Metagenome / Metatranscriptome Family F093479

Basic Information
Family ID	F093479
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	84 residues
Representative Sequence	MPAEAVAPARAYKMTLRVSAVEEAATLAQELELRGALVERNGEVVTTVWRASPADHPQMWDEREFPELRFFLRAWAGLNAARQLVVLEERPIAC
Number of Associated Samples	72
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.38 %
% of genes near scaffold ends (potentially truncated)	34.91 %
% of genes from short scaffolds (< 2000 bps)	81.13 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (52.830 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (18.868 % of family members)
Environment Ontology (ENVO)	Unclassified (55.660 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (74.528 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 10.64% Coil/Unstructured: 39.36%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00990	GGDEF	21.70
PF02518	HATPase_c	5.66
PF00196	GerE	2.83
PF05544	Pro_racemase	0.94
PF01966	HD	0.94
PF07730	HisKA_3	0.94
PF12704	MacB_PCD	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.94
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.94
COG3938	Proline racemase/hydroxyproline epimerase	Amino acid transport and metabolism [E]	0.94
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.94
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
All Organisms	root	All Organisms	47.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
cellular organisms	root	All Organisms → cellular organisms	47.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_101395	Not Available	843	Open in IMG/M
3300001538\|A10PFW1_10693118	Not Available	805	Open in IMG/M
3300003321\|soilH1_10250774	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300003323\|rootH1_10138799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2140	Open in IMG/M
3300003324\|soilH2_10008792	All Organisms → cellular organisms → Bacteria	4531	Open in IMG/M
3300003992\|Ga0055470_10150292	Not Available	611	Open in IMG/M
3300004479\|Ga0062595_101963669	Not Available	563	Open in IMG/M
3300005327\|Ga0070658_10123706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2151	Open in IMG/M
3300005327\|Ga0070658_10504092	Not Available	1046	Open in IMG/M
3300005327\|Ga0070658_11527989	Not Available	579	Open in IMG/M
3300005329\|Ga0070683_100188533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1958	Open in IMG/M
3300005329\|Ga0070683_100245296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1704	Open in IMG/M
3300005329\|Ga0070683_101392240	Not Available	674	Open in IMG/M
3300005336\|Ga0070680_100111643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2276	Open in IMG/M
3300005336\|Ga0070680_100177023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1796	Open in IMG/M
3300005336\|Ga0070680_100373908	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300005337\|Ga0070682_100096747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1942	Open in IMG/M
3300005339\|Ga0070660_100003549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10763	Open in IMG/M
3300005339\|Ga0070660_100193414	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300005339\|Ga0070660_100217051	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300005339\|Ga0070660_100910510	Not Available	742	Open in IMG/M
3300005366\|Ga0070659_100026373	All Organisms → cellular organisms → Bacteria	4471	Open in IMG/M
3300005366\|Ga0070659_100134764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2008	Open in IMG/M
3300005434\|Ga0070709_10173080	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300005435\|Ga0070714_100318649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1453	Open in IMG/M
3300005455\|Ga0070663_100150032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1787	Open in IMG/M
3300005455\|Ga0070663_100358302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1183	Open in IMG/M
3300005530\|Ga0070679_100565301	Not Available	1081	Open in IMG/M
3300005535\|Ga0070684_102127062	Not Available	530	Open in IMG/M
3300005539\|Ga0068853_100202446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1807	Open in IMG/M
3300005563\|Ga0068855_100244827	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300005563\|Ga0068855_101837088	Not Available	615	Open in IMG/M
3300005577\|Ga0068857_101348680	Not Available	693	Open in IMG/M
3300005614\|Ga0068856_101703509	Not Available	643	Open in IMG/M
3300005764\|Ga0066903_106090474	Not Available	631	Open in IMG/M
3300006806\|Ga0079220_10310957	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300006806\|Ga0079220_10656984	Not Available	759	Open in IMG/M
3300009093\|Ga0105240_11019917	Not Available	884	Open in IMG/M
3300009093\|Ga0105240_11026562	Not Available	881	Open in IMG/M
3300009098\|Ga0105245_11510529	Not Available	723	Open in IMG/M
3300009174\|Ga0105241_10907715	Not Available	818	Open in IMG/M
3300009545\|Ga0105237_11955558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	595	Open in IMG/M
3300009551\|Ga0105238_12326428	Not Available	571	Open in IMG/M
3300010371\|Ga0134125_11861863	Not Available	654	Open in IMG/M
3300010373\|Ga0134128_11082212	Not Available	885	Open in IMG/M
3300010375\|Ga0105239_11329827	Not Available	829	Open in IMG/M
3300010375\|Ga0105239_12317602	Not Available	625	Open in IMG/M
3300010399\|Ga0134127_10636688	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300010399\|Ga0134127_11561571	Not Available	734	Open in IMG/M
3300012014\|Ga0120159_1041574	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300012019\|Ga0120139_1098702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300012955\|Ga0164298_10481031	Not Available	825	Open in IMG/M
3300012960\|Ga0164301_10238005	Not Available	1187	Open in IMG/M
3300012986\|Ga0164304_11811639	Not Available	511	Open in IMG/M
3300013102\|Ga0157371_11426815	Not Available	538	Open in IMG/M
3300013104\|Ga0157370_10021373	All Organisms → cellular organisms → Bacteria	6448	Open in IMG/M
3300013104\|Ga0157370_10191659	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300013104\|Ga0157370_11249698	Not Available	670	Open in IMG/M
3300013104\|Ga0157370_11969482	Not Available	524	Open in IMG/M
3300013105\|Ga0157369_10016096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8415	Open in IMG/M
3300013296\|Ga0157374_11118391	Not Available	808	Open in IMG/M
3300013296\|Ga0157374_11672979	Not Available	661	Open in IMG/M
3300013307\|Ga0157372_10122996	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300013772\|Ga0120158_10032734	All Organisms → cellular organisms → Bacteria	3931	Open in IMG/M
3300014054\|Ga0120135_1031266	Not Available	733	Open in IMG/M
3300014058\|Ga0120149_1080356	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300014497\|Ga0182008_10315341	Not Available	821	Open in IMG/M
3300015371\|Ga0132258_12392724	Not Available	1323	Open in IMG/M
3300018482\|Ga0066669_12147480	Not Available	528	Open in IMG/M
3300020069\|Ga0197907_10537589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2710	Open in IMG/M
3300020070\|Ga0206356_10971254	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300020082\|Ga0206353_10591692	Not Available	731	Open in IMG/M
3300020082\|Ga0206353_11129341	Not Available	826	Open in IMG/M
3300022467\|Ga0224712_10507337	Not Available	583	Open in IMG/M
3300022467\|Ga0224712_10533141	Not Available	569	Open in IMG/M
3300025909\|Ga0207705_10137476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1822	Open in IMG/M
3300025909\|Ga0207705_10232801	Not Available	1402	Open in IMG/M
3300025912\|Ga0207707_10006145	All Organisms → cellular organisms → Bacteria	10495	Open in IMG/M
3300025912\|Ga0207707_10337770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1299	Open in IMG/M
3300025913\|Ga0207695_10325464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1426	Open in IMG/M
3300025917\|Ga0207660_10220934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1487	Open in IMG/M
3300025917\|Ga0207660_11014219	Not Available	677	Open in IMG/M
3300025917\|Ga0207660_11076755	Not Available	655	Open in IMG/M
3300025919\|Ga0207657_10010938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9026	Open in IMG/M
3300025919\|Ga0207657_10026550	All Organisms → cellular organisms → Bacteria	5318	Open in IMG/M
3300025919\|Ga0207657_10244846	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300025920\|Ga0207649_10028217	All Organisms → cellular organisms → Bacteria	3303	Open in IMG/M
3300025921\|Ga0207652_10074600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2954	Open in IMG/M
3300025921\|Ga0207652_11173527	Not Available	669	Open in IMG/M
3300025924\|Ga0207694_10479650	Not Available	1040	Open in IMG/M
3300025929\|Ga0207664_10208575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1689	Open in IMG/M
3300025932\|Ga0207690_10981219	Not Available	702	Open in IMG/M
3300025944\|Ga0207661_10422670	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300025945\|Ga0207679_12029398	Not Available	523	Open in IMG/M
3300025949\|Ga0207667_10242342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1845	Open in IMG/M
3300025949\|Ga0207667_10759427	Not Available	968	Open in IMG/M
3300026041\|Ga0207639_10309117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300026041\|Ga0207639_10434782	Not Available	1189	Open in IMG/M
3300026067\|Ga0207678_10288615	Not Available	1409	Open in IMG/M
3300026078\|Ga0207702_10347739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1418	Open in IMG/M
3300026078\|Ga0207702_10842924	Not Available	907	Open in IMG/M
3300026078\|Ga0207702_11845150	Not Available	596	Open in IMG/M
3300031938\|Ga0308175_100059697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3344	Open in IMG/M
3300031996\|Ga0308176_11282945	Not Available	778	Open in IMG/M
3300031996\|Ga0308176_12392427	Not Available	563	Open in IMG/M
3300033475\|Ga0310811_11411074	Not Available	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.94%
Environmental	Environmental	49.06%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.94%
Terrestrial	Environmental → Terrestrial	48.11%
Aquatic	Environmental → Aquatic	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.26%
Marine	Environmental → Aquatic → Marine	0.94%
Rhizome	Host-Associated → Plants → Rhizome	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.30%
Loam	Environmental → Terrestrial → Soil → Loam	19.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.32%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.32%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	18.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	16.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	11.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	8.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	5.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_01784990	2199352024	Soil	MPAEAVATTRAYKMIIRVSSPSEAATLAQELETLGALVEREGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARRLVLLDERPIAC
A10PFW1_106931182	3300001538	Permafrost	VAPVRAYLMTLRVSAIDEAASLARELELRGASVERDGEVVTSVWRVSDADHPHLWDERDFPELRFFLRAWAGAKAARQLVVLDERPIAC*
soilH1_102507743	3300003321	Sugarcane Root And Bulk Soil	MPAEAVASARAFTMTIRVSSVEEAATLAQELELRGAHVDRDGGVVTSVWCASDADHPDLWDEREFPELRFFLRAWAGANAGRQLVVLDERPVAC*
rootH1_101387991	3300003323	Sugarcane Root And Bulk Soil	MPAEAVASARAFTMTIRVSSVEEAATLAQELALRGAHVDREGGVVTSVWCASDADHPDLWDEREFPELRFFLRAWAGANAGRQLVVLDERPVAC*
soilH2_100087921	3300003324	Sugarcane Root And Bulk Soil	AYKMTLRVSAVEEAATLAEELEIRGALVERNGEVVTTVWRASAADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0055470_101502921	3300003992	Natural And Restored Wetlands	MPAEAVATARAYKMTLRVSAAAEAATLAQELEVLGALVERNGEVVTTVWRASEADHPHMWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0062595_1019636692	3300004479	Soil	EAVVPTRAYKMTLRVSAVEEAAALAHELEARGAHVERDGEVVSSVWHASEADHPQLWDEREFTELRFFLRAWAGANAARQLVVLEERPIAC*
Ga0070658_101237063	3300005327	Corn Rhizosphere	MLAQELELRGALVERNGEVVTAVWRASEADHPHLWDELEFPELRFFLRAWAGDDAARQLVVLDERPIAS*
Ga0070658_105040922	3300005327	Corn Rhizosphere	MPAEAAAPPRAYKMTLRVSAADEAATLAQELELRGALVERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAGVAAARQLVVLEERPIAC*
Ga0070658_115279892	3300005327	Corn Rhizosphere	ELETLGALVERHGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0070683_1001885333	3300005329	Corn Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAHELETLGALVERHGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0070683_1002452961	3300005329	Corn Rhizosphere	MLAQELELRGALVERNGEVVTTIWRASEADHPHMWDEHEFPELRFFLRAWAGDIAGRQLVVLDERPIAS*
Ga0070683_1013922402	3300005329	Corn Rhizosphere	MPADTVALARAYKMTLRVSAVEEAAVLAEALESRGALVERDGEVVTAVWQASEADHPQLWEEREFPELRFFLRAWAGVNAARQLVVLEERPIAC*
Ga0070680_1001116432	3300005336	Corn Rhizosphere	MPAEVAAPARAYKMTLRVSAVEEAATLAQELELRGALVERNGEVVTTVWRASAADHPQMWDEREFPELRFFLRAWAGVKAARQLVVLDERPIAC*
Ga0070680_1001770231	3300005336	Corn Rhizosphere	QELELRGALVERNGDVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDDAARQLVVLDERPIAS*
Ga0070680_1003739082	3300005336	Corn Rhizosphere	MLAQELEIRGALVERNGEVVTTVWRASAADHPQQWDEREFPELRFFLRAWAGANAARQLVVLDERPVAC*
Ga0070682_1000967472	3300005337	Corn Rhizosphere	MTLRVSAVDEAAMLAQELELRGALVERNGEVVTTIWRASEADHPHMWDEHEFPELRFFLRAWAGDIAGRQLVVLDERPIAS*
Ga0070660_1000035495	3300005339	Corn Rhizosphere	MPAEVVAPARAYKMTLRVSAVEEAATLAQELELRGALVERNGEVVTTVWRASAADHPQMWDEREFPELRFFLRAWAGVKAARQLVVLDERPIAC*
Ga0070660_1001934141	3300005339	Corn Rhizosphere	MTVRVSAVEEAATLAQELELRGALVERNGEVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS*
Ga0070660_1002170512	3300005339	Corn Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAQELETLGALVERNGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0070660_1009105101	3300005339	Corn Rhizosphere	MPADTVALARAYKMTLRVSAVEEAAALAEALESRGALVERDGEVVTAVWQASEADHPQLWEEREFPELRFFLRAWAGVNAARQLVVLEERPIAC*
Ga0070659_1000263734	3300005366	Corn Rhizosphere	MLAQELELRGALVERNGDVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS*
Ga0070659_1001347641	3300005366	Corn Rhizosphere	TTVWRASAADHPQMWDEREFPELRFFLRAWAGVKAARQLVVLDERPIAC*
Ga0070709_101730802	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPADALATARAYKMTLRVSAVEEAETLARELESRGALVEQDGEVVTTVWRASEADHPESWDEREFPELRFFLRSWAGDKAARQLVVLDERPLAC*
Ga0070714_1003186491	3300005435	Agricultural Soil	MPAEALATARAYTMTLRVSAVEEAETLAHELESRGALVEQDGEVVTTVWRASEADHPESWDEREFPELRFFLRSWAGDKAARQLVVLDERPLAC*
Ga0070663_1001500321	3300005455	Corn Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAQELETLGALVERNGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGGNAARQLVVLDERPIAC*
Ga0070663_1003583022	3300005455	Corn Rhizosphere	MTIRVSAAEEAAMLAQELEIRGALVERNGEVVTTVWRASEADHPHMWDEREFPELRFVLRAGAGDIAGRQLIVLDERPILS*
Ga0070679_1005653012	3300005530	Corn Rhizosphere	MPAEAAAPPRAYKMTLRVSAADEAATLAQELELRGALVERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAG
Ga0070684_1021270622	3300005535	Corn Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAQELETLGALVERNGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAG
Ga0068853_1002024462	3300005539	Corn Rhizosphere	MPADTVALARAYKMTLRVSAVEEAAALAEALESRGALVERDGEVVTAVWHASEADHPQLWDEREFPELRFFLRAWAGVNAARQLVVLEERPIAC*
Ga0068855_1002448273	3300005563	Corn Rhizosphere	MPADTVALARAYKMTLRVSAVEEAAALAEALESRGALVERDGEVVTAVWHASEADHPQLCDEREFPELRFFLRAWAGVNAARQLVVLEERPIAC*
Ga0068855_1018370882	3300005563	Corn Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAHELETLGALVERHGAVVTTVWRASPTDHPQLWDEREFPELRFFLRAWAGA
Ga0068857_1013486802	3300005577	Corn Rhizosphere	MPAKAVAAARAYKMTLRVSAADEAATLAQELELRGALVERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAGVAAARQLVVLEERP
Ga0068856_1017035091	3300005614	Corn Rhizosphere	MPAEAVVGARAYKMTLRVSAVEEAETLARELELRGALVEQDGEVVTTVWRASEADHPESWDEREFPELRFFLRAWAGGNAARQLVVLDERPLAC*
Ga0066903_1060904742	3300005764	Tropical Forest Soil	MAPAEAVAARGAYLVRLQVPAVGEAATLAEALEERGACVERNGEIVTTVWPASEADDVGKWDEFFFPELVFFLRAWAGGRAERQLTVLEERPLPV*
Ga0079220_103109571	3300006806	Agricultural Soil	MPAEAVAPARAYKMTLRVSAVEEAATLAQELELRGALVERNGEVVTTVWRASPADHPQMWDEREFPELRFFLRAWAGLNAARQLVVLEERPIAC*
Ga0079220_106569842	3300006806	Agricultural Soil	MPAEAVATARAYKMTLRVSAVEEAATLAHELELRGALVEQNGEVVTTVWRASEADHPQMWDEREFPELRFFLRAWAGLNAARQLVVLDERPIACG*
Ga0105240_110199172	3300009093	Corn Rhizosphere	MTVRVSAVEEAAMLAQELELRGALVERNGDVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS*
Ga0105240_110265621	3300009093	Corn Rhizosphere	ALVERNGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0105245_115105292	3300009098	Miscanthus Rhizosphere	LEMRGALVERHGEIVTTVWRASEADHPQLWEEHEFPELRFFLRSWAGLNAARQLVVLDERPIAS*
Ga0105241_109077151	3300009174	Corn Rhizosphere	GEVVTTVWRASDADHPESWDEREFPELRFFLRAWAGGNAARQLVVLDERPLAC*
Ga0105237_119555581	3300009545	Corn Rhizosphere	LESRGALVERDGEVVTAVWQASEADHPQLWEEREFPELRFFLRAWAGDIAGRQLVVLEERPIAC*
Ga0105238_123264281	3300009551	Corn Rhizosphere	RVSAAEEAAMLAQELEIRGALVERNGEVVTTVWRASEADHPHMWDEHEFPELRFFLRAWAGDIAGRQLVVLDERPIAS*
Ga0134125_118618631	3300010371	Terrestrial Soil	MTIRVSAAEEAAMLAQELEIRGALVERNGEVVTTVWRAAEADHPHMWDEREFPELRFFLRAWAGDIPGRQLVVLDERPIAS*
Ga0134128_110822121	3300010373	Terrestrial Soil	MPAKAVAAARAYKMTLRVSAAEEAAMLAQELELRGALVERNGDVVTAVWRASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS*
Ga0105239_113298272	3300010375	Corn Rhizosphere	LAQELELRGALVERNGEVVTTVWRASAADHPQMWDEREFPELRFFLRAWAGVKAARQLVVLDERPIAC*
Ga0105239_123176022	3300010375	Corn Rhizosphere	MPAEAAAPPRAYKMTLRVSAADEAATLAQELELRGALVERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAGVAAARQPG
Ga0134127_106366882	3300010399	Terrestrial Soil	RGALVERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAGVAAARQLVVLEERPIAC*
Ga0134127_115615711	3300010399	Terrestrial Soil	MPAEAVATTRAYKMIIRVSSPSEAATLAQELETLGALVEREGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0120159_10415742	3300012014	Permafrost	MPAEAVAPVRAYLMTLRVSAVDEAASLARELELRGASVERDGEVVTSVWRVSDADHPHLWDERDFPELRFFLRAWAGAKAARQLVVLDERPIAC*
Ga0120139_10987022	3300012019	Permafrost	MTAEVVAPVRAYLMTLRVSAVDEAASLARELELRGASVERDGEVVTSVWRVSDADHPHLWDERDFPELRFFLRAWAGVKAARQLVVLDERPIAC*
Ga0164298_104810312	3300012955	Soil	EAVATARAYKMTIRVSSPEEAATLAQELETLGALVERHGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0164301_102380051	3300012960	Soil	MPAEAVATARAYQMTIRVSSPEEAATLAQELETLGALVERDGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0164304_118116392	3300012986	Soil	TLRVSAVEEAATLAQELESRGAVVERDGEVVTSIWRASEADHPQLWDEREFTELRFFLRAWAGAHAARQLVVLEERPIAC*
Ga0157371_114268151	3300013102	Corn Rhizosphere	AVEEAATLAQELELRGALVERNGEVVTTVWRASAADHPQMWDEREFPELRFFLRAWAGVKAARQLVVLDERPIAC*
Ga0157370_100213731	3300013104	Corn Rhizosphere	AAAPPRAYKMTLRVSAADEAATLAQELELRGALVERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAGVAAARQLVVLEERPIAC*
Ga0157370_101916591	3300013104	Corn Rhizosphere	MTVRVSAVEEAATLAQELELRGALVERNGEVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPI
Ga0157370_112496982	3300013104	Corn Rhizosphere	MTVRVSAVEEAAMLAQELELRGALVERNGEVVTAVWRASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS*
Ga0157370_119694822	3300013104	Corn Rhizosphere	CSMPAKAVAAARAYKMTLRVSAAEEAAMLAQELEIRGALVERNGEVVTTVWRASAADHPQQWDEREFPELRFFLRAWAGANAARQLVVLDERPVAC*
Ga0157369_1001609611	3300013105	Corn Rhizosphere	MTVRVSAVEEAAMLAQELELRGALVERNGEVVTAVWRASEADHPHLWDELEFPELRFFLRAWAGDDAARQLVVLDERPIAS*
Ga0157374_111183911	3300013296	Miscanthus Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLARELETLGALVERHGAVVTTVWRASPADHPHLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC*
Ga0157374_116729792	3300013296	Miscanthus Rhizosphere	MPAEAVVGARAYKMTLRVSAVEEAERLARELELRGALVEQDGEVVTTVWRASEADHPESWDEREFPELRFFLRAWAGGNAARQLVVLDERPLAC*
Ga0157372_101229963	3300013307	Corn Rhizosphere	MTVRVSAVEEAAMLAQELELRGALVERNGDVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDDAARQLVVLDERPIAS*
Ga0120158_100327342	3300013772	Permafrost	MPAEAVAPVRAYLMTLRVSAIDEAASLARELELRGASVERDGEVVTSVWRVSDADHPHLWDERDFPELRFFLRAWAGAKAARQLVVLDERPIAC*
Ga0120135_10312662	3300014054	Permafrost	VELELRGALVERNGEVVTTVWRISEADHPQLWDEREFPELRFFLGAWAGGTAARQLVVLEERPIAC*
Ga0120149_10803562	3300014058	Permafrost	LRVSAVDEAASLARELELRGASVERDGEVVTSVWRVSDADHPHLWDERDFPELRFFLRAWAGAKAARQLVVLDERPIAC*
Ga0182008_103153412	3300014497	Rhizosphere	MPAEALVGARAYKMTLRVSAVEEAETLAHELELRGALVEQHGEVVTTVWRASDADHPESWDEREFPELRFFLRAWAGGNAARQLVVLDERPLAC*
Ga0132258_123927242	3300015371	Arabidopsis Rhizosphere	VAPLRAYLMTLRVSAAEEAAALAQELEQRGASVQRYGEVVTSVWRASDADHPDLWDEHDFPELRFFLRAWAGVNAARQLVVLDERPIAC*
Ga0066669_121474801	3300018482	Grasslands Soil	MPAEAVVPVRAYLMTLRVSAVEEAAGLAQELELRGASVERDGEVVTSVWRVSDADHPHLWDERDFPELRFFLRAWAGANAARQLVVLDERPIAC
Ga0197907_105375892	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MPAEAAAPPRAYKMTLRVSAADEAATLAQELELRGALVERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAGVAAARQLVVLEERPIAC
Ga0206356_109712542	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAHELETLGALVERHGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC
Ga0206353_105916922	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MLAQELELRGALVERNGDVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS
Ga0206353_111293412	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	EVVAPARAYKMTLRVSAVEEAATLAQELELRGALVERNGEVVTTVWRASAADHPQMWDEREFPELRFFLRAWAGVKAARQLVVLDERPIAC
Ga0224712_105073372	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAHELETLGALVERHGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVL
Ga0224712_105331412	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MLAQELELRGALVERNGEVVTAVWRASEADHPHLWDELEFPELRFFLRAWAGDDAARQLVVLDERPIAS
Ga0207705_101374763	3300025909	Corn Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAQELETLGALVERNGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC
Ga0207705_102328012	3300025909	Corn Rhizosphere	MPAEAAAPPRAYKMTLRVSAADEAATLAQELELRGALVERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAGVAATRQLVVLEERPIAC
Ga0207707_100061453	3300025912	Corn Rhizosphere	MTLRVSAVDEAAMLAQELELRGALVERNGEVVTTIWRASEADHPHMWDEHEFPELRFFLRAWAGDIAGRQLVVLDERPIAS
Ga0207707_103377702	3300025912	Corn Rhizosphere	MPAEVVAPARAYKMTLRVSAVEEAATLAQELELRGALVERNGEVVTTVWRASAADHPQMWDEREFPELRFFLRAWAGVKAARQLVVLDERPIAC
Ga0207695_103254642	3300025913	Corn Rhizosphere	MLAQELELRGALVERNGEVVTTVWRVSEADHPHMWDEREFPELRFFLRAWAGAIAGRQLVVLDERPIAS
Ga0207660_102209342	3300025917	Corn Rhizosphere	MLAQELELRGALVERNGDVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDDAARQLVVLDERPIAS
Ga0207660_110142191	3300025917	Corn Rhizosphere	MPAKAVAAARAYKMTLRVSAAEEAATLAQELEIRGALVERNGEVVTTVWRASAADHPQQWDAREFPELRFFLRAWAGANAARQLVVLDERPV
Ga0207660_110767552	3300025917	Corn Rhizosphere	MPAEVAAPARAYKMTLRVSAVEEAATLAQELELRGALVERNGEVVTTVWRASAADHPQMWDEREFPELRFFLRAWAGVKAARQLVVLDERPIAC
Ga0207657_1001093810	3300025919	Corn Rhizosphere	MLAQELELRGALVERNGEVVTAVWRASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS
Ga0207657_100265503	3300025919	Corn Rhizosphere	MPADTVALARAYKMTLRVSAVEEAAALAEALESRGALVERDGEVVTAVWQASEADHPQLWDEREFPELRFFLRAWAGVNAARQLVVLEERPIAC
Ga0207657_102448462	3300025919	Corn Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAQELETLGALVERNGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGGNAARQLVVLDERPIAC
Ga0207649_100282174	3300025920	Corn Rhizosphere	MTVRVSAVEEAATLAQELELRGALVERNGEVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS
Ga0207652_100746002	3300025921	Corn Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAHELETLGALVERHGAVVTTVWRASPADHPQLWDEREFPELRFFLRAWAGGNAARQLVVLDERPIAC
Ga0207652_111735271	3300025921	Corn Rhizosphere	MPAEAAAPPRAYKMTLRVSAAEEAATLAQELEIRGALVERNGEVVTTVWRASAADHPQQWDEREFPELRFFLRAWAGANAARQLVVLDERPVAC
Ga0207694_104796501	3300025924	Corn Rhizosphere	HELPRGALVERNGDVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS
Ga0207664_102085752	3300025929	Agricultural Soil	MPAEALATARAYTMTLRVSAVEEAETLAHELESRGALVEQDGEVVTTVWRASEADHPESWDEREFPELRFFLRSWAGVKAARQLVVLDERPIALLKGA
Ga0207690_109812191	3300025932	Corn Rhizosphere	MPADTVALARAYKMTLRVSAVEEAAVLAEALESRGALVERDGEVVTAVWQASEADHPQLWEEREFPELRFFLRAWAGVNAARQLVVLEERPIAC
Ga0207661_104226701	3300025944	Corn Rhizosphere	AYKMTIRVSAAEEAAMLAQELEIRGALVERNGEVVTTVWRASEADHPHMWDEREFPELRFFLRAWAGDNAARQLVVLDERPIAS
Ga0207679_120293981	3300025945	Corn Rhizosphere	MTLRVSAVDEAAMLAQELELRGALVERNGEVVTTIWRASEADHPHMWDEHEFPELRFFLRAWAGDIAGRQLVVL
Ga0207667_102423422	3300025949	Corn Rhizosphere	MTLRVSAVDEAAMLAQELELRGALVERNGEVVTTIWRASEADHPHMWDEHEFPELRFFLRAWAGVNAARQLVVLEERPIAC
Ga0207667_107594271	3300025949	Corn Rhizosphere	MPADTVALARAYKMTLRVSAVEEAAALAEALESRGALVERDGEVVTAVWHASEADHPQLWDEREFPELRFFLRAWAG
Ga0207639_103091172	3300026041	Corn Rhizosphere	MPAEVVAPARAYKMTLRVSAVEEAATLAQELELRGAPVERNGEVVTTVWRASAADHPQMWDEREFPELRFFLRAWAGVKAARQLVVLDERPIAC
Ga0207639_104347822	3300026041	Corn Rhizosphere	MPADTVALARAYKMTLRVSAVEEAAALAEALESRGALVERDGEVVTAVWHASEADHPQLWDEREFPELRFFLRAWAGVNAARQLVVLEERPIAC
Ga0207678_102886153	3300026067	Corn Rhizosphere	MTVRVSAVEEAATLAQELELRGALVERNGEVVAAVWHASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS
Ga0207702_103477391	3300026078	Corn Rhizosphere	ERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAGVAAARQLVVLEERPIAC
Ga0207702_108429241	3300026078	Corn Rhizosphere	MPAEAVATARAYKMTIRVSSPEEAATLAHELETLGALVERHGAVVTTVWRASPADHPHLWDEREFPELRFFLRAWAGANAARQLVVLDERPIAC
Ga0207702_118451502	3300026078	Corn Rhizosphere	MPAEAAAPPRAYKMTLRVSAADEAATLAQELELRGALVERKGEVVTTVWRASEADHPELWDEHEFPELRFFLRAWAGVAAARQLVVLE
Ga0308175_1000596973	3300031938	Soil	MPAKAVAAARAYKMTLRVSAAEEAATLAQELEIRGALVERDGEVVTTVWRASAADHPQQWDEREFPELRFFLRAWAGANAARQLVVLDERPVAC
Ga0308176_112829451	3300031996	Soil	ELEMLGALVERRGEIVTTVWRASPADHPHLWDEREFPELRFFLRAWAGDKATRQLVVLDERPIAC
Ga0308176_123924272	3300031996	Soil	MPAKAVAAARAYKMTLRVSAAEEAATLAQELEIRGALVERDGEVVTTVWRASAADHPQQWDEREFPELRFFLRAWAG
Ga0310811_114110741	3300033475	Soil	EAAMLAQELELRGALVERNGDVVTAVWHASEADHPHLWDELEFPELRFFLRAWAGDNAARQLVVLDERPIAS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093479

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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