Metagenome / Metatranscriptome Family F093606

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093606
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	82 residues
Representative Sequence	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRETVDRYLEADDLDPNGQFDRDRRRAPRREHRG
Number of Associated Samples	90
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	95.28 %
% of genes from short scaffolds (< 2000 bps)	96.23 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.396 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.811 % of family members)
Environment Ontology (ENVO)	Unclassified (24.528 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.679 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.61% β-sheet: 4.88% Coil/Unstructured: 69.51%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07973	tRNA_SAD	3.77
PF01997	Translin	1.89
PF03841	SelA	0.94
PF00591	Glycos_transf_3	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2178	Predicted RNA- or ssDNA-binding protein, translin family	General function prediction only [R]	1.89
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.94

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.40 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.40 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.40 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.51 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	85.85 %
Unclassified	root	N/A	6.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.89 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	84.91 %
Unclassified	root	N/A	6.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.89 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.91 %
Unclassified	root	N/A	6.60 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.94 %
Bifidobacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales	0.94 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.91 %
Unclassified	root	N/A	6.60 %
Bifidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae	0.94 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.91 %
Unclassified	root	N/A	6.60 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.94 %
Bifidobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.91 %
Unclassified	root	N/A	6.60 %
Bifidobacterium minimum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium minimum	0.94 %
Streptomyces aurantiacus group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group	0.94 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	84.91 %
Unclassified	root	N/A	6.60 %
Streptomyces aurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces aurantiacus	0.94 %
Bifidobacterium minimum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium minimum	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10361736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	700	Open in IMG/M
3300003570\|Ga0007418J51697_1061587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	644	Open in IMG/M
3300003577\|Ga0007416J51690_1108422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300003693\|Ga0032354_1078113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	567	Open in IMG/M
3300003693\|Ga0032354_1168004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces aurantiacus	557	Open in IMG/M
3300004798\|Ga0058859_11674284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	563	Open in IMG/M
3300004799\|Ga0058863_11855098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300004803\|Ga0058862_12375248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300005177\|Ga0066690_10871852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300005335\|Ga0070666_11292333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300005436\|Ga0070713_101300543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	705	Open in IMG/M
3300005439\|Ga0070711_101411215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	606	Open in IMG/M
3300005454\|Ga0066687_10737568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300005471\|Ga0070698_101802825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	565	Open in IMG/M
3300005561\|Ga0066699_10216661	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1339	Open in IMG/M
3300005561\|Ga0066699_11053529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	562	Open in IMG/M
3300005578\|Ga0068854_100180942	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1647	Open in IMG/M
3300005617\|Ga0068859_102843672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Bifidobacteriales → Bifidobacteriaceae → Bifidobacterium → Bifidobacterium minimum	531	Open in IMG/M
3300005650\|Ga0075038_11275407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	557	Open in IMG/M
3300005764\|Ga0066903_101358378	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300006032\|Ga0066696_10501767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	796	Open in IMG/M
3300006794\|Ga0066658_10751192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300006797\|Ga0066659_10159358	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300006914\|Ga0075436_100754478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300009137\|Ga0066709_102228175	All Organisms → cellular organisms → Bacteria → Terrabacteria group	754	Open in IMG/M
3300009148\|Ga0105243_10719012	All Organisms → cellular organisms → Bacteria → Terrabacteria group	976	Open in IMG/M
3300009156\|Ga0111538_13092493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M
3300009545\|Ga0105237_11194859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	767	Open in IMG/M
3300010038\|Ga0126315_10910534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300010094\|Ga0127480_1124567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	533	Open in IMG/M
3300010113\|Ga0127444_1091187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	597	Open in IMG/M
3300010121\|Ga0127438_1147497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	709	Open in IMG/M
3300010124\|Ga0127498_1166480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	653	Open in IMG/M
3300010130\|Ga0127493_1153987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300010358\|Ga0126370_11284263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300010376\|Ga0126381_101795213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	885	Open in IMG/M
3300010376\|Ga0126381_104159284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	562	Open in IMG/M
3300011271\|Ga0137393_11323970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300012205\|Ga0137362_11070363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	686	Open in IMG/M
3300012209\|Ga0137379_10594617	Not Available	1013	Open in IMG/M
3300012212\|Ga0150985_102295892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1943	Open in IMG/M
3300012212\|Ga0150985_111576710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300012212\|Ga0150985_113413802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300012212\|Ga0150985_118507595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	598	Open in IMG/M
3300012212\|Ga0150985_121326896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300012356\|Ga0137371_11087356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300012360\|Ga0137375_10809296	Not Available	753	Open in IMG/M
3300012383\|Ga0134033_1004463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300012388\|Ga0134031_1007830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300012389\|Ga0134040_1183964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300012390\|Ga0134054_1156382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300012391\|Ga0134035_1258698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	606	Open in IMG/M
3300012396\|Ga0134057_1019321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300012396\|Ga0134057_1034968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300012403\|Ga0134049_1105417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300012405\|Ga0134041_1338046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300012407\|Ga0134050_1321050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300012410\|Ga0134060_1259167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	557	Open in IMG/M
3300012410\|Ga0134060_1380701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	711	Open in IMG/M
3300012469\|Ga0150984_102493578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	554	Open in IMG/M
3300012469\|Ga0150984_105674473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	781	Open in IMG/M
3300012985\|Ga0164308_11506492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	618	Open in IMG/M
3300013308\|Ga0157375_12570025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	608	Open in IMG/M
3300015372\|Ga0132256_102195626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300015373\|Ga0132257_101589635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	836	Open in IMG/M
3300016341\|Ga0182035_10796373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	829	Open in IMG/M
3300016371\|Ga0182034_12000221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300018465\|Ga0190269_10727108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300019233\|Ga0184645_1006136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300019254\|Ga0184641_1300518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300019279\|Ga0184642_1224529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300019887\|Ga0193729_1121357	Not Available	973	Open in IMG/M
3300020076\|Ga0206355_1389436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300021307\|Ga0179585_1087138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	514	Open in IMG/M
3300021315\|Ga0179958_1100923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	518	Open in IMG/M
3300022467\|Ga0224712_10688240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300022718\|Ga0242675_1109898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300025961\|Ga0207712_12079880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300025981\|Ga0207640_10144676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1738	Open in IMG/M
3300026217\|Ga0209871_1091490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300028104\|Ga0247713_1102569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300028554\|Ga0302047_10933705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300030785\|Ga0102757_11417234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300030829\|Ga0308203_1082679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300030858\|Ga0102759_1002149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300030902\|Ga0308202_1065626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	694	Open in IMG/M
3300030988\|Ga0308183_1145182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M
3300030989\|Ga0308196_1049440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	578	Open in IMG/M
3300030994\|Ga0308153_105604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	701	Open in IMG/M
3300031054\|Ga0102746_11014661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300031058\|Ga0308189_10299119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	628	Open in IMG/M
3300031058\|Ga0308189_10405576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	564	Open in IMG/M
3300031058\|Ga0308189_10409857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	562	Open in IMG/M
3300031058\|Ga0308189_10557642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300031091\|Ga0308201_10388545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300031092\|Ga0308204_10259528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	567	Open in IMG/M
3300031092\|Ga0308204_10277540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300031094\|Ga0308199_1090643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	660	Open in IMG/M
3300031095\|Ga0308184_1048520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300031231\|Ga0170824_111864705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300031421\|Ga0308194_10270941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300031421\|Ga0308194_10339683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.53%
Host-Associated	Host-Associated	25.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.70%
Plants	Host-Associated → Plants	22.64%
Aquatic	Environmental → Aquatic	2.83%
Human	Host-Associated → Human	2.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.38%
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Digestive System	Host-Associated → Human → Digestive System	2.83%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.55%
Loam	Environmental → Terrestrial → Soil → Loam	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.66%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.83%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.66%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.83%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	16.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003570	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_34 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003577	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003693	Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010094	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010113	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010121	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012383	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028104	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-1-E_N	Environmental	Open in IMG/M
3300028554	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (v9)	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030858	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030994	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_142 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031054	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031095	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_158 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_103617362	3300001661	Forest Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRPPRREHRGEEL
Ga0007418J51697_10615872	3300003570	Avena Fatua Rhizosphere	VGRSLKEALLGQFAALQEAGLAPTEVPQEDDTPLVVVESAPRGRTTRPRRESVDRYLEDEDANGQFDRDRRRGPPRRDHRGEGEGVGRDGRRRP
Ga0007416J51690_11084221	3300003577	Avena Fatua Rhizosphere	VGRSLKEALLGQFAALQEAGLAPTEVPQEDDTPLVVVESAPRGRTTRPRRESVDRYLEDEDANGQFDRDRRRGPPRRDHRGEGEGVGRDGRR
Ga0032354_10781132	3300003693	Avena Fatua Rhizosphere	VGRSLKEALLGQFAALQEAGLAPTEVPQEDDTPLVVVESAPRGRTTRPRRESVDRYLEDEDANGQFDRD
Ga0032354_11680041	3300003693	Avena Fatua Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDAPLVVVESAPRGRATRPRRETVDRYLEADDLDPNGQFDRDRRRVPRRDHRGDELGRERRRPGGGGG
Ga0058859_116742841	3300004798	Host-Associated	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFDRDR
Ga0058863_118550981	3300004799	Host-Associated	VGRSLKEALLGQFAALQEAGLAPTEVPQEDDAPLVIVESAPRGRATRPRRDSIDRYLESDDVDPNGFDRDRRRPARREH
Ga0058862_123752481	3300004803	Host-Associated	VARSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFDRDRRK
Ga0066677_107203852	3300005171	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEEEAPLVVVESAPRGRAARPRRESVDRYLEADDLDA
Ga0066690_108718521	3300005177	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEEEAPLVVVESAPRGRAARPRRESVDRYLEADDLDANGQFERRRAPRREHRGE
Ga0070666_112923331	3300005335	Switchgrass Rhizosphere	VGRSLKEALLGQFAALQEAGLAPTEVPQEDETPLVVVESAPRGRTTRPRRESVDRYLEDEDANGQFDRDRRRGPPRRDHRGE
Ga0070713_1013005431	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRETVDRYLEADDIDQNGFDRDRRRGAPRRE
Ga0070711_1014112151	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VARSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFDRDRRKGAPRREHRGEELGRDGRRRPGGVGP
Ga0066687_107375681	3300005454	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDESPLVVVESAPRGRATRPRRESVDRYLEADDLDASGRFDRE
Ga0070698_1018028251	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFERDRRKGA
Ga0066699_102166614	3300005561	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEEEAPLVVVESAPRGRATRARRESVDRYLEADELEGN
Ga0066699_110535291	3300005561	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEEEAPLVVVESAPRGRARPRRESVDRYLESDDLDASGQFERRRA
Ga0068854_1001809421	3300005578	Corn Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRSTRPRRESVDRYLEADDLDPNGQFDRDRRRAPRREHRG
Ga0068859_1028436721	3300005617	Switchgrass Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRPRRESVERYLDADDDPNGQFDRDRRRGTARREHRGAEGEVGRDGRRRPGGPNAAGRARGRGRPCEFEAELLPG
Ga0075038_112754071	3300005650	Permafrost Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRSRRESVDRYLESDDLDPNGQFDRDRRKGAPRREHRGEEIG
Ga0066903_1013583781	3300005764	Tropical Forest Soil	VGRSLKEALLGQFAALQEAGLAPTEVPQEDETPLVVVESAPRGRTARPRRESVDRYLEDEDANGQFDRDRRRGPPRRDHRG
Ga0066696_105017671	3300006032	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEEEAPLVVVESAPRGRATRPRRETVDRYLETDDLDPNGAFDRDRRRAPRREH
Ga0066658_107511922	3300006794	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEEEAPLVVVESAPRGRATRARRESVDRYLEADELEGNGQFERDRRRPPRR
Ga0066659_101593584	3300006797	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDESPLVVVESAPRGRATRPRRESVDRYLEADDLDASGRFDRESRRAPRREHRGEEL
Ga0075436_1007544781	3300006914	Populus Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRETVDRYLEADDLDPNGQFDRDRRRAPRREHRG
Ga0066709_1022281753	3300009137	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRESVDRYLEADDLDANGQFD
Ga0105243_107190121	3300009148	Miscanthus Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLIVVESAPRGRSTRPRRESVDRYLEADDLDPNGQFDRDRRRAPRREHRGEELG
Ga0111538_130924931	3300009156	Populus Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRTARPRRESVDRYLEDEDANGQFDRDRRRGAPRREHRGEGE
Ga0105237_111948592	3300009545	Corn Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFDRDRRKGAP
Ga0126315_109105342	3300010038	Serpentine Soil	VGRSLKEALLGQLGALQEAGLAPSEVPQEEDAPLVVVESAPRGRAARPRRESVDRYLETDDLDPNGQFDRDRRRIPRREHRGEG
Ga0127480_11245672	3300010094	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPRREHRGEE
Ga0127444_10911872	3300010113	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPRREHRGDE
Ga0127438_11474971	3300010121	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPRREHRGDEAGR
Ga0127498_11664801	3300010124	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPRREHRGDEAGRER
Ga0127493_11539871	3300010130	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPRREHRGEEA
Ga0126370_112842631	3300010358	Tropical Forest Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRASRPRRESVDRYLEADDLDPNGQFDRDRRRGAPRREHRGDEL
Ga0126381_1017952131	3300010376	Tropical Forest Soil	VGRSLKEALLGQFAALQEAGLAPTEVPQEDEAPLVVVESAPRGRAARPRRESVDRYLEADDLDANGQ
Ga0126381_1041592842	3300010376	Tropical Forest Soil	VGRSLKEALLGQYAALQEAGLMPTEVPQEDDTPLVVVESAPRGRATRARRESVDRYLETDDLDANGFDRDRRRG
Ga0137393_113239701	3300011271	Vadose Zone Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRPRRESVDRYLEADDLDANGRFDRESRRAPRR
Ga0137362_110703632	3300012205	Vadose Zone Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFDRDRRKGAPRREH
Ga0137379_105946173	3300012209	Vadose Zone Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRAP
Ga0150985_1022958924	3300012212	Avena Fatua Rhizosphere	VGRSLKEALLGQFAALQEAGLAPTEVPQEDDTPLVVVESAPRGRTTRPRRESVDRYLEDEDANGQFD
Ga0150985_1115767101	3300012212	Avena Fatua Rhizosphere	VGQSLKEALLSQYAALQEAGLAPTEMPQEDDAPLVVVESAPRGRATRPRREAVDRYLESEDLDNGFDRDR
Ga0150985_1134138023	3300012212	Avena Fatua Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDTPLIVVESAPRGRTTRPRRESVDRYLEDEDANGQFDRDRRRG
Ga0150985_1185075951	3300012212	Avena Fatua Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDAPLIIVESAPRGRATRPRRESVDRYLESDDDPNGAFDRDRRR
Ga0150985_1213268962	3300012212	Avena Fatua Rhizosphere	VGRSLKEALLGQFAALQEAGLAPTEVPQEDETPLVVVESAPRGRAARPRRESVDRYLETDDLDSNGFDRDRRRLP
Ga0137371_110873561	3300012356	Vadose Zone Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEEEAPLVVVESAPRGRATRPRRETVDRYLETDDLDPNGAFDRDRRRAPRREHRGEE
Ga0137375_108092961	3300012360	Vadose Zone Soil	VGRSLKEALLGQFAALQEAGLAPTEVPQEDDAPLVVVESAPRGRATRPRREAMDRYLEAEDLDANGQ
Ga0134033_10044631	3300012383	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPRREHRGDEAGRE
Ga0134031_10078303	3300012388	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRETVDRYLETDELDANGQFDRDRRRGAPRRE
Ga0134040_11839642	3300012389	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRR
Ga0134054_11563822	3300012390	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPRRE
Ga0134035_12586982	3300012391	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPQAGCPSNS*
Ga0134057_10193212	3300012396	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPR
Ga0134057_10349681	3300012396	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFERDRRKGAPRREH
Ga0134049_11054171	3300012403	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDAPLVVVESAPRGRATRPRRESVDRYLESDDDPNGQFDRDRRRGPRREHRGDELG
Ga0134041_13380462	3300012405	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRL
Ga0134050_13210501	3300012407	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFERDRRKGAPRREHRGEELGRDGRRRPGGAFP
Ga0134060_12591671	3300012410	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFERDRRKGAPRREHRGEELGRDGRRRPGGAFPGGS
Ga0134060_13807013	3300012410	Grasslands Soil	VGRSLKEALLGQYAALQEAGLAPTEVPPEEESPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPRR
Ga0150984_1024935782	3300012469	Avena Fatua Rhizosphere	VGRSLKEALLGQFAALQEAGLAPTEVPQEDETPLVVVESAPRGRAARPRRESVDRYLETDDLDSNGFDRDRRRLPRREHRG
Ga0150984_1056744733	3300012469	Avena Fatua Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDSPLVVVESAPRGRATRPRRDTVDRYLEAEDLDANGFDRD
Ga0164308_115064922	3300012985	Soil	VGRSLKEALLGQYAALQEAGLAPAEVPQEDDAPLIIVESAPRGRATRPRRESVDRYLESDDDPNGAFDRDRRRGVPRRDHRGDELG
Ga0157375_125700252	3300013308	Miscanthus Rhizosphere	VGRSLKEALLGQFAALQEAGLAPSEMPQEDETPLVVVESAPRGRTTRPRRESVDRYLEDEDANGQFDRDRRRGPPRRDHRGADEGAG
Ga0132256_1021956262	3300015372	Arabidopsis Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRTARPRRESVDRYLEDEDANGQFDRDRRRGAPRREHRGEGEGAGGRDRRRGGPN
Ga0132257_1015896353	3300015373	Arabidopsis Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRTARPRRESVDRYLEDEDANGQFDRDRRPGAP
Ga0182035_107963731	3300016341	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRETVDRYLESDDMDSNGFDRDRRRGAPRREH
Ga0182034_120002211	3300016371	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRETVDRYLETDDLDSNGFDRDRRRGAPR
Ga0190269_107271081	3300018465	Soil	VGRSLKEALLDQYALLQERGLAPAEMPPDEEAPLIVVESAARGRASRPRRESLDRFTEREDEASLDVNGQFDKDRRRAPRRDLLRGDDPRDRRRPGAGPAGPR
Ga0184645_10061362	3300019233	Groundwater Sediment	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRPRRESVERYLDADDDPNGQFDRDRRRGTARREH
Ga0184641_13005181	3300019254	Groundwater Sediment	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRSTRPRRESVDRYLEADDLDANGRFDRESRRAPRREHRGEELG
Ga0184642_12245291	3300019279	Groundwater Sediment	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRPRRESVERYLDADDDPNGQFDRDRRRGTARREHRGAEGEVG
Ga0193729_11213571	3300019887	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQ
Ga0206355_13894362	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	VGRSLKEALLGQFAALQEAGLAPTEVPQEDDAPLVIVESAPRGRATRPRRDSIDRYLESDDVDPNGFDRDRRRPARREHRGGEE
Ga0179585_10871381	3300021307	Vadose Zone Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEEEAPLVVVESAPRGRATRARRESVDRYLEADELEGNGQFERDRR
Ga0179958_11009231	3300021315	Vadose Zone Soil	VARSLKEALLGQYAALQEAGLAPTEVPLEDEAPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFDRDRRKGAPRREHRGEELGRD
Ga0213874_100694451	3300021377	Plant Roots	VGRSLKEALLGQFAALQEAGLAPTEVPQEDEAPLVVVESAPRGRARPRRESVDRYLEADDLDNGF
Ga0224712_106882401	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRDSVDRYLETEDLDANGFDRDRRRGVPRRDHRGDELGRERR
Ga0242675_11098981	3300022718	Soil	VGRSLKEALLGQYAALQEAGLMPTEVPQEDDTPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQSDRDR
Ga0207712_120798801	3300025961	Switchgrass Rhizosphere	VGRSLKEALLGQYAALQEAGLAPSEMPQEDDAPLVVVESAPRGRATRPRREAVDRYLETEDLDANGFDRDRRRLPRREHRGDEL
Ga0207640_101446764	3300025981	Corn Rhizosphere	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRSTRPRRESVDRYLEADDLDPNGQFDRDRRRAPRREHRGEELGRDGRGRPGASG
Ga0209871_10914901	3300026217	Permafrost Soil	MCRAEGEEFDGLQGERVGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRSRRESVDRYLESDDLDPNGQFDRDRRKGAPRREHRG
Ga0209465_104424991	3300027874	Tropical Forest Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRETVDRYLESDDLDS
Ga0247713_11025691	3300028104	Soil	VGRSLKEALLDQFALLQERGLAPSEMPQDDESPLIVVETAPRGRSTRVRRESVDRYSEREDEIEANGQFNRDRRRPLPRREHGVDE
Ga0302047_109337051	3300028554	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLIVVESAPRGRATRPRRESVDRYLEADDLDPNGFDRDRRRPPRRDHRGD
Ga0102757_114172341	3300030785	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDAPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRLPRRDHRGDEAGRER
Ga0308203_10826791	3300030829	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRPRRESVERYLDADDDPNGQFDRDRRRGTARREHRGAEGEAGRDGRRRPGGPN
Ga0102759_10021491	3300030858	Soil	VARSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFDRDRRKGAPRREH
Ga0308202_10656263	3300030902	Soil	VGRSLKEALLGQYAALQEAGLAPAEVPQEDDAPLIIVESAPRGRATRPRRESVDRYLESDDDPNGAFDRDRRRGVPRRDHRGDELGRERRRPIGGPGARGRGRGRPGEF
Ga0308183_11451821	3300030988	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDAPLIIVESAPRGRATRPRRESVDRYLESDDDPNGAF
Ga0308196_10494401	3300030989	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRRAPRREHRGEEL
Ga0308153_1056041	3300030994	Soil	VGRSLKEALLGQYAALQEAGLAPAEVPQEDDAPLIIVESAPRGRATRPRRESVDRYLESDDDPNGAFDRDRRRGVPRRDHRGDELGRERRRPIGGPGARGRLRGRPGEFDQDFGAPAGYK
Ga0102746_110146611	3300031054	Soil	VARSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFDRDRRKGAPRREHRGEELGRDGRRRP
Ga0308189_102991191	3300031058	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRPRRESVERYLDSDDDPNGQFDRDRRRGTARREHRGAEGEVGRDGR
Ga0308189_104055761	3300031058	Soil	VGRSLKEALLGQYAALQEAGLAPAEVPQEDDAPLIIVESAPRGRATRPRRESVDRYLESDDDPNG
Ga0308189_104098572	3300031058	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDAPLVVVESAPRGRATRPRRDSVDRYLESEDLDANGFDRDRRRLPRRDHQ
Ga0308189_104593132	3300031058	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDAPLVVVESAPRGRATRPRREAVDRYLEAEDLDA
Ga0308189_105576421	3300031058	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRESVDRYLEADDLDPNGQFDRDRRKGAPRREHRGEE
Ga0308201_103885451	3300031091	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRSRRESVDRYLEADDLDPNGQFDRDRRKGAPRREHRGEELGRDG
Ga0308204_102595282	3300031092	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDDAPLIIVESAPRGRATRPRRESVDRYLESDDDPNGAFDRDRRRGVP
Ga0308204_102775401	3300031092	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRPRRESVERYLDADDDPNGQFDRDRRRGTARREHRGAEGEVGRDGRR
Ga0308199_10906431	3300031094	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRSRRESVDRYLEADDLDPN
Ga0308184_10485201	3300031095	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRPRRESVERYLDADDDPNGQ
Ga0170824_1118647052	3300031231	Forest Soil	VGRSLKEALLGQFAALQEAGLAPTEMPQDDETPLVVVESAPRGRTTRPRRESVDRYLEDEDANGQFDRDRRRGPPRRDHRGEG
Ga0308194_102709411	3300031421	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDETPLVVVESAPRGRATRPRRESVDRYLETDDLDPNGQFDRDRRKGAPRREHRGDEH
Ga0308194_103396831	3300031421	Soil	VGRSLKEALLGQYAALQEAGLAPTEVPQEDEAPLVVVESAPRGRATRPRRESVDRYLEGDDLDSNGRFDRENRRAPRREHRGEEVGGRERRRPGSGSGSSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093606

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences