341	3300030781	Marine	MSTNAVLGEPLTLGEEQIHRRGGKALLVLPLLVGFALGVFFSPVVLTRGEVQEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPALRAQAREEFSKLDYETQAKLQALSKDLVVRATRSAFDP
Ga0073966_117353751	3300030786	Marine	MSEALLGQEQTHRGGKALLVLPLVIGFTLGVFFSPVLLNRSEVETPAINMMGAPRGGMTCLKVPTLSVNALQSTLRKNGVPPSPMERFALTSFVATRDVSMKAQAKQEFSKLDPMTQSKLKKLSKDLVVRAAAFDLEDAPGVSAPLGFWDPAGFAKD
Ga0073965_100171051	3300030787	Marine	MSAVLGEPLTLGEEQIHRRNGKALLVLPLLIGFALGVFFSPMLKRSEVKEPAITAMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMKAQAREEFSKLDIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWDPAGFA
Ga0073965_100202611	3300030787	Marine	MSAVLGEPLTLGEEQIHRRNGKALLVLPLLIGFALGVFFSPMLNRSEVKEPAITAMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMRAQAREEFSKLDIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0073965_117485261	3300030787	Marine	SEYQTLGEEQTRGGKALLVRIGLIQFPLLIGFALGVFFSPVLFSRGEVEEPALNMMASPTGMTCLRAPTLSVNAMQNTLRKNGVPPSPMEKFALTSFAATRDVSMKAQAREEFSKLDHETQAKLKMLSKDLVVKAAAFDVEDQPGITAPLGFFDPAGFTNDITEDRFNAYRR
Ga0073965_117813211	3300030787	Marine	MYQELGQEQTHRGGKALLVLPLLIGFALGVFFSPVLLNRSEVKTPAINMLAGPSSMTCLRVPTLSVNALQSTLRKNGVPPSPMERFALTSFVATRDVSMKAQAKQEFSKLDPVTQSKLKKLSKDLVVRSAAFDLEDAPGVSAPLGFWDPAGFAKDEESFLAYRRAEI
Ga0073965_117828871	3300030787	Marine	MSDPLTLGQEKIHRGTFCGGKALLALPLLVGFALGVFFSPVLLTRSEVETPAINMMGAPGMTCLRAPTLSVNALQSTLRKNGVPPSPMERFALTSFVATRDVSMKAQAKQEFSKLDLVTQSKLKKLSKDLVVRAATFDLEDAPGVSAPLGFWDPAGFAKDEESFLAYR
Ga0073964_100122571	3300030788	Marine	MSAVLGEPLTLGEEQIHRRSGKAFLVLPLLIGFALGVFFSPVLNHSEVKEPAITAMASPASISCLRVPAMSVNAMQGVLRKNGVAASPMEKFALTSFAATRDPSMKAQAREEFAKLPVETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWD
Ga0073964_116985101	3300030788	Marine	MSKPTALLDEPLSMGQEQIHRGSGKLFLVVPLLIGFVLAVFVSPALFTRSEVEEPAINMMASPMGMTCARVPAMSVGAMQNTLRKNGVPPSPMEKFALTSFVAVRDPSMKAQANEEFSKLDRETQTKLKKLSKELVVRAARSSFS
Ga0073963_115402111	3300030859	Marine	MSTNAVLGEPLTLGEEQIHRRSGKAFLVLPLLIGFALGVFFSPVLNRSEVKEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVAPSPMEKFALTSFAATRDPSMKAQARDEFSKLPIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLG
Ga0073985_100007951	3300030918	Marine	MSAVLGEPLTLGEEQVQRRSFGGKALLVLPLLLGFALGVFFSPVVLTRSAVEEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPALRAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPA
Ga0073970_113249761	3300030919	Marine	MSKPTALLDEPLSMGQEQIHRGSGKLFLVVPLLIGFALAVFVSPVLFARSEVEEPGINMMASPMGMTCARVPAMSVGAMQNTLRKNGVPPSPMEKFALTSFVAVRDPSMKAQAKEEFSKLDMETQTKLKKLSKELVVRAARSSFSPEDMAGVSAPLGFWDPAGLASTNPAGYES
Ga0073970_113813971	3300030919	Marine	MSEALLGQEQTHRGGKALLVLPLVIGFTLGVFFSPVLLNRSEVETPAINMMGAPRGGMTCLKVPTLSVNALQSTLRKNGVPPSPMERFALTSFVATRDVSMKAQAKQEFSKLDPMTQSKLKKLSKDLVVRAAAFDLEDAPGVSAPLGFWDPAGFAKDEESFLAYRR
Ga0073970_114123551	3300030919	Marine	MYKELGEEQPRSGKTLLGVSLLMGFALGVFVSPVLFTRSKGEEPAINMMASPMSMTCLRVPAISVNAMQSTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKDEFAKLDHVTQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDP
Ga0073951_100021601	3300030921	Marine	MSTHAVLGEPLTLGEEQIHRRGGKALLVLPLLVGFALGVFFSPVVLTRGEVQEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPALKAQAREEFSKLDDETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPA
Ga0073951_100117971	3300030921	Marine	MYKELGEEQIHRGSGKTVLALSLLMGFALGVFVSPALFTRREAGEPAINMMGSPMSMTCLRVPALSVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMRAQAKEEFSKLDLVTQAKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKDEESVAQYRRAEIK
Ga0073951_113429321	3300030921	Marine	MYKELGEENIHRGTWCSGKTLLASSLLIGFALGVFVSPALFTHSEAGESAVNMMASPMSMTCLRVPALSVNAMQNTLRKNGVPPSPMERFALTSFAATRNPSMKAQAKEEFSKLDYLTQSKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKD
Ga0138348_10393541	3300030924	Marine	MSAVLGGRLSLDEEQIHRRSGNALLVLPLLIGFALGVFFSPVVLRSEVETPAINMMASPMSISCLRVPAVSVNAMQNTLRKNGIPPSPMEKFALTSFAATRNPSMRAQAKEEFSKLDLVTQAKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPA
Ga0138348_10783301	3300030924	Marine	MSAVLGEPLTLGEEQIQRRSFSGKALLILPLLIGFVLGVFFSPVVLTRSQVEEPAITTMASPTSISCLKVPAMSVNAMQSVLRKNGVPSSPMEKFALTSFAATRNPAMKAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAP
Ga0138348_11366721	3300030924	Marine	MSAILGEPLTLGEEQIHRRSGKALLVLPLFIGFALGVFFSPMLNRSVVKEPAITAMASPTSISCLRVPAMSVSAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMKAQAREEFSKLDIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0138348_11658871	3300030924	Marine	MYKELGEEHTLRGASCGGKTFLAFSLLIGFALGVFVSPVLFTRSEAEEPAINMMASPMGMTCLRVPAISVNAMQNTLRKNGVPPSPMERFALTSFAATRNPSMRAQAKEEFAKLDHVTQTKLKKLSKDLVVRAAAFDPEDMA
Ga0138348_12125911	3300030924	Marine	MYKELGEEQTRSGKTLLAFSLLMGFALGVFVSPVLFTGSKGEEPAINMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKEEFAKLDSVTQTKLKQLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAK
Ga0138348_12342121	3300030924	Marine	LTLGEEQIQRRSLSGKALLILPLFIGFALGVFFSPVVLTRSDVEEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPAMRAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDP
Ga0138348_12801941	3300030924	Marine	LALPLLVGFALGVFFSPVLLNRSEVETPAINMMGGPSSITCLRVPTLSVNALQSTLRKNGVPPSPMERFALTSFIATRDVSMKAQAKEEFAKLDPMTQSKLKKLSKDLVVRAATFDLEDAPGVSAPLGFWDPAGFAK
Ga0138348_13277361	3300030924	Marine	LKIRCPSINHWRSLLRTKVLSFVETMYKEFGEEDVQRGTSSRGKIVLASSLVIGFALGVFVSPALFTRNEVEEPATNMMASPMSGMTCARVPAMSVGAMQNVLRKNGVPPSPMEKFALTSFVAVRNPSMKAQAKEEFSKLDASTQSKLKQLSKELVVRAARSSFDPEDMAGVSPPLGFWDPAGLASTNPAGFDSQEEKLAQYRR
Ga0138348_15064481	3300030924	Marine	MYKELGEENIHRGTWCSGKALLAFSLLIGFALGVFVSPVLFTRSEAEEPAINMMASPMSMTCLRVPALSVSAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMRAQAKEEFAKLDHVTQTKLKKLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFAKDEESVAQ
Ga0138348_15988561	3300030924	Marine	LVLPLLLGFALGVFFSPIVLTRSAVEEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPALRAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPAGFAKDEESVLQYRRAE
Ga0073937_120815351	3300030951	Marine	MSAILAEPLTVGEEQIQRRSGKALLVLPLVMGFALGVFFSPVVLSHGEVEEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPAMKAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPAGF
Ga0073941_121402631	3300030953	Marine	MYKPLAEPTSMGQETSARGKAFLMLPFIAGFVLAVFASPVLFNRSEVEEPAINMGASPMSISCLRVPAMSVTAMQNILRKNGVPYSPMEKFALTSFAATRDVTMRAQAKEEFSKLDHETQTKLKKLSKDVVVRAGAFNPEDMPGVSGPLGFWDPAG
Ga0073943_115974101	3300030955	Marine	LIGFALGVFVSPVLFTRSEVEKPAMNMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPAMKAQARDEFSKLDPVTQGKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGF
Ga0073971_112157041	3300030958	Marine	MYKEFGEEDFQRGKFSSGKIVLASSLLVGFALGVFVSPILFTRSDVDEPAANMMASPMSGMTCARVPAMSVAAMQNVLRKNGVPPSPMEKFALTSFVAVRNPSMKAQAKEEFSKLDASTQTKIKQLSKELVVRAARSSFDPEDMAGVSPPLGFWDPAGLASTNPAGFDSQEEKLAQYRRAEIK
Ga0151491_12373551	3300030961	Marine	MSAVLGEPLTLGEEQIHRRSGKAFLVLPLLIGFALGVFFSPVLNHSEVKEPAITAMASPASISCLRVPAMSVNAMQGVLRKNGVAASPMEKFALTSFAATRDPSMKAQAREEFAKLPVETQAKLKALSKDLVVRAASFSPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0151491_12579251	3300030961	Marine	MYKELGEEQPRSGKTLLGVSLLMGFALGVFVSPVLFARSKADEPAINMMASPMSMTCLRVPAISVNAMQNTLRKNGVPSSPMEKFALTSFAATRNPSMKAQAKEEYEKLDHATQKKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFAKDEESVAQYRRAEI
Ga0073979_124167101	3300031037	Marine	GTMSKPTALLAEPLSMGQETIPRGTWCSGKTFLFLPFLIGFVFAVFVSPVLFTQSEVEEPAINMQASPLKMMSCKRVPAISVSAMQNTLRKNGIPSSPMEKFALTSFSAMRDVSMRAQAKEEFSKLDYGTQEKLKKMSKDLVVRASAFRLEDMPGVSAPLGVPGESIWDPAGLAN
Ga0138346_101756041	3300031056	Marine	MYQELGQEQTHRGGKALLVLPLLIGFALGVFFSPVLLNRSEVKTPAINMLAGPSSMTCLRVPTLSVNALQSTLRKNGVPPSPMERFALTSFVATRDVSMKAQAKQEFSKLDPVTQSKLKKLSKDLVVRAATFDLEDAPGVSAPLGFWDP
Ga0138346_103743861	3300031056	Marine	MSAVLGEPLTLGEEQIQRRTLCGGKALLVLPLLIGFALGVFFSPAVLTRSEVEEPAMSMMASPTSISCLRVPAMSVNAMQSTLRKNGVPSHPMERFALTSFAAVRNPSMKAQAREEFSKLDLETQGKLKALSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0073961_100156551	3300031063	Marine	MYKELGEEQPRSGKILLGFSLLMGFALGVFVSPVLFARSKADEPTINMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKAEYEKLDHATQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWD
Ga0073961_100250851	3300031063	Marine	MSAILGEPLTLGEEQIHRRSGKALLVLPLFIGFALGVFFSPMLNRSVVKEPAITAMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMRAQAREEFSKLDIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0073961_122475171	3300031063	Marine	SRTQSTFVLRRNSRLGRLTMSKPTALLDEPLSMGQEQIHRGSGKLFLVVPLLIGFVLAVFVSPALFTRSEVEDPAINMMASPMGMTCARVPAMSVGAMQNTLRKNGVPPSPMEKFALTSFVAVRDPSMKAQAKEEFSKLDMETQTKLKKLSKELVVRAARSSFSPEDMAGVSAPLGFWDPAGLA
Ga0138347_105944151	3300031113	Marine	MYKEFGEEDVQRGTFSSGKIVLASSLLIGFALGVFVSPVLFTRNDVEEPATNMMASPMSGMTCARVPAMSVAAMQNVWRKNGVPPSPMEKFALTSFVAVRNPSMKAQAKEEFSKLDASTQSKLKLLSKELVVRAARSSFDPEDMAGVSPPLGFWDPAGLASTNPAGFDSQEEKLAQYRRA
Ga0073958_100013501	3300031120	Marine	MSTNAVLGEPLTLGEEQIHRRGGKALLVLPLLVGFALGVFFSPVVLTRGEVQEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPALKAQAREEFSKLDDETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPAGFAKDEESVLQYRR
Ga0073958_100415751	3300031120	Marine	MDKLLGEEQTHRVPLYSGKTLLGGSLLIGFALGVFVSPVLFTRSEVEKPAMNMMASPMSMTCLRVPAISVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMKAQAKDEFEKLDYVTQTKLKQLSKDLVVRAAAFSPEDMAGVSAPLGFWDPAGFAKDEESVAQ
Ga0073958_115948761	3300031120	Marine	MSKPTALLDEPLSMGQEQIHRGSGKMFLLVPLLIGFVLAVFVSPVLFTSSDVEEPAINMMASPMSMTCARVPAMSVGAMQNTLRKNGVPPSPMEKFALTSFVAVRDPSMKAQAKEEFSKLDLETQTKLKKLSKELVVRAAKSSFSPEDMAGVSAPLGFWDPAGLASTNPAGFESQEAKLAQYRRAEIKHG
Ga0073958_115980121	3300031120	Marine	MYQELGQEQTHRGVKALLVLPLLIGFALGVFFSPVLLNRSEVKTPAINMLAGPSSMTCLRVPTLSVNALQSTLRKNGVPPSPMERFALTSFVATRDVSMKAQAKQEFSKLDPVTQSKFKTLAKDVVVKAETLKAEDMAGAIAPLGFWDPLGYSKVWDLAG
Ga0073958_116052611	3300031120	Marine	MPAEKCSGKALLFLSLLIGFVLGVFFSPAVLTRSEVQEPAITTMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRNPALKAQAREEFSKLDYETQAKLKALSKDLVVRATRSAFDPEDMAGVSAPLGFWDPAGFAKDE
Ga0138345_103996971	3300031121	Marine	MYKELGEEQIHRGSGKIVVALSLLMGFALGVFVSPALFTRREAGEPAINMMGSPMSMTCLRVPALSVNAMQNTLRKNGVPPSPMEKFALTSFAATRNPSMRAQAKEEFSKLDLVTQAKLKKLSKDLVVRAAAFDPEDMAGVSA
Ga0073962_100227651	3300031126	Marine	MSAILGEPLTLGEEQIHRRSGKALLVLPLFIGFALGVFFSPMLNRSVVKEPAITAMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMKAQAREEFSKLDIETQAKLKALSKDLVIRATRSSFSPEDMAGVSAPLGFWDPAGFAKDEESVAQ
Ga0073952_100292811	3300031445	Marine	MSAVLGEPLTLGEEQIHRRSGKALLVLPLLIGFALGVFFSPMLNRSEVKEPAITAMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMKAQAREEFSKLDIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWDPAGF
Ga0073954_100002841	3300031465	Marine	MSAILGEPLTLGEEQIHRRSGKALLVLPLFIGFALGVFFSPMLNRSVVKEPAITAMASPTSISCLRVPAMSVNAMQGVLRKNGVPSSPMEKFALTSFAATRDPSMKAQAREEFSKLDIETQAKLKALSKDLVVRATRSSFSPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0073954_100150151	3300031465	Marine	MSAVLGEPLTLGEEQIHRRSGKAFLVLPLLIGFALGVFFSPVLNHSEVKEPAITAMASPASISCLRVPAMSVNAMQGVLRKNGVAASPMEKFALTSFAATRDPSMKAQAREEFAKLPVETQAKLKALSKDLVVRAASFSPEDMAGVSAPLGFWDPAGFAKDEESVA
Ga0073954_100168771	3300031465	Marine	LALPLTIGFALGVFFSPVLLNRSEVETPAINTMGGPMTCLKVPTLSVNALQSTLRKNGVAPSPMERFALTSFVATRDVSMKAQAKQEFSKLDPVTQSKLKKLSKDLVVRAATFDLEDAPGVSAPLGFWDPAGFA
Ga0307383_105977401	3300031739	Marine	MAAETLSGKALLFFPLLIGFTLGVFFSPVLFARHEVETPAIDMRGASPMSVSCLRVPAISVNAMQNTLRKNGVPFSPMEKFALTSFAATRNPAMRAQAKEEFSKLDHVTQAKLKKLSKDLVVRAAAFDPEDMAGVSAPLGFWDPAGFAKDEESVAQYR
Ga0307383_106441491	3300031739	Marine	LVRIGLIQFPLLIGFGLGVFFSPVLFSRGEVEEPALNMMASPTGMTCLRAPTLSVNAMQNTLRKNGVPPSPMEKFALTSFAATRDVSMKAQAREEFSKLDPVTQGKLKKLSKDLVVRAAGFSLEDAPGVSAPLG
Ga0307382_105016301	3300031743	Marine	MSEYMNLGQEQIHRGTFSGGKALLALPLLVGFALGVFFSPVLLTRSEVETPAINMMGAPGMTCLRAPTLSVNALQSTLRKNGVPPSPMERFALTSFVATRDVSMKAQAKQEFSKLDPVTQSKLKKLSKDLVVRAATFDLEDAPGVSAPLGFWDPAGFAKD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metatranscriptome Family F093202

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences