NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F093463

Metagenome Family F093463

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093463
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 61 residues
Representative Sequence MNNVEPRGAVHWIDHYVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLW
Number of Associated Samples 97
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 90.57 %
% of genes from short scaffolds (< 2000 bps) 82.08 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.528 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(10.377 % of family members)
Environment Ontology (ENVO) Unclassified
(38.679 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(36.792 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.45%    β-sheet: 11.36%    Coil/Unstructured: 68.18%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF03358FMN_red 17.92
PF13417GST_N_3 8.49
PF00890FAD_binding_2 2.83
PF09084NMT1 1.89
PF00355Rieske 1.89
PF04909Amidohydro_2 1.89
PF02254TrkA_N 1.89
PF03401TctC 0.94
PF00106adh_short 0.94
PF13561adh_short_C2 0.94
PF13379NMT1_2 0.94
PF13276HTH_21 0.94
PF00903Glyoxalase 0.94
PF01738DLH 0.94
PF17203sCache_3_2 0.94
PF00270DEAD 0.94
PF10070DabA 0.94
PF04191PEMT 0.94
PF13714PEP_mutase 0.94
PF03486HI0933_like 0.94
PF02798GST_N 0.94
PF00528BPD_transp_1 0.94
PF03446NAD_binding_2 0.94
PF00296Bac_luciferase 0.94
PF03070TENA_THI-4 0.94
PF00999Na_H_Exchanger 0.94
PF07883Cupin_2 0.94
PF01977UbiD 0.94
PF04408HA2 0.94
PF13343SBP_bac_6 0.94
PF06240COXG 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0493NADPH-dependent glutamate synthase beta chain or related oxidoreductaseAmino acid transport and metabolism [E] 1.89
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.89
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.89
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.89
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.94
COG0029Aspartate oxidaseCoenzyme transport and metabolism [H] 0.94
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 0.94
COG0446NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductaseLipid transport and metabolism [I] 0.94
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.94
COG0492Thioredoxin reductasePosttranslational modification, protein turnover, chaperones [O] 0.94
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.94
COG1053Succinate dehydrogenase/fumarate reductase, flavoprotein subunitEnergy production and conversion [C] 0.94
COG1249Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductaseEnergy production and conversion [C] 0.94
COG1643HrpA-like RNA helicaseTranslation, ribosomal structure and biogenesis [J] 0.94
COG2072Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcDInorganic ion transport and metabolism [P] 0.94
COG2081Predicted flavoprotein YhiNGeneral function prediction only [R] 0.94
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.94
COG2509FAD-dependent dehydrogenaseGeneral function prediction only [R] 0.94
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.94
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.94
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.94
COG3427Carbon monoxide dehydrogenase subunit CoxGEnergy production and conversion [C] 0.94
COG3634Alkyl hydroperoxide reductase subunit AhpFDefense mechanisms [V] 0.94
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.94

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.53 %
UnclassifiedrootN/A25.47 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459014|G1P06HT02IMUBTAll Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium516Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101592118All Organisms → cellular organisms → Bacteria2539Open in IMG/M
3300000580|AF_2010_repII_A01DRAFT_1059172All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium586Open in IMG/M
3300000596|KanNP_Total_noBrdU_T14TCDRAFT_1023822All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium667Open in IMG/M
3300000858|JGI10213J12805_10372179All Organisms → cellular organisms → Bacteria1128Open in IMG/M
3300000890|JGI11643J12802_12251385All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1468Open in IMG/M
3300003997|Ga0055466_10118657Not Available734Open in IMG/M
3300003998|Ga0055472_10296214All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium519Open in IMG/M
3300004643|Ga0062591_100289787All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1280Open in IMG/M
3300005288|Ga0065714_10222073Not Available838Open in IMG/M
3300005295|Ga0065707_10915165All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium532Open in IMG/M
3300005340|Ga0070689_100654706Not Available914Open in IMG/M
3300005356|Ga0070674_101290543Not Available651Open in IMG/M
3300005445|Ga0070708_101056108All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium761Open in IMG/M
3300005561|Ga0066699_10724429All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300005713|Ga0066905_100330531All Organisms → cellular organisms → Bacteria → Proteobacteria1209Open in IMG/M
3300005713|Ga0066905_100334739All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300005713|Ga0066905_101132298All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium696Open in IMG/M
3300006844|Ga0075428_100388099All Organisms → cellular organisms → Bacteria → Proteobacteria1497Open in IMG/M
3300006852|Ga0075433_10164357All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1975Open in IMG/M
3300006871|Ga0075434_102085242All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium572Open in IMG/M
3300006903|Ga0075426_10219694All Organisms → cellular organisms → Bacteria → Proteobacteria1379Open in IMG/M
3300006969|Ga0075419_10681166All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium728Open in IMG/M
3300009156|Ga0111538_11694488All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium796Open in IMG/M
3300009176|Ga0105242_11570539All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300009177|Ga0105248_12978656All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium539Open in IMG/M
3300010046|Ga0126384_11215684All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium696Open in IMG/M
3300010362|Ga0126377_12097669All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium641Open in IMG/M
3300010366|Ga0126379_12860435All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium578Open in IMG/M
3300010396|Ga0134126_11522774All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium737Open in IMG/M
3300011444|Ga0137463_1323993Not Available559Open in IMG/M
3300011445|Ga0137427_10081068All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300012038|Ga0137431_1059415All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300012350|Ga0137372_10835188All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium659Open in IMG/M
3300012353|Ga0137367_10176077All Organisms → cellular organisms → Bacteria → Proteobacteria1555Open in IMG/M
3300012582|Ga0137358_10053111All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2703Open in IMG/M
3300012582|Ga0137358_10979687All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium549Open in IMG/M
3300012907|Ga0157283_10050049Not Available953Open in IMG/M
3300012922|Ga0137394_10201187All Organisms → cellular organisms → Bacteria1701Open in IMG/M
3300012986|Ga0164304_10358531Not Available1021Open in IMG/M
3300013100|Ga0157373_10226244All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1320Open in IMG/M
3300013104|Ga0157370_10537064Not Available1072Open in IMG/M
3300013308|Ga0157375_10649443Not Available1211Open in IMG/M
3300014304|Ga0075340_1064711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae669Open in IMG/M
3300014311|Ga0075322_1124476All Organisms → cellular organisms → Bacteria → Proteobacteria617Open in IMG/M
3300014326|Ga0157380_11713157All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium686Open in IMG/M
3300015241|Ga0137418_11125906All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium557Open in IMG/M
3300015371|Ga0132258_10553080All Organisms → cellular organisms → Bacteria2884Open in IMG/M
3300015371|Ga0132258_12581265Not Available1270Open in IMG/M
3300015372|Ga0132256_100585073Not Available1230Open in IMG/M
3300015374|Ga0132255_100772600All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300015374|Ga0132255_103597334Not Available659Open in IMG/M
3300017966|Ga0187776_10635748Not Available748Open in IMG/M
3300018028|Ga0184608_10046611All Organisms → cellular organisms → Bacteria1695Open in IMG/M
3300018072|Ga0184635_10223867All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium748Open in IMG/M
3300018075|Ga0184632_10044109All Organisms → cellular organisms → Bacteria1917Open in IMG/M
3300018422|Ga0190265_12203524All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium654Open in IMG/M
3300018429|Ga0190272_13118737All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium515Open in IMG/M
3300018920|Ga0190273_12368624All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium504Open in IMG/M
3300019885|Ga0193747_1009520All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2334Open in IMG/M
3300020004|Ga0193755_1011787All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2861Open in IMG/M
3300020186|Ga0163153_10384519Not Available605Open in IMG/M
3300025310|Ga0209172_10153396All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1258Open in IMG/M
3300025318|Ga0209519_10233974All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1077Open in IMG/M
3300025324|Ga0209640_10274195All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300025899|Ga0207642_10327043All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium897Open in IMG/M
3300025915|Ga0207693_11310181All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium541Open in IMG/M
3300025916|Ga0207663_10575075Not Available883Open in IMG/M
3300025917|Ga0207660_11671330All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium512Open in IMG/M
3300026037|Ga0208655_1003214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium1205Open in IMG/M
3300026088|Ga0207641_10608231Not Available1071Open in IMG/M
3300026088|Ga0207641_12225593All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium548Open in IMG/M
3300026090|Ga0208912_1046608All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium641Open in IMG/M
3300027527|Ga0209684_1004142All Organisms → cellular organisms → Bacteria → Proteobacteria2459Open in IMG/M
3300027691|Ga0209485_1059372Not Available1002Open in IMG/M
3300027722|Ga0209819_10350232All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium505Open in IMG/M
3300027831|Ga0209797_10037235All Organisms → cellular organisms → Bacteria2195Open in IMG/M
(restricted) 3300027872|Ga0255058_10388022All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium677Open in IMG/M
3300027874|Ga0209465_10682032All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium505Open in IMG/M
3300027875|Ga0209283_10808867All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium576Open in IMG/M
3300028807|Ga0307305_10520185All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium532Open in IMG/M
3300030620|Ga0302046_10049109All Organisms → cellular organisms → Bacteria → Proteobacteria3431Open in IMG/M
3300031228|Ga0299914_10258734All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1539Open in IMG/M
3300031228|Ga0299914_10955723All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium703Open in IMG/M
3300031474|Ga0170818_109180285All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium698Open in IMG/M
3300031548|Ga0307408_100093887All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2271Open in IMG/M
3300031720|Ga0307469_10741836All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium895Open in IMG/M
3300031720|Ga0307469_12215977All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium535Open in IMG/M
3300031740|Ga0307468_100023054All Organisms → cellular organisms → Bacteria2799Open in IMG/M
3300031903|Ga0307407_10141040All Organisms → cellular organisms → Bacteria1555Open in IMG/M
3300031908|Ga0310900_10876698All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae731Open in IMG/M
3300032126|Ga0307415_101006305All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium775Open in IMG/M
3300032144|Ga0315910_10810974All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium728Open in IMG/M
3300032829|Ga0335070_10394316All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1325Open in IMG/M
3300033412|Ga0310810_10650670Not Available996Open in IMG/M
3300033513|Ga0316628_100577351All Organisms → cellular organisms → Bacteria1462Open in IMG/M
3300034151|Ga0364935_0108297All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium858Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.38%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.60%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.66%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.72%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.77%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.77%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands3.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.77%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.83%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.83%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.89%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.94%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.94%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume0.94%
SeawaterEnvironmental → Aquatic → Marine → Gulf → Unclassified → Seawater0.94%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.94%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.94%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.94%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.94%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459014Litter degradation PV2EngineeredOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300000596Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TCEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300001845Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Sites - lt1kbEnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005288Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012038Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2EnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014304Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020186Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1EnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026037Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026090Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026144Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_D2_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027527Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027831Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027872 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_9EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
2PV_005768502170459014Switchgrass, Maize And Mischanthus LitterMINNLEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWEGGSCRIG
INPhiseqgaiiFebDRAFT_10159211813300000364SoilMNDVEPRGAVHWIDHYVVGTXDMGAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWDGGSCRIG
AF_2010_repII_A01DRAFT_105917213300000580Forest SoilMSNIEPKGAVHWIDHFVVGTNDMVAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWEGGSCRI
KanNP_Total_noBrdU_T14TCDRAFT_102382223300000596SoilMADVEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWDG
JGI10213J12805_1037217913300000858SoilMNNVELKGAAHWIDHFVVGTNDMVAWTDWAVNGIGLTRRPIRGLTTAARKKNMKVICFLWWEGGSCRIG
JGI11643J12802_1225138543300000890SoilMNSNEPKGAAHWIDHFVVGTNDMVAWADWAVNGIGLTRRPFTGLTTAARKNNIKIICFLWWDGGS
shallow_106999823300001845Hydrothermal Vent PlumeMALEQRSGAVHWIDHVVVGTNDMSAWVQWAVNAIGVIPGPVRGLTTAARQRN
Ga0055466_1011865713300003997Natural And Restored WetlandsMNNIEPKGAVHWIDHYVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNI
Ga0055472_1029621413300003998Natural And Restored WetlandsMNSNEPKGAAHWIDHFVVGTNDMVAWADWAVNGIGLTRRPFTGLTTAARKNNIKIIC
Ga0055472_1031545223300003998Natural And Restored WetlandsMTTVEPRGAVHWIDHYVVGTNDMVAWADWAVNATGIQRQPLIGLTTAARKR
Ga0062591_10028978713300004643SoilMDNVEPKGAAHWIDHFVVGTNDMVAWTDWAVNGIGLIRRPIRGLTTEARKKNIKIICFLWWE
Ga0065714_1022207323300005288Miscanthus RhizosphereMIQDVEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWEGGSCRI
Ga0065707_1091516513300005295Switchgrass RhizosphereMANVEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWDGGSCRI
Ga0070689_10065470623300005340Switchgrass RhizosphereMNNVEPKGAVHWIDHFVVGTNDMGAWVDWAVSATGITRRPIIGLTTAARKRNIKITSF
Ga0070674_10129054323300005356Miscanthus RhizosphereMINNLEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRKIKITSF
Ga0070688_10110754523300005365Switchgrass RhizosphereMNNVEPKGAVHWIDHFVVGTNDMGAWVDWAVSATGITRRPIIGLTTAARKRN
Ga0070708_10105610823300005445Corn, Switchgrass And Miscanthus RhizosphereMADVEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWDGGSCRIG
Ga0066699_1072442923300005561SoilMANDEPRGAVHWIDHYVVGTNDMVAWADWAVNATGITRRPIVGITTAARKKNVPIMCF
Ga0066905_10033053113300005713Tropical Forest SoilMSNIEPKGAVHWIDHYVVGTNDMVAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWEGGSCRIGA
Ga0066905_10033473923300005713Tropical Forest SoilMNNVEPKGAVHWIDHYVVGTNDMNAWADWAVNATGITRRPIIGLTTSARKRNIKIT
Ga0066905_10113229833300005713Tropical Forest SoilMSNIEPKGAVHWIDHYVVGTNDMVAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWEGGSC
Ga0075428_10038809913300006844Populus RhizosphereMNHLEPRRAVHWIDHFVVGTNDMVAWADWAVNATGLTRRPLIGLTTQARKRNIKIT
Ga0075433_1016435733300006852Populus RhizosphereMINDVEPKGAVHWIDHFVVGTNDMVAWVDWAVNATGIARRPIIGLTTAARKRNIKITSFLWWEGGSCRI
Ga0075434_10208524223300006871Populus RhizosphereMNDVEPRGAVHWIDHYVVGTNDMGAWVDWAVNATGITWRPIIGLTTAARKRNIKITSFLW
Ga0075426_1021969413300006903Populus RhizosphereMIQDVEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFL
Ga0075419_1068116613300006969Populus RhizosphereMTDVEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWDGGSCRIG
Ga0105106_1075351423300009078Freshwater SedimentMTKLEPRGAVHWIDHFVVGTNNMSAWVEWAVNSTGITRQPIIGLTTAAR
Ga0111538_1169448833300009156Populus RhizosphereMNDVEPRGAVHWIDHYVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWDGGSCRIG
Ga0105242_1157053923300009176Miscanthus RhizosphereMNPAEPRGAAHWIDHFVVGTNDMGAWVDWAVSATGITRRPIIGLTTSARKRNIKITSFLW
Ga0105248_1297865623300009177Switchgrass RhizosphereMNPVEPKGAAHWIDHFVVGTNDMGAWVDWAVNATGITRRPIIGLTTSARKRNIKITSFLWWEGGSCR
Ga0126384_1121568413300010046Tropical Forest SoilMSNIEPKGAVHWIDHFVVGTNDMVAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWEGGSC
Ga0126377_1209766913300010362Tropical Forest SoilMSNIEPKGAVHWIDHYVVGTNDMVAWADWAVNATGITRRLLIGLTTAARKRNIKITCF
Ga0126379_1286043513300010366Tropical Forest SoilMANVEPKGAVHWIDHFVVGTNDMVAWADWAVNATGITRRPLIGLTTAARKRNIK
Ga0134126_1152277423300010396Terrestrial SoilMTNIEPKGAVHWIDHFVVGTNDMAAWADWAVNAIGLTPRPLIGLTTAARKRNIKITSFLWWDGGSC
Ga0137463_132399323300011444SoilMNNVEPKGAVHWIDHFVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWD
Ga0137427_1008106833300011445SoilMNNVEPKGAVHWIDHFVVGTNNMGAWVDWAVNATGITRQPIIGLTTAARKRN
Ga0137431_105941513300012038SoilMTTVEPRGAVHWIDHYVVGTNDMVAWADWAVNATGIQRQPLIGLTTAARKRNVKITCFL
Ga0137372_1083518813300012350Vadose Zone SoilMADVEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWDGGSCRIGA
Ga0137367_1017607713300012353Vadose Zone SoilMNTLEPKGAVHWIDHFVVGTNDMVAWADWAVNATGLTRRPLIGLTTQARKRNIKITCFLWWEGGSCR
Ga0137358_1005311133300012582Vadose Zone SoilMNDVEPRGAVHWIDHFVVGTNDMPAWVDWAVNAIGLTRRPLIGLTTAARKRNIKITSFLWWEGGSCRIGAF
Ga0137358_1097968713300012582Vadose Zone SoilVNNVGPKGAVHWIDHFVVGTNDMVAWADWAVNAIGLTRRPLIGLTTAARKRNIKITCFL
Ga0157283_1005004913300012907SoilMINNLESKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWEGGSCRIGA
Ga0137394_1020118713300012922Vadose Zone SoilMNDVEPRGAVHWIDHYVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWDGGSCRI
Ga0164304_1035853113300012986SoilMIQDVEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIK
Ga0157373_1022624413300013100Corn RhizosphereMANDEPRGAVHWIDHHVVGTNDMIAWAEWAVNAIGLKRQPINGMTTAARKKNVPIMCF
Ga0157370_1053706433300013104Corn RhizosphereMINNLEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRKIKITSFLWWEGGSCR
Ga0157375_1064944333300013308Miscanthus RhizosphereMNNVEPKGAVHWIDHFVVGTNDMGAWVDWAVSATGSTRRPIIGRTTAARKRNIKITSFLWWE
Ga0075340_106471123300014304Natural And Restored WetlandsMIKIEPRGAVHWIDHFVVGTNNMSAWVDWAVNSTGITRQPIIGLTTAARKRNIKITSF
Ga0075322_112447613300014311Natural And Restored WetlandsMNNPEPKGAVHWIDHFVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWEGGSCRI
Ga0157380_1171315723300014326Switchgrass RhizosphereMNDVEPRGAVHWIDHYVVGTNDMGAWVDWAVSATGIAPRPIIGLPTAARKRNIKITNFLWWERG
Ga0137418_1112590623300015241Vadose Zone SoilMNDVEPRGAVHWIDHYVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNI
Ga0132258_1055308053300015371Arabidopsis RhizosphereMNDVEPRGAVHWIDHYVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWD
Ga0132258_1258126513300015371Arabidopsis RhizosphereMIQDVEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKIT
Ga0132256_10058507323300015372Arabidopsis RhizosphereMIQDVEPEGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKIT
Ga0132255_10077260033300015374Arabidopsis RhizosphereMADIEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIK
Ga0132255_10359733423300015374Arabidopsis RhizosphereMSEIEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLW
Ga0187776_1063574823300017966Tropical PeatlandMNDVEPKGVVHWIDHYVVGTNDMGAWVDWAVNATGIVRQPIIGLTTAARKRNIKITSFLWWEGG
Ga0184608_1004661113300018028Groundwater SedimentMATVEPRGAVHWIDHFVVGTNDMGSWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLW
Ga0184635_1022386713300018072Groundwater SedimentMSDVEPRGAVHWIDHFVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWEGGSCRIG
Ga0184632_1004410913300018075Groundwater SedimentMSDVEPRGAVHWIDHFVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLW
Ga0184633_1017276433300018077Groundwater SedimentMSNIEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKR
Ga0190265_1220352413300018422SoilMDNVEPKGAAHWIDHFVVGTNDMVAWTDWAVNGIGLARRPIRGLTTAARQKNIKIICFLWWE
Ga0190272_1311873713300018429SoilMNNVEPKGAAHWIDHFVVGTNDMVAWADWAVNGIGLTRRPFTGLTTAARKKNIKIICFLWWEGGSCRIGAF
Ga0190273_1236862423300018920SoilMNDIEPKGAVHWIDHFVVGTNDMGAWVDWAVNATGITRQPIIGLTTAARKRNIKITSFLWWDGG
Ga0193747_100952013300019885SoilMNDVEPRGAVHWIDHFVVGTNDMPAWVDWAVNAIGLTRRPLIGLTTAARKRNIKITSFLW
Ga0193755_101178733300020004SoilMNDVEPRGAVHWIDHFVVGTNDMPAWVDWAVNAIGLTRRPLIGLTTAARKRNIKITSFLWWEGGSC
Ga0163153_1038451913300020186Freshwater Microbial MatMNIVEPRGAVHWIDHFVVGTNNMSAWVDWAVNSTGITRQPIIGLTTAARKRNIKI
Ga0209172_1015339623300025310Hot Spring SedimentMFGDEPRGAVHWIDHHVVGTNDIVAWSDWAVNATGLPRRPIIGVTTAARKKNTPIMCFLWWEGG
Ga0209519_1023397413300025318SoilMNNDEPKGAAHWIDHFVVGTNDMVAWADWAVNGIGLTRRPFTGLTTAARKKNIKIICFLW
Ga0209640_1027419533300025324SoilMNNPEPKGAVHWIDHFVVGTNNMGAWVDWAVNATGITRQPIIGLTTAARKRNIKITSFLW
Ga0207642_1032704323300025899Miscanthus RhizosphereMNPAEPKGAAHWIDHFVVGTNDMGAWVDWAVSATGITRRPIIGLTTSARKRNIKITSFL
Ga0207693_1131018123300025915Corn, Switchgrass And Miscanthus RhizosphereMADVEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLW
Ga0207663_1057507513300025916Corn, Switchgrass And Miscanthus RhizosphereMADVEPRGAVHWIDHYVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLW
Ga0207660_1167133013300025917Corn RhizosphereMIQDVEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWEGGSCRIGA
Ga0208655_100321423300026037Natural And Restored WetlandsMSQVEPRGAVHWIDHYVVGTNDMVAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWEG
Ga0207641_1060823123300026088Switchgrass RhizosphereMIQDVEPEGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWE
Ga0207641_1222559323300026088Switchgrass RhizosphereMNPVEPKGAAHWIDHFVVGTNDMGAWVDWAVSATGITRRPIIGLTTSARKRNIKITSFLWWAGGSCR
Ga0208912_104660823300026090Natural And Restored WetlandsMHDVEPKGAAHWIDHFVVGTNDMVAWADWAVNGIGLTRRPFTGLTTAARKKNIKIICFLWWQG
Ga0209954_111441613300026144SoilVGTEEPRGAVHWIDHFVVGTNDMVAWSNWGVNAIGLDRQPIVGLTTAQRK
Ga0209684_100414233300027527Tropical Forest SoilMSNIEPKGAVHWIDHYVVGTNDMSAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLW
Ga0209485_105937213300027691Agricultural SoilMNTVEPKGAAHWIDHFVVGTNDMVAWADWAVNGIGLTRRPFTGLTTAARKKN
Ga0209819_1035023213300027722Freshwater SedimentMENVEPKGAVHWIDHYVVGTNDMVAWADWAVNATGITRRPLIGLTTAARKRNIKITCFL
Ga0209797_1003723513300027831Wetland SedimentMNTEPKGAVHWIDHFVVGTNNMSAWVDWAVDSTGITRQPIIGLTTAARKRNIKITSFLWWQGGS
(restricted) Ga0255058_1038802213300027872SeawaterMANDEPRGAVHWIDHRVVGTNDLVKWVDWAVKATGAIPWPMIGITTAERKRNAPINCFLDFAKGHRQF
Ga0209465_1068203213300027874Tropical Forest SoilMSNIEPKGAVHWIDHYVVGTNDMVAWADWAVNATGIMRRPLIGLTTAARKRNIKITCFLWWEG
Ga0209283_1080886723300027875Vadose Zone SoilMAQDEPRGAVHWIDHYVVGTNDMVAWADWAVNATGIPRRPIVGITTAARKKNVPIMCFLW
Ga0307305_1052018523300028807SoilMNDVEPRGAVHWIDHFVVGTNDMPAWVDWAVNAIGLTRRPLIGLTTAARKRNI
Ga0302046_1004910913300030620SoilMNNDEPKGAAHWIDHFVVGTNDMVAWADWAVNGIGLTRRPFTGLTTAARKKNIKIICF
Ga0299914_1025873443300031228SoilMNNVEPRGAVHWIDHYVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWWEG
Ga0299914_1095572313300031228SoilMNNVEPKGAAHWIDHYVVGTNDMVAWVDWAVNAIGLTRKPITGLTTAARKINRKIICFLWWPGGSCRIG
Ga0170818_10918028523300031474Forest SoilMADVEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITC
Ga0307408_10009388723300031548RhizosphereMDNVEPKGAAHWIDHFVVGTNDMVAWTDWAMNGIGLTRRPMRGLTTAARKKNMKIICFLW
Ga0307469_1074183613300031720Hardwood Forest SoilMNDVEPRGAVHWIDHFVVGTNDMPAWVDWAVNAIGLTRRPLIGLTTAARKRNIKI
Ga0307469_1221597723300031720Hardwood Forest SoilMSDVEPRGAVHWIDHYVVGTNDMVAWADWAVNATGITRRPLIGLTTAARKRNIKITC
Ga0307468_10002305413300031740Hardwood Forest SoilMADVEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWDGGSCR
Ga0307407_1014104023300031903RhizosphereMDNVEPKGAAHWIDHFVVGTNDMVAWTDWAVNGIGLTRRPMRGLTTAARKKNMKII
Ga0310900_1087669813300031908SoilMIQDIEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITS
Ga0306922_1114779623300032001SoilMLDVEPKGAVHWIDHYVVGTNDMVAWADWAVNATGITRRPLIGLTTAARKR
Ga0307415_10100630513300032126RhizosphereMDNVEPKGAAHWIDHFVVGTNDMVAWTDWAVNGIGLTRRPIRGLTTAAQNKKIKIICFLWWEGGSCRIG
Ga0315910_1081097413300032144SoilMNTIEPKGAAHWIDHFVVGTNDMVAWADWAVNGIGLTRRPFTGLTTAARKKNIKIICFLWWEGG
Ga0307470_1061054323300032174Hardwood Forest SoilMADVEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRN
Ga0335070_1039431613300032829SoilMEDLEPRGAVYWIDHYVVGTNDMVAWADWAVNAIGLTRRPLIGLTTEARKRNVKITCFLWWQGGSCRIG
Ga0310810_1065067013300033412SoilMIQDVEPKGAVHWIDHYVVGTNDMVAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLWW
Ga0316628_10057735113300033513SoilMNNVEPRGAVHWIDHYVVGTNDMGAWVDWAVNATGITRRPIIGLTTAARKRNIKITSFLW
Ga0364935_0108297_659_8563300034151SedimentMSGVEPRGAVHWIDHFVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKRNIKITCFLWWEGGSC
Ga0373950_0015408_2_1543300034818Rhizosphere SoilMADIEPKGAVHWIDHYVVGTNDMGAWADWAVNATGITRRPLIGLTTAARKR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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